The relative of species pools in determining plant species richness: an alternative explanation of species coexistence?

Explanations of the pattern of species have traditionally relied on small-scale, local processes occurring in ecological time. Differences in species richness have associated with different mechanisms avoiding competition, such as spatiotemporal heterogeneity (weaker competitors may find a more favourable place or time) or environmental stress (competition is assumed to be less intensive under difficult conditions). More recently, large-scale process have been taken into account, raising such questions as: which plant species may potentially grow in a certain community? Are evolutionary processes and species dispersal responsible for the differences between communities? The species-pool theory attempts to answer these general questions, and information about species pools is needed for the design of experiments where the number of species in a community is manipulated.     

How many species of host-specific insects feed on a species of tropical tree?

The assumptions on the host specificity of beetles that led Terry Erwin to suggest that there may be over 30 million arthropod species were tested for 10 species of trees and their insect associates at a rainforest site in Papua New Guinea. The data included 391 species and 4696 individuals of herbivorous beetles collected during a one year period using hand collecting, beating, branch clipping, intercept flight traps and pyrethrum knockdown. Insect host specificity was assessed by feeding trials in captivity. The data suggest that between 23 and 37 monophagous leaf-feeding species are most likely to be present in this system, whereas Erwin's method yields an estimate of 138 monophagous species. The major factors responsible for the discrepancy between our observations and Erwin's assumptions appears to be (a) the importance of transient species; (b) the insect fauna that is shared among tree species; (c) some generalist wood-eating species may inflate the apparent species richness of leaf-feeding beetles; and (d) the proportion of specialist species varies significantly among tree species. We conclude that studies reporting the proportion of specialist insect herbivores associated with particular tropical tree species will yield only a portion of the information needed to estimate global arthropod species richness, but may be useful for elucidating certain aspects of food-web ecology in tropical rain forests.     

Are all Mexican odonate species documented? An assessment of species richness

With the aim of protecting Mexican diversity, one current governmental task is to complete national biological inventories. In the case of odonate insects, several researchers have hypothesized that species richness is complete (205 dragonflies and 151 damselflies), but there has not been any formal exercise to test this. Thus, we have investigated whether odonate species richness (for Mexican endemics, dragonflies (suborder Anisoptera), damselflies (suborder Zygoptera) and total species) is complete using sample-based and coverage-based rarefaction curves. Along with this, we also showed how good distribution data are in the country. The rarefaction curves have indicated 100% completeness for all groups suggesting that the inventory is complete. However, species' distribution data is highly patchy regarding areas either well (e.g. central Mexico) or badly (e.g. coast of Guerrero and Oaxaca) collected. We encourage researchers to continue odonate sampling in order to support at least three conservation actions: (i) conservation assessment of endangered species; (ii) knowledge of range shifts given rising global temperatures; and (iii) increase public interest and awareness in protected, touristic areas.     

Recent records of steppe species in Belarus,first indications of a steppe species invasion?

BELARUS IS SITUATED AT A CROSSROAD OF NATURAL BORDERS OF SPECIES DISTRIBUTIONS: the NE part is situated in a taiga zone, whereas the other part of terrain is in the European forest zone. The distance of Belarus to the steppe zone is about 330 kilometers. This geographical position and the extensive knowledge of its fauna can be used to monitor changes in the distribution of different species. An intensive study of open habitat ground beetles was carried out from 1975-2008 in Belarus, using pitfall traps, quadrate-sampling methods, hand collecting, netting and light traps. In total, more than 130 000 specimens of ground beetles belonging to 169 species were collected from 62 fields and 11 meadows of different types. 217 specimens of Calosoma investigator (Illiger 1798), 2 specimens of Calosoma denticolle (Gebler 1833), and one specimen of Harpalus subcylindricus (Dejean, 1829), Harpalus honestus (Duftschmid 1812) and Zabrus tenebrioides (Goeze 1777) were present in this material. All specimens were macropterous and exclusively caught at fields and waste grounds on sandy soil. Nowadays Belarus is the northernmost location for these species in Eastern Europe. Steppe species most probably migrated to SE Belarus from NE Ukraine, using Dnieper and its river valleys. The shift in the geographic distribution of steppe species during the last thirty years in Belarus have been attributed to a higher frequency of warmer and wetter summers in the last few decades.     

