A vigorous mutant sugarcane (Saccharum sp.) clone Co 527

Summary A vigorous fast growing mutant which ends vegetative growth sixty days earlier than the parent variety Co 527 was isolated from gamma irradiated vegetative buds. The mutant initially segregated but stabilized in the vM₄ generation. Its growth rate was almost fifty per cent higher than Co 527 beginning in the early stages of growth. It produced a significantly higher early shoot population which enabled it to yield a higher number of millable canes at maturity. Economic characters like sucrose content and juice purity remained unaffected. This mutant had a chromosomal basis in that the number was 2 to 3 lower than in the parent variety.Research carried out under the FAO/IAEA Co-ordinated Research Programme on the Improvement of Vegetatively Propagated Plants and Tree Crops through Induced mutations (Research Contract No. 1680)     

闽西南红壤侵蚀区黑莎草功能性状特征及其与土壤因子的关系

为了解黑莎草(Gahnia tristis)在南方红壤侵蚀区的适应状况,测定了长汀县红壤侵蚀区的黑莎草叶片、根系的功能性状及土壤理化性质,并应用数理统计方法分析了黑莎草叶片与根系功能性状之间的相关性,及其对土壤因子的响应。结果表明,黑莎草叶片表型性状在冬夏季间存在显著差异,叶长、叶宽、叶组织密度和叶绿素表现为夏季显著大于冬季,根系表型性状则更具稳定性,冬季的根系养分含量均高于夏季,养分的分配上叶片养分高于根系养分。叶组织密度与叶绿素含量呈显著正相关,与比叶面积呈显著负相关;根组织密度与比根长和比根面积均呈显著负相关,叶片和根系养分间均呈显著正相关,土壤碳、氮、磷含量是影响黑莎草功能性状主要因子。因此,黑莎草可通过调节功能性状以适应环境变化,可作为地带性植物应用于南方红壤侵蚀区的植被恢复和水土流失治理。     

细胞信号网络功能鲁棒的简并性拓扑特征

细胞信号网络对于外界环境的干扰表现出优良的鲁棒性,但是其维持功能鲁棒的内在机制尚未明确,本文研究了细胞信号网络功能鲁棒性的拓扑特征。选择布尔网络模型模拟细胞网络的动态行为,利用网络节点状态的扰动模拟外界环境干扰。基于演化策略探寻不同网络拓扑的功能并分析其在干扰环境下的鲁棒性,采用埃德尔曼提出的基于信息论的计算方法评估网络拓扑的简并度、冗余度和复杂度等拓扑属性,对比分析它们与功能鲁棒度的相关性及作用机理。结果显示,在网络模型的演化过程中,其拓扑简并度与功能鲁棒度显著正相关,相关性水平高于拓扑冗余度与鲁棒度的相关性。并且,随着鲁棒度的提升,网络的节点数和复杂度也随之升高,同样简并度与网络的节点数和复杂度的相关性高于拓扑冗余度与网络的节点数和复杂度的相关性。这说明增加的网络节点以简并的方式同时提高了网络拓扑的鲁棒度和复杂度。因此,细胞网络功能鲁棒性的拓扑特征是简并而不是冗余,简并为解决生物系统的复杂问题提供了有效手段,为人工系统的可靠性设计提供有益的借鉴。     

Effects of species partition on explanatory variables in direct gradient analysis - a case study from Senegal

Abstract. Species-environment data from Senegal, West Africa, are used to study the effects of partition of a large species data set into subsets corresponding to rare and common species respectively. The original data set contains 129 woody plant species from 909 plots and 60 explanatory variables. By applying Canonical Correspondence Analysis to data subsets, marked differences in the forward-selected variables were detected. The highest resemblance was found between the complete species set and the common species subset. Only one of eight selected variables was common to all species and the rare species groups. These findings were tested with partial ordination, applying the selected variables from the original species group (Vb), as variables and covariables to the analyses of common and rare species. For the common species this application resulted in a constrained ordination with higher eigenvalues as compared to the set of variables selected with reference to the common species group. Using the rare species group, the application of Vb gave a much lower sum of eigenvalues than did the ordination with selected variables based on the rare species group only. Evidently, the set of variables selected on the basis of the rare species data were more significant. Hence, the resulting gradients depend on the frequency of the species. Gradient analysis is apparently only valid for groups of species with closely resembling characteristics. This implies that different functional types of species, with different distributions and abundances, respond individually to environmental variation. Extrapolating deduced gradients from one species group to another maybe risky, particularly when used in vegetation modelling.     

