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111.
Nadia Tinto Arturo Cola Chiara Piscopo Marina Capuano Martina Galatola Luigi Greco Lucia Sacchetti 《PloS one》2015,10(9)
Background
Celiac disease (CD) has a strong genetic component mainly due to HLA DQ2/DQ8 encoding genes. However, a minority of CD patients are DQ2/DQ8-negative. To address this issue, we retrospectively characterized HLA haplotypes in 5,535 subjects at risk of CD (either relatives of CD patients or subjects with CD-like symptoms) referred to our center during a 10-year period.Methods
We identified loci DQA1/DQB1/DRB1 by sequence-specific oligonucleotide-PCR and sequence-specific primer-PCR; anti-transglutaminase IgA/IgG and anti-endomysium IgA by ELISA and indirect immunofluorescence, respectively.Results
We diagnosed CD in 666/5,535 individuals, 4.2% of whom were DQ2/DQ8-negative. Interestingly, DQ7 was one of the most abundant haplotypes in all CD patients and significantly more frequent in DQ2/DQ8-negative (38%) than in DQ2/DQ8-positive CD patients (24%) (p<0.05).Conclusion
Our data lend support to the concept that DQ7 represents an additive or independent CD risk haplotype with respect to DQ2/DQ8 haplotypes but this finding should be verified in other large CD populations. 相似文献112.
113.
Eliana M. Cancello Rogério R. Silva Alexandre Vasconcellos Yana T. Reis Luís M. Oliveira 《Biotropica》2014,46(4):441-450
In this study, we investigated the termites of the Brazilian Atlantic Forest, one of the most threatened biodiversity hotspots in the world, in regularly spaced sites from 7° S to 27° S latitude. To our knowledge, this is the only report of a latitudinal survey of termites at species level performed with a standardized sampling protocol. We evaluate termite diversity and abundance, and describe patterns of species composition based on feeding groups along the latitudinal gradient. We also describe the relative contribution of environmental variables to explain diversity patterns. Termite assemblages were investigated by standardized surveys at 15 Atlantic Forest sites, on six transects divided into five sections of 10 m², with 30 sections per site (or 300 m²/site), which were investigated by one trained person for one hour. Observed species richness and abundance were negatively correlated with latitude. The influence of latitude was explained mainly by variables related to temperature, precipitation and ambient energy (potential evapotranspiration). Our results also suggest that temperature exerts a greater constraint on Atlantic Forest termites than productivity, because ambient productivity increases with latitude in this forest but termite diversity decreases. Termite species richness in the Atlantic Forest showed a different pattern than those described for other organisms, increasing in diversity where the coastal‐forest strip narrows. Overall, our results indicate comparatively high termite species richness at northeastern sites and a significant impoverishment of termite assemblages in the southeastern and southern regions of the Atlantic Forest. 相似文献
114.
Maurício Papa de Arruda Evonnildo Costa Gonçalves Maria Paula Cruz Schneider Artur Luiz da Costa da Silva Eliana Morielle-Versute 《Molecular biology reports》2010,37(4):2031-2036
We proposed a modification the procedure of genotyping based in labeled universal primer and tailed primer. In the standard
protocol, three primers are used in the same PCR reaction, a forward primer with tail added at the 5′ end of the identical
sequence to labeled universal primer with dye-fluorescent and a reverse primer. Unfortunately, the choice of a labeled primer
characterized by a large number of complementary sequences in target genomes (which is more probable in larger genomes) result
in unspecific amplifications (false positive) can cause absence or decrease amplification of the locus of interest and also
false interpretation of the analysis. However, identification of possible homologies between the primer chosen for labelling
and the genome is rarely possible from the available DNA data bases. In our approach, cycling is interrupted for the addition
of the labeled primer only during the final cycles, thus minimizing unspecific amplification and competition between primers,
resulting in the more fidelity amplification of the target regions. 相似文献
115.
Corrente M Franchini D Decaro N Greco G D'Abramo M Greco MF Latronico F Crovace A Martella V 《The new microbiologica》2010,33(4):337-341
Brucella spp. is a worldwide zoonotic pathogen. Infection by Brucella canis in dogs is endemic in the Southern USA and in Central and South America, but it appears sporadically in other parts of the world, including Europe. Tissue samples from a dog with chronic prostatitis, discospondylitis and locomotor problems were subjected to clinical and laboratory examinations. B. canis was detected by PCR in biological fluids and tissues of the animal, while antibodies to B. canis were found in the serum, providing additional strong evidence for the circulation of B. canis in Italy. 相似文献
116.
