Genetic effects on microsatellite diversity in wild emmer wheat (Triticum dicoccoides) at the Yehudiyya microsite,Israel

This study investigated allele size constraints and clustering, and genetic effects on microsatellite (simple sequence repeat, SSR) diversity at 28 loci comprising seven types of tandem repeated dinucleotide motifs in a natural population of wild emmer wheat, Triticum dicoccoides, from a shade vs sun microsite in Yehudiyya, northeast of the Sea of Galilee, Israel. It was found that allele distribution at SSR loci is clustered and constrained with lower or higher boundary. This may imply that SSR have functional significance and natural constraints. Genetic factors, involving genome, chromosome, motif, and locus significantly affected SSR diversity. Genome B appeared to have a larger average repeat number (ARN), but lower variance in repeat number (sigma(ARN)(2)), and smaller number of alleles per locus than genome A. SSRs with compound motifs showed larger ARN than those with perfect motifs. The effects of replication slippage and recombinational effects (eg, unequal crossing over) on SSR diversity varied with SSR motifs. Ecological stresses (sun vs shade) may affect mutational mechanisms, influencing the level of SSR diversity by both processes.     

Microsatellite diversity correlated with ecological-edaphic and genetic factors in three microsites of wild emmer wheat in North Israel

This study was conducted to test the effects of internal (genetic) and external factors on allelic diversity at 27 dinucleotide microsatellite (simple sequence repeat [SSR]) loci in three Israeli natural populations of Triticum dicoccoides from Ammiad, Tabigha, and Yehudiyya, north of the Sea of Galilee. The results demonstrated that SSR diversity is correlated with the interaction of ecological and genetic factors. Genetic factors, including genome (A vs. B), chromosome, motif, and locus, affected average repeat number (ARN), variance in repeat number (sigma), and number of alleles (NA) of SSRs, but the significance of some factors varied among populations. Genome effect on SSR variation may result from different motif types, particularly compound (or imperfect) versus perfect motifs, which may be related to different evolutionary histories of genomes A and B. Ecological factors significantly affected SSR variation. Soil-unique and soil-specific alleles were found in two edaphic groups dwelling on terra rossa and basalt soils across macro- and microgeographical scales. The largest contributions of genetic and ecological effects were found for diversity of ARN and NA, respectively. Multiple regression indicated that replication slippage and unequal crossing over could be important mutational mechanisms, but their significance varied among motifs. Edaphic stresses may affect the probability of replication errors and recombination intermediates and thus control diversity level and divergence of SSRs. The results may indicate that SSR diversity is adaptive, channeled by natural selection and influenced by both internal and external factors and their interactions.     

More injuries in left-footed individual lizards and Sphenodon

In lizards and Sphenodon , often the fourth toes of individuals with intact tails have more subdigital lamellae on the right than on the left side, and the opposite situation frequently occurs in individuals with injured tails. The difference between intact and injured individuals in morphological directional asymmetry was statistically significant ( P <0.05) in 11.4% among 193 species from various lizard families. Lizard families varied in extent and direction of association, but no phylogenetic constraints were detected within genera. Statistical significance was greater in samples from homogenous geographic origin than from heterogeneous ones. Among gekkonid species, the difference was stronger in those with cursorial (terrestrial) habits, than in those with scansorial (rupestral or arboreal) habits. In Scincidae, loss seems more often lethal in left-footed than in right-footed individuals. Statistically significant associations between morphological left-side dominance and tail injury exist also in three independent lineages with reduced limbs (Anguidae, Scincidae and Teidae). Hence such association is probably not a result of limb function. Rather, left-side dominance seems to be the symptom of an unknown, perhaps organism-wide, detrimental trait. Polymorphism in morphological dominance existed in all species, suggesting advantages and disadvantages in different situations to both phenotypes. We propose the hypothesis that an inversion of side dominance may occur in a single trait without systematic inversion of side dominance in all traits of the body. Inversion in a single trait causes incompatibility in multiple-trait functions. Such a mechanism, rather than cultural conventions, could increase accident proneness also in left-handed Homo sapiens , and could explain increased proneness to accident and warfare mortality in left-handed men, beyond the possible involvement of cultural factors.     