Investigating environmental variation and landscape characteristics of an urban–rural gradient using woodland carabid assemblages

Aim To investigate environmental variation and associated assemblage changes of carabid beetles along an urban–rural gradient. Location ‘Quercus–Acer’ (oak–sycamore) woodlands in the city of Birmingham, UK. Methods We collected carabid data using pitfall traps on 12 sites in the city. The traps were run from April–September in 2000, and we collected environmental data on 24 individual variables associated with the individual sites and their landscape context. Changes in carabid assemblages were analysed using repeat measures anova and the environment–species relationships with a Redundancy Analyses (RDA) and Generalized Linear Modelling (GLM). Results We found that: (1) species richness and diversity were lower in the urban and suburban zone and higher in the rural zone; (2) Berger Parker dominance index was higher in the urban and suburban zones; (3) the number of woodland and woodland associated species was significantly higher at the rural end of the gradient; (4) the number of short‐winged (brachypterous) species was highest in the rural zone and decreased towards the urban woodlands, whereas the long‐winged species were more abundant in suburban woodlands; (5) the median weight length (WML) of the assemblage declined along the gradient from the rural to the urban zone, as did the number of large species; and (6) five of the 24 environmental variables showed a significant relationship with variation in the carabid assemblage. At site level the carabid assemblages were related to the level of site disturbance and soil penetrability, whereas site size and amount of woodland and urban land within 5 km of the site were important at a larger landscape scale. Main conclusions The results suggest that urbanization has a deleterious impact on carabid assemblages, causing a reduction in species richness from the rural fringe to the centre of the city. Changes in assemblage structure were related to woodland fragmentation, which led to variations in woodland size, woodland location and site disturbance due to trampling. Large, flightless and specialist woodland species are more susceptible to changes associated with urbanization, presumably due to their longer life spans, lower reproductive rates, more specialized niches and more limited dispersal potential.     

Exploiting redundancy to boost performance in a RAID-10 style cluster-based file system

While aggregating the throughput of existing disks on cluster nodes is a cost-effective approach to alleviate the I/O bottleneck in cluster computing, this approach suffers from potential performance degradations due to contentions for shared resources on the same node between storage data processing and user task computation. This paper proposes to judiciously utilize the storage redundancy in the form of mirroring existed in a RAID-10 style file system to alleviate this performance degradation. More specifically, a heuristic scheduling algorithm is developed, motivated from the observations of a simple cluster configuration, to spatially schedule write operations on the nodes with less load among each mirroring pair. The duplication of modified data to the mirroring nodes is performed asynchronously in the background. The read performance is improved by two techniques: doubling the degree of parallelism and hot-spot skipping. A synthetic benchmark is used to evaluate these algorithms in a real cluster environment and the proposed algorithms are shown to be very effective in performance enhancement. Yifeng Zhu received his B.Sc. degree in Electrical Engineering in 1998 from Huazhong University of Science and Technology, Wuhan, China; the M.S. and Ph.D. degree in Computer Science from University of Nebraska – Lincoln in 2002 and 2005 respectively. He is an assistant professor in the Electrical and Computer Engineering department at University of Maine. His main research interests are cluster computing, grid computing, computer architecture and systems, and parallel I/O storage systems. Dr. Zhu is a Member of ACM, IEEE, the IEEE Computer Society, and the Francis Crowe Society. Hong Jiang received the B.Sc. degree in Computer Engineering in 1982 from Huazhong University of Science and Technology, Wuhan, China; the M.A.Sc. degree in Computer Engineering in 1987 from the University of Toronto, Toronto, Canada; and the PhD degree in Computer Science in 1991 from the Texas A&M University, College Station, Texas, USA. Since August 1991 he has been at the University of Nebraska-Lincoln, Lincoln, Nebraska, USA, where he is Professor and Vice Chair in the Department of Computer Science and Engineering. His present research interests are computer architecture, parallel/distributed computing, cluster and Grid computing, computer storage systems and parallel I/O, performance evaluation, real-time systems, middleware, and distributed systems for distance education. He has over 100 publications in major journals and international Conferences in these areas and his research has been supported by NSF, DOD and the State of Nebraska. Dr. Jiang is a Member of ACM, the IEEE Computer Society, and the ACM SIGARCH. Xiao Qin received the BS and MS degrees in computer science from Huazhong University of Science and Technology in 1992 and 1999, respectively. He received the PhD degree in computer science from the University of Nebraska-Lincoln in 2004. Currently, he is an assistant professor in the department of computer science at the New Mexico Institute of Mining and Technology. He had served as a subject area editor of IEEE Distributed System Online (2000–2001). His research interests are in parallel and distributed systems, storage systems, real-time computing, performance evaluation, and fault-tolerance. He is a member of the IEEE. Dan Feng received the Ph.D degree from Huazhong University of Science and Technology, Wuhan, China, in 1997. She is currently a professor of School of Computer, Huazhong University of Science and Technology, Wuhan, China. She is the principal scientist of the the National Grand Fundamental Research 973 Program of China “Research on the organization and key technologies of the Storage System on the next generation Internet.” Her research interests include computer architecture, storage system, parallel I/O, massive storage and performance evaluation. David Swanson received a Ph.D. in physical (computational) chemistry at the University of Nebraska-Lincoln (UNL) in 1995, after which he worked as an NSF-NATO postdoctoral fellow at the Technical University of Wroclaw, Poland, in 1996, and subsequently as a National Research Council Research Associate at the Naval Research Laboratory in Washington, DC, from 1997–1998. In 1999 he returned to UNL where he directs the Research Computing Facility and currently serves as an Assistant Research Professor in the Department of Computer Science and Engineering. The Office of Naval Research, the National Science Foundation, and the State of Nebraska have supported his research in areas such as large-scale scientific simulation and distributed systems.     

