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排序方式: 共有468条查询结果,搜索用时 31 毫秒
71.
Meghann Ryan Peter Kochunov Laura M. Rowland Braxton D. Mitchell S. Andrea Wijtenburg Els Fieremans Jelle Veraart Dmitry S. Novikov Xiaoming Du Bhim Adhikari Feven Fisseha Heather Bruce Joshua Chiappelli Hemalatha Sampath Seth Ament Jeffrey O'Connell Alan R. Shuldiner L. Elliot Hong 《Obesity (Silver Spring, Md.)》2017,25(11):1876-1880
72.
Biological control potential of nine entomopathogenic nematodes, Heterorhabditis bacteriophora CLO51 strain (HbCLO51), H. megidis VBM30 strain (HmVBM30), H. indica, Steinernema scarabaei, S. feltiae, S. arenarium, S. carpocapsae Belgian strain (ScBE), S. glaseri Belgian strain (SgBE) and S. glaseri NC strain (SgNC), was tested against second-, and third-instar larvae and pupae of Hoplia philanthus in laboratory and greenhouse experiments. The susceptibility of the developmental stages of H. philanthus differed greatly among tested nematode species/strains. In the laboratory experiments, SgBE, SgNC, HbCLO51 and HmVBM30 were highly virulent to third-instar larvae and pupae while SgBE was only virulent to second-instar larvae. Pupae were highly susceptible to HbCLO51, HmVBM30, SgBE and SgNC (57–100%) followed by H. indica and S. scarabaei (57–76%). In pot experiments, HbCLO51, SgBE and S. scarabaei were highly virulent to the third-instar larvae compared to the second-instar larvae. Our observations, combined with those of previous studies on other nematode and white grub species, show that nematode virulence against white grub developmental stages varies with white grub and nematode species. 相似文献
73.
Ying Xiong Chaitanya Raj Adhikari Hidetaka Kawakita Keisuke Ohto Katsutoshi Inoue Hiroyuki Harada 《Bioresource technology》2009,100(18):4083-4089
Persimmon waste was chemically modified with dimethylamine (DMA) to obtain a tertiary-amine-type gel, named DMA persimmon waste gel (DMA-PW). It was found to be effective for the adsorption of Au(III), Pd(II), and Pt(IV) in hydrochloric acid medium. In contrast, base metals such as Cu(II), Zn(II), Fe(III), and Ni(II) were not practically adsorbed. The formation of ion pairs of the metal chloro complex anions with the protonated adsorption gels was proposed as the main adsorption process. The gel exhibited selectivity only for precious metals with a remarkably high capacity for Au(III), i.e., 5.63 mol/kg dry gel and comparable capacities, i.e., 0.42 and 0.28 mol/kg for Pd(II) and Pt(IV), respectively. According to the kinetic and electrochemical studies, the adsorption rate of Au(III) was greatly enhanced by the chemical modification. Also, its excellent adsorption characteristics for the precious metals were confirmed by adsorption and elution tests using a column packed with the DMA-PW gel. 相似文献
74.
Benjamin T. Goult Neil Bate Nicholas J. Anthis Kate L. Wegener Alexandre R. Gingras Bipin Patel Igor L. Barsukov Iain D. Campbell Gordon C. K. Roberts David R. Critchley 《The Journal of biological chemistry》2009,284(22):15097-15106
Talin is a large flexible rod-shaped protein that activates the integrin
family of cell adhesion molecules and couples them to cytoskeletal actin. It
exists in both globular and extended conformations, and an intramolecular
interaction between the N-terminal F3 FERM subdomain and the C-terminal part
of the talin rod contributes to an autoinhibited form of the molecule. Here,
we report the solution structure of the primary F3 binding domain within the
C-terminal region of the talin rod and use intermolecular nuclear Overhauser
effects to determine the structure of the complex. The rod domain (residues
1655–1822) is an amphipathic five-helix bundle; Tyr-377 of F3 docks into
a hydrophobic pocket at one end of the bundle, whereas a basic loop in F3
(residues 316–326) interacts with a cluster of acidic residues in the
middle of helix 4. Mutation of Glu-1770 abolishes binding. The rod domain
competes with β3-integrin tails for binding to F3, and the structure of
the complex suggests that the rod is also likely to sterically inhibit binding
of the FERM domain to the membrane.The cytoskeletal protein talin has emerged as a key player, both in
regulating the affinity of the integrin family of cell adhesion molecules for
ligand (1) and in coupling
integrins to the actin cytoskeleton
(2). Thus, depletion of talin
results in defects in integrin activation
(3), integrin signaling through
focal adhesion kinase, the maintenance of cell spreading, and the assembly of
focal adhesions in cultured cells
(4). In the whole organism,
studies on the single talin gene in worms
(5) and flies
(6) show that talin is
essential for a variety of integrin-mediated events that are crucial for
normal embryonic development. In vertebrates, there are two talin
genes, and mice carrying a talin1 null allele fail to complete
gastrulation (7).
