Biodiscovery of new Australian thraustochytrids for production of biodiesel and long-chain omega-3 oils

Heterotrophic growth of thraustochytrids has potential in co-producing a feedstock for biodiesel and long-chain (LC, ≥C₂₀) omega-3 oils. Biodiscovery of thraustochytrids from Tasmania (temperate) and Queensland (tropical), Australia, covered a biogeographic range of habitats including fresh, brackish, and marine waters. A total of 36 thraustochytrid strains were isolated and separated into eight chemotaxonomic groups (A–H) based on fatty acid (FA) and sterol composition which clustered closely with four different genera obtained by 18S rDNA molecular identification. Differences in the relative proportions (%FA) of long-chain C₂₀, C₂₂, omega-3, and omega-6 polyunsaturated fatty acids (PUFA), including docosahexaenoic acid (DHA), docosapentaenoic acid, arachidonic acid, eicosapentaenoic acid (EPA), and saturated FA, as well as the presence of odd-chain PUFA (OC-PUFA) were the major factors influencing the separation of these groups. OC-PUFA were detected in temperate strains of groups A, B, and C (Schizochytrium and Thraustochytrium). Group D (Ulkenia) had high omega-3 LC-PUFA (53% total fatty acids (TFA)) and EPA up to 11.2% TFA. Strains from groups E and F (Aurantiochytrium) contained DHA levels of 50–61% TFA after 7 days of growth in basal medium at 20 °C. Groups G and H (Aurantiochytrium) strains had high levels of 15:0 (20–30% TFA) and the sum of saturated FA was in the range of 32–51%. β,β-Carotene, canthaxanthin, and astaxanthin were identified in selected strains. Phylogenetic and chemotaxonomic groupings demonstrated similar patterns for the majority of strains. Our results demonstrate the potential of these new Australian thraustochytrids for the production of biodiesel in addition to omega-3 LC-PUFA-rich oils.     

An overview of models of stomatal conductance at the leaf level

Stomata play a key role in plant adaptation to changing environmental conditions as they control both water losses and CO₂ uptake. Particularly, in the context of global change, simulations of the consequences of drought on crop plants are needed to design more efficient and water‐saving cropping systems. However, most of the models of stomatal conductance (g_s) developed at the leaf level link g_s to environmental factors or net photosynthesis (A_net), but do not include satisfactorily the effects of drought, impairing our capacity to simulate plant functioning in conditions of limited water supply. The objective of this review was to draw an up‐to‐date picture of the g_s models, from the empirical to the process‐based ones, along with their mechanistic or deterministic bases. It focuses on models capable to account for multiple environmental influences with emphasis on drought conditions. We examine how models that have been proposed for well‐watered conditions can be combined with those specifically designed to deal with drought conditions. Ideas for future improvements of g_s models are discussed: the issue of co‐regulation of g_s and A_net; the roles of CO₂, absissic acid and H₂O₂; and finally, how to better address the new challenges arising from the issue of global change.     

Evolution of xyloglucan-related genes in green plants

Background  

The cell shape and morphology of plant tissues are intimately related to structural modifications in the primary cell wall that are associated with key processes in the regulation of cell growth and differentiation. The primary cell wall is composed mainly of cellulose immersed in a matrix of hemicellulose, pectin, lignin and some structural proteins. Xyloglucan is a hemicellulose polysaccharide present in the cell walls of all land plants (Embryophyta) and is the main hemicellulose in non-graminaceous angiosperms.     

Osteoprotegerin differentially regulates protease expression in osteoclast cultures

Cysteine proteases and matrix metalloproteinases (MMPs) are important factors in the degradation of organic matrix components of bone. Osteoprotegerin (OPG) is an osteoblast-secreted decoy receptor that inhibits osteoclast differentiation and activation. This study investigated the direct effects of human OPG on cathepsin K, MMP-9, MMP-2, and tissue inhibitors of metalloproteinases (TIMP1 and TIMP2) expressed by purified rabbit osteoclasts. The expression of two osteoclast markers, namely tartrate-resistant acid phosphatase (TRAP) and cathepsin K, was inhibited by 100 ng/mL hOPG, whereas MMP-9 expression was enhanced. Gelatinase activities were measured using a zymographic assay, and hOPG was shown to enhance both pro-MMP-9 and MMP-2 activities. Concomitantly, TIMP1 expression was greatly stimulated by hOPG, whereas TIMP2 mRNA levels were not modulated. Overall, these results show that hOPG regulates the proteases produced by purified osteoclasts differentially, producing a marked inhibitory effect on the expression of cathepsin K, the main enzyme involved in bone resorption.     

