Catalytic hydrothermal processing of microalgae: decomposition and upgrading of lipids

Hydrothermal processing of high lipid feedstock such as microalgae is an alternative method of oil extraction which has obvious benefits for high moisture containing biomass. A range of microalgae and lipids extracted from terrestrial oil seed have been processed at 350 °C, at pressures of 150-200 bar in water. Hydrothermal liquefaction is shown to convert the triglycerides to fatty acids and alkanes in the presence of certain heterogeneous catalysts. This investigation has compared the composition of lipids and free fatty acids from solvent extraction to those from hydrothermal processing. The initial decomposition products include free fatty acids and glycerol, and the potential for de-oxygenation using heterogeneous catalysts has been investigated. The results indicate that the bio-crude yields from the liquefaction of microalgae were increased slightly with the use of heterogeneous catalysts but the higher heating value (HHV) and the level of de-oxygenation increased, by up to 10%.     

Fatty acid composition of cholesteryl esters of human meibomian gland secretions

Very long chain cholesteryl esters (CE) are a major group of lipids found in meibomian gland secretions (MGS, also called meibum). MGS are produced by the meibomian glands of human and animal eyelids. They are a critical part of the tear film which covers the exposed ocular surface and serves various physiological roles. The composition of CE of MGS is complex, and still remains poorly understood. Here, a liquid chromatography-ion trap mass spectrometry (LC-MS) procedure developed to analyze CE is described, and a detailed composition of human meibomian CE is reported.MGS were collected from donors, analyzed without any modifications by LC-MS in positive and negative ion modes (PIM and NIM), and quantified using lipid standards where available.CE comprised about 30% of human meibum by mass. More than 40 individual CE species were found and characterized. In PIM, CE were observed as spontaneously in-source generated product ions m/z 369. The signals of the proton adducts of intact CE (M+H)⁺ were of very low intensity. In NIM, all tested CE spontaneously fragmented in-source producing signals of their respective FA. By combining the LC and MS information, the most abundant CE were found to be based on FA ranging from C₁₆ to at least C₃₂ in the following order C_26:0 > C_25:0 > C_24:0 > C_27:0 > C_24:1 = C_18:1 = C_20:0 > other CE.We conclude that the FA composition of CE can be successfully established in LC-MS experiments conducted in NIM. Meibomian CE have a large presence of both saturated and unsaturated FA with an average molar ratio of 4 to 1, respectively.     

Quantification of cis and trans influences in [PtX(PPh3)3] complexes. A P NMR study

In [PtX(PPh₃)₃]⁺ complexes (X = F, Cl, Br, I, AcO, NO₃, NO₂, H, Me) the mutual cis and trans influences of the PPh₃ groups can be considered constants in the first place, therefore the one bond Pt-P coupling constants of P_(cis) and P_(trans) reflect the cis and trans influences of X. The compounds [PtBr(PPh₃)₃](BF₄) (2), [PtI(PPh₃)₃](BF₄) (3), [Pt(AcO)(PPh₃)₃](BF₄) (4), [Pt(NO₃)(PPh₃)₃](BF₄) (5), and the two isomers [Pt(NO₂-O)(PPh₃)₃](BF₄) (6a) and [Pt(NO₂-N)(PPh₃)₃](BF₄) (6b) have been newly synthesised and the crystal structures of 2 and 4·CH₂Cl₂·0.25C₃H₆O have been determined. From the ¹J_PtP values of all compounds we have deduced the series: I > Br > Cl > NO₃ > ONO > F > AcO > NO₂ > H > Me (cis influence) and Me > H > NO₂ > AcO > I > ONO > Br > Cl > F > NO₃ (trans influence). These sequences are like those obtained for the (neutral) cis- and trans-[PtClX(PPh₃)₂] derivatives, showing that there is no dependence on the charge of the complexes. On the contrary, the weights of both influences, relative to those of X = Cl, were found to depend on the charge and nature of the complex.     

