Land‐use effects on the functional distinctness of arthropod communities

Land‐use change is a major driver of the global loss of biodiversity, but it is unclear to what extent this also results in a loss of ecological traits. Therefore, a better understanding of how land‐use change affects ecological traits is crucial for efforts to sustain functional diversity. To this end we tested whether higher species richness or taxonomic distinctness generally leads to increased functional distinctness and whether intensive land use leads to functionally more narrow arthropod communities. We compiled species composition and trait data for 350 species of terrestrial arthropods (Araneae, Carabidae and Heteroptera) in different land‐use types (forests, grasslands and arable fields) of low and high land‐use intensity. We calculated the average functional and taxonomic distinctness and the rarified trait richness for each community. These measures reflect the range of traits, taxonomic relatedness and number of traits that are observed in local communities. Average functional distinctness only increased significantly with species richness in Carabidae communities. Functional distinctness increased significantly with taxonomic distinctness in communities of all analyzed taxa suggesting a high functional redundancy of taxonomically closely related species. Araneae and Heteroptera communities had the expected lower functional distinctness at sites with higher land‐use intensity. More frequently disturbed land‐use types such as managed grasslands or arable fields were characterized by species with smaller body sizes and higher dispersal abilities and communities with lower functional distinctness or trait richness. Simple recommendations about the conservation of functional distinctness of arthropod communities in the face of future land‐use intensification and species loss are not possible. Our study shows that these relationships depend on the studied taxa and land‐use type. However, for some arthropod groups functional distinctness is threatened by intensification and conversion from less to more frequently disturbed land‐uses.     

How,and how much,natural cover loss increases species richness

Aim The species–area relationship has been applied in the conservation context to predict monotonic species richness declines as natural area is converted to human‐dominated land covers. However, some conversion of natural cover could introduce new habitat types and allow new open habitat species to occur. Moreover, decelerating richness–area relationships suggest that, as natural area is converted to human‐dominated covers, more species will be added to the rare habitat than are lost from the common one. Area effects and increased habitat diversity could each lead to a peaked relationship between species richness and the relative amount of natural area. The purpose of this study is to quantify the effect on avian species richness of conversion of natural area to human‐dominated land cover. Location Ontario, Canada. Methods We evaluated the responses of total avian richness, forest bird richness and open habitat bird richness to remaining natural area within 993 quadrats, each of 100 km². We quantified the amount of natural land cover and land‐cover heterogeneity using remote sensing data. We used structural equation modelling (SEM) to disentangle the relationships among avian richness, natural area and land‐cover heterogeneity. Results Spatial variation in avian richness was a peaked function of remaining natural area, such that losses of up to 44% of the natural area increased avian richness. This partly reflects increased variety of land cover; however, SEM suggests that much of the increase in richness is due to pure area effects. Richness of forest species declined by two species over this range of natural cover loss while open habitat bird richness increased by approximately 20 species. The effect of natural area on species richness is consistent with the sum of species–area curves for natural habitat species and human‐dominated habitat species. Main conclusions At least in northern temperate forests, almost half of the natural land cover can be converted to human‐dominated forms before avian richness declines. Conversion of < 50% of regional natural area to human‐dominated land cover can benefit open‐area species richness with relatively few losses of forest obligate species. However, with > 50% natural area conversion, species begin to drop out of regional assemblages.     

Shifts in the demographics and behavior of bearded pigs (Sus barbatus) across a land‐use gradient

Beyond broad‐scale investigations of species diversity and abundance, there is little information on how land conversion in the tropics is affecting the behavior and demographics of surviving species. To fill these knowledge gaps, we explored the effects of land‐use change on the ecologically important and threatened bearded pig (Sus barbatus) over seven years in Borneo. Random placement of camera traps across a land‐use gradient of primary forest, logged forest, and oil palm plantations (32,542 trap nights) resulted in 2,303 independent capture events. Land‐use was associated with changes in the age structure and activity patterns of photographed individuals, alongside large changes in abundance shown previously. The proportion of adults recorded declined from 92% in primary forests to 76% in logged forests, and 67% in plantations, likely indicating increased fecundity in secondary forests. Activity level (capture rate) did not vary, but activity patterns changed markedly, from diurnal in primary forests, crepuscular in logged forests, to nocturnal in plantations. These changes corresponded with avoidance of diurnal human activity and may also protect bearded pigs from increased thermal stress in warmer degraded forests. The percentage of adult captures that were groups rather than individuals increased five‐fold from primary forests (4%) to logged forests (20%), possibly due to increased mating or in response to perceived threats from indirect human disturbance. We recommend further investigation of the demographic and behavioral effects of land‐use change on keystone species as altered population structure, activity patterns, and social behavior may have knock‐on effects for entire ecosystems.     

