Anaerobic Transformation of Furfural by Methanococcus deltae (Delta)LH

Methanococcus deltae (Delta)LH was grown on H(inf2)-CO(inf2) in the presence of various concentrations of furfural. Furfural at higher concentrations, namely, 20 and 25 mM, inhibited growth of this organism. At concentration of 5 and 10 mM, no inhibition of growth was observed. The other methanogens in this study were not inhibited by 10 mM furfural. Among the methanogens tested, M. deltae was capable of transforming furfural, whereas Methanobacterium thermoautotrophicum Marburg, Methanosarcina barkeri 227, Methanococcus thermolithotrophicus, and Methanobrevibacter ruminantium lacked this capability. One hundred percent removal of furfural was observed within 48 h of incubation in M. deltae cultures. The end product observed during furfural metabolism was furfuryl alcohol. An almost stoichiometric amount of furfuryl alcohol was produced by M. deltae. This transformation is likely to be of value in the detoxification of furfural and in its ultimate conversion to methane and CO(inf2) by anaerobic digestion.     

Spirulina (Arthrospira): potential application as an animal feed supplement

Spirulina has been used as human food supplement for over 20 years, but its use as an animal feed supplement is relatively recent. This paper reviews earlier studies on its more established effects on growth, survival and tissue quality in a whole range of animals and more recent studies on its immunomodulatory, anti-viral and anti-cancer effects. The basis for potential application as an animal feed supplement is discussed.     

Current knowledge on potential health benefits of Spirulina

Spirulina is a microscopic filamentous alga that is rich in proteins, vitamins, essential amino acids, minerals and essential fatty acids like γ-linolenic acid (GLA). It is produced commercially and sold as a food supplement in health food stores around the world. Up to very recently, the interest in Spirulina was mainly in its nutritive value. Currently, however, numerous people are looking into the possible therapeutic effects of Spirulina. Many pre-clinical studies and a few clinical studies suggest several therapeutic effects ranging from reduction of cholesterol and cancer to enhancing the immune system, increasing intestinal lactobacilli, reducing nephrotoxicity by heavy metals and drugs and radiation protection. This paper presents a critical review of some published and unpublished data on therapeutic effects of Spirulina.     

Seasonal variation in phytoplankton primary production in relation to light and nutrients in Lake Awasa,Ethiopia

The biomass and primary production of phytoplankton in Lake Awasa, Ethiopia was measured over a 14 month period, November 1983 to March 1985. The lake had a mean phytoplankton biomass of 34 mg chl a m^–3 (n = 14). The seasonal variation in phytoplankton biomass of the euphotic zone (mg chl a m^–2 h^–1) was muted with a CV (standard deviation/mean) of 31%. The vertical distribution of photosynthetic activity was of a typical pattern for phytoplankton with light inhibition on all but overcast days. The maximum specific rates of photosynthesis or photosynthetic capacity (Ø_max) for the lake approached 19 mg O₂ (mg chl a)^–1 h^–1, with high values during periods of low phytoplankton biomass. Areal rates of photosynthesis ranged between 0.30 to 0.73 g O₂ m^–2 h^–1 and 3.3 to 7.8 g O₂ m^–2 d^–1. The efficiency of utilisation of PhAR incident on the lake surface varied from 2.4 to 4.1 mmol E^–1 with the highest efficiency observed corresponding to the lowest surface radiation. Calculated on a caloric basis, the efficiency ranged between 1.7 and 2.9%. The temporal pattern of primary production by phytoplankton showed limited variability (CV = 21 %).     

Occurrence of beta-glutamate, a novel osmolyte, in marine methanogenic bacteria

The unusual compound beta-aminoglutaric acid (beta-glutamate) has been identified by 13C nuclear magnetic resonance spectroscopy in soluble extracts of marine methanogenic bacteria. We examined several methanogen species representing nine genera and found that beta-glutamate occurred in methanococci and two methanogenium strains (Methanogenium cariaci JR1 and "Methanogenium anulus" AN9). The presence of this compound in the methanococci examined was further restricted to thermophilic members of the genus Methanococcus, including Methanococcus thermolithotrophicus strains, Methanococcus jannaschii, and "Methanococcus igneus." The two Methanogenium strains examined were mesophiles. Studies using Methanococcus thermolithotrophicus showed that levels of beta-glutamate in cells of that species were not affected by variation in growth temperature (40 to 65 degrees C), NH4+ (2 to 80 mM), Mg2+ (10 to 50 mM), or K+ (2 to 10 mM) in the medium. In contrast, soluble pools of beta-glutamate and L-alpha-glutamate (the other major free amino acid in all the methanococci) were proportional to NaCl levels in the growth medium. This dependence of beta-glutamate and L-alpha-glutamate concentrations on salt levels in the medium suggests that they function as osmolytes in these cells.     

