Substantial labile carbon stocks and microbial activity in deeply weathered soils below a tropical wet forest

Contrary to large areas in Amazonia of tropical moist forests with a pronounced dry season, tropical wet forests in Costa Rica do not depend on deep roots to maintain an evergreen forest canopy through the year. At our Costa Rican tropical wet forest sites, we found a large carbon stock in the subsoil of deeply weathered Oxisols, even though only 0.04–0.2% of the measured root biomass (>2 mm diameter) to 3 m depth was below 2 m. In addition, we demonstrate that 20% or more of this deep soil carbon (depending on soil type) can be mobilized after forest clearing for pasture establishment. Microbial activity between 0.3 and 3 m depth contributed about 50% to the microbial activity in these soils, confirming the importance of the subsoil in C cycling. Depending on soil type, forest clearing for pasture establishment led from no change to a slight addition of carbon in the topsoil (0–0.3 m depth). However, this effect was countered by a substantial loss of C stocks in the subsoil (1–3 m depth). Our results show that large stocks of relatively labile carbon are not limited to areas with a prolonged dry season, but can also be found in deeply weathered soils below tropical wet forests. Forest clearing in such areas may produce unexpectedly high C losses from the subsoil.     

Tropical forest composition and function across space and time: Insights from diverse gradients in Área de Conservación Guanacaste

Environmental gradients have played a pivotal role in the history and development of plant ecology and are useful for testing ecological and evolutionary theory. Área de Conservación Guanacaste is a spatio-temporal mosaic of forests that have evolved continuously across elevation, topography, soil types, succession, and annual and inter-annual climatic change. Studies of plant ecology across diverse gradients of ACG have shaped functional ecology, successional theory, community assembly, plant–herbivore interactions, among many other fields. In this review, we synthesize the, perhaps overlooked, role plant ecological studies of ACG have had on our understanding of tropical forest dynamics. We outline present-day processes that will have major impacts on forest dynamics of ACG in the future and highlight how ACG will continue to shape future research priorities in plant ecology.     

Species Richness,Spatial Variation,and Abundance of the Soil Seed Bank of a Secondary Tropical Rain Forest1

Despite the importance of the soil seed bank in tropical forest regeneration, little is known about spatial variability in species composition and abundance of seeds stored in the soil. To develop sampling methods for comparative studies, we examined species richness, spatial variation, and abundance of germinants from the soil seed bank in a 16 year old secondary, tropical wet forest at La Selva Biological Station, Costa Rica. Surface soil (10 cm deep, 4.7 cm diameter) was collected at the intersection points of a gridded 1 ha plot (10 × 10-m grid, 121 samples) and in a nested 100 m² subplot (2 × 2-m grid, 36 samples). The 1 ha plot had a density of 4535 seeds/m² with 34 species observed. Based on a series of 100 randomized species accumulation curves, a Michaelis-Menten fit predicted a mean species richness of 36.3 species; the number of observed species was close to the predicted asymptote. A nonparametric, first-order jackknife species richness estimator predicted a species richness of 37.0 species. Eighty-five and 95 percent of the observed species richness is contained, on average, within 41 and 74 pooled samples, respectively. Within the 100 m² nested subplot, a density of 5476 seeds/m² was observed, comprising 26 species with an estimated species richness (Michaelis-Menten fit) of 29.1 species. The jackknife species richness estimator predicted a species richness of 36.7 species. For species richness and abundance of both plots, spatial autocorrelation statistics (Moran's I) were not significantly different from zero at lag distances from 2 to 100 m, indicating a random distribution at these spatial scales. For this site, accurate estimates of species composition depend upon the number of samples collected as well as the spatial distribution of sampling effort. Many small samples distributed over a large area provide greater accuracy and precision for estimating species richness of the soil seed bank.     

