Evaluating the impacts of climate and elevated carbon dioxide on tropical rainforests of the western Amazon basin using ecosystem models and satellite data

Forest inventories from the intact rainforests of the Amazon indicate increasing rates of carbon gain over the past three decades. However, such estimates have been questioned because of the poor spatial representation of the sampling plots and the incomplete understanding of purported mechanisms behind the increases in biomass. Ecosystem models, when used in conjunction with satellite data, are useful in examining the carbon budgets in regions where the observations of carbon flows are sparse. The purpose of this study is to explain observed trends in normalized difference vegetation index (NDVI) using climate observations and ecosystem models of varying complexity in the western Amazon basin for the period of 1984–2002. We first investigated trends in NDVI and found a positive trend during the study period, but the positive trend in NDVI was observed only in the months from August to December. Then, trends in various climate parameters were calculated, and of the climate variables considered, only shortwave radiation was found to have a corresponding significant positive trend. To compare the impact of each climate component, as well as increasing carbon dioxide (CO₂) concentrations, on evergreen forests in the Amazon, we ran three ecosystem models (CASA, Biome‐BGC, and LPJ), and calculated monthly net primary production by changing a climate component selected from the available climate datasets. As expected, CO₂ fertilization effects showed positive trends throughout the year and cannot explain the positive trend in NDVI, which was observed only for the months of August to December. Through these simulations, we demonstrated that the positive trend in shortwave radiation can explain the positive trend in NDVI observed for the period from August to December. We conclude that the positive trend in shortwave radiation is the most likely driver of the increasing trend in NDVI and the corresponding observed increases in forest biomass.     

Effect of increased atmospheric CO2 on the performance of an aquatic detritivore through changes in water temperature and litter quality

Cold water woodland streams, where terrestrially derived organic matter fuels aquatic food webs, can be affected by increases in atmospheric CO₂ concentrations, as these are predicted to lead to increases in water temperature and decreases in organic matter quality. In fact, elevated CO₂ (580 ppm) decreased the initial phosphorus concentration of birch litter by 30% compared with litter grown under ambient conditions (380 ppm). Here, we first assessed the effect of differences in litter quality on mass loss, microbial colonization and conditioned litter quality after submersion in a mountain stream for 2 weeks. Leaching did not change the relative differences between litter types, while fungal biomass was two fold higher in elevated litter. We then offered this litter (conditioned ambient and elevated) to a stream detritivore that was kept at 10 and 15 °C to assess the individual and interactive effects of increased temperature and decreased litter quality on invertebrate performance. When given a choice, the detritivore preferred elevated litter, but only at 10 °C. When fed litter types singularly, there was no effect of litter quality on consumption rates; however, the effect of temperature depended on individual size and time of collection. Growth rates were higher in individuals fed ambient litter at 10 °C when compared with individuals fed elevated litter at 15 °C. Mortality did not differ between litter types, but was higher at 15 °C than at 10 °C. Increases in temperature led to alterations in the individual body elemental composition and interacted with litter type. The performance of the detritivore was therefore more affected by increases in temperature than by small decreases in litter quality. However, it seems conceivable that in a future global warming scenario the simultaneous increases in water temperature and decreases in litter quality might affect detritivores performance more than predicted from the effects of both factors considered individually.     

Riparian land use and the relationship between the benthos and litter decomposition in tropical montane streams

1. Although stream–catchment interactions have been analysed in some detail in temperate environments, little is known about the effects of land‐use changes in the tropics. Here, we analyse differences in benthic communities (macroinvertebrates and fungi) under two contrasting land uses (mature secondary forest and pasture) in montane streams in north‐western Ecuador and their influence on the rates of litter processing. 2. Between 2005 and 2006, we used a combination of coarse and fine mesh bags to study the relative contribution of macroinvertebrates and fungi to processing of two types of litter, Alnus acuminata and Inga spectabilis, in three‐first‐order streams running through mature secondary montane forests and adjacent downstream reaches running through pastures. At the same time, we characterised the assemblages of shreddering macroinvertebrates and fungi communities and the litter processing rates in stream reaches under both vegetation types. 3. Litter processing rates attributable to invertebrate feeding (coarse mesh bags) were significantly slower in streams running through pastures. Nevertheless, shredder diversity and richness were similar between pasture and forest sections, while shredder abundance was significantly higher in forest streams (mainly Phylloicus sp. :Trichoptera). Fungal reproductive activity and litter processing rates were low (fine mesh bags) and did not differ significantly between pasture and forest stream reaches. 4. Phylloicus sp. abundance was the best predictor of the percentage of litter remaining in coarse mesh bags across pasture and forest sites. Neither shredder diversity nor their species richness was a significant predictor of mass loss, as most of the decomposition was performed by a single keystone species. Although litter decomposition by microbial decomposers was low, fungal biomass (but not diversity) was the best variable explaining the percentage of litter remaining in fine mesh bags. 5. Our data suggest that, in these Neotropical montane streams, land use can have a significant impact on the rates of critical ecosystem processes, such as litter decomposition. In this study, this effect was not mediated by a major shift in the structure of the benthos, but by a decrease in the abundance and relative representation of a single species whose life history makes it critical to litter processing. 6. This study highlights the significant role that macroinvertebrate fauna can have in the processing of litter in Neotropical streams and the predominant role that single species can have in terms of controlling stream ecosystem‐level processes. Understanding the extent to which these patterns affect the long‐term and large‐scale functioning of stream ecosystems still needs further research and will become increasingly important in terms of managing lotic ecosystems in the context of rapid land‐use change.     

