Foliage randomness and light interception in 3-D digitized trees: an analysis from multiscale discretization of the canopy

Light models for vegetation canopies based on the turbid medium analogy are usually limited by the basic assumption of random foliage dispersion in the canopy space. The objective of this paper was to assess the effect of three possible sources of non-randomness in tree canopies on light interception properties. For this purpose, four three-dimensional (3-D) digitized trees and four theoretical canopies – one random and three built from fractal rules – were used to compute canopy structure parameters and light interception, namely the sky-vault averaged STAR (Silhouette to Total Area Ratio). STAR values were computed from (1) images of the 3-D plants, and (2) from a 3-D turbid medium model using space discretization at different scales. For all trees, departure from randomness was mainly due to the spatial variations in leaf area density within the canopy volume. Indeed STAR estimations, based on turbid medium assumption, using the finest space discretization were very close to STAR values computed from the plant images. At this finest scale, foliage dispersion was slightly clumped, except one theoretical fractal canopy, which showed a marked regular dispersion. Taking into account a non-infinitely small leaf size, whose effect is theoretically to shorten self-shading, had a minor effect on STAR computations. STAR values computed from the 3-D turbid medium were very sensitive to plant lacunarity, a parameter introduced in the context of fractal studies to characterize the distribution of gaps in porous media at different scales. This study shows that 3-D turbid medium models based on space discretization are able to give correct estimation of light interception by 3-D isolated trees, provided that the 3-D grid is properly defined, that is, discretization maximizes plant lacunarity.     

A diminution in ascorbate oxidase activity affects carbon allocation and improves yield in tomato under water deficit

The regulation of carbon allocation between photosynthetic source leaves and sink tissues in response to stress is an important factor controlling plant yield. Ascorbate oxidase is an apoplastic enzyme, which controls the redox state of the apoplastic ascorbate pool. RNA interference was used to decrease ascorbate oxidase activity in tomato (Solanum lycopersicum L.). Fruit yield was increased in these lines under three conditions where assimilate became limiting for wild‐type plants: when fruit trusses were left unpruned, when leaves were removed or when water supply was limited. Several alterations in the transgenic lines could contribute to the improved yield and favour transport of assimilate from leaves to fruits in the ascorbate oxidase lines. Ascorbate oxidase plants showed increases in stomatal conductance and leaf and fruit sugar content, as well as an altered apoplastic hexose : sucrose ratio. Modifications in gene expression, enzyme activity and the fruit metabolome were coherent with the notion of the ascorbate oxidase RNAi lines showing altered sink strength. Ascorbate oxidase may therefore be a target for strategies aimed at improving water productivity in crop species.     

Climate change and plant distribution: local models predict high-elevation persistence

Mountain ecosystems will likely be affected by global warming during the 21st century, with substantial biodiversity loss predicted by species distribution models (SDMs). Depending on the geographic extent, elevation range, and spatial resolution of data used in making these models, different rates of habitat loss have been predicted, with associated risk of species extinction. Few coordinated across-scale comparisons have been made using data of different resolutions and geographic extents. Here, we assess whether climate change-induced habitat losses predicted at the European scale (10 × 10' grid cells) are also predicted from local-scale data and modeling (25 m × 25 m grid cells) in two regions of the Swiss Alps. We show that local-scale models predict persistence of suitable habitats in up to 100% of species that were predicted by a European-scale model to lose all their suitable habitats in the area. Proportion of habitat loss depends on climate change scenario and study area. We find good agreement between the mismatch in predictions between scales and the fine-grain elevation range within 10 × 10' cells. The greatest prediction discrepancy for alpine species occurs in the area with the largest nival zone. Our results suggest elevation range as the main driver for the observed prediction discrepancies. Local-scale projections may better reflect the possibility for species to track their climatic requirement toward higher elevations.     

Interactions between fauna and sediment control the breakdown of plant matter in river sediments

1. A substantial portion of particulate organic matter (POM) is stored in the sediment of rivers and streams. Leaf litter breakdown as an ecosystem process mediated by microorganisms and invertebrates is well documented in surface waters. In contrast, this process and especially the implication for invertebrates in subsurface environments remain poorly studied. 2. In the hyporheic zone, sediment grain size distribution exerts a strong influence on hydrodynamics and habitability for invertebrates. We expected that the influence of shredders on organic matter breakdown in river sediments would be influenced strongly by the physical structure of the interstitial habitat. 3. To test this hypothesis, the influence of gammarids (shredders commonly encountered in the hyporheos) on degradation of buried leaf litter was measured in experimental systems (slow filtration columns). We manipulated the structure of the sedimentary habitat by addition of sand to a gravel‐based sediment column to reproduce three conditions of accessible pore volume. Ten gammarids were introduced in columns together with litter bags containing alder leaves at a depth of 8 cm in sediment. Leaves were collected after 28 days to determine leaf mass loss and associated microbial activity (fungal biomass, bacterial abundance and glucosidase, xylosidase and aminopeptidase activities). 4. As predicted, the consumption of buried leaf litter by shredders was strongly influenced by the sediment structure. Effective porosity of 35% and 25% allowed the access to buried leaf litter for gammarids, whereas a lower porosity (12%) did not. As a consequence, leaf litter breakdown rates in columns with 35% and 25% effective porosity were twice as high as in the 12% condition. Microbial activity was poorly stimulated by gammarids, suggesting a low microbial contribution to leaf mass loss and a direct effect of gammarids through feeding activity. 5. Our results show that breakdown of POM in subsurface waters depends on the accessibility of food patches to shredders.     