Tissue-specific inactivation of talin1 results in an inability to activate
integrins in platelets (8,
9), defects in the
membrane-cytoskeletal interface in megakaryocytes
(10), and disruption of the
myotendinous junction in skeletal muscle
(11). In contrast, mice
homozygous for a talin2 gene trap allele have no phenotype, although
the allele may be hypomorphic
(12).Recent structural studies have provided substantial insights into the
molecular basis of talin action. Talin is composed of an N-terminal globular
head (∼50 kDa) linked to an extended flexible rod (∼220 kDa). The
talin head contains a
FERM2 domain (made up
of F1, F2, and F3 subdomains) preceded by a domain referred to here as F0
(2). Studies by Wegener et
al. (30) have shown how
the F3 FERM subdomain, which has a phosphotyrosine binding domain fold,
interacts with both the canonical NPXY motif and the
membrane-proximal helical region of the cytoplasmic tails of integrin
β-subunits (13). The
latter interaction apparently activates the integrin by disrupting the salt
bridge between the integrin α- and β-subunit tails that normally
keeps integrins locked in a low affinity state. The observation that the F0
region is also important in integrin activation
(14) may be explained by our
recent finding that F0 binds, albeit with low affinity,
Rap1-GTP,3 a known
activator of integrins (15,
16). The talin rod is made up
of a series of amphipathic α-helical bundles
(17–20)
and contains a second integrin binding site (IBS2)
(21), numerous binding sites
for the cytoskeletal protein vinculin
(22), at least two actin
binding sites (23), and a
C-terminal helix that is required for assembly of talin dimers
(20,
24).Both biochemical (25) and
cellular studies (16) suggest
that the integrin binding sites in full-length talin are masked, and both
phosphatidylinositol 4,5-bisphosphate (PIP2) and Rap1 have been implicated in
exposing these sites. It is well established that some members of the FERM
domain family of proteins are regulated by a head-tail interaction
(26); gel filtration,
sedimentation velocity, and electron microscopy studies all show that talin is
globular in low salt buffers, although it is more elongated (∼60 nm in
length) in high salt (27). By
contrast, the talin rod liberated from full-length talin by calpain-II
cleavage is elongated in both buffers, indicating that the head is required
for talin to adopt a more compact state. Direct evidence for an interaction
between the talin head and rod has recently emerged from NMR studies by Goksoy
et al. (28), who
demonstrated binding of 15N-labeled talin F3 to a talin rod
fragment spanning residues 1654–2344, an interaction that was confirmed
by surface plasmon resonance (Kd = 0.57 μm)
(28). Chemical shift data also
showed that this segment of the talin rod partially masked the binding site in
F3 for the membraneproximal helix of the β3-integrin tail
(28), directly implicating the
talin head-rod interaction in regulating the integrin binding activity of
talin. Goksoy et al.
(28) subdivided the F3 binding
site in this rod fragment into two sites with higher affinity
(Kd ∼3.6 μm; residues 1654–1848)
and lower affinity (Kd ∼78 μm; residues
1984–2344). Here, we define the rod domain boundaries and determine the
NMR structure of residues 1655–1822, a five-helix bundle. We further
show that this domain binds F3 predominantly via surface-exposed residues on
helix 4, with an affinity similar to the high affinity site reported by Goksoy
et al. (28). We also
report the structure of the complex between F3 and the rod domain and show
that the latter masks the known binding site in F3 for the β3-integrin
tail and is expected to inhibit the association of the talin FERM domain with
the membrane. 相似文献
75.