Effects of exotic-native species relationship on naturalization and invasion of exotic plant species北大核心CSCD

Aims: Darwin's naturalization conundrum describes the paradox that the relationship of exotic species to native residents could either promote or hinder invasion success through opposing mechanisms: niche pre-adaptation or competitive interactions. Previous Darwin's naturalization studies have showed invasion success could vary at stages, sites, and spatial and phylogenetic scales. Our objective was to assess the effects of exotic-native species relationship on invasion process of exotic plant species in China, where related research is still lacking. Methods: Generalized linear mixed models were used to examine relationship between exotic-native species relationship and performance of exotic species at different spatial scale (provincial, municipal and community) and invasion stages (naturalization, dispersal and invasion). At community scale, we measured environmental factors of communities we investigated to control the effect of habitat heterogeneity among them. Important findings: At the provincial and municipal scales, exotic species closely related to native flora were more likely to be naturalized and distributed, which is more consistent with the expectation of the pre-adaptation hypothesis. On the community scale, the exotic-native species relationship was not related to establishment and abundance of exotic species in the community. The results suggested that exotic species did not strongly compete with their close native relatives in communities, but were better adapted to areas where their close relatives had lived. Considering their high potential of naturalization and invasion, special attention should be paid to those exotic species that closely related to the native flora in the management of invasive species. © Editorial Office of Chinese Journal of Plant Ecology. All rights reserved.     

Comparison of the β-lactamases ofBacteroides species

-Lactam antibiotic susceptibility and the presence of -lactamase were examined in clinical strains ofBacteroides species. All strains produced a noninducible, cell-associated cephalosporinase. Based on isoelectric focusing, molecular weight determinations, substrate profiles, and inhibition studies, it was concluded that allBacteroides strains examined produced a very similar, if not identical, -lactamase in terms of these enzymatic and physical characteristics.     

Peptidomics of neurohemal organs from species of the cockroach family Blattidae: how do neuropeptides of closely related species differ?

The primary structures and molecular mass data of neuropeptides that are released from major neuroendocrine sites of the American cockroach, Periplaneta americana, are well known. In the current study we extensively surveyed neuropeptides of the corpora cardiaca, the corpora allata and the abdominal perisympathetic organs, from 14 related cockroach species belonging to the family Blattidae. Mainly, this survey was executed by using mass spectrometric methods (MALDI-TOF MS). Peptides which appeared to be modified, as judged from their mass data and comparison with known data from P. americana, were fragmented by means of the post-source decay technique to determine their amino acid sequence. Single organ preparations sufficed to reveal the peptide pattern in neurohemal organs and to identify species-specific modifications, making it possible to glean information also from tissues of less abundant species that were caught during field trips. The peptide inventory described in this study is very typical of cockroaches of the family Blattidae and clearly separates this taxon from other taxa of cockroaches. The majority of neuropeptides was identical in all investigated species. Some peptides, however, displayed remarkable variations in their sequence which hint to a differential rate of modification among peptides of the same neuropeptide family. These modifications serve to distinguish further relatedness of taxa within the Blattidae.     

