Development of albian microbialites and microbialite reefs at marginal platform areas of the Vasco-Cantabrian Basin (Soba reef area,Cantabria, N. Spain)

The Middle Albian sequence from the western marginal area of the Vasco-Cantabrian Basin contains calcified microbialites in different marine depositional environments, individually well defined by microstructure, lamina characteristics and mode of formation. Microbialites may form the primary framework of reefs, which occur as composite stacks in mid to lower slope environments or as isolated bodies in small intraplatform basins. In most areas microbialite reef growth was initiated below the photic zone. Stratiform intercalations of microbialites and composite microbialite/foraminifer oncoids are restricted to well bedded carbonate platform deposits (Urgonian). Three basis types of microbialites are recognized:

Mineralized microbialites as archives of environmental evolution,Laguna Negra,Catamarca Province,Argentina

Environmental fluctuations are recorded in a variety of sedimentary archives of lacustrine depositional systems. Geochemical signals recovered from bottom sediments in closed‐basin lakes are among the most sensitive paleoenvironmental indicators and are commonly used in reconstructing lake evolution. Microbialites (i.e., organosedimentary deposits accreted through microbial trapping and binding of detrital sediment or in situ mineral precipitation on organics [Palaios, 2, 1987, 241]), however, have been largely overlooked as paleoenvironmental repositories. Here, we investigate concentrically laminated mineralized microbialites from Laguna Negra, a high‐altitude (4,100 m above sea level) hypersaline, closed‐basin lake in northwestern Argentina, and explore the potential for recovery of environmental signals from these unique sedimentary archives. Spatial heterogeneity in hydrological regime helps define zones inside Laguna Negra, each with their own morphologically distinct microbialite type. Most notably, platey microbialites (in Zone 3A) are precipitated by evaporative concentration processes, while discoidal oncolites (in Zone 3C) are interpreted result from fluid mixing and biologically mediated nucleation. This spatial heterogeneity is reflected in petrographically distinct carbonate fabrics: micritic, botryoidal, and isopachous. Fabric type is interpreted to reflect a combination of physical and biological influences during mineralization, and paired C‐isotope measurement of carbonate and organic matter supports ecological differences as a dominant control on C‐isotopic evolution between zones. Laminae of Laguna Negra microbialites preserve a range of δ¹³C_carb from +5.75‰ to +18.25‰ and δ¹⁸O_carb from ?2.04‰ to +9.28‰. Temporal trends of lower carbon and oxygen isotopic compositions suggest that the influence of CO₂ degassing associated with evaporation has decreased over time. Combined, these results indicate that microbialite archives can provide data that aid in interpretation of both lake paleohydrology and paleoenvironmental change.     

Modern cryptic microbialite/metazoan facies from Lizard Island (Great Barrier Reef,Australia) formation and concepts

Summary From shallow water caves of fringing reefs related to continental islands of the Lizard Island Section thrombolitic micritic microbialites were observed. The microbialites exhibit always a light decreasing facies succession. The succession starts with a coralgal community and ends with light independent microbial biofilms and benthos (coralline sponges). The sessile mineralized benthos community is constructed of crustose foraminifera, serpulids, thecidean brachiopods, bryozoans, and coralline sponges. The observed benthic community is very similar to those one observed in cryptic habitates of Aptian and Albian reefs of northern Spain. For longtime studies of the microbialite formation and growth rates of coralline sponges the specimens were stained in vivo, within their natural habitat with histochemical fluorochromes and nonfluorescent agents. Main results are a very slow growth of the microbialite and associated sponges (50–100 μm/y). Only few calcifying microbes are participators during microbialite formation. Calcifying acidic organic macromolecules are mainly responsible for microbialite formation by cementing detritical material. Fe/Mn-bacterial biofilms are responsible for strong corrosion of the microbialite. Beside the corrosive activity of the Fe/Mn-bacterial biofilms boring sponges (Aka, Cliona) are the main destructors. Geochemically the observed microbialites are composed of mainly high-Mg calcites and exhibit high positive δ¹³C (+3 to +4) values.     

