BRD4 Promotes DNA Repair and Mediates the Formation of TMPRSS2-ERG Gene Rearrangements in Prostate Cancer

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Association of Periodontitis with the Concentration Levels of Germanium and Tin in Hair

The purpose of this study was to investigate whether or not the concentration levels of certain kinds of trace elements in hair are associated with periodontitis. We studied a total of 109 participants, which are composed of 25 participants with periodontitis and 84 participants without periodontitis. Periodontal conditions were assessed by measuring the periodontal clinical attachment loss and pocket depth, which were determined at six sites of all teeth. Periodontitis was defined according to the criteria of periodontitis proposed by CDC-AAP. The hair samples were washed with acetone, water, and extran (1%v/v), and then aliquots of hair samples were wet-ashed. This sample solution was analyzed by Perkin-Elmer Mass Spectrometer. The odds ratios and 95% confidence intervals of the concentration levels of trace elements for periodontitis were calculated by multivariate logistic regression analysis. After adjusting all confounders, it was found that the higher concentration level of germanium in hair was significantly and positively associated with periodontitis (odds ratio [OR] 7.12; 95% confidential interval [CI] 2.03–25.00). The higher concentration level of tin in hair was significantly and negatively associated with periodontitis (OR 0.27; 95% CI 0.08–0.94). It was concluded that there was a significant relationship between periodontitis and the concentration level of germanium and tin in hair.     

Fish and macroinvertebrate assemblages reveal extensive degradation of the world's rivers

Rivers suffer from multiple stressors acting simultaneously on their biota, but the consequences are poorly quantified at the global scale. We evaluated the biological condition of rivers globally, including the largest proportion of countries from the Global South published to date. We gathered macroinvertebrate- and fish-based assessments from 72,275 and 37,676 sites, respectively, from 64 study regions across six continents and 45 nations. Because assessments were based on differing methods, different systems were consolidated into a 3-class system: Good, Impaired, or Severely Impaired, following common guidelines. The proportion of sites in each class by study area was calculated and each region was assigned a Köppen-Geiger climate type, Human Footprint score (addressing landscape alterations), Human Development Index (HDI) score (addressing social welfare), % rivers with good ambient water quality, % protected freshwater key biodiversity areas; and % of forest area net change rate. We found that 50% of macroinvertebrate sites and 42% of fish sites were in Good condition, whereas 21% and 29% were Severely Impaired, respectively. The poorest biological conditions occurred in Arid and Equatorial climates and the best conditions occurred in Snow climates. Severely Impaired conditions were associated (Pearson correlation coefficient) with higher HDI scores, poorer physico-chemical water quality, and lower proportions of protected freshwater areas. Good biological conditions were associated with good water quality and increased forested areas. It is essential to implement statutory bioassessment programs in Asian, African, and South American countries, and continue them in Oceania, Europe, and North America. There is a need to invest in assessments based on fish, as there is less information globally and fish were strong indicators of degradation. Our study highlights a need to increase the extent and number of protected river catchments, preserve and restore natural forested areas in the catchments, treat wastewater discharges, and improve river connectivity.     

D-Erythroascorbic acid is an important antioxidant molecule in Saccharomyces cerevisiae

D-Arabinono-1,4-lactone oxidase catalysing the final step of D-erythroascorbic acid biosynthesis was purified from the mitochondrial fraction of Saccharomyces cerevisiae. Based on the amino acid sequence analysis of the enzyme, an unknown open reading frame (ORF), YML086C, was identified as the ALO1 gene encoding the enzyme. The ORF of ALO1 encoded a polypeptide consisting of 526 amino acids with a calculated molecular mass of 59493Da. The deduced amino acid sequence of the enzyme shared 32% and 21% identity with that of L-gulono-1,4-lactone oxidase from rat and L-galactono-1,4-lactone dehydrogenase from cauliflower, respectively, and contained a putative transmembrane segment and a covalent FAD binding site. Blot hybridization analyses showed that a single copy of the gene was present in the yeast genome and that mRNA of the ALO1 gene was 1.8kb in size. In the alo1 mutants, D-erythroascorbic acid and the activity of D-arabinono-1,4-lactone oxidase could not be detected. The intracellular concentration of D-erythroascorbic acid and the enzyme activity increased up to 6.9-fold and 7.3-fold, respectively, in the transformant cells carrying ALO1 in multicopy plasmid. The alo1 mutants showed increased sensitivity towards oxidative stress, but overexpression of ALO1 made the cells more resistant to oxidative stress.     

