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1.
The Sickle Darter Percina williamsi (Page and Near, 2007) is a species of fish endemic to the upper Tennessee River basin in eastern Tennessee, southwestern Virginia, and western North Carolina. Because of its narrow range and presumed decline in occupied sites over the last half century, it is being proposed for federal listing under the Endangered Species Act. We analyzed the current distribution of the Sickle Darter and temporal trends in its distribution in relation to temporal trends in environmental and habitat covariates for each of the historically occupied sub-basins (upper Clinch, Emory, upper French Broad, Little, Little Pigeon, Middle Fork Holston, North Fork Holston, Powell, South Fork Holston, and Watauga) with multiple linear regression modelling. A total of 154 Sickle Darters were observed at 15 sites throughout the upper Tennessee River Basin. Sickle Darters were observed in the Little River, Emory River, and Middle Fork Holston River sub-basins. A total of 133 unique historical occurrences were used for the spatiotemporal analyses. Sickle Darters have declined in 8 out of 10 historically occupied sub-basins. Our best model for the whole distribution scale (Mallow's Cp = −0.87; Adjusted R2 = .92) suggests that habitat fragmentation due to damming has had adverse effects on Sickle Darter populations across its distribution. Models were very similar for the sub-basin specific models as well. The results from this study highlight the drivers of decline in Sickle Darter distribution and outline the future research needs for this species that should be used to inform future conservation decisions regarding this species.  相似文献   

2.
Background and Aims Quercus petraea colonized Irelandafter the last glaciation from refugia on mainland Europe. Deforestation,however, beginning in Neolithic times, has resulted in small,scattered forest fragments, now covering less than 12 000 ha. • Methods Plastid (three fragments) and microsatellitevariation (13 loci) were characterized in seven Irish populationssampled along a north–south gradient. Using Bayesian approachesand Wright’s F-statistics, the effects of colonizationand fragmentation on the genetic structure and mating patternsof extant oak populations were investigated. • Key Results All populations possessed cytotypes commonto the Iberian Peninsula. Despite the distance from the refugialcore and the extensive deforestation in Ireland, nuclear geneticvariation was high and comparable to mainland Europe. Low populationdifferentiation was observed within Ireland and populationsshowed no evidence for isolation by distance. As expected ofa marker with an effective population size of one-quarter relativeto the nuclear genome, plastid variation indicated higher differentiation.Individual inbreeding coefficients indicated high levels ofoutcrossing. • Conclusions Consistent with a large effective populationsize in the historical migrant gene pool and/or with high geneflow among populations, high within-population diversity andlow population differentiation was observed within Ireland.It is proposed that native Q. petraea populations in Irelandshare a common phylogeographic history and that the presentgenetic structure does not reflect founder effects.  相似文献   

3.
Species in the genus Epioblasma have specialized life historyrequirements and represent the most endangered genus of freshwatermussels (Unionidae) in the world. A genetic characterizationof extant populations of the oyster mussel E. capsaeformis andtan riffleshell E. florentina walkeri sensu late was conductedto assess taxonomic validity and to resolve conservation issuesfor recovery planning. These mussel species exhibit pronouncedphenotypic variation, but were difficult to characterize phylogeneticallyusing DNA sequences. Monophyletic lineages, congruent with phenotypicvariation among species, were obtained only after extensiveanalysis of combined mitochondrial (1396 bp of 16S, cytochrome-b,and ND1) and nuclear (515 bp of ITS-1) DNA sequences. Incontrast, analysis of variation at 10 hypervariable DNA microsatelliteloci showed moderately to highly diverged populations basedon FST and RST values, which ranged from 0.12 to 0.39 and 0.15to 0.71, respectively. Quantitative variation between specieswas observed in fish-host specificity, with transformation successof glochidia of E. capsaeformis significantly greater (P<0.05)on greenside darter Etheostoma blennioides, and that of E. f.walkeri significantly greater (P<0.05) on fantail darterEtheostoma flabellare. Lengths of glochidia differed significantly(P<0.001) among species and populations, with mean sizesranging from 241 to 272 µm. The texture and colourof the mantle-pad of E. capsaeformis sensu stricto is smoothand bluish-white, whereas that of E. f. walkeri is pustuledand brown, with tan mottling. Based on extensive molecular,morphological and life history data, the population of E. capsaeformisfrom the Duck River, Tennessee, USA is proposed as a separatespecies, and the population of E. f. walkeri from Indian Creek,upper Clinch River, Virginia, USA is proposed as a distinctsubspecies. (Received 23 February 2005; accepted 16 January 2006)  相似文献   

