Diversity and decay ability of basidiomycetes isolated from lodgepole pines killed by the mountain pine beetle

When lodgepole pines (Pinus contorta Douglas ex Louden var. latifolia Engelm. ex S. Watson) that are killed by the mountain pine beetle (Dendroctonus ponderosae) and its fungal associates are not harvested, fungal decay can affect wood and fibre properties. Ophiostomatoids stain sapwood but do not affect the structural properties of wood. In contrast, white or brown decay basidiomycetes degrade wood. We isolated both staining and decay fungi from 300 lodgepole pine trees killed by mountain pine beetle at green, red, and grey stages at 10 sites across British Columbia. We retained 224 basidiomycete isolates that we classified into 34 species using morphological and physiological characteristics and rDNA large subunit sequences. The number of basidiomycete species varied from 4 to 14 species per site. We assessed the ability of these fungi to degrade both pine sapwood and heartwood using the soil jar decay test. The highest wood mass losses for both sapwood and heartwood were measured for the brown rot species Fomitopsis pinicola and the white rot Metulodontia and Ganoderma species. The sap rot species Trichaptum abietinum was more damaging for sapwood than for heartwood. A number of species caused more than 50% wood mass losses after 12 weeks at room temperature, suggesting that beetle-killed trees can rapidly lose market value due to degradation of wood structural components.     

Sapwood and heartwood affect differentially bacterial and fungal community structure and successional dynamics during Quercus petraea decomposition

In forests, bacteria and fungi are key players in wood degradation. Still, studies focusing on bacterial and fungal successions during the decomposition process depending on the wood types (i.e. sapwood and heartwood) remain scarce. This study aimed to understand the effect of wood type on the dynamics of microbial ecological guilds in wood decomposition. Using Illumina metabarcoding, bacterial and fungal communities were monitored every 3 months for 3 years from Quercus petraea wood discs placed on forest soil. Wood density and microbial enzymes involved in biopolymer degradation were measured. We observed rapid changes in the bacterial and fungal communities and microbial ecological guilds associated with wood decomposition throughout the experiment. Bacterial and fungal succession dynamics were very contrasted between sapwood and heartwood. The initial microbial communities were quickly replaced by new bacterial and fungal assemblages in the sapwood. Conversely, some initial functional guilds (i.e. endophytes and yeasts) persisted all along the experiment in heartwood and finally became dominant, possibly limiting the development of saprotrophic fungi. Our data also suggested a significant role of bacteria in nitrogen cycle during wood decomposition.     

Concentration gradients of free sterols,steryl esters and lipid phosphorus in the trunkwood of Scot's pine (Pinus sylvestris L.)

The amounts of free sterols, steryl esters and lipid phosphorus were determined in the sapwood and heartwood of mature, and in the outer and inner sapwood of young Pinus sylvestris trees. In the mature trees (up to 70 years old) the heartwood contains significantly higher amounts of free sterols than the sapwood. No radial gradient can be demonstrated in the amounts of steryl esters. Lipids extracted from the sapwood contain higher amounts of phosphorus than those from the heartwood. Stems of young Pinus sylvestris trees (up to 13 years old) show in the inner sapwood higher amounts of both free sterols and steryl esters than the peripheral younger wood zone. The inner sapwood of the young stems shows slightly higher amounts of lipid phosphorus than the outer sapwood. The results indicate that Pinus sylvestris accumulates both free sterols and steryl esters in the stems at a very early stage of the life cycle. Sterol accumulation in the innermost parts of the stems seems not to depend on heartwood formation.     

Is oxygen involved in beech (<Emphasis Type="Italic">Fagus sylvatica</Emphasis>) red heartwood formation?