Constraining carbon sources and growth rates of freshwater microbialites in Pavilion Lake using 14C analysis

This study determined the natural abundance isotopic compositions (¹³C, ¹⁴C) of the primary carbon pools and microbial communities associated with modern freshwater microbialites located in Pavilion Lake, British Columbia, Canada. The Δ¹⁴C of dissolved inorganic carbon (DIC) was constant throughout the water column and consistent with a primarily atmospheric source. Observed depletions in DIC ¹⁴C values compared with atmospheric CO₂ indicated effects due either to DIC residence time and/or inputs of ¹⁴C‐depleted groundwater. Mass balance comparisons of local and regional groundwater indicate that groundwater DIC could contribute a maximum of 9–13% of the DIC. ¹⁴C analysis of microbial phospholipid fatty acids from microbialite communities had Δ¹⁴C values comparable with lake water DIC, demonstrating that lake water DIC was their primary carbon source. Microbialite carbonate was also primarily derived from DIC. However, some depletion in microbialite carbonate ¹⁴C relative to lake water DIC occurred, due either to residence time or mixing with a ¹⁴C‐depleted carbon source. A detrital branch covered with microbialite growth was used to estimate a microbialite growth rate of 0.05 mm year^?1 for the past 1000 years, faster than previous estimates for this system. These results demonstrate that the microbialites are actively growing and that the primary carbon source for both microbial communities and recent carbonate is DIC originating from the atmosphere. While these data cannot conclusively differentiate between abiotic and biotic formation mechanisms, the evidence for minor inputs of groundwater‐derived DIC is consistent with the previously hypothesized biological origin of the Pavilion Lake microbialites.     

Microbialite response to an anthropogenic salinity gradient in Great Salt Lake,Utah

A railroad causeway across Great Salt Lake, Utah (GSL), has restricted water flow since its construction in 1959, resulting in a more saline North Arm (NA; 24%–31% salinity) and a less saline South Arm (SA; 11%–14% salinity). Here, we characterized microbial carbonates collected from the SA and the NA to evaluate the effect of increased salinity on community composition and abundance and to determine whether the communities present in the NA are still actively precipitating carbonate or if they are remnant features from prior to causeway construction. SSU rRNA gene abundances associated with the NA microbialite were three orders of magnitude lower than those associated with the SA microbialite, indicating that the latter community is more productive. SSU rRNA gene sequencing and functional gene microarray analyses indicated that SA and NA microbialite communities are distinct. In particular, abundant sequences affiliated with photoautotrophic taxa including cyanobacteria and diatoms that may drive carbonate precipitation and thus still actively form microbialites were identified in the SA microbialite; sequences affiliated with photoautotrophic taxa were in low abundance in the NA microbialite. SA and NA microbialites comprise smooth prismatic aragonite crystals. However, the SA microbialite also contained micritic aragonite, which can be formed as a result of biological activity. Collectively, these observations suggest that NA microbialites are likely to be remnant features from prior to causeway construction and indicate a strong decrease in the ability of NA microbialite communities to actively precipitate carbonate minerals. Moreover, the results suggest a role for cyanobacteria and diatoms in carbonate precipitation and microbialite formation in the SA of GSL.     

Deep‐water microbialites of the Mesoproterozoic Dismal Lakes Group: microbial growth,lithification, and implications for coniform stromatolites

