植物盐胁迫应答蛋白质组学分析

土壤盐渍化是限制植物生长和分布的关键因素之一,揭示植物盐胁迫应答的分子机理是借助分子生物学手段提高植物耐盐性的基础.近年来,人们利用高通量蛋白质组学技术分析了拟南芥、水稻等19种植物的盐胁迫应答蛋白质表达图谱.从植物类群(盐生植物和甜土植物)、组织器官(根、地上部分/茎、胚根和胚轴、叶片、花序和配子体)、细胞(悬浮培养细胞、愈伤组织细胞和单细胞生物)和亚细胞结构(叶绿体、质膜和质外体)几方面整合分析了植物盐胁迫应答蛋白质组表达模式特征,主要特征包括:(1)盐生植物通过全面调节细胞骨架重塑、离子转运和区隔化、渗透平衡、活性氧(ROS)清除、信号转导、光合作用和能量代谢等信号与代谢网络体系,获得相对较高的抗/耐盐能力;(2)植物地上部分(叶片、茎、配子体)或光合组织细胞(悬浮培养细胞、愈伤组织细胞和单细胞盐藻)通过调节参与光合作用、碳和能量代谢、ROS清除过程蛋白质的表达模式应对盐胁迫环境;(3)植物地下部分(根、胚根)通过调控信号转导和离子转运相关蛋白质感知/传递盐胁迫信号并维持离子平衡;(4)花序中参与渗透调节、转录调控、蛋白质加工和ROS清除的蛋白质在盐胁迫条件下变化显著;(5)叶绿体通过调控参与光合作用、蛋白质加工和周转,以及氧化还原系统平衡等过程应对盐胁迫;(6)质外体中参与细胞壁代谢、胁迫防御和信号转导过程的蛋白质受盐胁迫影响明显;(7)细胞膜中参与维持膜结构稳定、物质/离子运输和信号转导过程的蛋白质对植物盐胁迫应答具有重要作用.这些分析为深入研究植物耐盐的分子机制提供了重要信息.     

解析植物冷信号转导途径: 植物如何感知低温

低温胁迫(冷害和冻害)严重影响植物的生长发育和地理分布, 是制约作物产量和品质的主要因素之一。在自然界, 植物通过感知低温信号并启动一系列响应机制来抵御冷冻伤害。MAP蛋白激酶家族在植物响应逆境胁迫信号过程中发挥重要作用, 但其是否参与冷冻胁迫信号传递仍不清楚。最近, 朱健康、杨淑华和种康研究团队先后报道了拟南芥(Arabidopsis thaliana)和水稻(Oryza sativa)通过MAPK级联反应途径参与冷冻胁迫应答反应, 通过磷酸化ICE1来调控其稳定性, 并阐明了ICE1提高植物抗冷冻能力的分子机制。他们的研究完善了ICE1介导的低温应答网络, 是植物低温应答研究领域的重要突破, 并为未来的作物分子设计育种提供了强有力的理论依据。     

植物类LORELEI糖基磷脂酰肌醇锚定蛋白研究进展

类LORELEI糖基磷脂酰肌醇锚定蛋白(LLG)定位于细胞质膜外表面, 作为CrRLK1L家族类受体激酶的分子伴侣, 参与其转运和胞外信号转导, 从而调控植物生殖发育以及免疫与逆境应答等过程。LLG2/3与ANX和BUPS互作, 调控花粉管顶端生长与爆裂。LLG1与FER (FERONIA)互作, 调控下游的NADPH氧化酶产生活性氧(ROS), 促进根部细胞伸长和根毛生长。此外, LLG1作为FER的共受体, 与快速碱化因子(RALFs)互作, 调节G蛋白β亚基(AGB1)和质膜H ⁺-ATPase功能、胞内ROS稳态以及Ca ²⁺瞬变, 引起根部和气孔的盐应答反应。LLG1与FLS2和EFR互作激活下游RbohD, 调节ROS产生, 调控植物免疫应答。该文综述了植物LLG的相关研究进展, 可为深入理解LLG的生物学功能提供重要信息。     

植物核孔蛋白研究进展

核孔复合物(nuclear pore complex,NPC)位于核膜,是控制细胞核与细胞质之间进行蛋白质和mRNA等大分子物质转运的唯一通道。模式植物拟南芥的核孔复合物由30多种多拷贝的核孔蛋白(nucleoporins,NUPs)构成,根据它们参与形成的亚基可分为外环、内环、连接、跨膜、中心FG(phenylalanine-glycine)和核篮核孔蛋白。核孔蛋白不仅介导核质转运,而且在植物多个生命进程中发挥重要作用。该文综述了植物核孔蛋白参与核质转运、激素信号响应、生长发育、环境胁迫应答、免疫防御等的研究进展,为植物核孔蛋白生物学功能的系统认知及深入探索提供参考。     