Sex‐biased dispersal and high levels of gene flow among local populations in the argentine boa constrictor,Boa constrictor occidentalis

Abstract The knowledge of dispersal is essential to understand the ecology of any species, since population dynamics, spatial distribution and genetic structure are closely tied to patterns of movement. In this paper we estimate dispersal patterns in natural populations of the endangered snake Boa constrictor occidentalis (Serpentes, Boidae), using allozymes as genetic markers. Blood samples were obtained from a total of 120 adult individuals of nine localities from two areas, Sobremonte and Pocho, in Argentina. Only four out of a total of 24 loci were polymorphic: 6‐Pgdh‐1, Cat‐1, Ldh and Hp. The values of expected and observed mean heterozygosities, the percentage of polymorphic loci and mean number of alleles per locus for each population confirm the low levels of genetic variability in this snake. F_ST and N_em mean values were 0.0089 and 46.1 for Sobremonte and 0.0379 and 7.46 for Pocho, indicating important levels of gene flow. A comparison of F_ST between genders in both areas suggests a male‐biased dispersal, which could be explained by the characteristics of the mating system: males carry out an active mate search of receptive females, and philopatry could be selected in females due to the benefits of the familiarity with the natal area in the use of local resources.     

Observation of some key stages of the embryonic development of Biomphalaria straminea (Dunker, 1848) (Molluska,Planorbidae)

Summary

Biomphalaria straminea is a freshwater snail and one of the intermediate hosts of the trematode parasite which causes schistosomiasis in Brazil. The main stages of embryonic development were analyzed with confocal laser scanning microscopy (CLSM), using the fluorescent probe DiOC and Nile Red as a vital stain in in vivo preparations. In fixed preparations nuclei were stained by the Feulgen reaction or the fluorescent DNA probe, Höechst 33342. Results obtained from the analysis of embryos at the stages of early cleavage, morula, blastula, gastrula, early trocophore and veliger showed that these stages are similar to those described for Biomphalaria glabrata and Biomphalaria tenagophila. CLSM optical sections of early trochophore showed important morphological structures such as the blastopore, stomodeum and shell gland; and in early veliger, internal organs such as the esophagus, stomach and male and female ducts were also clearly identified.     

Flow and Oxygen Transfer Characteristics of an Intravenous Membrane Oxygenator: A Computational Study

Abstract

Spectral element computational simulations of the conservation of mass, momentum and species equations are performed to investigate the flow and oxygen transfer characteristics of an Intravenous Membrane Oxygenator (IMO). The simulations consider a three-dimensional IMO computational model consisting of equally-spaced fibers, an elastic balloon with non-permeable walls positioned longitudinally within the vena cava, and a Newtonian and time-dependent incompressible flow. Flow characteristics and oxygen transfer parameters are determined for operating conditions of a stationary and a pulsating balloon. For the stationary balloon configuration the flow is two-dimensional, parallel, laminar and without secondary flows for the Reynolds number range of 5.7-455.2. Evaluations of the oxygen transfer characteristics for the stationary balloon indicate that the main transport mechanisms are diffusion and convection in the crosswise and streamwise directions, respectively. Additionally, evaluations of oxygen transfer rates and Sherwood numbers in this Reynolds number range indicate that the oxygen transfer rate reaches an asymptotic limit at relatively moderate Reynolds numbers. For the pulsating balloon, flow characteristic results demonstrate the existence of a strong secondary flow around the fiber, and between the balloon and the fiber. This secondary flow induces oscillatory crosswise and streamwise velocities and a seemingly random spanwise flow which enhances the flow mixing as well as the transport of oxygen from the fiber surface to the bulk flow.     

Changes in phytoplankton,benthic invertebrate and fish assemblages of boreal lakes following invasion by Gonyostomum semen

1. During recent decades, Gonyostomum semen populations have spread in northern temperate regions forming dense blooms that may dominate the phytoplankton assemblage for extended periods. In this study, we investigate the effects of G. semen blooms in boreal brown water lakes with special emphasis on phytoplankton, fish and benthic invertebrate assemblages using data from 10 boreal lakes sampled annually over a 10‐year period. 2. Significant differences in phytoplankton and benthic invertebrate assemblages were found between lakes with high (3.01 mm³ L^?1; >80% phytoplankton biomass) and lakes with low G. semen biomass (0.03 mm³ L^?1; <5% phytoplankton biomass). In particular, high G. semen lakes had lower biomass of smaller, edible phytoplankton and a higher abundance and biomass of benthic invertebrates, especially Chaoborus flavicans, and perch than low G. semen lakes. 3. The length distribution of fish also suggested a tendency towards large and older fish and a lower recruitment success in high G. semen lakes, as denoted by lower abundances of fish shorter than 10 cm and higher biomass and abundance of fish longer than 15 cm in high G. semen lakes. 4. This study shows that high G. semen lakes are characterised by less edible phytoplankton, dominance by a few species and enhanced benthic secondary and fish production. Hence, the conjecture that high biomasses of G. semen create a bottleneck in the energy transfer to higher trophic levels seems less likely in boreal lakes.     

Isolation and characterization of microsatellite markers in Calomys musculinus (Muridae,Sigmodontinae, Phyllotini), the natural reservoir of Junin virus

Calomys musculinus, one of the most abundant rodent species in central Argentina, is the reservoir of Junin virus, the aetiological agent of Argentine hemorrhagic fever. We isolated six polymorphic microsatellite loci for microgeographical studies of population structure in this species. Amplification of these loci in 36 individuals from three natural populations revealed five to 14 alleles per locus and expected heterozygosities from 0.426 to 0.868. Cross‐species amplifications suggest that primers designed for these loci may be useful in other closely related species of the tribe Phyllotini, but not in species of other more distantly related tribes of the subfamily Sigmodontinae.