Boys ML Schretzman LA Chandrakumar NS Tollefson MB Mohler SB Downs VL Penning TD Russell MA Wendt JA Chen BB Stenmark HG Wu H Spangler DP Clare M Desai BN Khanna IK Nguyen MN Duffin T Engleman VW Finn MB Freeman SK Hanneke ML Keene JL Klover JA Nickols GA Nickols MA Steininger CN Westlin M Westlin W Yu YX Wang Y Dalton CR Norring SA 《Bioorganic & medicinal chemistry letters》2006,16(4):839-844
We describe a series of 1,2,4-oxadiazoles, which are potent antagonists of the integrin alpha(v)beta3 and, in addition, show selectivity relative to the other beta3 integrin alpha(IIb)beta3. In whole cells, the majority of these analogs also demonstrated modest selectivity against other alpha(v) integrins such as alpha(v)beta1 and alpha(v)beta6. 相似文献
76.
Khurana P Kumari R Vohra P Kumar A Seema Gupta G Raj HG Dwarakanath BS Parmar VS Saluja D Bose M Vij A Chaudhary NK Adhikari JS Tyagi YK Kohli E 《Bioorganic & medicinal chemistry》2006,14(2):575-583
An enhanced intracellular level of Nitric oxide (NO) is essential to ameliorate several pathological conditions of heart and vasculature necessitating the activation of NOS. We have projected in this report the acetylation of eNOS by polyphenolic peracetates (PA) catalyzed by the novel enzyme acetoxy drug: protein transacetylase (TAase) discovered in our laboratory as an unambiguous way of activating NOS which results in the manifestation of physiological action. The human platelet was chosen as the experimental system in order to validate the aforementioned proposition. PA caused profound irreversible activation of platelet NADPH cytochrome c reductase mediated by TAase. The convincing biochemical evidences are presented to show that PA could cause acetylation of the reductase domain of NOS leading to the activation of eNOS in tune with their specificities to platelet TAase. As a result, the enhanced level of NO due to activation of platelet eNOS by PA was found to inhibit the ADP-induced platelet aggregation. The present studies highlight for the first time the role of PA as the novel potent agent for enhancing the intracellular NO levels. 相似文献
77.
Yuta?Suzuki Dinesh?Adhikari Kazuhito?ItohEmail author Kousuke?Suyama 《Plant and Soil》2014,374(1-2):915-924
Background and aims
Bradyrhizobium japonicum and Bradyrhizobium elkanii dominated soybean nodules in temperate and subtropical regions in Nepal, respectively, in our previous study. The aims of this study were to reveal the effects of temperature on the nodulation dominancy of B. japonicum and B. elkanii and to clarify the relationship between the effects of temperature and the climate-dependent distribution of Bradyrhizobium species.Methods
A laboratory competition experiment was conducted between B. japonicum and B. elkanii strains isolated from the same temperate location in Nepal. A mixture of each strain was inoculated into sterilized vermiculite with or without soybean seeds, and inoculated samples were incubated at 33/27 (day/night) and 23/17 °C. Relative populations in the non-rhizosphere, rhizosphere, and nodules were determined by competitive PCR using specific primers for each strain at 0, 1, 2, and 4 weeks after inoculation.Results
Both separately inoculated B. japonicum and B. elkanii strains formed nodules at both temperatures. Under competitive conditions, B. japonicum strains dominated at low temperature; however, at high temperature, both strains achieved co-nodulation in 1 week, with B. elkanii dominating after 2 weeks. The relative populations of both strains were similar in the non-rhizosphere and rhizosphere at low temperature, but B. elkanii strains dominated in these regions at high temperature.Conclusions
The domination of B. japonicum strains in nodules at the low temperature appeared to be due to preferential infection, while the domination of B. elkanii strains at high temperature appeared to be due to the higher population of B. elkanii in the non-rhizosphere and rhizosphere, in addition to its domination in nodules after co-nodulation. The effects of temperature on the competition between B. japonicum and B. elkanii strains were remarkable and corresponded with the distribution of bradyrhizobial species in Nepal.78.
