Comparative osteology of the Danio (Cyprinidae: Ostariophysi) axial skeleton with comments on Danio relationships based on molecules and morphology

Danio is a diverse group of small, colourful and easily bred freshwater fishes native to Southern Asia. Biological interest in danios has increased in recent years because the zebrafish, Danio rerio , has become an important model organism, particularly for studies of vertebrate developmental biology and genetics. Though several phylogenetic studies of Danio have been done on a subset of Danio species, the resulting phylogenies conflict in detail. To examine the utility of osteology for systematics of this group at the species level, we studied the axial skeleton for 11 species of Danio. We analyse our morphological data alone and combined with DNA sequence data for five gene sequences generated in earlier phylogenetic studies. The axial skeleton of Danio exhibits 14 characters that prove useful in phylogenetic analysis. Both molecular and morphological data support the monophyly of the danios included in our analysis and both data sets support the monophyly of two subclades: a deep-bodied group and a slender-bodied group. Separate analysis of molecular and morphological data sets show that the molecular data resolves relationships within the slender subclade whereas the topology of the deep-bodied subclade is determined by morphological data.  © 2002 The Linnean Society of London. Zoological Journal of the Linnean Society , 2002, 135 , 529–546.     

Size and Performance of Juvenile Marine Invertebrates: Potential Contrasts Between Intertidal and Subtidal Benthic Habitats

Newly settled or hatched juveniles of marine benthic invertebratesgenerally experience very high mortality. Juvenile mortalitycan profoundly affect adult populations, but little is knownabout how individual variation in juvenile quality affects performance.Several recent studies have demonstrated that differences insize, larval nutrient stores, or larval feeding history canstrongly affect the performance (measured as growth and survivorship)of juveniles. Additional research suggests that the strengthof the effect of juvenile size on performance may be mediatedby variation in environmental stress in the intertidal, a habitatcharacterized by strong fluctuations in abiotic factors. Themajor sources of juvenile snail mortality are likely to differin intertidal and subtidal habitats; abiotic stresses relatedto exposure, such as desiccation, are important in the intertidalbut far less severe in subtidal environments. Previously observedtrends in hatching or settlement size between intertidal andsubtidal species from three gastropod taxa may be due to differingselective regimes acting on initial juvenile size.     

Plant traits and wood fates across the globe: rotted,burned, or consumed?

Wood represents the defining feature of forest systems, and often the carbon in woody debris has a long residence time. Globally, coarse dead wood contains 36–72 Pg C, and understanding what controls the fate of this C is important for predicting C cycle responses to global change. The fate of a piece of wood may include one or more of the following: microbial decomposition, combustion, consumption by insects, and physical degradation. The probability of each fate is a function of both the abiotic environment and the wood traits of the species. The wood produced by different species varies substantially in chemical, micro- and macro-morphological traits; many of these characteristics of living species have 'afterlife' effects on the fate and turnover rate of dead wood. The colonization of dead wood by microbes and their activity depends on a large suite of wood chemical and anatomical traits, as well as whole-plant traits such as stem-diameter distributions. Fire consumption is driven by a slightly narrower range of traits with little dependence on wood anatomy. Wood turnover due to insects mainly depends on wood density and secondary chemistry. Physical degradation is a relatively minor loss pathway for most systems, which depends on wood chemistry and environmental conditions. We conclude that information about the traits of woody plants could be extremely useful for modeling and predicting rates of wood turnover across ecosystems. We demonstrate how this trait-based approach is currently limited by oversimplified treatment of dead wood pools in several leading global C models and by a lack of quantitative empirical data linking woody plant traits with the probability and rate of each turnover pathway. Explicitly including plant traits and woody debris pools in global vegetation climate models would improve predictions of wood turnover and its feedback to climate.     

Species richness facilitates ecosystem resilience in aquatic food webs

1. Many studies indicate that biodiversity in ecosystems affects stability, either by promoting temporal stability of ecosystem attributes or by enhancing ecosystem resistance and resilience to perturbation. The effects on temporal stability are reasonably well understood and documented but effects on resistance and resilience are not. 2. Here, we report results from an aquatic mesocosm experiment in which we manipulated the species richness and composition of aquatic food webs (macrophytes, macro‐herbivores and invertebrate predators), imposed a pulse disturbance (acidification), and monitored the resistance (initial response) and resilience (recovery) of ecosystem productivity and respiration. 3. We found that species‐rich macroinvertebrate communities had higher resilience of whole‐ecosystem respiration, but were not more resistant to perturbations. We also found that resilience and resistance were unaffected by species composition, despite the strong role composition is known to play in determining mean levels of function in these communities. 4. Biodiversity’s effects on resilience were probably mediated through complex pathways affecting phytoplankton and microbial communities (e.g. via changes in nutrient regeneration, grazing or compositional changes) rather than through simpler effects (e.g. insurance effects, enhanced facilitation) although these simpler mechanisms probably played minor roles in enhancing respiration resilience. 5. Current mechanisms for understanding biodiversity’s effects on ecosystem stability have been developed primarily in the context of single‐trophic level communities. These mechanisms may be overly simplistic for understanding the consequences of species richness on ecosystem stability in complex, multi‐trophic food webs where additional factors such as indirect effects and highly variable life‐history traits of species may also be important.     