High evolutionary and functional distinctiveness of endemic monocots in world islands

Functionally and evolutionarily distinct species have traits or an evolutionary history that are shared by few others in a given set, which make them priority species for biodiversity conservation. On islands, life in isolation has led to the evolution of many distinct forms and functions as well as to a high level of endemism. The aim of this study is to assess the evolutionary and functional distinctiveness of insular monocotyledons and their distribution across 126 islands worldwide. We show that evolutionary and functional distinctiveness are decoupled but that both are higher on islands than on continental areas. Anagenesis on islands followed by extinctions and/or diversification on the mainland may have led to highly evolutionarily distinct species while functionally distinct species may have arisen from ecological niche shift or niche expansion. Insular endemic species with high evolutionary distinctiveness but not with high functional distinctiveness are significantly range-restricted compared to less distinct species, possibly indicating differences in dispersal potential. By showing that distinctiveness is high on islands and that the most distinct species are range-restricted, our study has important conservation implications. Indeed, islands are among the most threatened systems of the world, and extinctions of the most distinct species could lead to significant loss of phylogenetic and functional diversity.

     

Evolution of host- and habitat association in the wood-feeding cockroach, Cryptocercus

Members of the cockroach genus Cryptocercus are subsocial insects that live in temperate forests and feed on decomposing logs. At present, seven species are recognized worldwide: four in the eastern USA, one in the western USA, and one each in Russia and China. Genetic variation within and among the Nearctic species has been characterized extensively in previous studies. However, whether there has been a corresponding divergence in the host and habitat association of Cryptocercus species is not known. Here, we report on differences in host and habitat association among six of the seven Cryptocercus species, estimated from field observations, elevation data, and land cover data. Our results indicated that the eastern and western USA species differ from one another in their distribution patterns, abundance, and habitat association. The eastern USA species are associated largely with deciduous forests, whereas the western USA and the Russian species are associated with evergreen forests. Thus, the eastern USA species, which are evolutionarily the most recent ones, have adapted to a different set of tree species relative to the basal species. There were also differences in the habitat association of the various species. Specifically, in the eastern USA, Cryptocercus darwini , evolutionarily the most recent species, occupied a habitat that is predominantly at low elevation [<400 m above sea level (ASL)] while all the other Nearctic species and the Russian species occupied a habitat that is at relatively higher elevations (>400 m ASL). Mapping of the above traits on a phylogenetic tree revealed that the evolutionary trend in Cryptocercus with regard to host and habitat association has been toward the utilization of low elevation habitats dominated by deciduous forests. © 2002 The Linnean Society of London, Biological Journal of the Linnean Society , 2002, 75 , 163–172.     

Global amphibian declines: sorting the hypotheses

Abstract. Reports of malformed amphibians and global amphibian declines have led to public concern, particularly because amphibians are thought to be indicator species of overall environmental health. The topic also draws scientific attention because there is no obvious, simple answer to the question of what is causing amphibian declines? Complex interactions of several anthropogenic factors are probably at work, and understanding amphibian declines may thus serve as a model for understanding species declines in general. While we have fewer answers than we would like, there are six leading hypotheses that we sort into two classes. For class I hypotheses, alien species, over‐exploitation and land use change, we have a good understanding of the ecological mechanisms underlying declines; these causes have affected amphibian populations negatively for more than a century. However, the question remains as to whether the magnitude of these negative effects increased in the 1980s, as scientists began to notice a global decline of amphibians. Further, remedies for these problems are not simple. For class II hypotheses, global change (including UV radiation and global climate change), contaminants and emerging infectious diseases we have a poor, but improving understanding of how each might cause declines. Class II factors involve complex and subtle mechanistic underpinnings, with probable interactions among multiple ecological and evolutionary variables. They may also interact with class I hypotheses. Suspected mechanisms associated with class II hypotheses are relatively recent, dating from at least the middle of the 20th century. Did these causes act independently or in concert with pre‐existing negative forces of class I hypotheses to increase the rate of amphibian declines to a level that drew global attention? We need more studies that connect the suspected mechanisms underlying both classes of hypotheses with quantitative changes in amphibian population sizes and species numbers. An important step forward in this task is clarifying the hypotheses and conditions under which the various causes operate alone or together.     