European beech (Fagus sylvatica) facultatively develops red heartwood, which decreases the value of its timber and is difficult to predict in standing trees. According to current theory, the absence of oxygen prevents discolouration in the wood of uninjured trees, and red heartwood forms when oxygen enters the stem through injuries. This theory requires that oxygen concentrations in uncoloured wood are generally very low, and that oxygen can diffuse several metres in the centre of a stem, bypassing the respiring sapwood. Oxygen concentrations measured at different depth in stems with and without red heartwood varied strongly and were generally depleted relative to the air, but rarely close to 0. Concentrations in red heartwood were somewhat, though not significantly higher than in the inner wood of trees without red heartwood. The colour of wood exposed to different oxygen concentrations changed strongly at higher concentrations, but concentrations in standing stems are generally high enough for discolouration. Model calculations suggested that only massive injuries that kill most sapwood at an entry point would allow high amounts of oxygen to penetrate to the core, in which case it may diffuse several metres in the axial direction without being consumed by respiring sapwood. However, given the relatively high diffusion in axial direction, oxygen should spread within a few days, not several years as the development of red heartwood appears to take. These measurements and calculations suggested that, while oxygen is required for beech red heartwood discoloration, it is not the only factor involved but could act by affecting the activity of micro-organisms.     

Fungal wood decomposer activities influence community structures of myxomycetes and bryophytes on coarse woody debris

Dead wood is an important habitat for forest organisms, and wood decay fungi are the principal agents determining the dead wood properties that influence the communities of organisms inhabiting dead wood. In this study, we investigated the effects of wood decomposer fungi on the communities of myxomycetes and bryophytes inhabiting decayed logs. On 196 pine logs, 72 species of fungi, 34 species and seven varieties of myxomycetes, and 16 species of bryophytes were identified. Although white rot was the dominant decay type in sapwood and heartwood, brown and soft rots were also prevalent, particularly in sapwood. Moreover, white rot and soft rot were positively and brown rot negatively correlated with wood pH. Ordination analyses clearly showed a succession of cryptogam species during log decomposition and showed significant correlations of communities with the pH, water content, and decay type of wood. These analyses indicate that fungal wood decomposer activities strongly influence the cryptogam communities on dead wood.     

Spatial Patterns in Hyphal Growth and Substrate Exploitation within Norway Spruce Stems Colonized by the Pathogenic White-Rot Fungus Heterobasidion parviporum

In Norway spruce, a fungistatic reaction zone with a high pH and enrichment of phenolics is formed in the sapwood facing heartwood colonized by the white-rot fungus Heterobasidion parviporum. Fungal penetration of the reaction zone eventually results in expansion of this xylem defense. To obtain information about mechanisms operating upon heartwood and reaction zone colonization by the pathogen, hyphal growth and wood degradation were investigated using real-time PCR, microscopy, and comparative wood density analysis of naturally colonized trees with extensive stem decay. The hyphae associated with delignified wood at stump level were devoid of any extracellular matrix, whereas incipient decay at the top of decay columns was characterized by a carbohydrate-rich hyphal sheath attaching hyphae to tracheid walls. The amount of pathogen DNA peaked in aniline wood, a narrow darkened tissue at the colony border apparently representing a compromised region of the reaction zone. Vigorous production of pathogen conidiophores occurred in this region. Colonization of aniline wood was characterized by hyphal growth within polyphenolic lumen deposits in tracheids and rays, and the hyphae were fully encased in a carbohydrate-rich extracellular matrix. Together, these data indicate that the interaction of the fungus with the reaction zone involves a local concentration of fungal biomass that forms an efficient translocation channel for nutrients. Finally, the enhanced production of the hyphal sheath may be instrumental in lateral expansion of the decay column beyond the reaction zone boundary.To grow to great heights, trees continually replace their water- and nutrient-conducting elements. Older elements, such as the heartwood that is formed in many trees, gradually become nonconductive. In contrast to the living sapwood, heartwood lacks active defense mechanisms against microbes. However, lignin, the polymer coating cell wall polysaccharides, is highly resistant to microbial degradation. In fact, white-rot fungi, besides having evolved the ability to tolerate or detoxify the secondary metabolites accumulating in heartwood, are the only organisms capable of efficiently degrading lignin. Following establishment in the heartwood of living trees, the colonies of pathogenic white-rot fungi expand and eventually also threaten the conductive sapwood.The white-rot fungus Heterobasidion annosum sensu lato, composed of three species with overlapping geographic distributions and host ranges in Europe (23), is the most important pathogen of Norway spruce (Picea abies L. Karst) in boreal forests. Primary infection of Norway spruce stands by H. annosum sensu lato takes place through fresh thinning stumps or wounds on roots and at the base of the stem. Basidiospores landing on these entrance points give rise to mycelia which colonize the root systems, and eventually the fungus spreads into the stem heartwood. At sites infested with Heterobasidion parviporum, a species primarily restricted to Norway spruce, roots of saplings can become infected by the fungus after around 10 years of growth (25). Stem colonization usually initiates only after the heartwood has started to develop, which in Norway spruce takes place in trees 25 to 40 years old (17). Due to relatively rapid axial spread within heartwood, the decay column caused by H. annosum sensu lato often is up to 10 m high in the stems of mature Norway spruce trees.In response to sapwood challenge by an expanding heartwood-based colony of H. annosum sensu lato, Norway spruce forms a so-called reaction zone (RZ) in the border area between healthy sapwood and colonized heartwood. This xylem defense is characterized by high pH due to increased carbonate content and enrichment of phenolic compounds, particularly lignans, some of which have shown antifungal properties in bioassays (14, 30, 31). Although several wood decay fungi are able to eventually penetrate the RZ regions formed in trees, the strategies employed by fungi to breach these unique defense barriers are poorly understood (24). The purpose of this study was to obtain information about the mechanisms operating in heartwood colonization and expansion of the decay column via penetration of the RZ. To do this, we examined spatial growth of H. parviporum and the associated substrate exploitation patterns within naturally colonized mature stems of Norway spruce.     

