Does hybridization between divergent progenitors drive whole‐genome duplication?

Hybridization and whole-genome duplication are both potential mechanisms of rapid speciation which sometimes act in concert. Recent surveys, showing that homoploid hybrid species tend to be derived from parents that are less evolutionarily divergent than parents of polyploid hybrid species (allopolyploids), have been interpreted as supporting a hypothesis that high divergence between hybridizing species drives whole-genome duplication. Here, we argue that such conclusions stem from problems in sampling (especially the omission of autopolyploids) and null model selection, and underestimate the importance of selection. The data simply demonstrate that hybridization between divergent parents has a higher probability of successfully producing a species if followed by polyploidization.     

NARRATIVES OF ‘TERMINAL SEDATION’, AND THE IMPORTANCE OF THE INTENTION‐FORESIGHT DISTINCTION IN PALLIATIVE CARE PRACTICE

The moral importance of the ‘intention–foresight’ distinction has long been a matter of philosophical controversy, particularly in the context of end‐of‐life care. Previous empirical research in Australia has suggested that general physicians and surgeons may use analgesic or sedative infusions with ambiguous intentions, their actions sometimes approximating ‘slow euthanasia’. In this paper, we report findings from a qualitative study of 18 Australian palliative care medical specialists, using in‐depth interviews to address the use of sedation at the end of life. The majority of subjects were agnostic or atheistic. In contrast to their colleagues in acute medical practice, these Australian palliative care specialists were almost unanimously committed to distinguishing their actions from euthanasia. This commitment appeared to arise principally from the need to maintain a clear professional role, and not obviously from an ideological opposition to euthanasia. While some respondents acknowledged that there are difficult cases that require considered reflection upon one's intention, and where there may be some ‘mental gymnastics,’ the nearly unanimous view was that it is important, even in these difficult cases, to cultivate an intention that focuses exclusively on the relief of symptoms. We present four narratives of ‘terminal’ sedation – cases where sedation was administered in significant doses just before death, and may well have hastened death. Considerable ambiguities of intention were evident in some instances, but the discussion around these clearly exceptional cases illustrates the importance of intention to palliative care specialists in maintaining their professional roles.     

Development and Experimental Validationof a Flmd/Structure-Interaction Finite Element Modelof a Vacuum-Driven Cell Culture Mechanostimulus System

A new fluid/structure-interaction finite element formulation is reported, by means of which reactive fluid stresses can be determined for what is currently the most widely used laboratory apparatus (; the Flexercell Strain Unit ) for delivering controlled in vitro mechanical stimuli to cultured cells. The apparatus functions by means of cyclic vacuum application to the undersurface of a membrane-like circular rubber substrate. When operated in Us original embodiment ( i.e., without axial constraint to substrate motion), the pulsatile vacuum causes appreciable pulsatile excursions ( often several millimeters) of the substrate. The mechanical stimuli experienced by cells attached atop the substrate include not only substrate distention, but also potentially confounding reactive fluid stresses due to coupled motions of the overlying liquid culture nutrient medium. Since it is impractical to directly measure reactive fluid stress in such environments, a corresponding mathematical model has been developed. The formulation involves transient continuum finite element solutions for the nutrient medium flow field and for the deformation of the substrate, coupled at their mutual interface ( the substrate culture surface) Besides the nonlinearities inherent in the flow field and substrate treatments per se, the numerical problem is complicated by the presence of moving boundaries at the nutrient free surface and at the nutrient/substrate interface, as well as by the need to enforce fluid/structure interaction throughout the duty cycle. Algorithmic considerations appropriate to achieving physically realistic numerical performance are reported, and a confirmatory laboratory validation experiment is described.     

Topographic and ungulate regulation of soil C turnover in a temperate grassland ecosystem

