Technical communication: Determination of cuprous ions in bacterial leachates and for environmental monitoring

A sensitive and precise spectrophotometric method has been developed for the determination of copper(I) in bacterial leach liquors produced by the action of Thiobacillus ferrooxidans and T. thiooxidans on copper ores. In this method bicinchoninic acid (BCA) has been used as the chromogenic reagent which produces a stable purple complex with Cu(I) which was found to obey Beer's Law and with _max at 560 nm. The coloured complex has a molar extinction coefficient () value of 6.6 × 10³ l mol^–1 cm^–1; specific absorptivity () value of 0.104 ml^–1 g cm^–1 and the Sandell sensitivity (S) value was 0.0096 g cm². Optimal conditions for development of coloration/sensitivity were determined. Interferences due to cations and anions were investigated and various masking agents for alleviating their inhibition were studied. The method has been found very useful in determining ratios of Cu(I) to Cu(II) in bacterial leach liquors and should play a significant role in determining the reaction mechanisms of biological leaching and for environmental monitoring.     

Potential protective effects of melatonin on bone marrow of rats exposed to cytotoxic drugs

Myelosuppression is the most serious, dose limiting, toxicity of cytotoxic drugs. Efforts to protect the bone marrow have been only variably successful, and no agreement exists on how to approach this problem. Melatonin, the major hormonal product of the pineal gland, is supposed to have both chemoprotective and myelostimulatory effects. This experimental study was carried out to test these two effects on the bone marrow of rats, daily intraperitoneally injected with 100 microg melatonin. Injection of 10 mg aracytin for 10 days produced a significant (P < 0.01) decrease in red blood cells count (RBCs), total leucocytic count, as well as platelets count. When melatonin was injected along with aracytin, it would significantly increase (P < 0.05) RBC count and (P < 0.01) blood platelet count. Injection of melatonin after aracytin treatment would significantly increase (P < 0.01) RBC, total leucocytic and platelet counts in comparison with rats treated with aracytin only. The effects of melatonin were more clear in rats treated with it after aracytin injection than those treated with melatonin and aracytin at the same time. Furthermore, it was found that aracytin produced a significant (P < 0.01) decrease in serum total proteins, albumin, and significantly increased the (P < 0.01) albumin/globulin ratio. Melatonin injection would significantly increase (P < 0.01) total protein, globulin, and significantly decrease (P < 0.01) the albumin/glubulin ratio when injected either with aracytin or after aracytin treatment. These results indicate that melatonin protects bone marrow, lymphoid tissues from damaging effect of cytotoxic drugs, as well as stimulating the suppressed bone marrow.     

乌鲁木齐达坂城山区地衣生态位特征的研究

为揭示达坂城山区地衣对生境资源的利用状况及竞争程度,该研究在野外设置30个样方并调查其物种盖度数据,利用生态位宽度、生态位重叠指数及排序分析,探讨达坂城山区地衣的生态位特征及环境影响因子。结果表明:(1)达坂城山区生态位最宽的为丽黄鳞衣(Rusavskia elegans)和内卷野粮衣(Circinaria contorta),对不同环境具有较强的适应性,其他地衣物种生态位宽度较窄,对环境资源利用程度低。(2)物种间生态位重叠值整体偏低,生态位重叠值较高的物种对极少,地衣物种生态位分化程度高,物种间竞争不激烈。(3)生态位较宽的物种与多数物种之间都存在生态位重叠,但重叠值较低; 一些生态位较窄的物种与其他物种之间的生态位重叠值较高; 生态位重叠和生态位宽度之间并无直接的线性关系。(4)地衣物种沿海拔梯度分布具有差异,海拔、光照强度、湿度、风速和人为干扰是本地区地衣群落物种生态位特征差异的主导环境因子。综上所述,达坂城山区地衣物种由于生境资源的竞争占据各自独特的生态位,形成了生态位的分化,群落较为稳定,沿海拔梯度的生境条件差异是物种差异分布的重要原因。该研究可为地衣群落构建研究提供理论依据,并对该地区地衣物种的多样性和生境保护具有重要意义。     