Natural selection causing microsatellite divergence in wild emmer wheat at the ecologically variable microsite at Ammiad, Israel

Genetic diversity at 28 microsatellite loci was studied in a natural population of Triticum dicoccoides at the Ammiad microsite, north of the Sea of Galilee, Israel. This microsite was subdivided into four major habitats, North, Valley, Ridge and Karst, and further subdivided into nine subhabitats. The units thus defined showed strong and highly significant differentiation in ecological factors; in particular with respect to cover, proximity and height of rocks, and surface soil moisture after early rains. The results showed that allele distributions at microsatellite loci were nonrandom and associated with habitats. Significant genetic differentiation and variation in repeat number were found among subpopulations in the four major habitats and nine subhabitats. Habitat-specific and -unique alleles and linkage disequilibria were observed in the Karst subpopulation. The subpopulations dwelling in drier habitats and subhabitats showed higher genetic diversities at microsatellite loci. These results suggest that natural selection, presumably through aridity stress, acts upon microsatellite divergence predominantly on noncoding sequences, thereby contributing to differences in fitness. Received: 9 September 1999 / Accepted: 16 September 1999     

Morphometrics of speciating mole rats: Adaptive differentiation in ecological speciation

The morphometrics of subterranean mole rats, Spalax ehrenbergi superspecies in Israel, were studied. A total of 42 skull and body variables of 327 adults from 44 populations across the ranges of the 4 chromosomal species (2n = 52, 54, 58 and 60) were measured. The results showed: a. in general, significantly higher morphological values in males than in females; b. significant interspecific quantitative diffferences in 15 skull variables of males, and in 3 of females; but no qualitative diagnosis of any of the species; c. an intercorrelation between most skull variables at different orgamsmal levels, and a uniform and complete correlation with weight; d. a statistical discrimination in both metric and nonmetric multivariate analyses between most species pairs; e. an indication of high morphological similarity based on the relatively small multivariate Mahalanobis distances of dissimilarity between species; f. a possible explanation for a significant part of the variance in most skull and body variables resulting from a combination of temperature variables and water availability; g. a declination in size in skull and body variables between northern and southern species; h. the order of speciation events to be 2n = (54, 52)→58→60. Based on these results we conclude: 1. no morphological breaks are associated with the speciation of the S. ehrenbergi complex, and morphological differentiation is quantitative rather than qualitative between the species: 2. morphological diversity is significantly explained by climatic selection, and is therefore adaptive and explicable on even very low selective pressures over evolutionary time: 3. the morphospecies seem unable to reliably reflect the biological species in the S. ehrenbergi complex, and morphological differentiation, at least in this superspecies, evolves in a gradual rather than a punctual way: this would conform with Neo-Darwinian evolutionary theory.     

Brain size diversity in adaptation and speciation of subterranean mole rats

We have tested brain size diversity and encephalization in the actively speciating subterranean mole rats of the Spalax ehrenbergi superspecies in Israel. Our sample involved 171 individuals comprising 12 populations and 4 chromosomal species (2n = 52, 54, 58 and 60) distributed parapatrically from the northern Mediterranean region southward (2n = 52, 54→+58→60) into increasingly more arid and unpredictable climatic regimes, approaching the Negev Desert. Our results indicate that relative brain size and encephalization are highest in 2n = 60 as compared with 2n = 52, 54 and 58. We hypothesize that this pattern is adaptive and molded by natural selection. Brain evolution and higher encephalization in the S. ehrenbergi complex appears to be associated with increasing ecological stresses of aridity and climatic unpredictability.     

Adaptive variation in structure and function of kidneys of speciating subterranean mole rats

Summary We report on kidney structure and function in subterranean mammals of four chromosomal species (2n=52, 54, 58 and 60) belonging to the Spalax ehrenbergi superspecies, in relation to their speciation and adaptive radiation from mesic (2n=52) to xeric (2n=60) environments in Israel. Structural variables measured involved: (1) Relative Medullary Thickness, (RMT); (2) Relative Kidney Weight. (RKW); and (3) Percentage of Kidney out of Body Weight (PKW). Functional variables involved: (i) Urine Solid Concentration, (USC); and (ii) Urine Osmotic Concentration (UOC). The results for chromosomal species 2n=52, 54, 58 and 60 indicated nonsignificant increase southward for RMT, but displayed significant increase along the same transect for RKW, PKW, and USC. The UOC was significantly lower in mesic 2n=52 as compared to the other three species when experimental animals were fed in the laboratory on regular carrot food. However, protein stress food (soybean) and salt stress of 0.45 mol NaCl, caused significant, three and a half fold increase of UOC in 2n=52, 54 and 58; but four and a half fold increase in 2n=60, significantly higher than in the other three species. We conclude that both structurally and functionally, the kidneys differentiated adaptively during the Pleistocene evolution of S. ehrenbergi in Israel, in accordance with aridity stress and halophyte food resources towards the desert. Nevertheless, Spalax generally shows clear upper limits in kidney structural and functional capacities, preventing it from colonizing the true desert, south of the 100 mm isohyete.     