Offshore facies of the Mesoproterozoic Sulky Formation, Dismal Lakes Group, arctic Canada, preserve microbialites with unusual morphology. These microbialites grew in water depths greater than several tens of meters and correlate with high‐relief conical stromatolites of the more proximal September Lake reef complex. The gross morphology of these microbial facies consists of ridge‐like vertical supports draped by concave‐upward, subhorizontal elements, resulting in tent‐shaped cuspate microbialites with substantial primary void space. Morphological and petrographic analyses suggest a model wherein penecontemporaneous upward growth of ridge elements and development of subhorizontal draping elements initially resulted in a buoyantly supported, unlithified microbial form. Lithification began via precipitation within organic elements during microbialite growth. Mineralization either stabilized or facilitated collapse of initially neutrally buoyant microbialite forms. Microbial structures and breccias were then further stabilized by precipitation of marine herringbone cement. During late‐stage diagenesis, remaining void space was occluded by ferroan dolomite cement. Cuspate microbialites are most similar to those found in offshore facies of Neoarchean carbonate platforms and to unlithified, buoyantly supported microbial mats in modern ice‐covered Antarctic lakes. We suggest that such unusual microbialite morphologies are a product of the interaction between motile and non‐motile communities under nutrient‐limiting conditions, followed by early lithification, which served to preserve the resultant microbial form. The presence of marine herringbone cement, commonly associated with high dissolved inorganic carbon (DIC), low O₂ conditions, also suggests growth in association with reducing environments at or near the seafloor or in conjunction with a geochemical interface. Predominance of coniform stromatolite forms in the Proterozoic—across a variety of depositional environments—may thus reflect a combination of heterogeneous nutrient distribution, potentially driven by variable redox conditions, and an elevated carbonate saturation state, which permits preservation of these unusual microbialite forms.     

Hydrochemistry and microbialites of the alkaline crater lake Alchichica,Mexico

The structure, mineralogy, and accretion processes of the modern and subfossil cyanobacterial microbialites from the alkaline crater lake Alchichica (Puebla, Mexico) were studied, along the lake’s bathymetry and hydrochemistry. The recent lowering of the lake level had exposed microbialitic carbonate mounds and crusts, which emerged up to 2 m above the water surface, while accreting cyanobacterial microbialites were present down to a depth of ~15 m. Morphological and molecular analysis found that the living cyanobacterial mats were composed of diverse filamentous and coccoid cyanobacteria (Nostocales, Chroococcales, Oscillatoriales, and Pleurocapsales). The emerged subfossil microbialites comprised two generations: “white” (domes and crusts composed mainly of hydromagnesite with an admixture of huntite and calcite, ²³⁸U/²³⁰Th age of ~2.8 ka BP), and “brown” (chimneys, columns and laminated crusts composed of aragonite with an admixture of Mg-calcite, ²³⁸U/²³⁰Th age of ~1.1 ka BP). The significant age, structural, mineralogical, and isotopic differences suggest that the two generations were formed in different environmental conditions: the “white” during a dry period, and the “brown” in wet climate associated with high water level and intense inflow of ground water, which lowered the Mg/Ca ratio resulting in formation of aragonite instead of hydromagnesite. The hydromagnesite, replacing the primary aragonite precipitated in the living cyanobacterial biofilm, frequently undergoes silicification, which obliterates both the primary structure of the carbonate and the enclosed remains of cyanobacterial microbiota. This process helps to explain the abundant formation of dolomites and cherts in an allegedly highly alkaline Early Precambrian ocean. Thus, Lake Alchichica represents a modern alkaline environment where biosedimentary structures resembling Precambrian deposits are generated.     

Carbonate fabrics in the modern microbialites of Pavilion Lake: two suites of microfabrics that reflect variation in microbial community morphology,growth habit,and lithification

Modern microbialites in Pavilion Lake, BC, provide an analog for ancient non‐stromatolitic microbialites that formed from in situ mineralization. Because Pavilion microbialites are mineralizing under the influence of microbial communities, they provide insights into how biological processes influence microbialite microfabrics and mesostructures. Hemispherical nodules and micrite–microbial crusts are two mesostructures within Pavilion microbialites that are directly associated with photosynthetic communities. Both filamentous cyanobacteria in hemispherical nodules and branching filamentous green algae in micrite–microbial crusts were associated with calcite precipitation at microbialite surfaces and with characteristic microfabrics in the lithified microbialite. Hemispherical nodules formed at microbialite surfaces when calcite precipitated around filamentous cyanobacteria with a radial growth habit. The radial filament pattern was preserved within the microbialite to varying degrees. Some subsurface nodules contained well‐defined filaments, whereas others contained only dispersed organic inclusions. Variation in filament preservation is interpreted to reflect differences in timing and amount of carbonate precipitation relative to heterotrophic decay, with more defined filaments reflecting greater lithification prior to degradation than more diffuse filaments. Micrite–microbial crusts produce the second suite of microfabrics and form in association with filamentous green algae oriented perpendicular to the microbialite surface. Some crusts include calcified filaments, whereas others contained voids that reflect the filamentous community in shape, size, and distribution. Pavilion microbialites demonstrate that microfabric variation can reflect differences in lithification processes and microbial metabolisms as well as microbial community morphology and organization. Even when the morphology of individual filaments or cells is not well preserved, the microbial growth habit can be captured in mesoscale microbialite structures. These results suggest that when petrographic preservation is extremely good, ancient microbialite growth structures and microfabrics can be interpreted in the context of variation in community organization, community composition, and lithification history. Even in the absence of distinct microbial microfabrics, mesostructures can capture microbial community morphology.     