植物TOR激酶响应上游信号的研究进展

雷帕霉素靶蛋白(TOR)是真核生物中高度保守的丝氨酸/苏氨酸蛋白激酶, 能整合营养、能量、生长因子及环境信号, 协调细胞增殖、生长和代谢等过程, 是真核生物生长发育的核心调控因子。近年来, 随着相关研究系统的建立, 植物TOR的功能和机制研究取得了众多突破, 发现其进化上保守的生物学功能及植物中特有的信号通路。该文概述了TOR蛋白复合体的构成, 以及植物TOR响应糖、营养元素(氮、磷和硫)、激素及逆境胁迫信号来调控下游基因转录、蛋白翻译、代谢、细胞自噬和胁迫应答等生物学过程的分子机制, 并提出了植物TOR领域一些亟待解决的科学问题, 以期为全面揭示植物TOR的生物学功能提供参考。     

拟南芥转录因子GRAS家族基因群响应渗透和干旱胁迫的初步探索

GRAS家族是一类植物特有的转录调控因子,已有报道表明该家族基因在植物生长发育和光信号转导过程中具有重要作用.目前在拟南芥(Arabidopsis thaliana)基因组中已鉴定了33个GRAS家族基因.利用功能基因组学和生物信息学手段,通过基因芯片数据挖掘和基因功能预测,对拟南芥GRAS家族基因在渗透和干旱胁迫过程中的应答模式进行了初步探索,提出了一类响应渗透胁迫和干旱胁迫的拟南芥GRAS家族基因.以SCL13为例,利用基因芯片相关性和GO分析,对其在渗透胁迫信号转导过程中可能的调控机制进行了预测和分析.这一研究将为阐明GRAS家族基因参与水分胁迫的分子机制提供新的思路,同时也为植物抗逆分子育种提供候选基因.     

拟南芥转录因子GRAS 家族基因群响应渗透和干旱胁迫的初步探索

GRAS家族是一类植物特有的转录调控因子, 已有报道表明该家族基因在植物生长发育和光信号转导过程中具有重要作用。目前在拟南芥(Arabidopsis thaliana)基因组中已鉴定了33个GRAS家族基因。利用功能基因组学和生物信息学手段,通过基因芯片数据挖掘和基因功能预测, 对拟南芥GRAS家族基因在渗透和干旱胁迫过程中的应答模式进行了初步探索, 提出了一类响应渗透胁迫和干旱胁迫的拟南芥GRAS家族基因。以SCL13为例, 利用基因芯片相关性和GO分析, 对其在渗透胁迫信号转导过程中可能的调控机制进行了预测和分析。这一研究将为阐明GRAS家族基因参与水分胁迫的分子机制提供新的思路, 同时也为植物抗逆分子育种提供候选基因。     

植物小肽信号生物学功能及其在作物改良中研究进展

作为植物体内一类重要的信号分子,小肽在飞摩尔(fmol)级的浓度下被相应的细胞质膜类受体激酶识别并结合,开启小肽-受体介导的细胞间信号转导过程,从而调控植物干细胞的生长与增殖,调节根、茎、叶、花和果实等多种植物器官的发育,协调植物响应生物和非生物胁迫等多种生理过程。随着研究的不断深入,越来越多的报道揭示了小肽在水稻(Oryza sativa)、玉米(Zea mays)、马铃薯(Solanum tuberosum)及番茄(Solanum lycopersicum)等多种作物农艺性状中的重要调控功能,暗示着小肽信号在作物遗传改良中的巨大应用潜力。本文系统总结了小肽-受体介导的信号转导模式在植物中的生物学功能及分子机制,重点综述了小肽在调控作物产量、品质和抗性等重要农艺性状中的研究进展,并讨论了小肽信号应用于作物育种改良的策略,最后提出了小肽研究的未来方向。     