Kap‐Hoon Han Yoon‐Hee Chun Bárbara De Castro Pimentel Figueiredo Frederico Marianetti Soriani Marcela Savoldi Agostinho Almeida Fernando Rodrigues Charlie Timothy Cairns Elaine Bignell Jaqueline Moisés Tobal Maria Helena S. Goldman Jong‐Hwan Kim Yong‐Sun Bahn Gustavo Henrique Goldman Márcia Eliana Da Silva Ferreira 《Molecular microbiology》2010,75(6):1372-1388
Carbon dioxide (CO2) and its hydration product bicarbonate (HCO3‐) are essential molecules in various physiological processes of all living organisms. The reversible interconversion between CO2 and HCO3‐ is in equilibrium. This reaction is slow without catalyst, but can be rapidly facilitated by Zn2+‐metalloenzymes named carbonic anhydrases (CAs). To gain an insight into the function of multiple clades of fungal CA, we chose to investigate the filamentous fungi Aspergillus fumigatus and A. nidulans. We identified four and two CAs in A. fumigatus and A. nidulans, respectively, named cafA‐D and canA‐B. The cafA and cafB genes are constitutively, strongly expressed whereas cafC and cafD genes are weakly expressed but CO2‐inducible. Heterologous expression of the A. fumigatus cafB, and A. nidulans canA and canB genes completely rescued the high CO2‐requiring phenotype of a Saccharomyces cerevisiaeΔnce103 mutant. Only the ΔcafAΔcafB and ΔcanB deletion mutants were unable to grow at 0.033% CO2, of which growth defects can be restored by high CO2. Defects in the CAs can affect Aspergilli conidiation. Furthermore, A. fumigatusΔcafA, ΔcafB, ΔcafC, ΔcafD and ΔcafAΔcafB mutant strains are fully virulent in a low‐dose murine infection. 相似文献
117.
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119.
Plant defense against insect herbivores is mediated in part by enzymes that impair digestive processes in the insect gut. Little is known about the evolutionary origins of these enzymes, their distribution in the plant kingdom, or the mechanisms by which they act in the protease-rich environment of the animal digestive tract. One example of such an enzyme is threonine (Thr) deaminase (TD), which in tomato (Solanum lycopersicum) serves a dual role in isoleucine (Ile) biosynthesis in planta and Thr degradation in the insect midgut. Here, we report that tomato uses different TD isozymes to perform these functions. Whereas the constitutively expressed TD1 has a housekeeping role in Ile biosynthesis, expression of TD2 in leaves is activated by the jasmonate signaling pathway in response to herbivore attack. Ingestion of tomato foliage by specialist (Manduca sexta) and generalist (Trichoplusia ni) insect herbivores triggered proteolytic removal of TD2's C-terminal regulatory domain, resulting in an enzyme that degrades Thr without being inhibited through feedback by Ile. This processed form (pTD2) of TD2 accumulated to high levels in the insect midgut and feces (frass). Purified pTD2 exhibited biochemical properties that are consistent with a postingestive role in defense. Shotgun proteomic analysis of frass from tomato-reared M. sexta identified pTD2 as one of the most abundant proteins in the excrement. Among the other tomato proteins identified were several jasmonate-inducible proteins that have a known or proposed role in anti-insect defense. Subtilisin-like proteases and other pathogenesis-related proteins, as well as proteins of unknown function, were also cataloged. We conclude that proteomic analysis of frass from insect herbivores provides a robust experimental approach to identify hyperstable plant proteins that serve important roles in defense. 相似文献
120.
Marcelo R. de Carvalho Flávio A. Bockmann Dalton S. Amorim Carlos Roberto F. Brandão Mário de Vivo José L. de Figueiredo Heraldo A. Britski Mário C. C. de Pinna Naércio A. Menezes Fernando P. L. Marques Nelson Papavero Eliana M. Cancello Jorge V. Crisci John D. McEachran Robert C. Schelly John G. Lundberg Anthony C. Gill Ralf Britz Quentin D. Wheeler Melanie L. J. Stiassny Lynne R. Parenti Larry M. Page Ward C. Wheeler Julián Faivovich Richard P. Vari Lance Grande Chris J. Humphries Rob DeSalle Malte C. Ebach Gareth J. Nelson 《Evolutionary biology》2007,34(3-4):140-143