Hydrothermal liquefaction of the brown macro-alga Laminaria saccharina: effect of reaction conditions on product distribution and composition

The brown macro-alga Laminaria saccharina was converted into bio-crude by hydrothermal liquefaction in a batch reactor. The influence of reactor loading, residence time, temperature and catalyst (KOH) loading was assessed. A maximum bio-crude yield of 19.3 wt% was obtained with a 1:10 biomass:water ratio at 350 °C and a residence time of 15 min without the presence of the catalyst. The bio-crude had an HHV of 36.5 MJ/kg and is similar in nature to a heavy crude oil or bitumen. The solid residue has high ash content and contains a large proportion of calcium and magnesium. The aqueous phase is rich in sugars and ammonium and contains a large proportion of potassium and sodium.     

A novel transition state analog inhibitor of guanase based on azepinomycin ring structure: Synthesis and biochemical assessment of enzyme inhibition

Synthesis and biochemical inhibition studies of a novel transition state analog inhibitor of guanase bearing the ring structure of azepinomycin have been reported. The compound was synthesized in five-steps from a known compound and biochemically screened against the rabbit liver guanase. The compound exhibited competitive inhibition profile with a K_i of 16.7 ± 0.5 μM.     

Capturing the spin state diversity of iron(III)-aryl porphyrins: OLYP is better than TPSSh

DFT calculations with a variety of exchange-correlation functionals, including PW91, OLYP, TPSSh, B3LYP and B3LYP*, have been carried out on the low-energy spin states of chloroiron(III) porphyrin and four aryliron(III) porphyrins, viz. Fe^III(P)Ph (S = 1/2), Fe^III(P)C₆F₅ (S = 5/2), Fe^III(P)(3,4,5-C₆F₃H₂) (S = 1/2), Fe^III(P)(2,4,6-C₆F₃H₂) (S = 5/2), where the expected spin states have been indicated within parentheses. Qualitatively, OLYP reproduces all the expected ground spin states. B3LYP appears to have some difficulty yielding the observed sextet ground states. B3LYP*, TPSSh and PW91 all fail to reproduce the sextet ground states, the latter two by rather large margins of energy. As far as this study is concerned, the overall performance of the functionals appears to be OLYP/OPBE > B3LYP > B3LYP* >> TPSSh > PW91/BLYP/BP86/TPSS.     

Protective effects of veskamide, enferamide, becatamide, and oretamide on H2O2-induced apoptosis of PC-12 cells

Veskamide, enferamide, becatamide, and oretamide are phenolic amides whose analogues are found in plants. In this study, the four amides were prepared by chemical synthesis and their protective effects on H₂O₂-induced apoptosis in PC-12 cells were investigated. The syntheses were relatively simple and the yields were more than 43%. Using NMR spectroscopic methods, the chemical structures of veskamide, enferamide, becatamide, and oretamide were confirmed. The decreasing order of the protective effects on H₂O₂-induced apoptosis was becatamide > enferamide ≥ oretamide > veskamide. In fact, becatamide suppressed H₂O₂-induced mitochondrial membrane depolarization in a dose-dependent manner. At the concentration of 10 μM, becatamide maintained mitochondrial membrane depolarization at 16% compared to 51% in H₂O₂-treated PC-12 cells (P < 0.05). Also, at the same concentration, becatamide inhibited H₂O₂-induced caspase-9 activation and caspase-independent chromatin condensation by 68% (P < 0.05) and 73% (P < 0.05), respectively. This is the first report about the chemical synthesis of becatamide and its potential biological activity to inhibit H₂O₂-induced apoptosis of PC-12 cells via protecting mitochondrial membrane integrity, thereby suppressing caspase-9 activation and chromatin condensation.     

Interconversion between cyclodimer and cyclotrimer: Synthesis and characterization of cyclo-[Pd(II)Cl2(N-N)] complexes

