Reconfiguration as a Prerequisite for Survival in Highly Unstable Flow-Dominated Habitats

Unstable and mechanically demanding habitats like wind-exposed open fields or the wave-swept intertidal require rapid adaptive processes to ensure survival. The mechanism of passive reconfiguration was analyzed in two plant models exposed to irregular flow of water or air, two species of the brown seaweed Durvillaea and the giant reed Arundo donax. Irrespective of the surrounding media and the subsequent Reynolds numbers (Re ~ 10⁵ - 10⁷), reconfiguration seems to be the key strategy for streamlining to avoid overcritical drag-induced loads. This passive mechanism is also discussed in the context of the requirement of a maximized surface area for light interception, so that morphological adaptations to rapid reconfiguration represent at least a bifactorial optimization. Both tested plant models exhibited the same principles in streamlining. At a specific threshold value, the proportionality between drag forces and flow velocity can be reduced from the second power close to an almost linear relation. This empirically derived relation could be characterized by a figure of merit or Vogel number (B). A value close to B = -1, resulting in a linear increase of drag force with velocity, was found at higher velocities for both the seaweeds and the giant reed, as well as for a variety of plants described in the literature. It is therefore concluded that the ability to reduce velocity-dependent drag force to a linear relation is a potentially important adaptation for plants to survive in unstable flow-dominated habitats.     

Membrane domains in lymphocytes - from lipid rafts to protein scaffolds

Lateral compartmentalization of the plasma membrane into domains is a key feature of immune cell activation and subsequent immune effector functions. Here, we will review the high diversity of membrane domains, ranging from elementary lipid rafts, envisioned as dynamic and small domains (in the tens of nm), to relatively stable μm-scale membrane domains, which form the immunologic synapse of T lymphocytes. We will discuss the relationship between these different types of plasma membrane domains and how raft lipid- and protein-controlled interactions and cell biological processes cooperate to generate functional domains that mediate lymphocyte activity.     

Identification of cardiac malformations in mice lacking <Emphasis Type="Italic">Ptdsr</Emphasis>using a novel high-throughput magnetic resonance imaging technique

Background  

Congenital heart defects are the leading non-infectious cause of death in children. Genetic studies in the mouse have been crucial to uncover new genes and signaling pathways associated with heart development and congenital heart disease. The identification of murine models of congenital cardiac malformations in high-throughput mutagenesis screens and in gene-targeted models is hindered by the opacity of the mouse embryo.     

Solution stability and degradation pathway of deoxyribonucleoside phosphoramidites in acetonitrile

The impuritiy profiles of acetonitrile solutions of the four standard O-cyanoethyl-N,N-diisopropyl-phosphoramidites of 5'-O-dimethoxytrityl (DMT) protected deoxyribonucleosides (dG(ib), dA(bz), dC(bz), T) were analyzed by HPLC-MS. The solution stability of the phosphoramidites decreases in the order T, dC>dA>dG. After five weeks storage under inert gas atmosphere the amidite purity was reduced by 2% (T, dC), 6% (dA), and 39% (dG), respectively. The main degradation pathways involve hydrolysis, elimination of acrylonitrile and autocatalytic acrylonitrile-induced formation of cyanoethyl phosphonoamidates. Consequently, the rate of degradation is reduced by reducing the water concentration in solution with molecular sieves and by lowering the amidite concentration. Acid-catalyzed hydrolysis could also be reduced by addition of small amounts of base.     

Formation of functional cell membrane domains: the interplay of lipid- and protein-mediated interactions

Numerous cell membrane associated processes, including signal transduction, membrane sorting, protein processing and virus trafficking take place in membrane subdomains. Protein-protein interactions provide the frameworks necessary to generate biologically functional membrane domains. For example, coat proteins define membrane areas destined for sorting processes, viral proteins self-assemble to generate a budding virus, and adapter molecules organize multimolecular signalling assemblies, which catalyse downstream reactions. The concept of raft lipid-based membrane domains provides a different principle for compartmentalization and segregation of membrane constituents. Accordingly, rafts are defined by the physical properties of the lipid bilayer and function by selective partitioning of membrane lipids and proteins into membrane domains of specific phase behaviour and lipid packing. Here, I will discuss the interplay of these independent principles of protein scaffolds and raft lipid microdomains leading to the generation of biologically functional membrane domains.