4.
We determined the genetic diversity of geographic populations from three spawning grounds (Nyang River, Lhasa River, Shetongmon Reach of Yarlung Zangbo River) of Glyptosternum maculatum with amplified fragment length polymorphism (AFLP) markers. Five primer combinations detected 332 products, 51 of them (15.4%) were polymorphic in at least one population. The Shetongmon population was found to be the richest in genetic diversity as was indicated by the percentage of polymorphic loci and heterozygosity, followed by the Nyang population and the Lhasa population. The pair-wise genetic distance between populations were all very close, ranging from 0.0015 to 0.0042 with an average of 0.0024. The genetic distance was not proportional to the geographic distance. The analysis of molecular variance demonstrated that all variation occurred within populations. The average estimated fixation index (F st) of three populations across all polymorphic loci was −0.0184, indicating the absence of genetic differences among the three sampled populations. The differentiation among populations was not significant, and population structure was weak. Our observations will help identify the genetic relationship among populations as the first approach to understand the genetic diversity of Glyptosternum maculatum.  相似文献   

5.
Crepidula fornicata(Linné) was introduced into Britainand Europe with oysters early in this century. The source populationswere probably from Long Island Sound of the Northwestern Atlantic,U.S.A. In order to determine the genetic similarity of the introducedand native populations, starch-gel electrophoresis was performedon 6 native populations from Maine to Long Island Sound. Theseresults were compared with those for one population from Portsmouth,England. The degree of similarity among New England sites was not relatedto the geographical distance between sites. There were no clinesin gene frequencies. The year-to-year variation at one sitewas often larger than variation between sites. Ail Nei's D valueswere very small, compared with those between species, rangingfrom 0.003 to 0.016 for New England samples. The English populationhad Nei's D values of 0.002 to 0.012 from the New England samples,and hence was not divergent. At no locus was the Portsmouthpopulation significantly different in gene frequencies fromall the new England samples. Genetic distances between speciesof Crepidula are usually in the range of 1.0–2.0. Thedifferences between New England sites can be attributed to samplingerror or to local variation in gene frequency caused by variationin source of recruitment. The species is unified by its planktoniclarvae and a fairly uniform habitat within New England. Heterozygosity and other measures of genetic variation werelower for the Portsmouth population than for any of the NewEngland samples. The absence of some alleles in the Portsmouthpopulation could be due in part to sampling error associatedwith small sample size or the loss of some rare alleles fromthe population. (Received 8 March 1984;  相似文献   

6.
The incidence of abnormally developing embryos in brood pouchesof females was studied in five populations of Littorina saxatilisliving under different salinity conditions. The proportion ofabnormals decreased during embryonic development. Age of femaleand infection with the ciliate Protophrya ovi-cola had no effecton the frequency of abnormals. The proportion of abnormal eggs(PAE) increased at the end of the reproductive season; a similartrend was found for the proportion of abnormal veligers (PAV)although it was not always significant. The proportion of abnormaljuveniles (PAJ) showed no seasonality. The increase of PAE coincidedwith decrease of water temperature in September. Environmentalsalinity was significantly correlated with frequency of abnormalsin L. saxatilis populations: the highest values of PAV and PAJwere observed in estuarine population (salinity range 5–8%),intermediate in populations living under conditions of 10–20%osalinityand lowest in control populations (23–24%). Itis suggested that critical salinity (sensu Khle-bovich, 1974)(approximately 8–10%) may also be a crucial point forstability of embryonic development in the White Sea populationsof L. saxatilis. (Received 28 June 1994; accepted 28 November 1994)  相似文献   