THE UPTAKE OF IODATE BY MARINE PHYTOPLANKTON1

Several studies have suggested that phytoplankton play a role in the iodine cycle. Using a short-term incubation technique for determining the uptake of iodate by phytoplankton, cultures of Thalassiosira oceanica Hasle, Skeletonema costatum (Greville) Cleve, Emiliania huxleyi (Lohmann) Hay and Mohler, and Dunaliella tertiolecta Butcher were found to be capable of assimilating iodate at rates ranging from 0.003 to 0.24 nmol IO₃^?·μg chlorophyll a^?1·h^?1. The kinetics for the uptake of iodate can be modeled, and the similarity between the model and experimental results suggests that there is a steady state between iodate uptake and release of dissolved iodine from the cells, presumably in the form of iodide. Two experiments were conducted in the Sand Shoal Inlet of the Cobb Bay estuary (37°15′N, 75°50′W). The uptake of iodate was 0.26 and 0.08 nmol IO₃^?·μg chlorophyll a^?1·h^?1 during high and low tide, respectively. Using field estimates based on measured levels of iodate in the estuary, we estimate that phytoplankton can take up as much as 3% of the ambient pool of iodate on a daily basis and the entire pool in about 1 month. Thus, phytoplankton can be a significant component of the global iodine cycle by mediating changes in the speciation of iodine in the marine environment.     

All MoMs are not equal: some statistical properties associated with reporting results in the form of multiples of the median.

The statistical procedure for discriminating between a Down syndrome or neural tube defect (NTD) fetus and a normal fetus relies, to a great extent, on the reporting of maternal serum alpha-fetoprotein (MSAFP), hCG, and uE3 results in the form of multiples of the median (MoMs). Further, threshold MoMs values for MSAFP, such as 2.5 MoMs, are often used to define a reference range to identify an NTD fetus. We show that a constant threshold-MoMs cutoff for MSAFP values actually refers to different percentiles of MSAFP levels at different gestational ages and that the combining of MoMs values between centers and gestational ages, such as suggested by Wald et al. for deriving a patient-specific risk index, is highly questionable. The results presented in this paper are quite general and will apply to all situations where MoMs are used.     

长江中下游湿地大型水鸟种群动态和幼鸟比例研究

迁徙水鸟保护对生物多样性保护具有重要意义。开展水鸟种群数量和幼鸟比例监测,对科学评估其种群变化趋势、制定长期保护策略具有重要价值。长江中下游湿地是东亚-澳大利西亚迁徙路线上重要的水鸟越冬区之一。本研究采用野外同步调查等方法对该区域87个湿地的亟需保护和具有代表性的10种大型越冬水鸟,其中雁形目6种,分别是鸿雁Anser cygnoides、豆雁A.fabalis、灰雁A.grus、白额雁A.albifrons、小白额雁A.erythropus和小天鹅Cygnus columbianus;鹤形目4种,分别是白鹤Leucogeranus leucogeranus、白枕鹤Antigone vipio、灰鹤Grus grus和白头鹤G.monacha,进行了长期监测(2003—2019年冬季),并结合相关文献,评估其种群变化趋势、幼鸟比例和死亡率。研究结果如下：(1)2005—2019年3种水鸟(豆雁、灰雁和灰鹤)的种群数量呈上升趋势,7种水鸟(鸿雁、白额雁、小白额雁、小天鹅、白鹤、白枕鹤和白头鹤)种群数量呈下降趋势;(2)种群趋势下降组(N=7)和上升组(N=3)的幼鸟比例均值在2016—2...     

Microtubule pattern and the occurrence of pre-prophase bands in embryogenic cultures of black spruce (Pieca mariana Mill.) and non-embryogenic cultures of jack pine (Pinus banksiana Lamb.)

Summary The organization of microtubules during interphase and prophase in embryogenic cultures of black spruce (Picea mariana) was investigated by indirect immunofluorescence. Somatic embryos of black spruce possessed an extensively branched and interconnecting network of fine interphase cortical microtubules. The development of pre-prophase bands (PPBs) in embryogenic black spruce cultures was compared with that in non-embryogenic cell cultures of jack pine (Pinus banksiana). PPBs in both species were initially arranged as a very broad array of microtubules, later (early to mid-prophase) becoming narrower and more intensely fluorescent. The occurrence of pre-prophase bands in relation to the number of phragmoplasts (i.e. PPB index) of black spruce somatic embryos was significantly higher (p<0.01) than that found for jack pine cells.