阿尔泰山两河源自然保护区森林生态系统朽木生地衣群落的数量分类

应用双向指示种分析和除趋势对应分析对阿尔泰山两河源国家级自然保护区的朽木生地衣群落进行了数量分类。初步结果表明,该自然保护区朽木生地衣共有43种,隶属于5目、14科、20属,它们组成了以下4个地衣群落。群落(Ⅰ):分布在样点1、2、3、4、5中,包括15种地衣种类,命名为对开蜈蚣衣+半羽蜈蚣衣+红心黑蜈蚣衣群落。群落(Ⅱ):分布在样点6、7、8、9、11中,包括25种地衣,命名为尖头石蕊+粉石蕊+矮石蕊群落。群落(Ⅲ):由样点10、12、13、14、16组成,常见的地衣种类有19个种,命名为蜡黄橙衣+茎口果粉衣+冷杉粉衣群落。群落(Ⅳ):包括样点15、17、18、19和20,由22个地衣种组成。命名为疑小梅衣+同色黄烛衣+脱落网衣群落。群落Ⅰ和群落Ⅱ的相似性最高为0.723,其次为群落Ⅰ和群落Ⅲ为0.609,群落Ⅲ和群落Ⅳ之间的相似性最低为0.262。群落Ⅲ的多样性最大为1.954;其次为群落Ⅱ和群落Ⅰ,分别为1.742和我1.685,群落Ⅳ的多样性最低为0.543。各群落的相似性和多样性之间的差异与其所处环境和朽木树种的多样性有关。同时发现在研究地区的朽木生地衣群落的分布与海拔高度、朽木腐蚀程度、朽木大小、森林郁闭度等因子具有密切的关系。     

Phylogenetic and Molecular Clock Analysis of Dengue Serotype 1 and 3 from New Delhi,India

Dengue fever is the most prevalent arboviral disease in the tropical and sub-tropical regions of the world. The present report describes molecular detection and serotyping of dengue viruses in acute phase blood samples collected from New Delhi, India. Phylogenetic and molecular clock analysis of dengue virus serotype 1 and 3 strains were also investigated. Dengue virus infection was detected in 68.87% out of 604 samples tested by RT-PCR between 2011 & 2014. Dengue serotype 1 was detected in 25.48% samples, dengue serotype 2 in 79.56% samples and dengue serotype 3 in 11.29% samples. Dengue serotype 4 was not detected. Co-infection by more than one dengue serotype was detected in 18.26% samples. Envelope gene of 29 DENV-1 and 14 DENV-3 strains were sequenced in the study. All the DENV-1 strains grouped with the American African genotype. All DENV-3 strains were found to belong to Genotype III. Nucleotide substitution rates of dengue 1 and 3 viruses were determined in the study. Time to the most recent common ancestor (TMRCA) of dengue 1 viruses was determined to be 132 years. TMRCA of DENV-3 viruses was estimated to be 149 years. Bayesian skyline plots were constructed for Indian DENV-1 and 3 strains which showed a decrease in population size since 2005 in case of DENV- 1 strains while no change was observed in recent years in case of DENV-3 strains. The study also revealed a change in the dominating serotype in Delhi, India in recent years. The study will be helpful in formulating control strategies for the outbreaks. In addition, it will also assist in tracking the movement and evolution of this emerging virus.     

Somatic embryogenesis and plant regeneration in Pterocarpus marsupium Roxb.