7.
We report on multiple patterns of differentiation and connectivity in the fanshell pearlymussel (Cyprogenia stegaria), based on different markers. Knowledge of genetic variation and genetic connectivity among remaining populations of this federally endangered species is needed to initiate implementation of the species recovery plan. We collected tissue samples from 96 specimens from the Green, Rolling Fork, and Licking Rivers, tributaries to the Ohio River, and the Clinch River, a tributary to the Tennessee River, providing broad coverage of the current distributional range of the species. Results from 7 nuclear DNA microsatellite markers suggested minimal population-level differentiation, whereas a mitochondrial DNA (mtDNA) marker (ND1) exhibited significant differentiation between C. stegaria in the Clinch River and the Ohio River populations. The ND1 data also confirm the existence of 2 distinct mtDNA lineages in the genus that transcends species boundaries. Further analyses suggest that the disproportionally strong signal from 2 very divergent ND1 lineages possibly masks finer-grained structure in the Ohio River population, based on one of the mtDNA lineages only. We recommend further sampling to confirm the absence of one lineage from the upper Clinch River drainage and suggest that provisional management guidelines should limit reciprocal exchanges among C. stegaria populations from the Clinch River and those in the Ohio River system.  相似文献   

8.
The Bliss Rapids Snail (Taylorconcha serpenticola) is a threatenedspecies that ranges along a short reach of the middle SnakeRiver in southern Idaho. Additional Taylorconcha populationsof uncertain taxonomic status have recently been discoveredin other portions of the Snake River basin (Owyhee River, lowerSnake River). We investigated the phylogenetic relationshipsand population structure of these snails, together with twooutgroups, using cytochrome c oxidase subunit I (COI) of mitochondrialDNA and the first internal transcribed spacer region betweenthe 18S and 5.8S ribosomal DNA. These data show no sharing ofhaplotypes or genotypes among T. serpenticola and the Owyhee-LowerSnake populations, with both depicted as monophyletic unitswithin the Taylorconcha clade. Both of these datasets and morphologicalevidence suggest that the Owyhee-Lower Snake populations area distinct species, which we describe herein (T. insperata newspecies). Application of an available COI molecular clock suggeststhat Taylorconcha arose in the late Miocene, when ancestralSnake River drainage was impounded in an extensive lacustrinesystem (‘Lake Idaho’) in western Idaho. The shallowpopulation structuring of T. insperata suggests that the lowerSnake River was only recently colonized subsequent to incisionof Hells Canyon, draining of Lake Idaho, and development ofa through-going river in the late Neogene. The absence of significantgenetic structure in T. serpenticola, which is attributed tothe unstable course and flow regime of the middle Snake Riverduring the Quaternary, suggests that this species can be treatedas a single management unit. (Received 14 July 2005; accepted 23 September 2005)  相似文献   

9.
Herrera  Javier 《Annals of botany》2001,88(6):1027-1037
Size differences in organs involved to varying degrees in pollenexchange (standard and keel petals, calyx, pedicel and inflorescencestem diameter), together with correlations among these traits,were investigated at both the intraspecific and interspecificlevels in populations of 15 southern Spanish species of thepapilionoid legume tribe Genisteae. Characteristics less relatedto pollination (e.g. pedicel length and stem diameter) wereroughly twice as variable between individuals as petal or calyxdimensions. The coefficients of variation were in the range16–19%vs. 7–10%, respectively. Standard and keelpetal size varied in parallel, not only in conspecific individualsbut also across species and genera, suggesting a tight developmentalrelationship between these organs and a low potential for evolutionarymodification. The remaining characteristics covaried in differentways within and between species and thus appeared much lessmutually constrained (particularly so for calyx size). Multivariateanalyses of variance revealed significant population divergencein five out of six species. Overall, 28% of all variation inflower size occurred among populations and 72% within populations,but the proportion of variance accounted for by population membershipvaried extensively across species (from 1 to 64%) and was highestin two selfing annuals (Lupinus). Outcrossing perennials mayshow either high (Stauracanthus, Genista) or low (Cytisus) populationdifferentiation. In addition to contributing to the increasingamount of data on quantitative floral variation in plants, resultsof this study may help understand how pleiotropic effects limitthe evolutionary modification of some flower traits more thanothers in diverse plant groups. Copyright 2001 Annals of BotanyCompany Calyx, corolla, Genisteae, legumes, shrub, population divergence, Mediterranean, pollination, individual variation  相似文献   