Role of plant functional traits in determining vegetation composition of abandoned grazing land in north‐eastern Victoria,Australia

Question: In the Northern Hemisphere, species with dispersal limitations are typically absent from secondary forests. In Australia, little is known about dispersal mechanisms and other traits that drive species composition within post‐agricultural, secondary forest. We asked whether mode of seed dispersal, nutrient uptake strategy, fire response, and life form in extant vegetation differ according to land‐use history. We also asked whether functional traits of Australian species that confer tolerance to grazing and re‐colonisation potential differ from those in the Northern Hemisphere. Location: Delatite Peninsula, NE Victoria, Australia. Methods: The vegetation of primary and secondary forests was surveyed using a paired‐plot design. Eight traits were measured for all species recorded. ANOSIM tests and Non‐metric Multi‐dimensional Scaling were used to test differences in the abundance of plant attributes between land‐use types. Results: Land‐use history had a significant effect on vegetation composition. Specific leaf area (SLA) proved to be the best predictor of response to land‐use change. Primary forest species were typically myrmecochorous phanerophytes with low SLA. In the secondary forest, species were typically therophytes with epizoochorous dispersal and high SLA. Conclusions: The attributes of species in secondary forests provide tolerance to grazing suggesting that disturbance caused by past grazing activity determined the composition of these forests. Myrmecochores were rare in secondary forests, suggesting that species had failed to re‐colonise due to dispersal limitations. Functional traits that resulted in species loss through disturbance and prevented re‐colonisation were different to those in the Northern Hemisphere and were attributable to the sclerophyllous nature of the primary forest.     

Phylogenetic dimension of tree communities reveals high conservation value of disturbed tropical rain forests

Aim

The conversion of old‐growth tropical forests into human‐modified landscapes threatens biodiversity worldwide, but its impact on the phylogenetic dimension of remaining communities is still poorly known. Negative and neutral responses of tree phylogenetic diversity to land use change have been reported at local and landscape scales. Here, we hypothesized that such variable responses to disturbance depend on the regional context, being stronger in more degraded rain forest regions with a longer history of land use.

Location

Six regions in Mexico and Brazil.

Methods

We used a large vegetation database (6,923 trees from 686 species) recorded in 98 50‐ha landscapes distributed across two Brazilian and four Mexican regions, which exhibit different degrees of disturbance. In each region, we assessed whether phylogenetic alpha and beta diversities were related to landscape‐scale forest loss, the percentage of shade‐intolerant species (a proxy of local disturbance) and/or the relatedness of decreasing (losers) and increasing (winners) taxa.

Results

Contrary to our expectations, the percentage of forest cover and shade‐intolerant species were weakly related to phylogenetic alpha and beta diversities in all but one region. Loser species were generally as dispersed across the phylogeny as winner species, allowing more degraded, deforested and species‐poorer forests to sustain relatively high levels of evolutionary (phylogenetic) diversity.

Main conclusion

Our findings support previous evidence indicating that traits related to high susceptibility to forest disturbances are convergent or have low phylogenetic signal. More importantly, they reveal that the evolutionary value of disturbed forests is (at least in a phylogenetic sense) much greater than previously thought.

     

Annual temperature variation influences the vulnerability of montane bird communities to land‐use change

Understanding how and why species respond to land‐use change is one of the central challenges in conservation biology, yet the causes of variation in the responses of species to land‐use change remain unclear. We tested whether adaptation to different abiotic environments influenced the vulnerability of bird communities to agricultural expansion in the Himalayan mountain range, which exhibits a strong east–west gradient in annual temperature variation. We did so by surveying bird communities in forest and agriculture at opposite ends of that gradient. We contrasted metrics of species richness, diversity, community composition and forest dependency across land‐use types and regions, and tested whether species’ thermal sensitivity influenced their response to the replacement of forest with agriculture. Agricultural land in the relatively aseasonal east harboured significantly fewer bird species than did forests, a pattern that is starkly reversed in the highly seasonal west. For species common to both regions, eastern populations used forest ~35% more than did western populations. While western species were less constrained by temperature than eastern species, western species with narrow thermal tolerances were also more forest dependent. Selection across a stark environmental gradient on a common species pool appears to have altered the vulnerability of Himalayan birds to forest loss, with communities in the relatively aseasonal east much more sensitive to forest conversion than those in the west. Adaptation to local environmental conditions appears to mediate species’ responses to land use change, with thermal specialists more vulnerable to forest loss than species with greater thermal tolerances. Species’ responses to global change may differ predictably along abiotic gradients even within a single region or biodiversity hotspot, and such variation must be addressed in conservation planning.     

