体液蛋白质组学的研究和应用

蛋白质组学是目前生命科学的研究热点之一.体液中的蛋白质是来源于与其密切接触组织或者细胞的分泌或渗漏,体液蛋白质组的变化能反映这些组织的生理或者病理改变,因此以寻找疾病相关生物标记为主要目标的比较蛋白质组学是蛋白质组学研究的核心内容之一.对近年来各种体液蛋白质组学的研究状况和应用及存在挑战作一综述.     

P—选择素凝集素—EGF功能域的克隆、表达及其单克隆抗体制备

制备特异性抗人P 选择素的凝集素 表皮生长因子 (L EGF)功能域的单克隆抗体。利用特异引物 ,通过RT PCR从外周血血小板中扩增出人P 选择素的L EGF功能域基因 ,将其克隆至pET42b( )载体中 ,测序验证后转染大肠杆菌BL2 1,经诱导表达了C端融合 6×His的蛋白质。融合蛋白质经分离纯化后 ,免疫Balb/c小鼠 ,应用杂交瘤技术 ,通过间接ELISA筛选阳性克隆。获得 3株可稳定分泌抗L EGF功能域单抗的杂交瘤细胞株 (B10、F3和H5 )。其亚型分别为IgG2 、IgG1和IgG3;轻链均为κ型。所获的单抗对LPS刺激活化的人脐静脉内皮细胞均有特异性结合反应 ,并可在体外阻断经凝血酶激活的血小板与中性粒细胞间的粘附。表明所获的单抗可特异性识别结合天然P 选择素 ,具有体外抗活化血小板与中性粒细胞粘附的功能 ,为进一步应用此单抗进行P 选择素结构和功能及抗粘附治疗研究提供了实验基础。     

8-氯腺苷诱导的组蛋白H3K79双甲基化促进NBS1和p21的基因转录激活

组蛋白H3第79位赖氨酸甲基化（H3K79me）修饰有单甲基、双甲基及三甲基3种形式,是常染色质的标志.然而,对于组蛋白H3K79三种甲基化各自在基因转录、DNA损伤修复中所起的作用尚不十分清楚.本研究以8-氯腺苷（8-Cl-Ado）为DNA双链断裂（DNA double-stranded breaks,DSB）诱导剂,采用Western 印迹,在人肺癌细胞H1299检测出了DNA修复分子NBS1、细胞周期检验点相关分子p21,并发现H3K79me1、H3K79me2和H3K79me3三种甲基化修饰的组蛋白明显增加;染色质免疫共沉淀结合实时定量PCR实验显示,只H3K79me2与DNA损伤检验点分子p21、DNA修复分子NBS1的启动子区域相结合,说明H3K79双甲基化修饰与这些基因的转录激活有关.结果提示,在8-氯腺苷引起 DSB时,是H3K79me2、而不是H3K79me1和H3K79me3参与NBS1和p21基因转录激活时的染色质重塑.8-氯腺苷诱导H3K79双甲基化增强、促进H3K79me2所在染色质区域的NBS1和p21基因转录激活可能是8-Cl-Ado抑制肿瘤细胞生长作用机制之一.     

XeCl准分子激光辐照对溶菌酶结构的影响

利用荧光光谱、SDS-PAGE和NMR方法,考察308 nm XeCl准分子激光辐照对溶菌酶结构与活性的影响。使用能量密度为0.3 mJ/mm2的激光辐照溶菌酶,脉冲数分别为25、50、100、200、600、1200、1800、3600和7200。结果表明,用低强度激光辐照(低于200个脉冲)时,溶菌酶的活性出现增高趋势。随着激光辐照脉冲数的进一步增大,溶菌酶的活性又开始逐步降低。激光辐照处理后,溶菌酶的荧光强度发生了与生物活性相对应的先增高再降低现象,说明溶菌酶的高级结构发生了显著变化。SDS-PAGE结果显示,经激光辐照后,溶菌酶出现了分子间的聚合。分析溶菌酶的1H-NMR谱发现,辐照后,溶菌酶色氨酸(Trp)111、Trp63和Trp62的化学位移发生了变化,此结果进一步说明,激光辐照使溶菌酶的高级结构发生了变化。该实验可为激光辐照诱导蛋白质去折叠的研究提供参考。     