Prokaryote populations of extant microbialites along a depth gradient in Pavilion Lake,British Columbia,Canada

Pavilion Lake in British Columbia, Canada, is home to modern‐day microbialites that are actively growing at multiple depths within the lake. While microbialite morphology changes with depth and previous isotopic investigations suggested a biological role in the formation of these carbonate structures, little is known about their microbial communities. Microbialite samples acquired through the Pavilion Lake Research Project (PLRP) were first investigated for phototrophic populations using Cyanobacteria‐specific primers and 16S rRNA gene cloning. These data were expounded on by high‐throughput tagged sequencing analyses of the general bacteria population. These molecular analyses show that the microbial communities of Pavilion Lake microbialites are diverse compared to non‐lithifying microbial mats also found in the lake. Phototrophs and heterotrophs were detected, including species from the recently described Chloroacidobacteria genus, a photoheterotroph that has not been previously observed in microbialite systems. Phototrophs were shown as the most influential contributors to community differences above and below 25 meters, and corresponding shifts in heterotrophic populations were observed at this interface as well. The isotopic composition of carbonate also mirrored this shift in community states. Comparisons to previous studies indicated this population shift may be a consequence of changes in lake chemistry at this depth. Microbial community composition did not correlate with changing microbialite morphology with depth, suggesting something other than community changes may be a key to observed variations in microbialite structure.     

Carbonate facies‐specific stable isotope data record climate,hydrology, and microbial communities in Great Salt Lake,UT

Organic and inorganic stable isotopes of lacustrine carbonate sediments are commonly used in reconstructions of ancient terrestrial ecosystems and environments. Microbial activity and local hydrological inputs can alter porewater chemistry (e.g., pH, alkalinity) and isotopic composition (e.g., δ¹⁸O_water, δ¹³C_DIC), which in turn has the potential to impact the stable isotopic compositions recorded and preserved in lithified carbonate. The fingerprint these syngenetic processes have on lacustrine carbonate facies is yet unknown, however, and thus, reconstructions based on stable isotopes may misinterpret diagenetic records as broader climate signals. Here, we characterize geochemical and stable isotopic variability of carbonate minerals, organic matter, and water within one modern lake that has known microbial influences (e.g., microbial mats and microbialite carbonate) and combine these data with the context provided by 16S rRNA amplicon sequencing community profiles. Specifically, we measure oxygen, carbon, and clumped isotopic compositions of carbonate sediments (δ¹⁸O_carb, δ¹³C_carb, ?₄₇), as well as carbon isotopic compositions of bulk organic matter (δ¹³C_org) and dissolved inorganic carbon (DIC; δ¹³C_DIC) of lake and porewater in Great Salt Lake, Utah from five sites and three seasons. We find that facies equivalent to ooid grainstones provide time‐averaged records of lake chemistry that reflect minimal alteration by microbial activity, whereas microbialite, intraclasts, and carbonate mud show greater alteration by local microbial influence and hydrology. Further, we find at least one occurrence of ?₄₇ isotopic disequilibrium likely driven by local microbial metabolism during authigenic carbonate precipitation. The remainder of the carbonate materials (primarily ooids, grain coatings, mud, and intraclasts) yield clumped isotope temperatures (T(?₄₇)), δ¹⁸O_carb, and calculated δ¹⁸O_water in isotopic equilibrium with ambient water and temperature at the time and site of carbonate precipitation. Our findings suggest that it is possible and necessary to leverage diverse carbonate facies across one sedimentary horizon to reconstruct regional hydroclimate and evaporation–precipitation balance, as well as identify microbially mediated carbonate formation.     