Relationships between deforestation, riparian forest buffers and benthic macroinvertebrates in neotropical headwater streams

1. Few studies have evaluated the effectiveness of riparian buffers in the tropics, despite their potential to reduce the impacts of deforestation on stream communities. We examined macroinvertebrate assemblages and stream habitat characteristics in small lowland streams in southeastern Costa Rica to assess the impacts of deforestation on benthic communities and the influence of riparian forest buffers on these effects. Three different stream reach types were compared in the study: (i) forested reference reaches, (ii) stream reaches adjacent to pasture with a riparian forest buffer at least 15 m in width on both banks and (iii) stream reaches adjacent to pasture without a riparian forest buffer. 2. Comparisons between forest and pasture reaches suggest that deforestation, even at a very local scale, can alter the taxonomic composition of benthic macroinvertebrate assemblages, reduce macroinvertebrate diversity and eliminate the most sensitive taxa. The presence of a riparian forest buffer appeared to significantly reduce the effects of deforestation on benthic communities, as macroinvertebrate diversity and assemblage structure in forest buffer reaches were generally very similar to those in forested reference reaches. One forest buffer reach was clearly an exception to this pattern, despite the presence of a wide riparian buffer. 3. The taxonomic structure of macroinvertebrate assemblages differed between pool and riffle habitats, but contrasts among the three reach types in our study were consistent across the two habitats. Differences among reach types also persisted across three sampling periods during our 15‐month study. 4. Among the environmental variables we measured, only stream water temperature varied significantly among reach types, but trends in periphyton abundance and stream sedimentation may have contributed to observed differences in macroinvertebrate assemblage structure. 5. Forest cover was high in all of our study catchments, and more research is needed to determine whether riparian forest buffers will sustain similar functions in more extensively deforested landscapes. Nevertheless, our results provide support for Costa Rican regulations protecting riparian forests and suggest that proper riparian management could significantly reduce the impacts of deforestation on benthic communities in tropical streams.     

Factors Limiting Tropical Rain Forest Regeneration in Abandoned Pasture: Seed Rain,Seed Germination,Microclimate, and Soil1

Vegetation, seed rain, seed germination, microclimate, and soil physical and chemical parameters were measured in a recently abandoned pasture and adjacent primary rain forest in southern Costa Rica. The goal of this study was to assess the importance of these factors in limiting forest regeneration in abandoned pastures. Seed rain of animal dispersed species decreased dramatically in the pasture >5 m from the forest/pasture edge; fewer wind dispersed seeds fell in the pasture than in the forest, but the difference was much less than for animal dispersed seeds. Percent seed germination of most species studied was similar in the forest and in pasture with grasses; seed germination was lower during the dry season in areas of pasture cleared of grasses. Air temperature, vapor pressure deficit (VPD), and photon flux density (PFD) were much higher in the pasture than in the forest at 1 m above the ground. VPD and PFD at ground level and soil temperature were similar in the pasture and the forest, indicating that pasture grasses strongly modify microclimatic conditions near the soil surface. The lowest gravimetric water content recorded in the pasture during the dry season was 0.5 and leaf relative water contents of the two species measured in the forest and pasture were identical, suggesting that plants in the pasture were not water stressed. Levels of most soil nutrients were lower in the pasture as compared to the forest; however, aboveground and root biomass for seedlings grown in pasture and forest soils did not differ significantly. Although a number of factors impede forest recovery in abandoned pastures, these results suggest that the most imporrant limitation is lack of seed dispersal.     

Population structure and genetic diversity in four tropical tree species in Costa Rica

Despite intensified interest in conservation of tropical forests, knowledge of the population genetics of tropical forest trees remains limited. We used random amplified polymorphic DNA (RAPD) data to evaluate trends in genetic diversity and differentiation for four tropical tree species, Alchornea latifolia, Dendropanax arboreus, Inga thibaudiana and Protium glabrum . These species occur at contrasting population densities along an elevational gradient and we use RAPD and ecological data to examine natural levels of genetic diversity of each species, trends in genetic variability with population density and structure, genetic differentiation along the elevation gradient, and the relationship between genetic diversity and such factors as seed dispersal and pollination syndrome. At the distances we examined (plot distances ranging from 0.8 to 8.6 km) there was very little genetic structuring at any distance along the gradient. All four species exhibited levels of variation expected for spatial distribution, mating system and pollinator syndrome; greater than 96% of the genetic variation occurred within plots for Inga thibaudiana, Protium glabrum and Dendropanax arboreus. Alchornea latifolia only occurred in a single plot. The results of this study contribute to a growing database of genetic diversity data that can be utilized to make predictions about the effect of disturbance and subsequent reductions in population size on genetic variation and structure in tropical tree species.