EARLY–MIDDLE JURASSIC LYTOCERATID AMMONITES WITH CONSTRICTIONS FROM MOROCCO: PALAEOBIOGEOGRAPHICAL AND EVOLUTIONARY IMPLICATIONS

Abstract:  The ammonite genus Alocolytoceras Hyatt, 1900 is an uncommon lytoceratid with distinctive shell ornament. A set of 58 specimens, recently collected at Amellago in the central High Atlas (Morocco), has enabled us to trace a succession of three species over eight biozones from the Toarcian to the Aalenian. Two specimens from the Lusitanian Basin are added for comparison. Following a review of the genus, based on original specimens and data from the literature, seven species are considered valid. A palaeobiogeographical synthesis of 13 regions demonstrates irregular distribution patterns over time, with a constant presence in the south-west Tethys and an instance of rapid diversification of an endemic fauna in north-west Europe. Our data challenge the conventional view that lytoceratid ammonite evolution was 'conservative'.     

Male–female associations and female olfactory neurogenesis with pair bonding in Mus spicilegus

Mound‐building mice Mus spicilegus exhibit life‐history traits that are unique among the Mus species complex, such as the cooperative mound‐building behaviour that gives the species its common name. In this and other socially coordinated activities, such as those associated with reproduction, these mice should be able to recognize individuals (via discrimination based on kinship, population and species) to mediate their interactions. Our previous studies have provided evidence of population and species recognition in M. spicilegus. The aims of the present study were: (i) to study associations of mice during their reproductive period (in outdoor enclosures), (ii) to investigate whether there is an influence of relatedness of females in these associations, (iii) to determine whether female M. spicilegus are able to make kin vs. non‐kin discriminations, and (iv) to study certain neurobiological correlates of male–female bonds. Stable male–female associations were found in almost all the experimental groups, both those with unrelated and unfamiliar females and those with unfamiliar sisters. Kinship between females did not affect female associations in our enclosure experiment, but in our kin discrimination experiment females did distinguish between unfamiliar sisters and unfamiliar unrelated females. Shared kinship may not encourage cooperative rearing of pups but could enhance cooperation in building mounds where mice over‐winter. Male–female associations could be based on a social bond, as hypothesized from previous laboratory experiments. This was substantiated in this study by increased olfactory bulbar neurogenesis in females that preferred (in two choice tests) their sexual partner 3 weeks after their first mating. Based on these results there is clear evidence to suggest that the mating system of M. spicilegus is social monogamy. © 2005 The Linnean Society of London, Biological Journal of the Linnean Society, 2005, 84 , 323–334.     

Phenotypic plasticity in reproductive traits: importance in the life history of Helix aspersa (Mollusca: Helicidae) in a recently colonized habitat

Reproductive traits of the land snail Helix aspersa Mtiller were investigated under artificial conditions from two samples, one collected from a population exposed to unpredictable human pressures in its natural environment, i.e. a recently created polders area with intensive agriculture, and the other from a snail farm in which animals were reared under constant conditions denned as 'optimal' for growth and reproduction. Results were compared with data collected from natural populations of the same region (Brittany) and from habitats spanning the environmental heterogeneity of the range of the species. A large part of the variation among populations could be explained by different phenotypic covariances between shell size, clutch size and egg size, but not by the number of clutches per snail. Thus, the higher egg production of snails from the polders was related to (i) a strong correlation between clutch size and shell size, shell size being in the upper limit of the overall range for the region concerned; (ii) an uncommonly low egg weight in comparison with the 'norm' of Helix aspersa , this trait seeming to be involved in a trade-off with clutch size. Second clutches were smaller than the first ones, but their eggs were significantly heavier. This difference may be linked to a size-dependent mortality of juveniles during winter which arises in all populations in which hibernation occurs as an adaptation to low temperatures. In addition to the selective regime usually involved for populations of helicid snails from Western Europe, several unpredictable mortality factors occurred in the polders area: herbicide and pesticide treatments (lethal for young snails), human predation (lethal for adults) and burning (letiial for all snails). Life-history patterns of Helix aspersa are discussed in relation to its ability to successfully colonize a large range of habitats modified by humans, to such an extent that it can become a pest.     

Direct and Maternal Effects of Elevated CO2on Early Root Growth of GerminatingArabidopsis thalianaSeedlings

Individuals ofArabidopsis thaliana, collected in different naturalpopulations, were grown in controlled and elevated CO₂in a glasshouse.Following germination, root growth of progeny of different linesof these populations was studied in control and elevated atmosphericCO₂. No significant direct effect of atmospheric CO₂concentrationcould be demonstrated on root growth. An important parentaleffect was apparent, namely that root length and branching weredecreased in seeds collected from a mother plant which had beengrown in elevated CO₂. This was correlated with smaller seeds,containing less nitrogen. These parental effects were geneticallyvariable. We conclude that CO₂may affect plant fitness via parentaleffects on seed size and early root growth and that the geneticvariability shown in our study demonstrates thatArabidopsispopulationswill evolve in the face of this new selective pressure.Copyright1998 Annals of Botany Company Root growth, root branching, seed, elevated CO₂, natural population,Arabidopsis thaliana, parental effect.