A Global Trend towards the Loss of Evolutionarily Unique Species in Mangrove Ecosystems

The mangrove biome stands out as a distinct forest type at the interface between terrestrial, estuarine, and near-shore marine ecosystems. However, mangrove species are increasingly threatened and experiencing range contraction across the globe that requires urgent conservation action. Here, we assess the spatial distribution of mangrove species richness and evolutionary diversity, and evaluate potential predictors of global declines and risk of extinction. We found that human pressure, measured as the number of different uses associated with mangroves, correlated strongly, but negatively, with extinction probability, whereas species ages were the best predictor of global decline, explaining 15% of variation in extinction risk. Although the majority of mangrove species are categorised by the IUCN as Least Concern, our finding that the more threatened species also tend to be those that are more evolutionarily unique is of concern because their extinction would result in a greater loss of phylogenetic diversity. Finally, we identified biogeographic regions that are relatively species-poor but rich in evolutionary history, and suggest these regions deserve greater conservation priority. Our study provides phylogenetic information that is important for developing a unified management plan for mangrove ecosystems worldwide.     

Birds in the matrix: the role of agriculture in avian conservation in the Taita Hills,Kenya

Agricultural conversion of tropical forests is a major driver of biodiversity loss. Slowing rates of deforestation is a conservation priority, but it is also useful to consider how species diversity is retained across the agricultural matrix. Here, we assess how bird diversity varies in relation to land use in the Taita Hills, Kenya. We used point counts to survey birds along a land‐use gradient that included primary forest, secondary vegetation, agroforest, timber plantation and cropland. We found that the agricultural matrix supports an abundant and diverse bird community with high levels of species turnover, but that forest specialists are confined predominantly to primary forest, with the matrix dominated by forest visitors. Ordination analyses showed that representation of forest specialists decreases with distance from primary forest. With the exception of forest generalists, bird abundance and diversity are lowest in timber plantations. Contrary to expectation, we found feeding guilds at similar abundances in all land‐use types. We conclude that whilst the agricultural matrix, and agroforest in particular, makes a strong contribution to observed bird diversity at the landscape scale, intact primary forest is essential for maintaining this diversity, especially amongst species of conservation concern.     

Historical museum collections clarify the evolutionary history of cryptic species radiation in the world's largest amphibians

Inaccurate taxonomic assessment of threatened populations can hinder conservation prioritization and management, with human‐mediated population movements obscuring biogeographic patterns and confounding reconstructions of evolutionary history. Giant salamanders were formerly distributed widely across China, and are interpreted as a single species, Andrias davidianus. Previous phylogenetic studies have identified distinct Chinese giant salamander lineages but were unable to associate these consistently with different landscapes, probably because population structure has been modified by human‐mediated translocations for recent commercial farming. We investigated the evolutionary history and relationships of allopatric Chinese giant salamander populations with Next‐Generation Sequencing methods, using historical museum specimens and late 20th‐century samples, and retrieved partial or near‐complete mitogenomes for 17 individuals. Samples from populations unlikely to have been affected by translocations form three clades from separate regions of China, spatially congruent with isolation by either major river drainages or mountain ranges. Pliocene–Pleistocene divergences for these clades are consistent with topographic modification of southern China associated with uplift of the Qinghai‐Tibet Plateau. General Mixed Yule Coalescent model analysis indicates that these clades represent separate species: Andrias davidianus (Blanchard, 1871) (northern Yangtze/Sichuan), Andrias sligoi (Boulenger, 1924) (Pearl/Nanling), and an undescribed species (Huangshan). Andrias sligoi is possibly the world's largest amphibian. Inclusion of additional reportedly wild samples from areas of known giant salamander exploitation and movement leads to increasing loss of biogeographic signal. Wild Chinese giant salamander populations are now critically depleted or extirpated, and conservation actions should be updated to recognize the existence of multiple species.     