Are invasive species drivers of native species decline or passengers of habitat modification? A case study of the impact of the common myna (Acridotheres tristis) on Australian bird species

Habitat modification and invasive species are significant drivers of biodiversity decline. However, distinguishing between the impacts of these two drivers on native species can be difficult. For example, habitat modification may reduce native species abundance, while an invasive species may take advantage of the new environment. This scenario has been described as the driver‐passenger model, with ‘passengers’ taking advantage of habitat modification and ‘drivers’ causing native species decline. Therefore, research must incorporate both habitat modification and invasive species impact to successfully investigate native species decline. In this paper, we used the common myna (Acridotheres tristis) as a case study to investigate the driver‐passenger model. We investigated changes in bird abundance, over 2 years, in relation to different habitat types and common myna abundance. We hypothesized that the common myna is both a passenger of habitat change and a driver of some bird species decline. Our results indicated that the abundance of many native species is greater in high tree density nature reserves, while the common myna was uncommon in these areas. Common myna abundance was almost three times higher in urban areas than nature reserves and declined rapidly as tree density in nature reserves increased. Our findings indicated that the common myna is primarily a passenger of habitat change. However, we also observed negative associations between common myna abundance and some bird species. We stress the importance of simultaneously investigating both invasive species impact and habitat modification. We suggest habitat restoration could be a useful tool for both native species recovery and invasive species control. Understanding the drivers of native species decline will help inform impact mitigation and direct further research.     

Can 'continuity indicator species' predict species richness or red-listed species of saproxylic beetles?

This study investigates the relationship between the abundance of wood-rotting fungus suggested as 'continuity indicator species' and environmental variables for the assemblage of saproxylic (wood-living) beetles associated with Fomitopsis pinicola fruiting bodies in a mature spruce forest in southeastern Norway. The presence of species thought to indicate continuity in old growth is one of the criteria used when finding and delineating small protected areas ('woodland key habitats') in Scandinavian forestry. Although it is clear that remnants of old-growth forest are important for many taxa, documentation as to which entities or species the indicator species indeed indicate is scarce. If stands with a continuous and unbroken input of dead wood have a unique assemblage of wood-rotting fungi, it seems relevant to ask if these stands also have a unique assemblage of rare saproxylic beetles. I find that the indicator species exhibit no significant correlations with beetle species richness or with the presence of red-listed saproxylic beetles as a group. The different characteristics of dead wood conditions are the most important environmental variables that explain both the species richness and the presence of red-listed beetles. Single-species analyses reveal contrasting relationships. The red-listed beetle Atomaria alpina shows a significant and positive association to the abundance of indicator species. Contrary, a group of three red-listed species with similar ecology in the family Cisidae exhibits a significant and negative association to indicator species abundance. This indicates that important patterns are concealed when considering general measures such as overall presence of red-listed beetles. Single-species studies are necessary in order to correctly understand how rare beetles respond to forestry activities and to develop a policy that can secure their continuing existence in the boreal forest.     

First human-caused extinction of a cetacean species?

The Yangtze River dolphin or baiji (Lipotes vexillifer), an obligate freshwater odontocete known only from the middle-lower Yangtze River system and neighbouring Qiantang River in eastern China, has long been recognized as one of the world's rarest and most threatened mammal species. The status of the baiji has not been investigated since the late 1990s, when the surviving population was estimated to be as low as 13 individuals. An intensive six-week multi-vessel visual and acoustic survey carried out in November-December 2006, covering the entire historical range of the baiji in the main Yangtze channel, failed to find any evidence that the species survives. We are forced to conclude that the baiji is now likely to be extinct, probably due to unsustainable by-catch in local fisheries. This represents the first global extinction of a large vertebrate for over 50 years, only the fourth disappearance of an entire mammal family since AD 1500, and the first cetacean species to be driven to extinction by human activity. Immediate and extreme measures may be necessary to prevent the extinction of other endangered cetaceans, including the sympatric Yangtze finless porpoise (Neophocaena phocaenoides asiaeorientalis).     