Effect of age on the distribution of oil in Eastern redcedar tree segments

Eastern redcedar is widespread in the US and produces significant amount of biomass. Open-grown trees invade abandoned fields and compete with valuable forage species in pastures and rangelands. Value-added product development from redcedar is vital for management of eastern redcedar. Cedarwood oil is a valuable component which can be used for further value-added product development. This study examined the effect of age on the distribution of oil in redcedar tree segments. Trunks of eastern redcedar (Juniperus virginiana L.) trees at different stages of growth (26-63 years old) were divided into three sections (top, center and lower). Each section was fractionated separately into bark, heartwood and sapwood segments. Heartwood and sapwood samples from each tree section were analyzed for oil content and composition. A hydrodistillation method was used for oil extraction. Volatile components of tree segments were examined by using a Gas Chromatograph-headspace analysis technique. The heartwood of eastern redcedar contained significantly higher oil than sapwood. Older trees had more oil in the heartwood than younger trees. Both redcedar bark and leaves contained significantly lower oil content than the cedarwood. There were also significant differences in the oil composition of bark, leaves and wood fractions. Cedarwood oil extraction may benefit from prior separation of tree segments prior to oil extraction. However, the economic feasibility of separation prior to an extraction process needs to be further studied. Required extra capital investment and operating costs need to be examined, as well as whether sapwood is worth processing.     

The GSTome Reflects the Chemical Environment of White-Rot Fungi

White-rot fungi possess the unique ability to degrade and mineralize all the different components of wood. In other respects, wood durability, among other factors, is due to the presence of extractives that are potential antimicrobial molecules. To cope with these molecules, wood decay fungi have developed a complex detoxification network including glutathione transferases (GST). The interactions between GSTs from two white-rot fungi, Trametes versicolor and Phanerochaete chrysosporium, and an environmental library of wood extracts have been studied. The results demonstrate that the specificity of these interactions is closely related to the chemical composition of the extracts in accordance with the tree species and their localization inside the wood (sapwood vs heartwood vs knotwood). These data suggest that the fungal GSTome could reflect the chemical environment encountered by these fungi during wood degradation and could be a way to study their adaptation to their way of life.     