Species composition and seasonal abundance of zooplankton in two Ethiopian Rift Valley lakes — Lakes Abiata and Langano

The composition and annual cycle of the zooplankton of two Ethiopian Rift Valley soda lakes is described. Lake Langano has a conductivity of 1 400 to 1800 µS cm^–1 and a permanent mineral turbidity. Lake Abiata is more concentrated (conductivity 19 000 to 23 000 µS cm^–1) and more alkaline but less turbid; it is characterised by dense phytoplankton blooms, mainly cyanophytes.The zooplankton assemblage is typically tropical, with relatively few species of Cladocera and Copepoda. There was a marked difference in zooplankton between the two lakes, Lake Abiata showing much higher concentrations and greater wet season/ dry season differences. The species composition was also different. Lake Abiata lacked Cladocera, and calanoid copepods occurred only during the wet season with lower conductivities. These two phenomena were attributed to high sodium bicarbonate concentration and to dense cyanophyte blooms. Eleven species of rotifers occurred in Lake Abiata, including six Brachionus spp. but B. rubens was the only rotifer found in Lake Langano. The seasonal variation of the zooplankton is discussed in relation to seasonal fluctuations in conductivity and Chl a concentration.     

Species composition and phytoplankton biomass in a tropical African lake (Lake Awassa,Ethiopia)

The species composition and phytoplankton biomass of Lake Awassa, Ethiopia were studied from September 1985 to July 1986 in relation to some limnological features of the lake. During the study period, three phases of thermal stratification were recognized: a period of unstable stratification and near-complete mixing was followed by a stable stratification period and another period of complete mixing. Complete mixing was associated with cooling of air temperature with an influx of cool rain and high rainfall. The underwater light penetration showed a similar pattern over the whole period with the highest in the red, and the lowest in the blue spectral region. Euphotic depth varied between 1.6 and 3.0 meters with the highest measurements corresponding to the stable stratification period. PO₄-P concentrations ranged between 23 and 45 µg l^–1 and NO₃-N concentrations varied between 7 and 14 µg l^–1 during the study period. Both nutrients showed increasing values associated with mixing periods and/or the rainy season.A total of 100 phytoplankton species were identified with 48% of the taxa represented by green algae, 30% by blue-green algae, 11% by diatoms, and the rest by chrysophytes, dinoflagellates, cryptomonads and euglenoids. The dominant phytoplankton species were Lyngbya nyassae, Botryococcus braunii and Microcystis species. Seasonal biomass variation was pronounced in the first two species but not in Mycrocystis. Phytoplankton biomass increased following the mixing period in December, and thermal destratification during May to July which was also a period with high rainfall and relatively high nutrient concentration. While the seasonal variation of the total phytoplankton community in Lake Awassa was relatively low (coefficient of variation < 20%), it was higher in some of the individual component species.     

Arthrospira ('Spirulina') strains from four continents are resolved into only two clusters, based on amplified ribosomal DNA restriction analysis of the internally transcribed spacer

We present the results of a phylogenetic study, based on amplified ribosomal DNA restriction analysis of the rDNA operon, of 37 Arthrospira ('Spirulina') cultivated clonal strains from four continents. In addition, duplicates from different culture collections or markedly different morphotypes of particular strains established as clonal cultures were treated as separate entries, resulting in a total of 51 tested cultures. The strain Spirulina laxissima SAG 256.80 was included as outgroup. The 16S rRNA genes appeared too conserved for discrimination of the strains by amplified ribosomal DNA restriction analysis, and thus the internally transcribed spacer was selected as molecular taxonomic marker. The internally transcribed spacer sequences situated between the 16S and the 23S rRNA were amplified by polymerase chain reaction and yielded amplicons of about 540 bp. Direct use of cells for polymerase chain reaction seemed to inhibit the amplification reaction. This was overcome by the design of a crude lysis protocol and addition of bovine serum albumin in the polymerase chain reaction mix. The amplicons were digested with four restriction enzymes (EcoRV, Hhal, Hinfl, Msel) and the banding patterns obtained were analyzed. Cluster analysis showed the separation of all the strains into two main clusters. No clear relationships could be observed between this division into two clusters and the geographic origin of the strains, or their designation in the culture collections, or their morphology.     

Detection of phytoplasma by loop-mediated isothermal amplification of DNA (LAMP)

Napier stunt phytoplasma (16SrXI and 16SrIII) in eastern Africa is a serious threat to the expansion of Napier grass (Pennisetum purpureum) farming in the region, where it is widely cultivated as fodder in zero grazing livestock systems. The grass has high potential for bio-fuel production, and has been adopted by farmers as a countermeasure to cereal stem borer Lepidoptera, since it attracts and traps the insect. Diagnosis of stunt phytoplasma have been largely by nested polymerase chain reaction (nPCR) targeting the 16S rRNA gene. However, the method is laborious, costly and technically demanding. This investigation has developed a simpler but effective phytoplasma diagnostic tool, called; loop-mediated isothermal amplification of DNA (LAMP). The assay was tested on 8 symptomatic and 8 asymptomatic plants, while its detection limit was compared to nested PCR using samples serially diluted from 3 ng/μl to 0.38 pg/μl. Molecular typing of LAMP products was determined by BsrI restriction digestion and Southern blot analysis. The assay sensitivity, positive and negative predictive values were estimated, while the specificity was tested on 11 phytoplasma groups. LAMP was specific to 5 phytoplasma groups: 16SrVI, X, XI and XVI. BsrI restriction digestion produced two predicted fragments, and there was specific binding of probe DNA to the LAMP amplicons in Southern blot analysis. The assay sensitivity was 100%, while the positive and negative predictive values were 63 and 100% respectively. LAMP was 20-fold more sensitive than nested PCR. This study validates LAMP for routine diagnosis of Napier stunt and other closely related phytoplasmas.