Age,sex and beauty: methodological dependence of age‐ and sex‐dichromatism in the great tit Parus major

Carotenoid‐based colour expression is frequently involved in sexual dichromatism, particularly in bird plumage, suggesting a role in sexual selection. Despite much work on expression of the carotenoid‐based ventral plumage coloration of the great tit (Parus major), which represents a popular model in evolution and ecology, a consensus on even the most basic demographic patterns of variation (e.g. age and sex differences) is lacking. This may reflect the use of variable methods for analysing colour variation, although what is not clear, either in this case or in general, is the extent to which these alternative methods are equally effective at describing age‐ and sex‐related dichromatism. Using data obtained over 4 years from a large sample of free‐ranging great tits, we examined how colour‐scoring methodology influences estimates of age‐ and sex‐related dichromatism. We compare: (1) principal components analysis‐derived scores; (2) tristimulus colour variables; (3) a visual model‐independent, carotenoid‐focussed colour score; and (4) two colour scoring methods based on avian visual models, examining how they assess colour variation with respect to age and sex to determine how methodology may influence results. We demonstrate clear age‐ and sex‐dependent expression of this colour trait, both in our own data and in meta‐analyses of results from great tit populations across Europe, and discuss the merits of the various colour scores, which yield very different estimates of the extent of age‐ and sex‐dependent dichromatism. We show variation is likely to be visible to conspecifics and propose a novel, visual model‐derived scoring system for describing variation in carotenoid‐based colour patches, where the perceived signal is divided into independent chromatic and achromatic components, in line with current understanding of visual perception. The present study highlights the impact of colour‐scoring methodology and shows that, as novel measures continue to be developed, researchers should consider carefully how they quantify colour expression. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 101 , 777–796.     

The effects of anthropogenic alteration of nesting habitat on rates of extra‐pair fertilization and intraspecific brood parasitism in Canada Geese Branta canadensis

Parentage studies have shown that alternative reproductive strategies are widespread in many avian taxa that were once thought to be monogamous. Recent anthropogenically mediated habitat change may have disrupted ecological factors, such as breeding density, which have given rise to inter‐ and intraspecific variation in the frequency of extra‐pair fertilization (EPF) and intraspecific brood parasitism (IBP). We used genetic analyses to quantify the incidence of alternative reproductive strategies exhibited within clutches of Canada Geese Branta canadensis maxima nesting in high‐ and low‐density situations in and around urban areas in southern Michigan, USA. We tested the hypothesis that high nesting density would increase the frequency of EPF and IBP. There were no significant differences in rates of EPF and IBP clutches (14 and 26% of clutches, respectively) from nests in high‐density (21.7% EPF, 21.7% IBP) vs. low‐density (5.3% EPF, 31.6% IBP) areas, although high‐density sites had a fourfold higher rate of EPF. Rates of EPF and IBP in high‐density urban areas in Michigan were comparable to rates observed in other species nesting under different ecological conditions. Levels of relatedness between host and parasitic females were higher than expected by chance, suggesting that related females are more tolerant of one another and that host females could gain inclusive fitness benefits from rearing parasitic offspring. Our study highlights the importance of understanding the different costs and benefits associated with alternative behavioural repertoires that may vary as habitats and associated selection pressures are increasingly modified by human activities.     

The role of avian ‘seed predators’ as seed dispersers

Seed dispersal is a central process in plant ecology with consequences for species composition and habitat structure. Some bird species are known to disperse the seeds they ingest, whereas others, termed ‘seed predators’, digest them and apparently play no part in dispersal, but it is not clear if these are discrete strategies or simply the ends of a continuum. We assessed dispersal effectiveness by combining analysis of faecal samples and bird density. The droppings of seed dispersers contained more entire seeds than those of typical seed predators, but over a quarter of the droppings of seed predators contained whole seeds. This effect was further magnified when bird density was taken into account, and was driven largely by one frequent interaction: the Chaffinch Fringilla coelebs, a typical seed predator and the most abundant bird species in the area and dispersed seeds of Leycesteria formosa, a non‐native plant with berry‐like fruits. These results suggest the existence of a continuum between seed predators and seed dispersers.