A major obstacle for predicting the effects of climate and land use changes on global soil carbon (C) stores is the very limited knowledge about the long timescale dynamics of the relatively stable fraction of soil C, which represents the bulk of soil C and the primary determinant of the long‐term C balance of terrestrial ecosystems. In this study, we examined how variable topo‐edaphic conditions and herds of native migratory ungulates influenced turnover of the stable pool (total minus active fraction) of soil C in grasslands of Yellowstone National Park (YNP). Soil C properties were determined for grasslands located inside and outside long‐term ungulate exclosures established 1958–1962 at seven variable topographic positions. Active C pool sizes, estimated with soil laboratory incubations, and soil radiocarbon measures were used to parameterize a process‐based model to determine turnover of the stable C pool at the sites. Stable C turnover ranged 37–653 and 89–869 years for 0–10 and 0–20 cm soils, respectively. Among ungrazed communities, there was a trend for stable soil C turnover to slow along topographic gradients of increasing soil moisture, soil C content, and shoot biomass from hilltop to slope‐bottom positions. This was likely a result of an increasing amount of support tissue resulting in greater concentrations of lignin and cellulose as shoot biomass increased down slope. In contrast, across the grazed landscape, stable C turnover sped up from hilltop to slope‐bottom positions, which was likely a consequence of grazer effects on plant species composition along the topographic gradient. These findings indicated that despite topography playing the primary role in controlling such important site characteristics as soil moisture, soil C content, and plant production in YNP grassland, the long‐term turnover of the stable C pool was determined by herbivores. The results demonstrate the important regulatory role of herbivores in controlling the C balance of this semiarid grassland ecosystem.     

Treefall gaps required for establishment,but not survival,of invasive Rubus phoenicolasius in deciduous forest,Maryland, USA

Although plant invasions are often associated with disturbance, localized disturbances can promote invasion either by: (i) creating sites where individuals establish; or (ii) enabling an invader to colonize the entire stand. The former is expected when both establishment and survival to reproductive age require disturbed conditions, whereas the latter should occur in systems when either establishment or survival are limited to disturbed sites. We investigated the role of localized disturbance, specifically treefalls, in the invasion of the Asian Rubus phoenicolasius in a deciduous forest in Maryland, USA. We investigated the density and demography of R. phoenicolasius in treefall gaps of various sizes, but identical age to non‐gap areas, using Classification and Regression Tree (CART) analyses to identify the most important predictors. To explore how the demography of established individuals responds to disturbed versus undisturbed conditions, we carried out a garden experiment with three different levels of shade (5, 12 and 22% full sun). We found vegetative and sexual reproduction, and seedling establishment, to be limited to large gaps in an old stand, but not in a stand in an earlier age of succession. However, in the garden experiment, established plants were able to survive and grow under all shade treatments. These findings indicate that R. phoenicolasius requires disturbances such as treefalls to establish in forests, but established plants will survive canopy closure, leading to stand‐wide invasion. Managers should be able to prevent invasion, however, by inspecting large gaps for new recruits every 3 years.     

The taxonomy, ecology and conservation status of the Golden-rayed Blue: a threatened butterfly endemic to western Victoria, Australia

The Golden‐rayed Blue, Candalides noelkeri sp. nov. (Lepidoptera: Lycaenidae), from the Wimmera of western Victoria, Australia, is described and illustrated. The male and female genitalia and immature stages are figured, described and compared with those of Candalides heathi and C. xanthospilos. Candalides noelkeri sp. nov. is placed in the C. xanthospilos species‐group, being most closely allied to and allopatric with C. heathi. It is predominantly univoltine, with adults usually present from late November to early February. However, it has a facultative pupal diapause that gives rise to a partial overlapping second generation in mid‐summer. The species is ecologically specialized, monophagous and has a narrow geographical range, currently known only from two localities in a restricted area near Natimuk. Within this limited area it is restricted to flood plains bordering natural salt‐lakes where the larval food plant, a prostrate form of Myoporum parvifolium (Myoporaceae), grows as a low spreading ground cover plant. Morphological and geological evidence suggest a recent (late Pleistocene) allopatric speciation event between C. noelkeri sp. nov. and C. heathi. The small, peripheral spatial distribution of C. noelkeri sp. nov. implies that differentiation has been achieved by the founder effect, either through peripheral isolates speciation (peripatric speciation) or postspeciation dispersal, possibly as a result of a barrier created by the volcanic plains in western Victoria. Available information indicates that C. noelkeri sp. nov., Victoria's only endemic species of butterfly, is facing a high risk of extinction and accordingly its conservation status should be considered as Endangered. The most serious threat at the type locality is habitat change or succession caused by invasion of Melaleuca halmaturorum, which is creating a dense shaded paperbark forest that is reducing both the preferred open sunny microhabitat and the extent of the larval food plant. Recognition of C. noelkeri sp. nov. as a flagship taxon is likely to enhance the conservation of biodiversity in remnant flood plain/salt‐lake ecosystems of temperate south‐eastern Australia. © 2004 The Linnean Society of London, Biological Journal of the Linnean Society, 2004, 81 , 275–299.     