10.
我国草鱼野生群体D-Loop序列遗传变异分析   总被引:3,自引:0,他引:3  
利用线粒体DNA的D-Loop区序列, 对来自长江水系(邗江、吴江、九江、石首、木洞和万州)、珠江水系(肇庆)和黑龙江水系(嫩江)的8个草鱼野生群体开展了遗传变异分析。在424尾鱼中检测到34个变异位点, 34个单倍型, 单倍型多样性介于0.4740.708。群体间Kimura双参数遗传距离介于0.00200.0049。长江下游3个群体间遗传距离最近, 遗传分化不显著(P0.05); 肇庆群体与长江上游3个群体遗传距离较近, 与九江群体遗传分化不显著(P0.05); 嫩江群体与长江上游2个群体遗传距离较近, 与万州群体遗传分化不显著(P0.05)。遗传距离与地理距离存在极显著正相关(R=0.61, P0.01)。分子方差分析显示, 不同流域间遗传变异占总变异26.24%, 差异极显著(P0.01)。34个单倍型分为2个分支, 分化极显著(FST=0.644, P0.01), 推测分化时间为第四纪更新世纪晚期。    相似文献   

11.
Bluemask darters (Etheostoma akatulo) were sampled from the four drainages where extant populations of this narrowly endemic freshwater fish are known to exist. Population genetic diversity and structure were assessed at 10 microsatellite loci. All populations exhibited low levels of genetic variation, with expected heterozygosity ranging from 0.2 to 0.35. Significant population subdivision was found among most tributaries, and genetic divergence was strongly correlated with geographic distance. Bayesian population assignment and pairwise population differentiation measures both identified a lack of differentiation between E. akatulo populations inhabiting Cane Creek and the Caney Fork. This observation reduced the number of distinct breeding populations of this species to three. We also used approximate Bayesian computation to compare three models of demographic history in this species. A constant population size model was favored over models that included historic or recent population reductions. Our results suggest that impoundment of the Caney Fork and its tributaries, by completion of Great Falls Dam in 1916, was not responsible for the reduced genetic diversity in the sampled populations. Given the low levels of genetic diversity within populations and the limited geographic distribution, future conservation efforts should seek to maximize available habitat while simultaneously limiting the influences of anthropogenic stressors in the system.  相似文献   

12.
The incidence of abnormally developed embryos within the brood-pouchof female L. saxatilis was very variable, ranging from 0–100%of embryos being abnormal. A minor part of the total variationwas attributed to between-shore variation, while 82% reflectedwithin sample differences between females. Possible factorsresponsible for the variation in embryo abnormality shown bythis and other investigations, are discussed and it is concludedthat genetic rather than non-genetic factors are important. (Received 8 November 1983;  相似文献   

13.
The habitat, diet, some reproductive and mortality factors forseveral shallow-water species of the boreal turrid genus Oenopotafrom the Puget Sound region were determined. All fed exclusivelyon tubicolous polychaetes. Oenopota fidicula was a dietary andhabitat generalise Oenopota elegans eats Schistocomus hiltoniand lives in areas of shell fragments. Oenopota excunata eatsTharyx multifilis and is a habitat generalist. Oenopota tabulataappears to be a dietary generalist, but lives only on or nearrocks. The widely-distributed species, O. levidensis, eats spionidpolychaetes, primarily Polydora species, or Owenia fusiformis,and is a habitat generalist. Feeding frequencies are low asare population densities; although O. levidensis sometimes exceeds15 animals m–2. Crabs are major predators upon turridsin some areas, but mortality causes are generally obscure. Spawningwas observed in four species, but only O. elegans and O. levidensishad viable larvae. Development takes 13–15 weeks, 6–7weeks in a capsule and 6–7 weeks as planktonic veligers.There are no nurse eggs. Settling was not observed. *Present mailing address: Bamfield Marine Station Bamfield,B.C. VOR 1B0 CANADA (Received 30 May 1982;  相似文献   