Xylem water content and wood density in spruce and oak trees detected by high-resolution computed tomography

Elucidation of the mechanisms involved in long-distance water transport in trees requires knowledge of the water distribution within the sapwood and heartwood of the stem as well as of the earlywood and latewood of an annual ring. X-ray computed tomography is a powerful tool for measuring density distributions and water contents in the xylem with high spatial resolution. Ten- to 20-year-old spruce (Picea abies L. KARST.) and oak (Quercus robur) trees grown in the field were used throughout the experiments. Stem and branch discs were collected from different tree heights, immediately deep frozen, and used for the tomographic determinations of spatial water distributions. Results are presented for single-tree individuals, demonstrating heartwood and sapwood distribution throughout their entire length as well as the water relations in single annual rings of both types of wood. Tree rings of the sapwood show steep water gradients from latewood to earlywood, whereas those of the heartwood reflect water deficiency in both species. Although only the latest two annual rings of the ringporous species are generally assumed to transport water, we found similar amounts of water and no tyloses in all rings of the oak sapwood, which indicates that at least water storage is important in the whole sapwood.     

Wood decay under the microscope

Many aspects of the interactions between host wood structure and fungal activity can be revealed by high resolution light microscopy, and this technique has provided much of the information discussed here. A wide range of different types of decay can result from permutations of host species, fungal species and conditions within wood. Within this spectrum, three main types are commonly recognised: brown rot, white rot and soft rot. The present review explores parts of the range of variation that each of these encompasses and emphasizes that degradation modes appear to reflect a co-evolutionary adaptation of decay fungi to different wood species or the lignin composition within more primitive and advanced wood cell types. One objective of this review is to provide evidence that the terms brown rot, white rot and soft rot may not be obsolete, but rigid definitions for fungi that are placed into these categories may be less appropriate than thought previously. Detailed knowledge of decomposition processes does not only aid prognosis of decay development in living trees for hazard assessment but also allows the identification of wood decay fungi that can be used for biotechnology processes in the wood industry. In contrast to bacteria or commercial enzymes, hyphae can completely ramify through solid wood. In this review evidence is provided that wood decay fungi can effectively induce permeability changes in gymnospermous heartwood or can be applied to facilitate the identification of tree rings in diffuse porous wood of angiosperms. The specificity of their enzymes and the mild conditions under which degradation proceeds is partly detrimental for trees, but also make wood decay fungi potentially efficient biotechnological tools.     

Cellular level observation of water loss and the refilling of tracheids in the xylem of Cryptomeria japonica during heartwood formation

The mechanism of heartwood formation in Cryptomeria japonica D. Don has long been studied since heartwood formation is a fundamental physiological feature of trees. In this study, the water distribution in the xylem of C. japonica was investigated at the cellular level to reveal the role of water distribution in the xylem during heartwood formation. Samples were taken from different heights of each trunk, in which the phases of heartwood formation differed. These were designated as SIH, which consisted of sapwood, intermediate wood, and heartwood; SI, which consisted of sapwood and intermediate wood but no heartwood; and S-all, which consisted entirely of sapwood. Cryo-scanning electron microscopic observations of the heartwood-formed (SIH) and non-heartwood-formed (SI and S-all) xylem revealed different patterns of water distribution changes in tracheids between the latewood and earlywood. In the latewood, almost all tracheids were filled with water in all areas from the sapwood to the heartwood (98–100% of tracheids had water in their lumina). In the earlywood, however, the water distribution differed between the sapwood (95–99%), intermediate wood (7–12%), and heartwood (4–100%). Many of the tracheids in the xylem, where the sapwood changed to intermediate wood lost water. In the heartwood, some tracheids remained empty, while others were refilled with water. These results suggest that the water distribution changes in individual tracheids are closely related to heartwood formation. Water loss from tracheids may be an important factor inducing heartwood formation in the xylem of C. japonica.     