利用蛋白质组学技术揭示的植物高温胁迫响应机制

高温是限制植物生长和产量的主要非生物胁迫因子.近年来,蛋白质组学研究为我们从系统生物学水平深入认识植物高温胁迫应答的复杂的分子机制提供了重要信息.目前,已经分析了模式植物拟南芥、主要粮食作物(大豆、水稻和小麦)、耐热植物(匍匐剪股颖、马齿苋、假虎刺),以及野生毛葡萄、胡杨、苜蓿、半夏等应答高温胁迫过程中的蛋白质组变化特征.这些研究共鉴定到838种响应高温胁迫的蛋白质,其中534种蛋白质表达受到高温诱导,304种蛋白质表达受到抑制.本文整合分析了上述植物在应对不同程度高温胁迫(30～45 ℃处理0～10 d)时蛋白质表达模式的变化特征,为解释高温胁迫应答网络体系中重要的信号与代谢通路(如：信号转导、胁迫防御、糖类与能量代谢、光合作用、转录、蛋白质合成与命运、膜与转运等)的变化提供了证据和线索,为深入认识植物应答高温胁迫的分子调控机制奠定了坚实的基础.     

植物RLCK的生物学功能与信号途径研究进展

类受体胞质激酶(receptor-like cytoplasmic kinase,RLCK)是一类无胞外信号肽结构域和跨膜结构域的激酶家族。在植物中,RLCK通过磷酸化下游靶蛋白而发挥功能,主要参与了植物的生长、信号转导、非生物胁迫和生物胁迫应答等生理过程。本文着重介绍拟南芥和水稻中RLCK的分类、生物学功能及其参与的信号途径。     

WUSCHEL介导的固有免疫: 植物干细胞抵御病毒侵害的新机制

植物茎顶端分生组织干细胞是具有持续分化潜能的细胞团, 是植物体地上部所有组织和器官的来源。由于植物行固着生长模式, 其无法通过移动来趋利避害, 因此保护植物干细胞免受病毒和其它病原体侵害对于植物正常生长发育至关重要。尽管人们很早就观察到植物茎顶端干细胞区域与其它部位相比具有极强的抗病毒特性, 但很长时间以来对于植物干细胞如何抵御病毒侵染却知之甚少。近日, 中国科学技术大学赵忠团队阐明了拟南芥(Arabidopsis thaliana)茎顶端干细胞通过WUS蛋白介导的固有免疫反应抵御病毒侵害的机制。WUS能被黄瓜花叶病毒诱导表达, 并抑制病毒在茎尖中央区和周边区积累。WUS通过直接抑制S-腺苷-L-甲硫氨酸依赖的甲基转移酶(SAM MTase)基因的转录, 影响rRNA的加工和核糖体的稳定性, 使病毒蛋白质合成受阻, 从而阻止病毒的复制与传播。该研究揭示了植物体的一种保守且广谱抗病毒策略, 具有重要的理论意义和应用价值。     

A comparison of oligogalacturonide- and auxin-induced extracellular alkalinization and growth responses in roots of intact cucumber seedlings

Oligogalacturonic acid (OGA) affects plant growth and development in an antagonistic manner to that of the auxin indole-3-acetic acid (IAA), the mechanism by which remains to be determined. This study describes the relationship between IAA and OGA activity in intact cucumber (Cucumis sativus) seedlings. Both OGA and IAA induced rapid and transient extracellular alkalinization; however, the characteristics of the OGA and IAA responses differed in their kinetics, magnitude, calcium dependence, and region of the root in which they induced their maximal response. IAA (1 microM) induced a saturating alkalinization response of approximately 0.2 pH unit and a rapid reduction (approximately 80%) in root growth that only partially recovered over 20 h. OGAs, specifically those with a degree of polymerization of 10 to 13, induced a maximal alkalinization response of 0.48 pH unit, but OGA treatment did not alter root growth. Saturating concentrations of OGA did not block IAA-induced alkalinization or the initial IAA-induced inhibition of root growth but allowed IAA-treated roots to recover their initial growth rate within 270 min. IAA-induced alkalinization occurs primarily in the growing apical region of the root, whereas OGA induced its maximal response in the basal region of the root. This study demonstrates that OGA and IAA act by distinct mechanisms and that OGA does not simply act by inhibition of IAA action. These results also suggest that IAA-induced extracellular alkalinization is not sufficient to account for the mechanism by which IAA inhibits root growth.     