14.
Short-day and Low-temperature Induction in Lolium   总被引:4,自引:0,他引:4  
COOPER  J. P. 《Annals of botany》1960,24(2):232-246
The requirements for floral induction of several outbreedingpopulations of Lolium perenne, L. multiflorum, and L. rigidumhave been studied. Floral induction can be brought about byeither low temperature (0–30° C.) or short day (8hr.) independently, but short day is ineffective at low temperatures. The exact inductive requirement varies with the population.The summerannual Westerwolds ryegrass needs neither cold norshort day, the winter-annual Wimmera ryegrass shows a quantitativeresponse, while the perennial varieties from north-west Europehave an obligatory requirement for either cold or short daybefore floral induction. This relation between the annual orperennial habit and the inductive requirement was confirmedin a number of Mediterranean collections of L. perenne and L.rigidum. Considerable genetic variation in inductive requirement couldbe detected within each outbreeding population, and rapid responseto selection proved possible in Wimmera, Irish, and Kent ryegrass.  相似文献   

15.
Inadequate understanding of the phylogeography, taxonomy, and historical distribution of two critically imperiled freshwater mussels, Cumberland bean, Villosa trabalis, and purple bean, Villosa perpurpurea, has hindered management and recovery actions related to population restoration within their extant ranges. For more than 100 years, the purple-to-pink nacre of V. perpurpurea and white nacre of V. trabalis have been the only defining phenotypic characteristics used to distinguish each species. Genetic samples were analyzed from 140 individuals collected from 10 streams located in Virginia, Tennessee, and Kentucky, representing all known extant populations of each species. A 784-bp section of the mitochondrial DNA ND1 region was sequenced to assess the phylogeography and taxonomic validity of these taxa. Results of our phylogenetic analyses showed 100 % Bayesian posterior support for two distinct clades, one occurring in the Cumberland River basin and the other in the Tennessee River basin, separated by a mean genetic distance of 4 %. Mean genetic distances between haplotypes within each clade was <1 %. Among individuals from the Cumberland River basin, the nacre of shells was white to bluish-white, but in the Tennessee River basin, nacre graded from white to pink to dark purple; thus, nacre color is a variable and inconsistent character in nominal V. trabalis and V. perpurpurea occurring in the Tennessee River basin. Our data suggest that these morphologically similar species do not co-occur, as was previously believed. Instead, we conclude that the two species most likely share a common ancestor, but became isolated within each basin and experienced allopatric speciation. Updates to nomenclature, taxonomic placement, and recovery plans for the investigated species are needed.  相似文献   

16.
Measurements of densities and distribution of populations ofH. ulvae were made in the lower Medway estuaryduring the period1969–1975, together with measurements of salinity, substrateparticle size and macrophyte distribution. Results indicatedthat sheltered siteswere more favourable to the snail as shownby higher population density and greater shell size. *Current address: Southern Water Authority, Maidstone, Kent (Received 20 May 1979;  相似文献   

17.
Conservation genetics is a powerful tool to assess the population structure of species and provides a framework for informing management of freshwater ecosystems. As lotic habitats become fragmented, the need to assess gene flow for species of conservation management becomes a priority. The eastern hellbender (Cryptobranchus alleganiensis alleganiensis) is a large, fully aquatic paedamorphic salamander. Many populations are experiencing declines throughout their geographic range, yet the genetic ramifications of these declines are currently unknown. To this end, we examined levels of genetic variation and genetic structure at both range-wide and drainage (hierarchical) scales. We collected 1,203 individuals from 77 rivers throughout nine states from June 2007 to August 2011. Levels of genetic diversity were relatively high among all sampling locations. We detected significant genetic structure across populations (Fst values ranged from 0.001 between rivers within a single watershed to 0.218 between states). We identified two genetically differentiated groups at the range-wide scale: 1) the Ohio River drainage and 2) the Tennessee River drainage. An analysis of molecular variance (AMOVA) based on landscape-scale sampling of basins within the Tennessee River drainage revealed the majority of genetic variation (∼94–98%) occurs within rivers. Eastern hellbenders show a strong pattern of isolation by stream distance (IBSD) at the drainage level. Understanding levels of genetic variation and differentiation at multiple spatial and biological scales will enable natural resource managers to make more informed decisions and plan effective conservation strategies for cryptic, lotic species.  相似文献   