From desert to rainforest, sapwood width is similar in the widespread conifer Callitris columellaris

The process that transforms conductive sapwood to non-conductive heartwood in trees is poorly understood. Here, we use natural variation in climate to examine the environmental control of sapwood width in a widespread conifer species. We hypothesised that if sapwood width is linked to transpirational load, there would be a positive association between sapwood width, and continental gradients in mean annual rainfall, whereas age-related conversion to heartwood would be revealed from estimates of the age of the inner-most sapwood ring. Using the widespread Australian conifer Callitris columellaris we took cores from trees at 85 sites spanning a range of 168–2,117 mm in mean annual rainfall, and 14–28 °C in mean annual temperature. We found that sapwood width was remarkably similar throughout the species range, being only slightly lower in the tropics than the arid or temperate zone. There was a weak negative relationship between sapwood width and mean annual rainfall, which is in the opposite direction expected from transpirational control of sapwood width. Sapwood growth rings were wider, but there were fewer of them in the tropics than elsewhere, indicating conversion to heartwood occurred earlier here. Together with an earlier finding that tracheid diameter was largest in the tropics, our results show that differences amongst climate zones more strongly influence the hydraulic properties of sapwood than its amount.     

Size- and Age-dependent Variation in the Properties of Sap- and Heartwood in Black Locust (Robinia pseudoacaciaL.)

Dissection and mechanical bending experiments showed that the cross-sectional area and elastic moduli of sap- and heartwood varied within the trunk and branches as a function of the distance from the top of a 43-year-old black locust tree (Robinia pseudoacaciaL.). Wood in branches less than 1 m from the top of the tree consisted entirely of sapwood; the majority of the wood from more basipetal (and older) parts of the tree was heartwood. The Young's elastic moduli of sap- and heartwood increased towards the base of the trunk, and, on average, the modulus of the sapwood was 35%less than that of the heartwood. Younger, more distal tree limbs, therefore, were more flexible than older portions of the same tree. Simple bending experiments showed that the flexural rigidity of young limbs was governed by the location, physical properties, and the relative quantities of the two types of wood. The rigidity of limbs increased toward the base of the tree, and was dominated by sapwood in young limbs and by heartwood in the oldest parts of the tree. These trends predict that the younger, distal limbs of this tree can more easily deflect and bend in the wind, thereby reducing drag and the total bending moment on the tree trunk, while older limbs and the trunk are sufficiently rigid to support static self-loadings. Further study, however, is required to determine whether the trends reported here apply to all trees of this species and to trees of different species.     

Insights into intraspecific wood density variation and its relationship to growth,height and elevation in a treeline species

• The wood economics spectrum provides a general framework for interspecific trait–trait coordination across wide environmental gradients. Whether global patterns are mirrored within species constitutes a poorly explored subject. In this study, I first determined whether wood density co‐varies together with elevation, tree growth and height at the within‐species level. Second, I determined the variation of wood density in different stem parts (trunk, branch and twigs).
• In situ trunk sapwood, trunk heartwood, branch and twig densities, in addition to stem growth rates and tree height were determined in adult trees of Nothofagus pumilio at four elevations in five locations spanning 18° of latitude. Mixed effects models were fitted to test relationships among variables.
• The variation in wood density reported in this study was narrow (ca. 0.4–0.6 g cm^?3) relative to global density variation (ca. 0.3–1.0 g cm^?3). There was no significant relationship between stem growth rates and wood density. Furthermore, the elevation gradient did not alter the wood density of any stem part. Trunk sapwood density was negatively related to tree height. Twig density was higher than branch and trunk densities. Trunk heartwood density was always significantly higher than sapwood density.
• Negative across‐species trends found in the growth–wood density relationship may not emerge as the aggregate of parallel intraspecific patterns. Actually, trees with contrasting growth rates show similar wood density values. Tree height, which is tightly related to elevation, showed a negative relationship with sapwood density.