中国东北样带(NECT):十年集成与未来挑战

Northeast China Transect (NECT), one of the fifteen International Biosphere-Geosphere Programme (IGBP) terrestrial transects, has been established for 10 years by Prof. Zhang Xin-Shi, through a core project of the IGBP - the Global Change and Terrestrial Ecosystems (GCTE). This transect is located in the mid-latitude semi-arid region, ranging 42-46°N latitude and 110-132癊 longitude. The primary driving force for global change is precipitation and the secondary one is land use intensity. Research progresses have been performed during the past decade in the following aspects: ecological database development, climate and its variability, ecophysiological response of plants to environments, vegetation and landscape changes, biodiversity patterns and their changes, plant functional types and traits with relation to climatic gradient, productivity and carbon dynamics, pollen-vegetation relationship, trace gas emissions, land use and land cover changes, as well as biogeographical and biogeochemical modelling. In order to achieve the higher level of integrated research, the NECT needs the consistent basic data sets within the same framework, further field experiments and observations, integrated simulations of vegetation structure, process and function from patch, landscape to biome scales, intercomparisons of results and simulations within the transect and to other IGBP transects, multidisciplinary research, national and international co-ordinates, and full scientific plan and implementation strategy.     

甘肃东大山自然保护区岩羊生态行为的初步观察

2004年7月和8月,通过样线调查、野外直接跟踪观察和瞬间取样的方法,对东大山自然保护区岩羊(Pseudois nayaur)的种群结构和生态行为进行了初步研究。在观察到的720只岩羊中,719只组成了50个群,最大的群82只,最小的群2只,平均群大小(14.38±15.83)只(n=50)。雌雄性比为1∶0.63,成年雌体、亚成体和幼体之比是1∶0.4∶0.24。岩羊的昼间活动中,上午和下午各有一个瞬间觅食高峰,分别在6:30时和15:30时,中午有一段较长时间的休息期。通过对一个46只岩羊群连续12 d的野外跟踪观察,发现该岩羊群昼间的活动范围基本上在1.47 km2内。对152个自然死亡的雄性岩羊头骨的分析表明,东大山雄性岩羊的自然死亡年龄在7.5~11.5龄,其中9.5龄是其自然死亡的高峰。     

利用序列保守模体和局部构象信息预测转录因子结合位点

转录因子结合位点的计算预测是研究基因转录调控的重要环节,但常用的位置特异得分矩阵方法预测特异性偏低.通过深入分析结合位点的生物特征,提出了一种综合利用序列保守模体和局部构象信息的结合位点预测方法,以极大相关得分矩阵作为保守模体的描述模型,并根据二苷参数模型计算位点序列的局部构象,将两类信息得分组合为多维特征向量,在二次判别分析的框架下进行训练和滑动预测.预测过程中还引入了位置信息量以优化似然得分和过滤备选结果.针对大肠杆菌CRP和Fis结合位点数据的留一法测试结果表明,描述模型的改进和多种信息的融合能有效地改善预测方法的性能,大幅度提高特异性.     

Improved Cardiac Contractility of Human Recombinant Growth Hormone on the Congestive Heart Failure of Pig

1Introduction Congestiveheartfailureisamultipleaetiology,high prevalence,cardiovasculardisorderwithpoorprognosis. Medicaltreatmentofdilatedcardiomyopathyisaimedat alleviatingthesymptomsofheartfailure.Diuretics,ACE inhibitorsandbeta blockershavefavourableeffectson symptoms,exercisecapacityandmortality[1-3].Growth hormone(GH)andinsulin likegrowthfactor(IGF) 1 areinvolvedinseveralphysiologicalprocessessuchas thecontrolofmusclemassandfunction,bodycomposi tionandtheregulationofnutrientmetaboli…     

IaaL基因的维管束特异表达导致烟草茎和根外植体分化能力的改变

我们利用水稻苯丙氨酸解氨酶启动子(AQ630)和吲哚乙酰胺赖氨酸酯合成酶基因(iaaL)构建了维管束特异表达的植物表达载体pBAL1并导入烟草基因组中。比较了对照植株、转基因植株的幼茎和根外植体在组织培养中分化能力的变化,结果表明转基因植株茎外植体的不定芽形成明显受到促进,而转化植株根外植体在不定根发生方面对外源IAA的敏感性下降。     

Foliar modifications induced by inhibition of polar transport of auxin

The effects of auxin polar transport inhibitors,9-hydroxy-fluorene-9-carboxylic acid (HFCA);2,3,5-triiodobenzoic acid(TIBA) and trans-cinnamic acid (CA) on leaf pattern formation were investigated with shoots formed from cultured leaf explants of tobacco and cultured pedicel explants of Orychophragmus violaceus,and the seedlings of tobacco and Brassica chinensis,Although the effective concentration varies with the inhibitors used,all of the inhibitors induced the formation of trumpet-shaped and/or fused leaves.The frequency of trumpet-shaped leaf formation was related to the concentration of inhibitors in the medium.Histological observation of tobacco seedlings showed that there was only one main vascular bundle and several minor vascular bundles in normal leaves of the control,but there were several vascular bundles of more or less the same size in the trumpet-shaped leaves of treated ones.These results indicated that auxin polar transport played an important role on bilateral symmetry of leaf growth.