Somatic embryogenesis (SE) has been achieved from hypocotyl-derived callus culture in Pterocarpus marsupium. Ninety percent of hypocotyl explants (excised from 12-day-old in vitro germinated axenic seedlings) produced callus on Murashige and Skoog medium supplemented with 5 μM 2,4-dichlorophenoxyacetic acid and 1 μM a 6-benzyladenine (BA). Induction of SE occurred after transfer of callus clumps (200 ± 20 mg fresh mass) to MS medium supplemented with BA at 2.0 μM, where a maximum of 23.0 ± 0.88 globular stage embryos per callus clump were observed after 4 weeks of culture. Subculturing of these embryos on MS medium supplemented with 0.5 μM BA, 0.1 μM α-naphthalene acetic acid and 10 μM abscisic acid significantly enhanced the maturation of somatic embryos to early cotyledonary stage, where 21.4 ± 0.32 embryos per callus clump were recorded after 4 weeks of culture. Of 30-well developed somatic embryos, 16.6 ± 0.33 germinated and subsequently converted into plantlets on half-strength MS medium supplemented with 1.0 μM BA. The morphologically normal plantlets with well-developed roots were first transferred to 1/4-liquid MS medium for 48 h and then to pots containing autoclaved soilrite and acclimatized in a culture room. Thereafter, they were transferred to a greenhouse, where 60% of them survived.     

New vistas in GPCR 3D structure prediction

Human G-protein coupled receptors (hGPCRs) comprise the most prominent family of validated drug targets. More than 50% of approved drugs reveal their therapeutic effects by targeting this family. Accurate models would greatly facilitate the process of drug discovery and development. However, 3-D structure prediction of GPCRs remains a challenge due to limited availability of resolved structure. The X-ray structures have been solved for only four such proteins. The identity between hGPCRs and the potential templates is mostly less than 30%, well below the level at which sequence alignment can be done regularly. In this study, we analyze a large database of human G-protein coupled receptors that are members of family A in order to optimize usage of the available crystal structures for molecular modeling of hGPCRs. On the basis of our findings in this study, we propose to regard specific parts from the trans-membrane domains of the reference receptor helices as appropriate template for constructing models of other GPCRs, while other residues require other techniques for their remodeling and refinement. The proposed hypothesis in the current study has been tested by modeling human β2-adrenergic receptor based on crystal structures of bovine rhodopsin (1F88) and human A2A adenosine receptor (3EML). The results have shown some improvement in the quality of the predicted models compared to Modeller software.     

Dairy manure and tillage effects on soil fertility and corn yields

Organic amendments have received renewed attention to improve soil fertility for crop production. A randomized complete block split plot experiment was conducted to evaluate the dairy manure (DM) amendments of soil for corn (Zea mays L. cv. Monsanto 919) production under different tillage systems. Main plot treatments were no-till (NT), conventional tillage (CT), and deep tillage (DT), and subplot treatments were chemical fertilization (DM(0)), and DM at 10Mgha(-1)yr(-1) (DM(10)) and 20Mgha(-1)yr(-1) (DM(20)) with supplemental chemical fertilization. Results show that tillage and DM had significantly reduced bulk density (rho(b)) with greater porosity (f(t)) and hydraulic conductivity (K(fs)) than soils under NT and DM(0). Manuring was effective to improve soil physical properties in all tillage treatments. While manure significantly increased C sequestration, the N concentration was influenced by both tillage and manure with significant interaction. The CT significantly increased P as did the addition of manure. However, with manure, K was significantly increased in all tillage treatments. While tilled soils produced taller plants with higher grain yields, and water-use efficiency than NT soils, manuring, in contrast, increased corn harvest index. Manure exerted significant quadratic effect on corn biomass N and K uptake. The variable effects of tillage and dairy manuring on soil properties and corn growth are most probably related to "transitional period" in which soil ecosystems may have adjusting to a new equilibrium.     

农田生态保留带中小林姬鼠的种群动态和结构

栖息地状况对小型兽类种群动态具有明显影响。在质量好,食物资源丰富,隐蔽条件优良的栖息地中小型兽类具有较高的存活率,种群繁殖时间更长,体重比较高。有关栖息地和种群动态方面国内外已有研究报道（Brown,1988;Corp et al．,1997;Quinn et al．,2003;Schnurr et al．,2004）。