     

Radial and vertical variation of wood nutrients in Bornean tropical forest trees

Nitrogen, phosphorus, potassium, calcium, and magnesium concentrations in woody tissue are poorly documented, but are necessary for understanding whole-tree nutrient use and storage. Here, we report how wood macronutrient concentrations vary radially and along the length of a tree for 10 tropical tree species in Sabah, Malaysia. Bark nutrient concentrations were consistently high: 2.9–13.7 times greater than heartwood depending on the nutrient. In contrast, within the wood both the radial (sapwood vs. heartwood) and vertical (trunk bottom vs. trunk middle) variation was modest. Higher concentrations in sapwood relative to heartwood provide empirical support for wood nutrient resorption during sapwood senescence. Dipterocarp species showed resorption rates of 25.3 ± 7.1% (nitrogen), 62.7 ± 11.9% (phosphorus), and 56.2 ± 12.5% (potassium), respectively, while non-dipterocarp species showed no evidence of nutrient resorption in wood. This suggests that while dipterocarps have lower wood nutrient concentrations, this family is able to compensate for this by using wood nutrient resorption as an efficient nutrient conservation mechanism. In contrast to other nutrients, calcium and magnesium tended to accumulate in heartwood. Wood density (WD) showed little vertical variation along the trunk. Across the species (WD range of 0.33 to 0.94 mg/cm³), WD was negatively correlated with wood P and K concentration and positively correlated with wood Ca concentration. As our study showed exceptionally high nutrient concentrations in the bark, debarking and leaving the bark of the harvested trees on site during logging operations could substantially contribute to maintaining nutrients within forest ecosystems.     

A statistical model for the prediction of the number of sapwood rings in Scots pine (Pinus sylvestris L.)

Dendrochronology is a well-established dating method for wooden objects, but due to surface processing of construction timber or natural degradation the dating of historical wood often relies on a prediction of the number of missing rings based on sapwood statistics. Since Scots pine (Pinus sylvestris L.) is one of the most common tree species in north-western Europe, the absence of reliable sapwood statistics and models for the prediction of missing sapwood rings for pine samples is remarkable. We have therefore produced sapwood statistics based on data from 776 pine trees with ages from 15 to 345 years. The material consists of both living trees and historical timber, with varying growth rates, geographic settings, and from different soil types. When the whole material is considered, the average age of the trees is 103 years, and the number of sapwood rings is 54 ± 15 (1 SD), but range from 18 to 129. Trees less than 100-years in age contained 46 ± 11 (1 SD) sapwood rings and had an average tree-ring width (TRW) of 1.76 mm. With increasing age, the average TRW decreased while the number of sapwood rings increased. The average TRW of 101–200-year-old trees is 0.99 mm while the samples contained 63 ± 12 (1 SD) sapwood rings. For trees older than 201 years, the average TRW is 0.64 mm while the number of sapwood rings increased to 85 ± 16 (1 SD). The two most important factors in determining the number of sapwood rings for a given tree when only heartwood statistics are available proved to be (i) the number of heartwood rings and (ii) the average TRW of the heartwood rings. For incomplete samples, we have therefore developed a statistical model based on the sample’s heartwood rings (number and average width) to compute a prediction interval for the total number of rings. The sapwood and heartwood statistics suggest a statistical model for the number of sapwood rings with mean that increase with the number of heartwood rings. Furthermore, the average number of sapwood rings decreases with the mean width of the heartwood rings. However, the predictive power of the mean width is limited when the number of heartwood rings has already been taken into account. Thus, we suggest making predictions for the number of sapwood rings using only the number of heartwood rings. Predictions of the number of sapwood rings based on the statistical model where convincing in the case of the three different datasets that were analysed. The certainty in these predictions was such that the width of the 80% and 95% prediction intervals ranged 28–34 and 45–52 sapwood rings, respectively. Additionally, we demonstrate how make predictions when there is information about the number of remaining sapwood rings in a given sample. To make the sapwood model available, we present a free online R package for fitting our models and an online software dashboard.     