Genetic structure and climatic correlates of desert landsnails

Summary Allozymic variation in proteins encoded by 20 loci was analyzed electrophoretically in 126 adult specimens representing 4 populations and 2 species of the desert landsnail Trochoidea, subgenus Xerocrassa, in a variable desert climatic back-ground of temperature and water factors. In addition, geographic variation in 3 morphological body variables of these snails was also studied. The results indicate that: (i) Most loci (55%) were strongly polymorphic; (ii) A large proportion of the polymorphic loci (55%) displayed fixation of alternative alleles either within or between species; (iii) Most of the variant alleles (75%) were not widespread, indicating sharp local and regional geographic differentiation; (iv) Southward progressive trends were found in genic diversity, some allele frequencies, shell banding and body characters. (v) The mean estimates of genetic indices are: not of alleles per locus, A=1.69; proportion of polymorphism per population P=0.41, and proportion of heterozygosity per individual, H=0.07; (vi) The level of P increases and that of H decreases southward; (vii) The amount of variation in different functional elasses of enzymes follows the Gillespie-Kojima and partly the Johnson hypotheses; (viii) Coefficients of genetic disfance, D, between populations are high, , range 0.05–0.26. D's within species may be higher than between species. Likewise, D's from the northernmost population increase progressively southwards; (ix) Significant gametic phase disequilibria occur in several populations in both species; (x) Deviations from Hardy-Weinberg equilibria were found in several loci in some populations in both species; (xi) A statistically significant (P<0.001) amount of morphological variation of all 3 body variables occurs within and between species. Body diameter decreases with evaporation. (xii) P, H, and allozymic variation in several gene loci are significantly correlated with climatic variable, primarily related to some water factors and secondarily to temperature; (xiii) Shell banding was negatively correlated with solar radiation; and (xiv) Few correlations between allozymic and morphological variations were revealed.The pattern of genetic variation of Trochoidea (Xerocrassa) vetzenii and T. (X) erkelii suggests that (a) climatic selection plays a major role in allozymic (and morphological) population structure and differentiation; (b) variation in allozyme and visual polymorphisms may provide the genetic basis for the complex physiological adaptations of landsnails enabling them to survive in hostile, hot and dry deserts, and is therefore partly adaptive rather than neutral.     

Correlation of ecological factors and allozymic variations with resistance toErysiphe graminis hordei inHordeum spontaneum in Israel: Patterns and application

The association of ecological factors and allozymic markers of wild barley,Hordeum spontaneum, with genotypes varying in resistance to 3 cultures of the pathogenErysiphe graminis hordei, which incites the disease powdery mildew of barley, were explored theoretically and practically. The study involved 275 accessions comprising 16 populations largely representing the ecological range ofH. spontaneum in Israel. From earlier studies of allozymic variation and disease resistance it now becomes apparent that genetic polymorphisms for resistance toE. graminis hordei are structured geographically, and are predictable by climatic as well as allozymic variables. Three-variable combinations of temperature and water factors explain significantly 0.32 of the spatial variance in disease resistance between localities. Also, several allozyme genotypes, singly or in combination, are significantly associated with disease resistance. A high correlation was found between the standard deviation of infection types of the culture of the pathogen from Israel, and allozymic polymorphism,P (r_s = 0.86, p < 0.001). Consequently, the IsraelH. spontaneum populations, growing in the center of diversity of the species, contain large amounts of unexploited disease resistance polymorphism. These could be effectively screened and utilized for producing resistant barley varieties by using ecological factors and allozymic variants as guidelines.     

Spatiotemporal allozyme divergence caused by aridity stress in a natural population of wild wheat, Triticum dicoccoides, at the Ammiad microsite, Israel

Spatiotemporal diversity at 35 allozyme loci was assayed over 6 years in 1,207 individuals of wild emmer wheat (Triticum dicoccoides)from a microgeographic microsite, Ammiad, north Israel. This analysis used new methods and two additional sample sets (1988 and 1993) and previous allozymic data (1984–1987). This microsite includes four major habitats (North-facing slope, Valley, Ridge, and Karst) that show topographic and ecological heterogeneity. Significant temporal and spatial variations in allele frequencies and levels of genetic diversity were detected in the four subpopulations. Significant associations were observed among allele frequencies and gene diversities at different loci, indicating that many allele frequencies change over time in the same or opposite directions. Multiple regression analysis showed that variation in soil-water content and rainfall distribution in the growing season significantly affected 10 allele frequencies, numbers of alleles at 8 loci, and gene diversity at 4 loci. Random genetic drift and hitchhiking models may not explain such locus-specific spatiotemporal divergence and strong allelic correlation or locus correlation as well as the functional importance of allozymes. Natural ecological selection, presumably through water stress, might be an important force adaptively directing spatiotemporal allozyme diversity and divergence in wild emmer wheat at the Ammiad microsite. Received: 3 July 2000 / Accepted: 1August 2000