Paleoclimatic significance of lacustrine microbialites: A stable isotope case study of two lakes at Torres del Paine, southern Chile

Two Patagonian lakes studied here, Lago Sarmiento and Laguna Amarga, are located within the orographic rain shadow formed to the east of the Southern Patagonian Ice Field in the Andes Range. Major thrombolite colonies are present in Lago Sarmiento, whereas widespread stromatolites occur in Laguna Amarga. Based on the characterization of the hydrologic system of these two lakes, together with an estimation of the isotopic balance and an analysis of the equilibrium conditions between the water and biologically induced carbonates, it is concluded that the microbialites of Lago Sarmiento are better suited as paleotemperature indicators than those of Laguna Amarga. Lago Sarmiento thrombolites contain unique carbonate mineral species in which carbonate precipitation occurs close to isotopic equilibrium and where the variation in water temperature controls fractionation of the stable oxygen isotope.The results indicate that at 1215 cal yr Bp the level of the lake was at 85 m a.s.l with a temperature close to 9.3 °C, was at 82 m a.s.l. at 600 cal yr Bp with a temperature close to 8.5 °C. This coincides with the timing of the Northern Hemisphere Medieval Warming Period. At 183 cal yr Bp the level of the lake was at 80 m a.s.l with a cooler temperature close to 7.7 °C, representing a colder period coinciding with the timing of the Little Ice Age (LIA). An interesting outcome of this study is that it reinforces the idea that the δ¹³C signal in carbonate deposits can be an effective tool in distinguishing between inorganic and biologically induced precipitation.     

Microbially influenced lacustrine carbonates: A comparison of Late Quaternary Lahontan tufa and modern thrombolite from Fayetteville Green Lake,NY

Carbonate microbialites in lakes can serve as valuable indicators of past environments, so long as the biogenicity and depositional setting of the microbialite can be accurately determined. Late Pleistocene to Early Holocene frondose draping tufa deposits from Winnemucca Dry Lake (Nevada, USA), a subbasin of pluvial Lake Lahontan, were examined in outcrop, petrographically, and geochemically to determine whether microbially induced precipitation is a dominant control on deposition. These observations were compared to modern, actively accumulating microbialites from Fayetteville Green Lake (New York, USA) using similar methods. In addition, preserved microbial DNA was extracted from the Lahontan tufa and sequenced to provide a more complete picture of the microbial communities. Tufas are texturally and geochemically similar to modern thrombolitic microbialites from Fayetteville Green Lake, and the stable isotopic composition of organic C, N, inorganic C, and O supports deposition associated with a lacustrine microbial mat environment dominated by photosynthetic processes. DNA extraction and sequencing indicate that photosynthetic microbial builders were present during tufa deposition, primarily Chloroflexi and Proteobacteria with minor abundances of Cyanobacteria and Acidobacteria. Based on the sequencing results, the depositional environment of the tufas can be constrained to the photic zone of the lake, contrasting with some previous interpretations that put tufa formation in deeper waters. Additionally, the presence of a number of mesothermophilic phyla, including Deinococcus–Thermus, indicates that thermal groundwater may have played a role in tufa deposition at sites not previously associated with groundwater influx. The interpretation of frondose tufas as microbially influenced deposits provides new context to interpretations of lake level and past environments in the Lahontan lake basins.     