High Bird Species Diversity in Structurally Heterogeneous Farmland in Western Kenya

Tropical ecosystems are globally important for bird diversity. In many tropical regions, land‐use intensification has caused conversion of natural forests into human‐modified habitats, such as secondary forests and heterogeneous agricultural landscapes. Despite previous research, the distribution of bird communities in these forest‐farmland mosaics is not well understood. To achieve a comprehensive understanding of bird diversity and community turnover in a human‐modified Kenyan landscape, we recorded bird communities at 20 sites covering the complete habitat gradient from forest (near natural forest, secondary forest) to farmland (subsistence farmland, sugarcane plantation) using point counts and distance sampling. Bird density and species richness were on average higher in farmland than in forest habitats. Within forest and farmland, bird density and species richness increased with vegetation structural diversity, i.e., were higher in near natural than in secondary forest and in subsistence farmland than in sugarcane plantations. Bird communities in forest and farmland habitats were very distinct and very few forest specialists occurred in farmland habitats. Moreover, insectivorous bird species declined in farmland habitats whereas carnivores and herbivores increased. Our study confirms that tropical farmlands can hardly accommodate forest specialist species. Contrary to most previous studies, our findings show that structurally rich tropical farmlands hold a surprisingly rich and distinct bird community that is threatened by conversion of subsistence farmland into sugarcane plantations. We conclude that conservation strategies in the tropics must go beyond rain forest protection and should integrate structurally heterogeneous agroecosystems into conservation plans that aim at maintaining the diverse bird communities of tropical forest‐farmland mosaics.     

Comparative responses of termite functional and taxonomic diversity to land‐use change

1. While it is clear that land‐use change significantly impacts the taxonomic dimension of soil biodiversity, how the functional dimension responds to land‐use change is less well understood. 2. This study examined how the transformation of primary forests into rubber tree monocultures impacts individual termite species and how this change is reflected in termite taxonomic and functional α‐diversity (within site) and β‐diversity (among sites). 3. Overall, individual species responded strongly to land‐use change, whereby only 11 of the 27 species found were able to tolerate both habitats. These differences caused a 27% reduction in termite taxonomic richness and reduced taxonomic β‐diversity in rubber plantations compared with primary forests. The study also revealed that the forest conversion led to a shift in some termite species with smaller body size, shorter legs and smaller mandibular traits. Primary forests exhibited higher functional richness and functional β‐diversity of termite species, indicating that functional traits of termite species in rubber plantations are more evenly distributed. 4. The present study suggests that forest conversion does not merely decrease taxonomic diversity of termites, but also exerts functional trait filtering within some termite species. The results affirm the need for biodiversity assessments that combine taxonomic and functional indicators when monitoring the impact of land‐use change.     

Phylogenetically-informed priorities for amphibian conservation

The amphibian decline and extinction crisis demands urgent action to prevent further large numbers of species extinctions. Lists of priority species for conservation, based on a combination of species' threat status and unique contribution to phylogenetic diversity, are one tool for the direction and catalyzation of conservation action. We describe the construction of a near-complete species-level phylogeny of 5713 amphibian species, which we use to create a list of evolutionarily distinct and globally endangered species (EDGE list) for the entire class Amphibia. We present sensitivity analyses to test the robustness of our priority list to uncertainty in species' phylogenetic position and threat status. We find that both sources of uncertainty have only minor impacts on our 'top 100' list of priority species, indicating the robustness of the approach. By contrast, our analyses suggest that a large number of Data Deficient species are likely to be high priorities for conservation action from the perspective of their contribution to the evolutionary history.     

A pantropical analysis of the impacts of forest degradation and conversion on local temperature

Temperature is a core component of a species' fundamental niche. At the fine scale over which most organisms experience climate (mm to ha), temperature depends upon the amount of radiation reaching the Earth's surface, which is principally governed by vegetation. Tropical regions have undergone widespread and extreme changes to vegetation, particularly through the degradation and conversion of rainforests. As most terrestrial biodiversity is in the tropics, and many of these species possess narrow thermal limits, it is important to identify local thermal impacts of rainforest degradation and conversion. We collected pantropical, site‐level (<1 ha) temperature data from the literature to quantify impacts of land‐use change on local temperatures, and to examine whether this relationship differed aboveground relative to belowground and between wet and dry seasons. We found that local temperature in our sample sites was higher than primary forest in all human‐impacted land‐use types (N = 113,894 daytime temperature measurements from 25 studies). Warming was pronounced following conversion of forest to agricultural land (minimum +1.6°C, maximum +13.6°C), but minimal and nonsignificant when compared to forest degradation (e.g., by selective logging; minimum +1°C, maximum +1.1°C). The effect was buffered belowground (minimum buffering 0°C, maximum buffering 11.4°C), whereas seasonality had minimal impact (maximum buffering 1.9°C). We conclude that forest‐dependent species that persist following conversion of rainforest have experienced substantial local warming. Deforestation pushes these species closer to their thermal limits, making it more likely that compounding effects of future perturbations, such as severe droughts and global warming, will exceed species' tolerances. By contrast, degraded forests and belowground habitats may provide important refugia for thermally restricted species in landscapes dominated by agricultural land.     