The reaction of (COD)PdCl₂ (COD = 1,5-cyclooctadiene) with (3-Py)₂SiR₁R₂ (3-Py = 3-pyridyl; R₁ = Ph, R₂ = Ph (m-pdps); R₁ = Ph, R₂ = Me (m-pmps)) in acetone affords single crystals consisting of cyclodimers, [PdCl₂((3-Py)₂SiR₁R₂)]₂, whereas the same reaction in a mixture of dichloromethane and ethanol yields amorphous spheres consisting of cyclotrimers, [PdCl₂((3-Py)₂SiR₁R₂)]₃. In a boiling chloroform solution, the cyclodimers are completely converted to cyclotrimers. These cyclotrimers, in the 10−60 °C range, are partly returned to cyclodimers. By contrast, the reaction of (COD)PdCl₂ with (3-Py)₂SiR₁R₂ (R₁ = Bu, R₂ = Me (m-pbms); R₁ = dodecyl, R₂ = Me (m-pddms)) yields amorphous spheres consisting of cyclotrimers irrespective of solvents. Both [PdCl₂(m-pbms)]₃ and [PdCl₂(m-pddms)]₃ are initially cyclotrimers in chloroform, but they exist as a mixture of cyclodimers and cyclotrimers in solution in the 10−60 °C range. The metallacycles tend to form cyclodimers in the order m-pdps > m-pmps > m-pbms > m-pddms. The equilibrium between cyclodimers and the cyclotrimers is sensitive to solvent, temperature, and concentration as well as molecular structure.     

Insecticidal activity of recombinant avidin produced in yeast

An expression construct encoding chicken (Gallus gallus) avidin was assembled from amplified fragments of genomic DNA. Recombinant, functional avidin was produced in Pichia pastoris, with yields of up to 80 mg/l of culture supernatant. The recombinant avidin had similar insecticidal activity to egg white avidin when assayed against larvae of a lepidopteran crop pest, cabbage moth (Mamestra brassicae), causing >90% reduction in growth and 100% mortality when fed in optimised diets at levels of 1.5 μM and 15 μM (100 ppm and 1000 ppm wet weight of recombinant protein). The recombinant protein was also highly toxic to a hemipteran pest, the pea aphid (Acyrthosiphon pisum), when fed in liquid artificial diet, causing 100% mortality after 4 days when present at concentrations ≥3.8 μM (0.25 mg/ml, 250 ppm). Mortality was dose-dependent, with an estimated LC₅₀ of 2.1 μM. Toxicity to A. pisum was prevented by biotin supplementation of diet. In contrast, avidin had no significant effects on the survival of cereal aphid (Sitobion avenae) at concentrations up to 30 μM in liquid diet. Analysis of genomic DNA showed that symbionts from both aphid species lack the ability to synthesise biotin de novo. Cereal aphids appear to be less sensitive to recombinant avidin in the diet through proteolysis of the ingested protein, which would allow recovery of bound biotin.     

Tolerance of apexes of coral Pocillopora damicornis L. to cryoprotectant solutions

In this study, we investigated the tolerance of Pocillopora damicornis apexes to treatments with solutions containing penetrating and non-penetrating cryoprotective agents (CPAs). CPAs were employed individually or in binary, tertiary or quaternary solutions. In some experiments apexes were treated successively with two CPA solutions with increasing total concentration. P. damicornis apexes withstood exposure for up to 30 min to solutions containing 0.6–0.8 M sucrose (Suc) or trehalose (Tre). When apexes were treated with binary cryoprotectant solutions containing Suc and ethylene glycol (EG), methanol (Meth), dimethyl sulfoxide (Me₂SO) or glycerol (Gly), the CPAs employed in combination with Suc could be ranked in the following order of decreasing tolerance: EG > Meth > Me₂SO > Gly. P. damicornis apexes tolerated exposure to complex CPA solutions containing Suc, Me₂SO, EG and/or Meth with a total molarity of 2.45 M. In experiments where two successive CPA solutions were employed, apexes withstood treatment with the second, more concentrated solution at 0 °C for up to 10 min. These preliminary results pave the way to the development of a cryopreservation protocol for P. damicornis apexes.     

P Chemical shift anisotropies of dihalobis(trialkylphosphine)nickel(II) complexes

The ³¹P CP-MAS NMR spectra of trans-square-planar complexes of dihalonickel(II) complexes with tribenzyl-, tricyclohexyl- and tricyclohexylmethylphosphines have been examined and the chemical shift tensors determined. The spans, δ₁₁-δ₃₃, of the tensor components decrease with change in the halide, Cl > Br > I, for all the tertiary phosphines due principally to the deshielding of the δ₃₃ component.     