Genesis of microbialites as contemporaneous framework components of deglacial coral reefs, Tahiti (IODP 310)

Deglacial reefs from Tahiti (IODP 310) feature a co-occurrence of zooxanthellate corals with microbialites that compose up to 80 vol% of the reef framework. The notion that microbialites tend to form in more nutrient-rich environments has previously led to the concept that such encrustations are considerably younger than the coral framework, and that they have formed in deeper storeys of the reef edifice, or that they represent severe disturbances of the reef ecosystem. As indicated by their repetitive interbedding with coralline red algae, the microbialites of this reef succession of Tahiti, however, formed immediately after coral growth under photic conditions. Clearly, the deglacial reef microbialites present in the IODP 310 cores did not follow disturbances such as drowning or suffocation by terrestrial material, and are not “disaster forms”. Given that the corals and the microbialites developed in close spatial proximity, highly elevated nutrient levels caused by fluvial or groundwater transport from the volcanic hinterland are an unlikely cause for the exceptionally voluminous development of microbialites. That voluminous deglacial reef microbialites generally are restricted to volcanic islands, however, implies that moderately, and possibly episodically elevated nutrient levels favored this type of microbialite formation.     

Irradiance Regulation of Photosynthesis and Respiration in Modern Marine Microbialites Built by Benthic Cyanobacteria in a Tropical Lagoon (New Caledonia)

Microbialites are organosedimentary deposits that have built up as a result of the growth and binding of detrital sediment by a benthic microbial community. This study focuses on microbialites built by monospecific populations of cyanobacteria in the south-west lagoon of New Caledonia, where they have been observed down to 20–25 m depth. The aim was to study their photosynthetic and respiratory responses to various light intensities. The Phormidium sp. TK1 microbialite was collected at 19 m depth and the P. crosbyanum (Tilden) microbialite was collected at 0.5 and 13 m depth. Phormidium sp. TK1 showed all the characteristic features of a low-light adapted species. The initial slope of the Photosynthesis versus Irradiance curve for this microbialite was close to the maximum quantum yield indicating an efficient light absorption and utilization at low light. The photosynthesis maximum was located 0.2–0.4 mm below the surface and did not shift with changing light intensity. Respiration rates were low and not enhanced by light; photoinhibition was observed at higher light intensities. In Phormidium crosbyanum (Tilden) microbialites, the photosynthesis maximum shifted downward to lower depths with increasing light, probably as a result of phototactic migration of cyanobacterial filaments, and light-enhanced respiration was observed at light intensities above light saturation. The photosynthetic para- meters measured in P. crosbyanum indicate that P. crosbyanum is capable of photo-acclimation at high light intensities. The gross productivity of the different microbialites was comparable to values measured in cyanobacterial stromatolites observed in other shallow environments. However, the microbialites studied here were characterized by a lower respiration / production ratio which indicates a higher growth efficiency.     

Stable isotope composition of <Emphasis Type="Italic">Chara rudis</Emphasis> incrustation in Lake Jasne,Poland

Stable isotope composition (δ¹³C and δ¹⁸O) was analysed in mineral incrustation of Chara rudis and surrounding waters. This macroalga forms dense and extensive charophyte meadows and may significantly contribute to the calcium carbonate precipitation and deposition of marl lake sediments. The study aimed to find out if charophyte calcium carbonate was precipitated in an isotopic equilibrium with lake water and if the precipitation was related to the environmental conditions. Two apical internodes of 10 individuals of C. rudis were collected monthly between June and late October 2008 at three permanent study sites (1.0 m, 1.5 m and 2.0 m deep) in a small (15.1 ha) and shallow (mean depth: 4.3 m) mid-forest lake with extensively developed charophyte meadows (Lake Jasne, mid-Western Poland). Basic physical–chemical analyses were performed at each study site, and water samples for further laboratory determinations, including stable isotope analyses, were collected from the above searched C. rudis stands and, simultaneously, at three comparative sites in the macrophyte-free pelagial. The difference in δ¹³C between incrustation and water from above C. rudis exceeded 2‰ V-PDB at each site. In the case of δ¹⁸O, it exceeded 2‰ between July and September. Accordingly, it is postulated that calcium carbonate was not precipitated in an isotopic equilibrium with lake water. Incrustation was enriched in heavier carbon isotope, ¹³C, and water was enriched in ¹⁸O. δ¹³C of incrustation and DIC were positively correlated, whereas negative relation was found between δ¹⁸O of incrustation and water. Several dependencies were found with water chemistry above the plants. The content of mineral incrustation in Chara dry weight had negative influence on the δ¹⁸O but not on the δ¹³C. Community depth, structure and PVI had no effect. No significant differences appeared between isotope composition in the pelagic zone and Chara stands.     