Taxonomic review of the Indian species of Asecodes Fӧrster (Chalcidoidea: Eulophidae), with description of four new species

The Indian species of Asecodes F?rster (Eulophidae: Entedoninae) are reviewed. Six species are recognized for the genus, of which four species are described as new: A. doganlari Jamali & Zeya, sp. nov., A. massi Jamali & Zeya, sp. nov., A. sela Jamali & Zeya, sp. nov, A. zhui Jamali & Zeya, sp. nov.. One species: A. delucchii (Bou?ek) is recorded for the first time from the country.     

What limits a rare alpine plant species? Comparative demography of three endemic species of Myosotis (Boraginaceae)

Abstract Establishing what are the underlying causes of species range limits is of fundamental interest in ecology. We followed the fate of individually mapped plants of three endemic New Zealand high‐alpine species of Myosotis, over a period of 9 years. The species provide contrasts in their geographical range and their demography. Myosotis oreophila Petrie is rare and extremely localized (c. 0.5 ha extent), Myosotis cheesemanii Petrie is regionally endemic, and Myosotis pulvinaris Hook. f. is more widespread. All three occur on the Dunstan Mountains, Central Otago, South Island, New Zealand within a 1‐km radius, and individual plants were followed in four permanent plots. The three species differed in their longevity and in population variability, with the most widespread species (M. pulvinaris) having the lowest survival (61% per year), the fewest old plants (only 3% of plants present in 1993 surviving until 2001), no increase in survival rates with age, and the most variability in total numbers across years. Both of the rare species, M. oreophila and M. cheesemanii, had higher survival (75% and 88%, respectively, per year) especially for older plants, many older plants (20% and 59%, respectively, of 1993 plants surviving until 2001), and lower variability in total numbers across years. These results are consistent with other studies showing that rare plant species tend to have higher inertia than more common congeners. The range limits of M. oreophila showed a high level of spatial constancy on a scale of metres over the 9 years, despite 80% turnover in plants during that time. The M. oreophila population showed lower mean densities of plants near to the population boundaries, identical age‐specific survival rates, but lower flowering probabilities, than the core of the population. We were unable to detect any abiotic differences between inside and outside the M. oreophila range in terms of topography, soil parent materials, microclimate or through manipulation of snow cover. Disturbance may be a factor affecting the distribution of M. cheesemanii but limiting factors for M. oreophila and M. pulvinaris are likely to be biotic (competition, seed limitation, dispersal capacity) and/or historic. Further experimentation is recommended.     

Is the originality of a species measurable?

In this paper, we introduce the concept of 'originality of a species within a set' in order to indicate the average rarity of all the features belonging to this species. Using a phylogenetic tree of 70 species of New World terrestrial Carnivora, we suggest measuring the originality by a probability distribution. This maximizes the expected number of features shared by two species randomly drawn from the set. By using this new index, we take account of branch lengths whereas current indices of originality focus on tree topology. As a supplement to Nee and May's optimizing algorithm, we find that originality must be one of the criteria used in conservation planning.     

Dispersal of fleshy-fruited species: a matter of spatial scale?

The processes associated with the dispersal of fleshy-fruited species have been an important focus of ecological research during the last two decades. These processes include fruit removal, seed rain, seed predation, seed bank dynamics, germination and establishment. Some of them interfere with the mutualistic interaction of frugivorous birds and fleshy-fruited plants. We might expect such interference to be most pronounced where the intensity of the different processes has a spatial distribution similar to that of the original seed shadow. The central theme of this review is that the main processes associated with dispersal and recruitment act at different spatial scales. To investigate this idea, about 140 publications on dispersal of fleshy-fruited species from 1980 to 2000 were screened for the spatial scaling of these processes. Microhabitat, habitat, landscape, region and biome were the five spatial scales most commonly used. However, the representation of the different scales was not fully balanced; large-scale studies were scarce and most publications considered only one scale.The review reveals some trends in scaling of the main processes of plant dispersal and recruitment. Seed dispersal by birds and seed predation by rodents are strongly determined at the habitat level, and several studies report negative results for contrasts between microhabitats. Germination and seedling establishment, on the other hand, appear to be mainly influenced by differences between microhabitats, though information on larger scales is scarce. Genetic differentiation and phenology of fruiting have mostly been investigated at the habitat, landscape and regional scale, whereas information on the abundance of frugivorous birds and patterns in plant distribution results are available across the full range of scales from the level of the microhabitat to the region and biome. Future research should be directed to the major gaps in our knowledge, i.e. regional and zonal comparisons of the processes associated with dispersal. They should also be more sensitive to scale issues and ideally should have a multi-scaled design.     