18.
RAPD variation was examined in nine populations of Campanulamicrodonta Koidz., endemic to the Izu Islands, Japan. Ninety-eightbands were obtained for all populations, 94% of which were polymorphicat least within a population. Shannon's H values were calculated;these have frequently been used in RAPD studies to estimategenetic diversity. The values within populations did not correlatewith the allozyme gene diversity estimated by a previous studyor with distance from the Japanese mainland. The possible reasonsfor this discrepancy are different selection regimes betweenthe two markers, higher RAPD mutation rates, and each marker'sdifferent coverage of genomes. Cluster analysis of genetic similaritiessuggested that colonization of each island probably occurredonce, except for Miyake Island, where immigration has occurredat least twice. Copyright 2001 Annals of Botany Company AMOVA, Campanula microdonta Koidz., insular endemic plant, genetic diversity, population genetic structure, RAPD  相似文献   

19.
We used sequences of mitochondrial cytb and 16SrRNA gene segments in order to clarify the genetic diversity and population structure in three Chinese estuary populations of Coilia mystus: 21 individuals from ChangJiang River (Yangtze River) estuary, 22 from MinJiang River estuary, and 22 from ZhuJiang River (Pearl River) estuary (65 individuals total). We obtained 607 base pairs of consensus cytb sequence. Thirty four distinct haplotypes were detected among the 65 cytb sequences. The indexes of nucleotide diversity (π) in these three populations were ChangJiang 0.533%, MinJiang 1.135%, and ZhuJiang 0.268%. MinJiang is the largest of the three populations. Genetic distances within the populations were between 0.3 and 1.2%, and 0.8 to 10.8% among populations. The largest genetic distance was 10.8% between the ChangJiang and ZhuJiang populations, and the smallest was 0.8% between MinJiang and ZhuJiang populations. Analysis of molecular variance (AMOVA) analysis revealed that variation among populations accounts for 90.25% of total variation, suggesting that this is the main source of total variance. We obtained 470 base pairs of consensus sequence of 16SrRNA. We detected 19 distinct haplotypes among the 65 sequences. The indexes of nucleotide diversity (π) in these three populations were ChangJiang 0.108%, MinJiang 0.843%, and ZhuJiang 0.097%. MinJiang is also the largest among these three populations. Genetic distances were between 0.1 and 0.9% within populations and 0.5 to 1.9% between populations. The largest genetic distance was the 1.9% between the ChangJiang and MinJiang populations, and the smallest was 0.5% between the MinJiang and the ZhuJiang populations. AMOVA analysis disclosed that variation among populations accounts for 74.61% of total variation, suggesting that this is the main source of total variation. The results of this study suggest that the three Coilia mystus populations, especially the most isolated Changjiang population, have developed significant genetic structure.  相似文献   

20.
Allozyme analysis was used to determine patterns of genetic variation within and between populations of Barbus neefi. The products of 29 loci were analysed, with 17 loci being monomorphic in all populations. The genetic variability estimates compared well with values reported in the literature. The percentage of polymorphic loci (0.95 criterion) ranged from 0–20.69% and average expected heterozygosity from 0.004–0.069. Headstream populations generally revealed lower genetic variability than populations in low lying areas, which emphasizes the importance of conserving headstream populations. Fixed allele mobility differences were observed at the MPI-1 protein coding locus between the Selons River population and the other populations. The measures of genetic differentiation as assessed by F-statistics, the effective number of migrants per generation and Nei's unbiased genetic distance consistently separated the Selons River population from the rest. Nevertheless, these estimates all fell within the range considered for conspecific populations. There was also a clear genetic division between populations from north and south of the Olifants River. The three populations from the Dorps, Spekboom and Blyde Rivers (Limpopo River system) and the population from the Crocodile River (Incomati River system) showed negligible genetic differentiation. Human-assisted transfer of populations may be responsible for this close similarity.  相似文献   

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