The first record and occurrence of Stagnicola turricula (Held, 1836) (Gastropoda: Pulmonata: Lymnaeidae) in Upper Silesia (Southern Poland) in relation to different environmental factors

The degradation of freshwater environments, e.g.: eutrophication, drainage, water pollution, has led to the decline of lymnaeid species distribution. Some of them are recorded in the Red Book and Red List of species as rare, vulnerable or legally protected. The survey was carried out in Upper Silesia (Southern Poland), which is one of the biggest coal basins in the world. This region is devoid of natural water bodies; only reservoirs of an anthropogenic origin are common. Anthropogenic reservoirs, which are not very degraded, constitute important lentic habitats in Upper Silesia and they provide refuges for wildlife including rare and vulnerable molluscan species. This survey uncovered the first occurrence of Stagnicola turricula in the anthropogenic reservoirs in this area. S. turricula has been subdominant in molluscan communities. Sixteen molluscan species, including 11 gastropod and 5 bivalve species, were recorded at the sampling sites. Based on a redundancy analysis (RDA), the organic matter content in the bottom sediments and pH were the parameters most associated (statistically significant) with the distribution of molluscan species including S. turricula.     

Vegetation of ant-hills in a mountain grassland:effects of mound history and of dominant ant species

Vegetation in grasslands with well-developed long-lastingant-hills in the Slovenské Rudohorie Mts., Slovakia, was studiedin relation to (i) position on the mound, (ii) ant speciesforming the mound, and (iii) history of the mound. Permanent plotrecordings of mound size and dominant ant species started fifteen years priorthe study began provided information on the history of individual mounds.The mound vegetation bears a striking similarity to vegetation insimilar habitats across a large part of Europe due to presence of species suchas Agrostis capillaris, Dianthusdeltoides, Polytrichum commune agg.,Thymus pulegioides, and Veronicaofficinalis. Out of the three major ant species-groups presentat the site (Lasius flavus, Tetramoriumcaespitum and Formica spp.), L.flavus had the most pronounced and the most lasting effect on themound vegetation. The dominance of the plant species listed above increased withthe time span over which the mound was inhabited by L.flavus. The effects of other species on vegetation composition,though discernible from short-term observation, disappeared over severalyears. The mounds proper did not differ from the undisturbed grassland in theproportion of myrmecochorous plants or plants with specific seed size ordormancy type. However, there was a highly significant concentration ofmyrmecochorous plants in the grassland patches immediately neighbouring themounds; this is likely to be due to seeds deposited there by the workers fromthe nest after the elaiosomes had been consumed. The mound vegetation wascomposed mainly of species with long stolons or rhizomes; however, there was nosignificant difference in formation type or length of stolons/rhizomesbetween mounds and the rest of the grassland or among mounds formed by differentant species.     

Absence of the myelin-associated glycoprotein (MAG) and the neural cell adhesion molecule (N-CAM) interferes with the maintenance,but not with the formation of peripheral myelin

We have previously shown that mice deficient in the gene for the myelin-associated glycoprotein (MAG) develop normal myelin in the peripheral nerves, but show axon and myelin degeneration at eight months of age, suggesting that MAG is involved in the maintenance of axon-Schwann cell integrity. The search for molecules that might replace MAG during myelination revealed an overexpression of the neural cell adhesion molecule (N-CAM) at those aspects where MAG is detectable in wild type mice. To test whether N-CAM might compensate for MAG during myelination in MAG-deficient mice, double mutants deficient in both MAG and N-CAM (MAG⁻/N-CAM⁻mice) were generated by cross-breeding the single mutants. Whereas alterations of myelin development were not detectable in either of the single or double mutants, degeneration of myelin and axons occurred approximately 4 weeks earlier in MAG⁻/N-CAM⁻than in MAG⁻mutants. Furthermore, at 8 weeks of age, single fiber preparation and electron microscopy revealed that the number of profiles indicative of degeneration was substantially increased in MAG⁻/N-CAM⁻mutants when compared to MAG⁻mice. These data suggest that in MAG-deficient mice N-CAM does not compensate for MAG in myelin formation but partially substitutes for it in the maintenance of axon-myelin integrity. Received: 20 May 1996 / Accepted: 19 July 1996