Co-variation and indicators of species diversity: Can richness of forest-dwelling species be predicted in northern boreal forests?

Design and establishment of ecologically good networks of conservation areas often requires quick assessments of their biodiversity. Reliable indicators would be useful when doing such assessments. In order to explore the potential indicators for species richness in boreal forests, we studied (1) the co-variation of species richness and composition of species assemblages among beetles, polypores, birds and vascular plants, (2) the relationships between species richness and four boreal forest site types, (3) the relationship between species richness and forest physical structure and (4) the suitability of potential indicator groups within the four taxa to predict the species richness generally. The data show that there are probably not a single taxonomic or forest structural characteristic to be used as a general biodiversity indicator or surrogate for all the species. The correlations in species richness among the four taxa studied were low. However, group-specific indicators were obvious: forest site type was a good surrogate for vascular plant richness, and quantity and quality of dead wood predicted the species richness of polypores. The results support the view that different indicators shall be used for different forest types and taxonomic groups. These indicators should facilitate relatively rapid methods to assess biodiversity patterns at the forest stand level.     

How many species of Cladocera are there?

An estimation of the number of taxa within families, genera and local faunas of Cladocera reveals that only c. 129 species (17% of all known species) may be considered as sufficiently well described (valid species), and c. 146 as rather well described (fair species) but needing further study using modern methods of investigation. The status of all other species is vague. The families Chydoridae, Daphniidae and Sididae and genera Diaphanosoma, Daphnia, (including Daphniopsis), Megafenestra, Scapholeberis, Eurycercus, Chydorus, Ephemeroporus and Pleuroxus have been comparatively studied best. The largest number of valid species is known from Europe, North America, Australia and South America, and the smallest number from Africa. Presence of large number of vague species of Cladocera negatively affects faunistic, zoogeographic, and ecological studies of continental waters.Dedicated to the memory of Professor D. J. Frey     

In vivo species specificity of DNA polymerase α

The DNA polymerase a enzymes from human, and budding (Saccharomyces cerevisiae) and fission yeast (Schizosaccharomyces pombe) are homologous proteins involved in initiation and replication of chromosomal DNA. Sequence comparision of human DNA polymerase α with that of S. cerevisiae and S. pombe shows overall levels of amino acid sequence identity of 32% and 34%, respectively. We report here that, despite the sequence conservation among these three enzymes, functionally active human DNA polymerase a fails to rescue several different conditional lethal alleles of the budding yeast POL1 gene at nonpermissive temperature. Furthermore, human DNA polymerase α cannot complement a null allele of budding yeast POL1 either in germinating spores or in vegetatively growing cells. In fission yeast, functionally active human DNA polymerase α is also unable to complement the disrupted polα::ura4 ⁺ allele in germinating spores. Thus, in vivo, DNA polymerase α has stringent species specificity for initiation and replication of chromosomal DNA.     

Further studies of the β-lactamases ofBacteroides species

The -lactamases of individual strains ofBacteroides fragilis, B. thetaiotaomicron, andB. melaninogenicus were examined to characterize their enzymatic activity and the relation between the periplasmic and cytoplasmic forms of the enzymes. K_m and V_max values indicate that all strains examined were very similar in terms of enzymatic activity with the antibiotics tested. Electrophoretic analysis and treatment with phospholipase D suggest the presence of a cytoplasmic form of the enzyme that is modified upon entry into the periplasmic space.