3D hydrogen bonded metal-organic frameworks constructed from [M(H2O)6][M′(dipicolinate)2] · mH2O (M/M′ = Zn/Ni or Ni/Ni). Identification of intercalated acyclic (H2O)6/(H2O)10 clusters

New heterodinuclear Zn^II/Ni^II (1) and homodinuclear Ni^II/Ni^II (2) water-soluble and air stable compounds of general formula [M(H₂O)₆][M′(dipic)₂] · mH₂O have been easily prepared by self-assembly of the corresponding metal(II) nitrates with dipicolinic acid (H₂dipic) in water solution at room temperature.  The compounds have been characterized by IR, UV/Vis and atomic absorption spectroscopies, elemental and X-ray single crystal diffraction (for 1 · 4H₂O and 2 · 5H₂O) analyses.  3D infinite polymeric networks are formed via extensive hydrogen bonding interactions involving all coordinated and crystallization water molecules, and all dipicolinate oxygens, thus contributing to additional stabilization of dimeric units, metal-organic chains and 2D layers.  In 1 · 4H₂O, the latter represent a rectangular-grid 2D framework with multiple channels if viewed along the c crystallographic axis, while in 2 · 5H₂O intercalated crystallization water molecules are associated to form acyclic nonplanar hexameric water clusters and water dimers which occupy voids in the host metal-organic matrix, with a structure stabilizing effect via host-guest interactions.  The hexameric cluster extends to the larger (H₂O)₁₀ one with an unusual geometry (acyclic helical octamer with two pendent water molecules) by taking into account the hydrogen bonds to water ligands in [Ni(H₂O)₆]²⁺.  The obtained Zn/Ni compound 1 relates to the recently reported family of heterodimetallic complexes [M(H₂O)₅M′(dipic)₂] · mH₂O (M/M′ = Cu/Co, Cu/Ni, Cu/Zn, Zn/Co, Ni/Co, m = 2, 3), what now allows to establish the orders of the metal affinity towards the formation of chelates with dipicolinic acid (Co^II > Ni^II > Zn^II > Cu^II) or aqua species (Co^II < Ni^II < Zn^II < Cu^II).     

Rh and Ir dibenzo[a,e]cyclooctatetraene complexes: Chloro, hydroxo, and mixed Au oxo complexes

New and improved procedures are reported for the synthesis of [M(DBCOT)(μ-Cl)]₂ (M = Rh, Ir; DBCOT = dibenzo[a,e]cyclooctatetraene) from MCl₃(H₂O)_x or [M(COD)(μ-Cl)]₂ and DBCOT. Treatment of [M(DBCOT)(μ-Cl)]₂ with [(LAu)₃(μ-O)]BF₄(L = PPh₃, P^tBu₃) yields the mixed-metal oxo complexes [M(DBCOT)(μ⁴-O)(AuL)₂]₂(BF₄)₂. Dimeric [Rh(DBCOT)(μ-OH)]₂ is obtained from the reaction of [M(DBCOT)(μ-Cl)]₂ with KOH in EtOH/H₂O. All complexes except [Rh(DBCOT)(μ-Cl)]₂ have been structurally characterized by single crystal X-ray diffraction.     

Synthesis, spectral and magnetical characterization of monomeric [Cu(2-NO2bz)2(nia)2(H2O)2] and structural analysis of similar [Cu(RCOO)2(L-N)2(H2O)2] complexes