Mechanistic insights into landscape genetic structure of two tropical amphibians using field‐derived resistance surfaces

Conversion of forests to agriculture often fragments distributions of forest species and can disrupt gene flow. We examined effects of prevalent land uses on genetic connectivity of two amphibian species in northeastern Costa Rica. We incorporated data from field surveys and experiments to develop resistance surfaces that represent local mechanisms hypothesized to modify dispersal success of amphibians, such as habitat‐specific predation and desiccation risk. Because time lags can exist between forest conversion and genetic responses, we evaluated landscape effects using land‐cover data from different time periods. Populations of both species were structured at similar spatial scales but exhibited differing responses to landscape features. Litter frog population differentiation was significantly related to landscape resistances estimated from abundance and experiment data. Model support was highest for experiment‐derived surfaces that represented responses to microclimate variation. Litter frog genetic variation was best explained by contemporary landscape configuration, indicating rapid population response to land‐use change. Poison frog genetic structure was strongly associated with geographic isolation, which explained up to 45% of genetic variation, and long‐standing barriers, such as rivers and mountains. However, there was also partial support for abundance‐ and microclimate response‐derived resistances. Differences in species responses to landscape features may be explained by overriding effects of population size on patterns of differentiation for poison frogs, but not litter frogs. In addition, pastures are likely semi‐permeable to poison frog gene flow because the species is known to use pastures when remnant vegetation is present, but litter frogs do not. Ongoing reforestation efforts will probably increase connectivity in the region by increasing tree cover and reducing area of pastures.     

Species pools in cultural landscapes – niche construction,ecological opportunity and niche shifts

This paper discusses the ecology of species that were favoured by the development of the cultural landscape in central and NW Europe beginning in the Neolithic and the Bronze Age, with a focus on mechanisms behind species responses to this landscape transformation. A fraction of species may have maintained their realized niches from the pre‐ agricultural landscape and utilized similar niches created by the landscape transformation. However, I suggest that many species responded by altering their niche relationships, and a conceptual model is proposed for this response, based on niche construction, ecological opportunity and niche shifts. Human‐mediated niche construction, associated with clearing of forests and creation of pastures and fields promoted niche shifts towards open habitats, and species exploited the ecological opportunity provided by these created environments. This process was initially purely ecological, i.e. the new habitats must have been included in the original fundamental niche of the species. Two other features of human‐mediated niche construction, increased interconnectivity and increased spatial stability of open habitats, resulted in species accumulating in the habitats of the constructed landscape. As a consequence, selection processes were initiated favouring traits promoting fitness in the constructed landscape. This process implied a feed‐back to niche shifts, but now also including evolutionary changes in fundamental niches. I briefly discuss whether this model can be applied also to present‐day anthropogenic impact on landscapes. A general conclusion is that ecological and evolutionary changes in species niches should be more explicitly considered in modeling and predictions of species response to present‐day landscape and land‐use changes.     

Land use and biodiversity patterns of the herpetofauna: The role of olive groves

The intensification of agriculture has significant environmental consequences. This intensification entails the simplification and homogenisation of the landscape, which leads to strong negative impacts at ecosystem level, including declines in animal biodiversity. The purpose of this study was to assess the effect of different land uses on reptilian and amphibian biodiversity patterns at a regional scale by analysing a large database on the presence of amphibians and reptiles in Andalusia (southern Spain). GIS techniques and the Ecological-Niche Factor Analysis (ENFA) were applied in order to assess whether the habitat was suitable for each reptilian and amphibian species, when the land use variables were excluded. The incongruence between the potential and the observed species richness was then correlated with the main types of land use in Andalusia. Our results showed that irrigated and unirrigated olive groves were associated with a biodiversity deficit of amphibians and reptiles respectively, whereas natural forests and pastures, along with more heterogeneous crops areas, were more suitable. A clustering analysis showed that generalist species were related to olive groves whereas rare and specialist species were related to land uses related to natural vegetation. In summary, our results indicate that large areas covered by olives groves harbour less amphibian and reptilian diversity, thus suggesting that agro-environmental schemes should be carried to promote the species richness in these crops.