Symplastic communication in the root cap directs auxin distribution to modulate root development

Root cap not only protects root meristem, but also detects and transduces the signals of environmental changes to affect root development. The symplastic communication is an important way for plants to transduce signals to coordinate the development and physiology in response to the changing enviroments. However, it is unclear how the symplastic communication between root cap cells affects root growth. Here we exploit an inducible system to specifically block the symplastic communication in the root cap. Transient blockage of plasmodesmata (PD) in differentiated collumella cells severely impairs the root development in Arabidopsis, in particular in the stem cell niche and the proximal meristem. The neighboring stem cell niche is the region that is most sensitive to the disrupted symplastic communication and responds rapidly via the alteration of auxin distribution. In the later stage, the cell division in proximal meristem is inhibited, presumably due to the reduced auxin level in the root cap. Our results reveal the essential role of the differentiated collumella cells in the root cap mediated signaling system that directs root development.     

Apoplastic pH during low-oxygen stress in Barley

BACKGROUND AND AIMS: Anoxia leads to an energy crisis, tolerance of which varies from plant to plant. Although the apoplast represents an important storage and reaction space, and engages in the mediation of membrane transport, this extracellular compartment has not yet been granted a role during oxygen shortage. Here, an attempt is made to highlight the importance of the apoplast during oxygen stress and to test whether information about it is transferred systemically in Hordeum vulgare. METHODS: Non-invasive ion-selective microprobes were used which, after being inserted through open stomata, directly contact the apoplastic fluid and continuously measure the apoplastic pH and changes to it. KEY RESULTS: (a) Barley leaves respond to oxygen stress with apoplastic alkalinization and membrane depolarization. These responses are persistent under anoxia (N2; O2 < 3%) but transient under hypoxia. (b) Being applied to the root, the information 'anoxia' is signalled to the leaf as an increase in pH, whereas 'hypoxia' is not: flooding of the roots within the first 2 h has no effect on the leaf apoplastic pH, whereas anoxia (N2) or chemical anoxia (NaCN/salicylic hydroxamic acid) rapidly increase the leaf apoplastic pH. (c) Under anoxia, the proton motive force suffers a decrease by over 70 %, which impairs H(+) -driven transport. CONCLUSIONS: Although anoxia-induced apoplastic alkalinization is a general response to stress, its impact on the proton motive force (reduction) and thus on transport mediation of energy-rich compounds is evident. It is concluded that anoxia tolerance depends on how the plant is able to hold the proton motive force and H(+) turnover at a level that guarantees sufficient energy is harvested to overcome the crisis.     

被子植物小热激蛋白家族的比较基因组学分析

小热激蛋白(sHSP)是一类重要的响应外界环境变化以及调控植物生长发育的蛋白家族。基于在睡莲(Nymphaea colorata)、水稻(Oryza sativa)、拟南芥(Arabidopsis thaliana)和葡萄(Vitis vinifera)中分别鉴定到的33个NcsHSPs、24个OssHSPs、17个AtsHSPs和47个VvsHSPs, 表明sHSP家族可分为12个亚家族, 不同亚家族包含不同的sHSP成员数目、保守基序、基因结构以及复制基因数目。在4种模式被子植物的sHSP成员中共鉴定到12个基因复制事件, 片段复制事件和串联复制事件均与sHSP成员的扩增有关, 且片段复制事件发生的时间早于串联复制事件。在所有sHSP成员中, 拟南芥和葡萄的sHSP成员的同源性最高, 其次为睡莲和葡萄的sHSP成员。sHSP家族在被子植物中可能向更短的氨基酸长度、更小的分子量、更简单的基因结构以及更集中的染色体分布进化。此外, 在睡莲、水稻、拟南芥和葡萄中鉴定了一些可能与调控植物生长发育相关的候选基因。研究结果为4种模式被子植物sHSP家族的比较基因组学研究奠定了重要基础, 并为其它被子植物sHSP家族的研究提供重要参考。     

植物根系质外体屏障研究进展

根是植物吸收水分和矿质营养以维持生命活动的重要器官。根系的构型和超微结构具有物种特异性, 对水分和矿质营养的吸收有不同程度的影响。其中, 内、外皮层的木栓层和凯氏带是2种重要的质外体屏障, 可非定向地阻断水分和离子运输, 在植物生长发育及响应逆境胁迫中发挥重要作用。尽管如此, 植物根系质外体屏障的结构、化学组成、生理功能、生物合成及其调控仅在模式植物拟南芥(Arabidopsis thaliana)中被广泛研究。近年来, 关于作物大麦(Hordeum vulgare)、水稻(Oryza sativa)以及部分牧草的根系质外体屏障研究报道逐渐增多。该文系统比较了拟南芥、大麦、水稻以及部分牧草根系质外体屏障的异同, 提出今后的研究方向, 以期为深入探索禾本科作物和牧草根系质外体屏障在生长发育和逆境适应中的作用奠定理论基础, 并为作物和牧草育种工作提供新思路。     