Geospatial insights into the controls of microbialite formation at Laguna Negra,Argentina

Microbialites provide a record of the interaction of microorganisms with their environment constituting a record of microbial life and environments through geologic time. Our capacity to interpret this record is limited by an incomplete understanding of the microbial, geochemical, and physical processes that influence microbialite formation and morphogenesis. The modern system Laguna Negra in Catamarca Province, Argentina contains microbialites in a zone of carbonate precipitation associated with physico-chemical gradients and variable microbial community structure, making it an ideal location to study how these processes interact to drive microbialite formation. In this study, we investigated the geospatial relationships between carbonate morphology, geochemistry, and microbial community at the macro- (decimeter) to mega- (meter) scale by combining high-resolution imagery with field observations. We mapped the distribution of carbonate morphologies and allochtonously-derived volcaniclasts and correlated these with sedimentary matrices and geochemical parameters. Our work shows that the macroscale distribution of different carbonate morphologies spatially correlates with microbial mat distributions—a result consistent with previous microscale observations. Specifically, microbialitic carbonate morphologies more commonly occur associated with microbial mats while abiotically derived carbonate morphologies were less commonly associated with microbial mats. Spatial variability in the size and abundance of mineralized structures was also observed, however, the processes controlling this variability remains unclear and likely represent a combination of microbial, geochemical, and physical processes. Likewise, the processes controlling the spatial distribution of microbial mats at Laguna Negra are also unresolved. Our results suggest that in addition to the physical drivers observed in other modern environments, variability in the spatial distribution of microbialites and other carbonate morphologies at the macro- to megascale can be controlled by microbial processes. Overall, this study provides insight into the interpretation of microbialite occurrence and distributions in the geologic record and highlights the utility of geospatial statistics to probe the controls of microbialite formation in other environments.     

Metagenomic and stable isotopic analyses of modern freshwater microbialites in Cuatro Ciénegas, Mexico

Ancient biologically mediated sedimentary carbonate deposits, including stromatolites and other microbialites, provide insight into environmental conditions on early Earth. The primary limitation to interpreting these records is our lack of understanding regarding microbial processes and the preservation of geochemical signatures in contemporary microbialite systems. Using a combination of metagenomic sequencing and isotopic analyses, this study describes the identity, metabolic potential and chemical processes of microbial communities from living microbialites from Cuatro Ciénegas, Mexico. Metagenomic sequencing revealed a diverse, redox-dependent microbial community associated with the microbialites. The microbialite community is distinct from other marine and freshwater microbial communities, and demonstrates extensive environmental adaptation. The microbialite metagenomes contain a large number of genes involved in the production of exopolymeric substances and the formation of biofilms, creating a complex, spatially structured environment. In addition to the spatial complexity of the biofilm, microbial activity is tightly controlled by sensory and regulatory systems, which allow for coordination of autotrophic and heterotrophic processes. Isotopic measurements of the intracrystalline organic matter demonstrate the importance of heterotrophic respiration of photoautotrophic biomass in the precipitation of calcium carbonate. The genomic and stable isotopic data presented here significantly enhance our evolving knowledge of contemporary biomineralization processes, and are directly applicable to studies of ancient microbialites.     

Microbialite concretions in a dolostone crust at the Permian–Triassic boundary of the Xishan section in Jiangsu Province,South China