Gurung S Mamidi S Bonman JM Jackson EW del Río LE Acevedo M Mergoum M Adhikari TB 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》2011,123(6):1029-1041
Tan spot, caused by Pyrenophora tritici-repentis, is a major foliar disease of wheat worldwide. Host plant resistance is the best strategy to manage this disease. Traditionally,
bi-parental mapping populations have been used to identify and map quantitative trait loci (QTL) affecting tan spot resistance
in wheat. The association mapping (AM) could be an alternative approach to identify QTL based on linkage disequilibrium (LD)
within a diverse germplasm set. In this study, we assessed resistance to P. tritici-repentis races 1 and 5 in 567 spring wheat landraces from the USDA-ARS National Small Grains Collection (NSGC). Using 832 diversity
array technology (DArT) markers, QTL for resistance to P. tritici-repentis races 1 and 5 were identified. A linear model with principal components suggests that at least seven and three DArT markers
were significantly associated with resistance to P. tritici-repentis races 1 and 5, respectively. The DArT markers associated with resistance to race 1 were detected on chromosomes 1D, 2A, 2B,
2D, 4A, 5B, and 7D and explained 1.3–3.1% of the phenotypic variance, while markers associated with resistance to race 5 were
distributed on 2D, 6A and 7D, and explained 2.2–5.9% of the phenotypic variance. Some of the genomic regions identified in
this study correspond to previously identified loci responsible for resistance to P. tritici-repentis, offering validation for our AM approach. Other regions identified were novel and could possess genes useful for resistance
breeding. Some DArT markers associated with resistance to race 1 also were localized in the same regions of wheat chromosomes
where QTL for resistance to yellow rust, leaf rust and powdery mildew, have been mapped previously. This study demonstrates
that AM can be a useful approach to identify and map novel genomic regions involved in resistance to P. tritici-repentis. 相似文献
79.
Baicalein (5, 6, 7-trihydroxy-2-phenyl-4H-1-benzopyran-4-one), a naturally occurring flavone present in some of the medicinal plants is known for its potential therapeutic effects, such as cardioprotective, anticancer and anti-inflammatory properties. However, detailed role and mechanisms behind its protective properties against different generators for oxidative stress have not been examined. In the present study, we investigated the possible protective ability of baicalein against the membrane damage caused by reactive oxygen species (ROS) and reactive nitrogen species (RNS) and the mechanisms involved using pulse radiolysis technique. Baicalein offered efficient protection even at a concentration of 10 microM towards membrane damage caused by lipid peroxidation induced by the gamma-radiation, peroxyl radicals, ascorbate-Fe2+ and peroxynitrite in rat liver mitochondria and heart homogenate. To elucidate its reaction mechanisms with biologically relevant radicals, transient absorption spectroscopy employing pulse radiolysis technique was used. Baicalein showed fairly high rate constants (3.7 x 10(9), 1.3 x 10(9) and 8.0 x 10(8) dm3 mol(-1) s(-1) for hydroxyl, azidyl and alkylchloroperoxyl radicals, respectively), suggesting that baicalein can act as an effective scavenger of these radicals. In each case, the phenoxyl radical of baicalein was generated. Thus, it was evident that the phenolic moiety of baicalein was responsible for the free radical scavenging process. Baicalein also reacts with linoleic acid peroxyl radical (LOO*), indicating its ability to act as a chain breaking antioxidant. Peroxynitrite-mediated radicals were shown to be reactive towards baicalein and the bimolecular rate constants were 2.5 x 10(7) and 3 x 10(8) dm3 mol(-1) s(-1) for *NO2 and CO3*(-) radicals, respectively. In conclusion, our results revealed the potential of baicalein in protecting mitochondrial membrane against oxidative damage induced by the four different agents. We propose that the protective effect is mediated via scavenging of primary and secondary radicals generated during oxidative stress. 相似文献
80.
Julia Litvinov Anna E. V. Hagström Yubitza Lopez Meenu Adhikari Katerina Kourentzi Ulrich Strych Federico A. Monzon William Foster Philip T. Cagle Richard C. Willson 《Biotechnology letters》2014,36(9):1863-1868
We report a novel, modular approach to immuno-detection based on antibody recognition and PCR read-out that employs antibody-conjugated bacteriophage and easily-manipulated non-pathogenic viruses as affinity agents. Our platform employs phage genetically tagged for in vivo biotinylation during phage maturation that can easily be linked, through avidin, to any biotinylated affinity agent, including full-length antibodies, peptides, lectins or aptamers. The presence of analyte is reported with high sensitivity through real-time PCR. This approach avoids the need to clone antibody-encoding DNA fragments, allows the use of full-length, high affinity antibodies and, by having DNA reporters naturally encapsulated inside the bacteriophage, greatly reduces nonspecific binding of DNA. We validate the efficacy of this new approach through the detection of Vascular Endothelial Growth Factor, a known angiogenic cancer biomarker protein, at attomolar concentrations in bronchoalveolar lavage fluid. 相似文献