The Role of Protons in the Auxin-induced Root Growth Inhibition - A Critical Reexamination

According to the acid growth theory of auxin action, it has been proposed that auxin decreases root growth by inhibiting the proton pump, thus causing an alkalinization of the apoplast. This paper critically tests this hypothesis with corn (Zea mays L.) roots. It was found that: i) the pH-growth curve for roots exhibits a broad optimum ranging from pH 4.5 to 9. ii) Any acid-induced growth is of very short duration, iii) The low sensitivity of root growth to external pH is independent of both the pump activity and the buffer capacity of the bathing solution, iv) Neither incubation in acidic buffer nor stimulation of the proton pump reverts the auxin-induced root growth inhibition. It is concluded that the auxin-induced root growth inhibition is not mediated by cell wall alkalinization.     

Transient alkalinization in the leaf apoplast of Vicia faba L. depends on NaCl stress intensity: an in situ ratio imaging study

The apoplast is suggested to be involved not only in the response, but also in the perception and transduction of various environmental signals. In this context, apoplastic alkalinization has previously been discussed as a general stress factor caused by abiotic and biotic stress events. In this study, an ion-sensitive fluorescence probe in combination with inverted fluorescence microscopy has been used for in planta monitoring of apoplastic shoot pH during challenging of Vicia faba L. plants by NaCl stress encountered at the roots. We demonstrate that transient increases in leaf apoplastic pH are dependent on the NaCl stress intensity. Moreover, we have visualized spatial pH gradients within the leaf apoplast. Our results indicate that these pH responses are propagated from root to leaf and that this occurs along the apoplast.     

Do pH changes in the leaf apoplast contribute to rapid inhibition of leaf elongation rate by water stress? Comparison of stress responses induced by polyethylene glycol and down‐regulation of root hydraulic conductivity

We have dissected the influences of apoplastic pH and cell turgor on short-term responses of leaf growth to plant water status, by using a combination of a double-barrelled pH-selective microelectrodes and a cell pressure probe. These techniques were used, together with continuous measurements of leaf elongation rate (LER), in the (hidden) elongating zone of the leaves of intact maize plants while exposing roots to various treatments. Polyethylene glycol (PEG) reduced water availability to roots, while acid load and anoxia decreased root hydraulic conductivity. During the first 30 min, acid load and anoxia induced moderate reductions in leaf growth and turgor, with no effect on leaf apoplastic pH. PEG stopped leaf growth, while turgor was only partially reduced. Rapid alkalinization of the apoplast, from pH 4.9 ± 0.3 to pH 5.8 ± 0.2 within 30 min, may have participated to this rapid growth reduction. After 60 min, leaf growth inhibition correlated well with turgor reduction across all treatments, supporting a growth limitation by hydraulics. We conclude that apoplastic alkalinization may transiently impair the control of leaf growth by cell turgor upon abrupt water stress, whereas direct hydraulic control of growth predominates under moderate conditions and after a 30-60 min delay following imposition of water stress.     

Proton flows across the plasma membrane in microperforated characean internodes: tonoplast injury and involvement of cytoplasmic streaming

Microperforation of characean cell wall with a glass micropipette in the absence of the tonoplast impalement was found to cause rapid alkalinization of the apoplast by 2–3 pH units, which may rigidify the cell wall structure, thus protecting the cell from further injury. A similar but a deeper insertion of a microneedle, associated with piercing the tonoplast and with an action potential generation, led to a considerable delay in the apoplast alkalinization without affecting the amplitude of the eventual increase in pH. The retardation by the mechanically elicited action potential of the incision-mediated pH transients in the apoplast contrasted sharply to the enhancement of these pH transients by the action potential triggered electrically before the microperforation. Hence, the delay of the apoplast alkalinization was not related to basic ionic mechanisms of plant action potentials. Measurements of the vacuolar pH after mechanical elicitation of an action potential indicate that the tonoplast piercing was accompanied by leakage of protons from the vacuole into the cytoplasm, which may strongly acidify the cytoplasm around the wounded area, thus collapsing the driving force for H⁺ influx from the medium into the cytoplasm. The lag period preceding the onset of external alkalinization was found linearly related to the duration of temporal cessation of cytoplasmic streaming. The results suggest that the delayed alkalinization of the apoplast in the region of tonoplast wounding reflects the localized recovery of the proton motive force across the plasmalemma during replacement of the acidic cytoplasm with fresh portions of unimpaired cytoplasm upon restoration of cytoplasmic streaming.