A new complex of composition [Cu(2-NO₂bz)₂(nia)₂(H₂O)₂] (1) (nia = nicotinamide, 2-NO₂bz = 2-nitrobenzoate) has been prepared and its composition and stereochemistry as well as coordination mode have been determined by elemental analysis, electronic, infrared and EPR spectroscopy, magnetization measurements over the temperature range 1.8-300 K, and its structure has been solved, as well. The complex structure consists of the centrosymmetric molecules with Cu(II) atom monodentately coordinated by the pair of 2-nitrobenzoato anions and by the pair of nicotinamide molecules, forming nearly tetragonal basal plane, and by a pair of water molecules that complete tetragonal-bipyramidal coordination polyhedron about the copper atom. The complex 1 exhibits magnetic moment μ_eff = 1.86 B.M. at 300 K which decreases to μ_eff = 1.83 B.M. at 1.8 K. The magnetic susceptibility temperature dependence obeys Curie-Weiss law with Curie constant of 0.442 cm³ K mol⁻¹ and with Weiss constant of −1.0 K. EPR spectra at room temperature as well as at 77 K are of axial type with g_⊥ = 2.065 and g_∥ = 2.280 and exhibit clearly, but partially resolved parallel hyperfine splitting with A_II = 160 G, that is consistent with the determined molecular structure of 1. In order to analyze the factors influencing the degree of tetragonal distortion of coordination polyhedron, the dataset of 72 structures similar to that of 1 was extracted from CCD and analyzed. A significant correlation between the average Cu-O_ax bond length and tetragonality parameter τ which was found as a consequence of the Jahn-Teller effect.     

Cloning and expression analysis of novel Aux/IAA family genes in Gossypium hirsutum

The associations between polymorphisms of prostate stem cell antigen (PSCA-rs2294008C > T and -rs2976392G > A) and gastric cancer (GC) risk for Eastern Asians have been commonly studied, but the results were conflicting. The aim of the present study was to further assess the associations by the method of meta-analysis. The databases of Medline, Embase and CNKI (up to May 25th, 2011) were retrieved to identify eligible case-control studies. Odds ratio (OR) and 95% confidence interval (95%CI) were used to present the strength of the associations. In total, eight case-control studies in seven articles with 16792 individuals (9738 cases of GC and 7054 controls) were included in this meta-analysis. Through quantitative analyses, we found that T allele of rs2294008C > T and A allele of rs2976392G > A were significantly associated with increased GC risk [rs2294008C > T: OR (95%CI) = 1.31 (1.22-1.42), P_z-test < 0.001, P_{heterogeneity} = 0.166 for TT vs. C carriers; rs2976392G > A: OR (95%CI) = 1.36(1.24-1.50), P_z-test = 0.015, P_{heterogeneity} = 0.111 for AA vs. G carriers]. The results of subgroup analyses (according to histopathology, countries and sources of controls) indicated that T allele of rs2294008C > T and A allele rs2976392G > A were associated with increased risk of both intestinal- and diffuse-type GC, and associated with increased risk of GC for Chinese, Japanese, Koreans, PCC and HCC/PHCC. Furthermore, T allele of rs2294008C > T was also associated with increased risk of cardia and non-cardia GC, and associated with increased risk of GC for males and females. Besides those, this meta-analysis also indicated that the interactions between T allele of rs2294008C > T and A allele of rs2976392G > A was associated with increased risk of GC (A-T vs. G-T: OR = 1.16, 95%CI = 1.06-1.27, P_z-test = 0.001, P_{heterogeneity} = 0.835). Although modest limitations and potential bias cannot be eliminated, this meta-analysis suggests that PSCA -rs2294008C > T and -rs2976392G > A are potential factors of GC development for Eastern Asians, and future work may incorporate these findings and evaluate these variants as potential markers for screening and early diagnosis of GC.     

RNA isolation from loquat and other recalcitrant woody plants with high quality and yield

RNA isolation is difficult in plants that contain large amounts of polysaccharides and polyphenol compounds. To date, no commercial kit has been developed for the isolation of high-quality RNA from tissues with these characteristics, especially for fruit. The common protocols for RNA isolation are tedious and usually result in poor yields when applied to recalcitrant plant tissues. Here an efficient RNA isolation protocol based on cetyltrimethylammonium bromide (CTAB) and two successive precipitations with 10 M lithium chloride (LiCl) was developed specifically for loquat fruits, but it was proved to work efficiently in other tissues of loquat and woody plants. The RNA isolated by this improved protocol was not only of high purity and integrity (A₂₆₀/A₂₈₀ ratios ranged from 1.90 to 2.04 and A₂₆₀/A₂₃₀ ratios were > 2.0) but also of high yield (up to 720 μg on average [coefficient of variation = 21%] total RNA per gram fresh tissue). The protocol was tested on loquat fruit (different stages of development, postharvest, ripening, and bruising), leaf, root, flower, stem, and bud; quince fruit and root; grapevine cells in liquid culture; and rose petals. The RNA obtained with this method is amenable to enzymatic treatments and can be efficiently applied for research on gene characterization, expression, and function.     