AUTECOLOGY AND THE FILLING OF ECOSPACE: KEY METAZOAN RADIATIONS

Abstract:  All possible combinations of six tiering positions in relation to the substratum/water interface, six motility levels and six feeding strategies define a complete theoretical ecospace of 216 potential modes of life for marine animals. The number of modes of life actually utilized specifies realized ecospace. Owing to constraints of effectiveness and efficiency the modern marine fauna utilizes only about half the potential number of modes of life, two-thirds of which (62 of 92) are utilized by animals with readily preserved, mineralized hard parts. Realized ecospace has increased markedly since the early evolution of animal ecosystems. The Ediacaran fauna utilized at most 12 modes of life, with just two practised by skeletal organisms. A total of 30 modes of life are recorded in the Early and Middle Cambrian, 19 of which were utilized by skeletal organisms. The other 11 are documented from soft-bodied animals preserved in the Chengjiang and Burgess Shale Konservat-Lagerstätten. The number of modes of life utilized by skeletal organisms increased by more than 50 per cent during the Ordovician radiation to a Late Ordovician total of 30. Between the Late Ordovician and the Recent the number of utilized modes of life has doubled again. The autecological and taxonomic diversity histories of the marine metazoa appear to be broadly parallel, and future studies of theoretical ecospace utilization should provide more detailed tests of pattern and process in the ecological history of the metazoa.     

Parental role division predicts avian preen wax cycles

Previous studies have shown that preen wax composition in some sandpipers shifts from the usual monoesters to diesters during the breeding season, possibly to reduce the ability of mammalian predators to find nests using olfactory cues. To investigate further the relationship between incubation and wax secretion, we examined seven sandpiper species with different incubation patterns (species in which both sexes incubate, in which only males incubate and in which only females incubate). During the breeding period, diester preen wax was secreted almost exclusively by the incubating sex in species with uniparental incubation, and by both sexes in species with biparental incubation. These findings suggest that diester preen waxes have a function that is directly related to incubation. Unexpectedly, in female-incubating Curlew Sandpiper Calidris ferruginea and Buff-breasted Sandpiper Tryngites subruficollis , some males also secreted diester preen waxes during the breeding period. This suggests that some males may in fact incubate, that these waxes may be a remnant from their evolutionary past when both sexes incubated, or that males need to be olfactorally cryptic because they are involved in the making of nest scrapes. The seasonal pattern of preen wax composition was also studied in captive male, female and female-mimicking male ('faeder') Ruff Philomachus pugnax . Captive female Ruff changed preen wax composition from monoesters to diesters in the spring despite the fact that no incubation took place. This suggests that circannual rhythms rather than actual incubation behaviour may trigger the shift to diester waxes. All captive male Ruff, including the faeders, continued to secrete monoesters, supporting the hypothesis that only the incubating sex secretes diesters.     

Forest landscape pattern in the KwaZulu–Natal midlands,South Africa: 50 years of change or stasis?

Abstract Understanding patterns and processes of habitat change is essential for managing and conserving forest fragments in anthropogenically altered landscapes. Digitized aerial photographs from 1944 and 1996 were examined for changes to the indigenous forest landscape in the Karkloof‐Balgowan archipelago in KwaZulu–Natal, South Africa. Attributes relating to proximate land‐use, patch shape, isolation and position in the landscape were used to determine putative causes of forest change. The total change in forest area was ?5.7% (forest covered 6739 ha in 1996). This is contrasted with previous reports for the period 1880–1940 that estimated change in total forest area of up to ?80%. Attrition was the predominant process of forest transformation between 1944 and 1996. Despite little overall change in forest area, 786 mostly small (<0.5 ha) forest patches were lost from the landscape, leaving 1277 forest patches in 1996. An increase in patch isolation, but no change in patch cohesion accompanied the changes in forest area. Ignoring patches that were eliminated, 514 patches decreased in area. This was partly a function of patch size, but the conversion of natural grassland to commercial plantation forestry in the matrix also influenced forest decline. Their small size and irregular shape caused forest patches in the region to be vulnerable to edge effects. Core area declined in a negative exponential way with increasing edge width and the total area of edge habitat exceeded that of core habitat at an edge width of only 50 m. Nevertheless, total core area decreased by only 2% (65 ha) between 1944 and 1996 because most of the eliminated patches were small and contained no core area. The large Karkloof forest (1649 ha) is a conservation priority for forest interior species, but the ecological role and biodiversity value of small forest patches should not be overlooked.