Early soft rot colonization of Scots sapwood pine in above-ground exposure

The early colonization of Scots pine (Pinus sylvestris L.) sapwood exposed above ground (staple bed) was studied. Two different types of exposures were used, one in an open field and the other in a shaded field. Decay type and degree of degradation due to soft rot, and mass and strength loss of wood were correlated. Fungal species in Scots pine sapwood were identified by sequencing, using the fungal nuclear ribosomal DNA (nrDNA) after 24 months.The most abundant decay type found was soft rot, which also agreed with the mass loss (7–8%). Pine sapwood did not differ significantly between the two sites regarding the average mass loss during the time of exposure. The early colonization of wood by soft rot fungi together with mass loss indicates that this fungal type might be more common in above-ground conditions than recognized earlier.     

Heart rot hotel: fungal communities in red-cockaded woodpecker excavations

Tree-cavity excavators such as woodpeckers are ecosystem engineers that have potentially complex but poorly documented associations with wood decay fungi. Fungi facilitate cavity excavation by preparing and modifying excavation sites for cavity excavators. Associations between fungi and endangered red-cockaded woodpeckers (RCWs) are particularly interesting because these are the only birds that specialize in excavating into the heartwood of living pines, a process that takes years to complete. Using molecular methods, we examined fungal communities in complete and incomplete RCW excavations, and non-cavity control trees. In addition to finding a high diversity of fungi, we found three groupings of fungal communities corresponding to the three groups of trees sampled. We show that trees selected for cavity excavation by RCWs are infected by distinct fungal communities, and propose two hypotheses to explain this outcome: the bird facilitation hypothesis and the tree selection hypothesis.     

Secondary metabolites and nutrients explain fungal community composition in aspen wood

Fungi are the main decomposers of litter and wood, driving carbon and nutrient cycles. Despite a large number of studies, fungal community composition is remarkably difficult to predict. In the present study, we explore the importance of secondary metabolites and nutrient content in wood and bark as determinants of fungal community composition. We used aspen (Populus tremula) logs of similar size, from one location, and measured concentrations of carbon, nitrogen and secondary metabolites in bark and wood sampled shortly after felling. Fungal DNA was extracted from logs directly after felling and after two seasons of decomposition, and the fungal communities were assessed using DNA-metabarcoding. Concentrations of metabolites varied considerably between individual trees, and we also observed significant differences within single trees. Plant metabolites and nitrogen concentrations significantly affected fungal community composition. For the overall fungal communities and for wood saprotrophic fungi, the explanatory power of wood and bark metabolites was highest in logs decomposed over two seasons. In recently felled trees however, concentration of metabolites had a stronger effect on plant pathogens and endophytes. We conclude that secondary metabolites represent an overlooked, but important niche dimension for fungal communities in both functional sapwood and dead wood.     

Development of heartwood in response to water stress for radiata pine in Southern New South Wales, Australia

Heartwood development and other functional changes in stem conductance in response to water stress in radiata pine were investigated using two contrasting climatic areas (high-altitude sub-alpine vs. warm–dry inland) of the Hume region of New South Wales, Australia. The study included mature (34.5–36.5 years old) and young stands (10–11 years old) measured under normal climate and during an extreme drought. The effect of water stress on heartwood development was examined using sapwood percentage, sapwood saturation, development of dry sapwood and evidence of cavitation in sapwood. Trees at the warm–dry site developed heartwood at faster rates than on the high-altitude site. At breast height, the mature stands of the warm–dry site had 8–14 % less sapwood. Extensive cavitation towards the sapwood/heartwood boundary occurred in some of the mature and young stands on the warm–dry site. We postulated that in water-limiting environments, cavitation of the inner sapwood precedes heartwood formation and is an adaptation mechanism that regulates stem conductance capacity and thus water use in the tree. The drought of 2006 led to decreases in moisture associated with cavitation not previously reported for radiata pine and demonstrated the drought hardiness of the species. In the warm–dry site, breast-height sapwood saturation dropped to 58 and 82 % for suppressed and average-sized trees in a mature unthinned stand; and 75–78 % for two young stands. These saturation levels, however, only imply average values as some cells cavitated whilst others were fully saturated. Cavitation occurred in a localized fashion affecting small to large groups of cells.