Characterization of Saccharomyces cerevisiae Atm1p. Functional studies of an ABC7 type transporter

Saccharomyces cerevisiae Atm1p has been cloned, over-expressed and purified from a yeast expression system. The sequence includes both the soluble ATPase and transmembrane-spanning domains. With the introduction of an N-terminal Kozak sequence and a C-terminal (His)₆-tag, a yield of 1 mg of Atm1p was obtained from 3 g wet yeast cells, which is comparable to other membrane-associated proteins isolated from eukaryotic expression systems. The ATPase activity of Atm1p is sensitive to sodium vanadate, a P-type ATPase inhibitor, with an IC₅₀ of 4 μM. MgADP is a product inhibitor for Atm1p with an IC₅₀ of 0.9 mM. The Michaelis–Menten constants V_max, K_M and k_cat of Atm1p were measured as 8.7 ± 0.3 μM/min, 107 ± 16 μM and 1.24 ± 0.06 min^− 1, respectively. A plot of ATPase activity versus concentration of Atm1p exhibits a nonlinear relationship, suggesting an allosteric response and an important role for the transmembrane domain in mediating both ATP hydrolysis and MgADP release. The metal dependence of Atm1p ATPase activity demonstrated a reactivity order of Mg²⁺ > Mn²⁺ > Co²⁺, while each divalent ion was found to be inhibitory at higher concentrations. The activation and inhibitory effect of phospholipids suggest that formation of a lipid–micelle complex is important for enzymatic activity and stability. Structural analysis of Atm1p by CD spectroscopy suggested a similarity of secondary structure to that found for other members of this ABC protein family.     

Enhancing alfalfa conversion efficiencies for sugar recovery and ethanol production by altering lignin composition

Alfalfa (Medicago sativa L.) biomass was evaluated for biochemical conversion into ethanol using dilute-acid and ammonia pretreatments. The two alfalfa lines compared were a reduced S-lignin transgenic cultivar generated through down regulation of the caffeic acid O-methyltransferase gene and a wild-type control. Both were harvested at two maturities. All the samples had similar carbohydrate contents including a mean composition of 316 g glucan and 497 g total neutral carbohydrates per kg dry biomass, which corresponds to a theoretic ethanol yield of 382 l/ton. Ethanol yields for alfalfa stems pretreated with dilute-acid were significantly impacted by harvest maturity and lignin composition, whereas when pretreated with dilute-ammonia, yield was solely affected by lignin composition. Use of a recombinant xylose-fermenting Saccharomyces strain, for converting the ammonia pretreated alfalfa samples, further increased ethanol yields. Ethanol yields for the xylose-fermenting yeast were 232-278 l/ton and were significantly enhanced for the reduced S lignin cultivars.     

An automated method for regular productions of copper-64 for PET radiopharmaceuticals

To facilitate the development of PET radiopharmaceuticals labelled with the positron-emitting radioisotope copper-64 (t_1/2 = 12.7 h) we have developed a fully automated method for its regular productions. Using the ⁶⁴Ni(p,n)⁶⁴Cu nuclear reaction applied on a 16.5 MeV PETtrace cyclotron the radioisotope is generated in good yields (up to 2 GBq at end-of-synthesis) within 4 h irradiations on nickel-64 (99.6% enrichment) plated onto a gold disk. Based on ion exchange chromatography an automated method has been devised for efficient extraction of the copper-64 in good radionuclide and chemical purity, with ICP-OES analysis determining the concentration of the copper to be 0.14-1.5 ppm. The specific radioactivities of the copper-64 at end-of-synthesis were calculated to be 9.62-77 GB/μmol. The copper-64 radioisotope obtained from this method was then applied to the radiosynthesis of the hypoxia markers, ⁶⁴Cu-ATSM and ⁶⁴Cu-ATSE, which were obtained in good radiochemical yields of >95%.