Carbonate concretions with structures and fossil groups associated with microbialite developed in a dolostone crust at the Permian–Triassic boundary of the Xishan section in Jiangsu Province, South China. These structures include clotted fabrics and laminated carbonate needles, as well as abundant carbonate crystal fans. Fossil groups associated with microbialite include microconchids, small gastropods, and small foraminifers. These fabrics and fossils suggest that the concretions are carbonate microbialite blocks developed in the dolostone crust. On the basis of the analysis of the microfabrics and the fossil groups together with a comparison to modern analogues, we attribute the formation of the micritic patches in the microbialite concretions to the calcification of cyanobacterial mats via carbonate nanoparticles and we attribute the carbonate crystal fans to the direct recrystallization of micritic carbonates. The sparitic patches were interpreted as either the direct recrystallization of micritic carbonates or the precipitation of carbonate spars in the inter-/intra-spaces of metazoan shells together with the recrystallization of these shells. The similarities to modern stromatolites, both in morphology and in internal texture, suggest that the laminated carbonate needles are stromatolite laminae built by filamentous cyanobacteria. The preservation of these microbialite microfabrics indicates that early lithification by carbonate precipitation was widespread and intense following the end-Permian boundary events. The weak development of microbialites as small concretions may be attributed to the deeper water depth and the lower water energy in the Xishan area during the earliest Triassic.     

The Girvanella-like remains from Messinian marine deposits (Sardinia,Italy): Lagerstätten paradigm for microbial biota?

The lower Messinian marine sediments of the Capo San Marco Formation in the Sinis area (Sardinia, Italy) contain extensive carbonate buildups mainly made of microbialites. These microbialites exhibit general thrombolitic fabric and occur in meso-macroscopic scale as dominant cauliflower-like structures, digitations and encrusting rings. All the microbialites are here associated with serpulid tubes and bryozoan colonies. Examination of thin sections from microbialite samples reveal the presence of dense flexuous, not ramified and erect tubular micritic structures, with an external diameter ranging from 30 to 40 μm, all characters being very close to those of the Girvanella-type filaments. Although all microbialites show quite similar structural aspects, only two levels contain clearly visible networks of such filaments. The associated marine biota is diverse (cemented, borers, burrowers) related to the available biotopes (hard substrates, fine grained sediment, cavities…). The general scarcity of microbial remains in Messinian microbialites points out to the problem of taphonomic processes allowing a good preservation of microbial structures. The concept of Lagerstätten could well be extended to the preservation of microscopic organisms in the carbonate material. The discovery of Girvanella-like filaments demonstrates the implication of cyanobacterial organisms in the construction processes of the Messinian thrombolitic buildups. Furthermore, it is the first time that Girvanella-like microbialites are documented from Upper Miocene marine rocks.     

Microbioerosion in Tahitian reefs: a record of environmental change during the last deglacial sea-level rise (IODP 310)

The main motivation for Integrated Ocean Drilling Program Expedition 310 to the Tahitian Archipelago was the assumption that the last deglacial sea‐level rise is precisely recorded in the coral reefs of this far‐field site. The Tahitian deglacial succession typically consists of coral framework subsequently encrusted by coralline algae and microbialites. The high abundance of microbialites is uncommon for shallow‐water coral reefs, and the environmental conditions favouring their development are still poorly understood. Microbioerosion patterns in the three principal framework components (corals, coralline algae, microbialites) are studied with respect to relative light availability during coral growth and subsequent encrustation, in order to constrain the palaeobathymetry and the relative timing of the encrustation. Unexpectedly for a tropical, light‐flooded setting, ichnotaxa typical for the deep‐euphotic to dysphotic zone dominate. The key ichnotaxa for the shallow euphotic zone are scarce in the analysed sample set, and are restricted to the base of the deglacial succession, thus reflecting the deglacial sea‐level rise. At the base of the deglacial reef succession, the ichnocoenoses present in the corals indicate shallower bathymetries than those in the encrusting microbialites. This is in agreement with radiocarbon data that indicate a time gap of more than 600 years between coral death and microbialite formation. At the top of the deglacial reef succession, in contrast, the microbioerosion patterns in the three framework components indicate a uniform palaeobathymetry, and radiocarbon ages imply that encrustation took place shortly after coral demise. An enigma arises from the fact that the ichnocoenoses imply photic conditions that appear very deep for zooxanthellate coral growth. During the deglacial sea‐level rise increased nutrients and fluvial influx may have led to (seasonal?) eutrophication, condensing the photic zonation. This would have exerted stress on the coral ecosystem and played a significant role in initiating microbialite development.