A novel RUNX2 mutation in exon 8, G462X,in a patient with Cleidocranial Dysplasia

To identify a novel mutation of Runx2 gene in Cleidocranial Dysplasia (CCD) patients and to characterize the functional consequences of this mutation. The subjects consisted of 12 Korean CCD patients. After oral epithelial cells were collected using a mouthwash technique, genomic DNA was extracted. Screening for Runx2 mutation was performed using direct sequencing of polymerase chain reaction (PCR) products for exons 1‐8. Restriction fragment length polymorphism (RFLP) analysis was performed to confirm the novel mutation. For functional studies, we performed luciferase assay for Runx2 transacting activity, cyclohexamide chase assay for Runx2 protein stability, real‐time PCR for mRNA level of Runx2 downstream bone marker genes, and alkaline phosphatase (ALP) staining assay in mesenchymal stem cells for osteoblast differentiation. Of the 12 patients, seven showed Runx2 mutations reported previously and four showed no mutation. A novel mutation, G462X in exon 8, which was located in the C‐terminus of proline/serine/threonine‐rich (PST) domain, was found in one patient. In the luciferase assay, Runx2 transacting activity was decreased in Runx2‐G462X transfected cells. In the cyclohexamide chase assay, Runx2‐G462X mutation reduced the stability of Runx2 protein. Expression of the bone marker genes (osteocalcin, ALP, Type I collagen αI, matrix metalloproteinase‐13, bone sialoprotein, and osteopontin) decreased in G462X‐transfected cells. In the ALP staining assay, osteoblast differentiation was reduced in Runx2‐G462X overexpressed cell. The G462X mutation might reduce the Runx2 transacting activity, lower the protein stability, downgrade the expression of bone marker genes, and eventually diminish osteoblast differentiation in CCD patients.     

Temperature-dependent development and oviposition models of Illeis koebelei (Coleoptera: Coccinellidae)

The yellow ladybeetle, Illeis koebelei Timberlake, is a potential biological agent for powdery mildew. The objective of this study was to construct development and oviposition models of I. koebelei. Development experiment was conducted at eight temperatures ranging from 15.4 to 39.5?°C. Development rates were well fitted with linear and nonlinear models. Lower developmental thresholds for egg, first instar, second instar, third instar, and fourth instar larva, pre-pupa, pupa, and total immature stage were estimated to be 3.6, 12.7, 12.1, 11.3, 11.3, 12.8, 14.7, and 14.2?°C, respectively. Their respective thermal requirements in degree days (DD) were 86.6, 16.0, 22.5, 30.2, 49.3, 14.5, 43.8 and 217.4, respectively. Survivorship was the highest at 25.1?°C for immatures. Oviposition experiment was conducted at nine temperatures, ranging from 15.4 to 35.3?°C. Mean fecundity ranged from 18.6 eggs at 29.3?°C to 205.3 eggs at 20.3?°C. It was well described by extreme value function. Adult survival and cumulative oviposition rates of I. koebelei were fitted to a sigmoid function and a two-parameter Weibull function, respectively. Findings of this study provide basic information for ecology of I. koebelei. They can be used to optimize environmental conditions for mass-rearing and shipping, comparing optimal occurrence conditions between I. koebelei and powdery mildew, and forecasting phenology and population dynamics of I. koebelei in the fields.     

Temperature-dependent development and oviposition models of Leptocorisa chinensis Dallas (Hemiptera: Alydidae)

Leptocorisa chinensis Dallas (Hemiptera: Alydidae) is known to cause pecky rice by sucking panicles of milk stage of rice. Based on its continuous spread and expanded damage area in Asian countries such as Japan with high reproduction potential, it is highly likely that L. chinensis will become an important rice pest in the near future. However, limited information is available to predict its distribution and occurrence. Thus, the objective of this study was to develop models for their development and oviposition. We investigated the development of L. chinensis immatures (from egg to adult) at 11 constant temperatures ranging from 16.2 to 35.3 °C and the oviposition of female adults at five constant temperatures ranging from 22.3 to 35.3 °C in this study. For L. chinensis immatures, the lower developmental threshold temperature, optimal developmental temperature, upper developmental threshold temperature were 12.7, 32.3, and 37.6 °C, respectively. The highest survival rate of immatures was observed at temperature of 25.2 °C and the highest mean total fecundity was 585.8 at 28.0 °C. This study provides basic information for the ecology of L. chinensis. It is applicable to forecast the phenology of its populations in the fields and to predict its future distribution under global warming.