Measuring and modelling seasonal variation of carbon dioxide and water vapour exchange of a Pinus ponderosa forest subject to soil water deficit

We conducted ecosystem carbon and water vapour exchange studies in an old‐growth Pinus ponderosa forest in the Pacific North‐west region of the United States. The canopy is heterogeneous, with tall multiaged trees and an open, clumped canopy with low leaf area. Carbon assimilation can occur throughout relatively mild winters, although night frosts can temporarily halt the process and physiological factors limit its efficiency. In contrast, carbon assimilation is often limited in the ‘growing season’ by stomatal closure associated with high evaporative demand (D) and soil water deficits. All of these factors present a challenge to effectively modelling ecosystem processes. Our objective was to generate an understanding of the controls on ecosystem processes across seasonal and annual cycles from a combination of fine‐scale process modelling, ecophysiological measurements, and carbon and water vapour fluxes measured by the eddy covariance method. Flux measurements showed that 50% and 70% of the annual carbon uptake occurred outside the ‘growing season’ (defined as bud break to senescence, ～ days 125–275) in 1996 and 1997. On a daily basis in summer, net ecosystem productivity (NEP) was low when D and soil water deficits were large. Whole ecosystem water vapour fluxes (LE) increased from spring to summer (1.0–1.9 mm d?1) as conducting leaf area increased by 30% and as evaporative demand increased, while evaporation from the soil surface became a smaller portion of total LE as soil water deficits increased. The models underestimated soil evaporation, particularly following rain. In the SPA model, varying the temperature optimum for photosynthesis seasonally resulted in overestimation of carbon uptake in winter and spring, showing that in coniferous forests, assumptions about temperature optima are clearly important. Daily estimates of soil surface CO₂ flux from measurements and site meteorological data demonstrated that modelling of soil CO₂ flux based on an Arrhenius‐type equation in CANPOND overestimated CO₂ respired from the soil during drought and when temperatures were low.     

Measuring and modelling carbon dioxide and water vapour exchange over a temperate broad-leaved forest during the 1995 summer drought

Forests in the south-eastern United States experienced a prolonged dry spell and above-normal temperatures during the 1995 growing season. During this episode, nearly continuous, eddy covariance measurements of carbon dioxide and water vapour fluxes were acquired over a temperate, hardwood forest. These data are used to examine how environmental factors and accumulating soil moisture deficits affected the diurnal pattern and magnitude of canopy-scale carbon dioxide and water vapour fluxes. The field data are also used to test an integrative leaf-to-canopy scaling model (CANOAK), which uses micrometeorological and physiological theory, to calculate mass and energy fluxes. When soil moisture was ample in the spring, peak rates of net ecosystem CO₂ exchange (N_F) occurred around midday and exceeded 20 μmol m^?2 s^?1. Rates of N_K were near optimal when air temperature ranged between 22 and 25°C. The accumulation of soil moisture deficits and a co-occurrence of high temperatures caused peak rates of daytime carbon dioxide uptake to occur earlier in the morning. High air temperatures and soil moisture deficits were also correlated with a dramatic reduction in the magnitude of N_E. On average, the magnitude of N_E decreased from 20 to 7 μmol m^?2 s^?1 as air temperature increased from 24 to 30°C and the soil dried. The CANAOK model yielded accurate estimates of canopy-scale carbon dioxide and water vapour fluxes when the forest had an ample supply of soil moisture. During the drought and heat spell, a cumulative drought index was needed to adjust the proportionality constant of the stomatal conductance model to yield accurate estimates of canopy CO₂ exchange. The adoption of the drought index also enabled the CANOAK model to give improved estimates of evaporation until midday. On the other hand, the scheme failed to yield accurate estimates of evaporation during the afternoon.     

The annual cycles of CO2 and H2O exchange over a northern mixed forest as observed from a very tall tower

We present the annual patterns of net ecosystem‐atmosphere exchange (NEE) of CO₂ and H2O observed from a 447 m tall tower sited within a mixed forest in northern Wisconsin, USA. The methodology for determining NEE from eddy‐covariance flux measurements at 30, 122 and 396 m above the ground, and from CO₂ mixing ratio measurements at 11, 30, 76, 122, 244 and 396 m is described. The annual cycle of CO₂ mixing ratio in the atmospheric boundary layer (ABL) is also discussed, and the influences of local NEE and large‐scale advection are estimated. During 1997 gross ecosystem productivity (947?18 g C m^?2 yr^?1), approximately balanced total ecosystem respiration (963±19 g C m^?2 yr^?1), and NEE of CO₂ was close to zero (16±19 g C m^?2 yr^?1 emitted into the atmosphere). The error bars represent the standard error of the cumulative daily NEE values. Systematic errors are also assessed. The identified systematic uncertainties in NEE of CO₂ are less than 60 g C m^?2 yr^?1. The seasonal pattern of NEE of CO₂ was highly correlated with leaf‐out and leaf‐fall, and soil thaw and freeze, and was similar to purely deciduous forest sites. The mean daily NEE of CO₂ during the growing season (June through August) was ?1.3 g C m^?2 day^?1, smaller than has been reported for other deciduous forest sites. NEE of water vapor largely followed the seasonal pattern of NEE of CO₂, with a lag in the spring when water vapor fluxes increased before CO₂ uptake. In general, the Bowen ratios were high during the dormant seasons and low during the growing season. Evapotranspiration normalized by potential evapotranspiration showed the opposite pattern. The seasonal course of the CO₂ mixing ratio in the ABL at the tower led the seasonal pattern of NEE of CO₂ in time: in spring, CO₂ mixing ratios began to decrease prior to the onset of daily net uptake of CO₂ by the forest, and in fall mixing ratios began to increase before the forest became a net source for CO₂ to the atmosphere. Transport as well as local NEE of CO₂ are shown to be important components of the ABL CO₂ budget at all times of the year.     

Annual cycles of water vapour and carbon dioxide fluxes in and above a boreal aspen forest

Water vapour and CO₂ fluxes were measured using the eddy correlation method above and below the overstorey of a 21-m tall aspen stand in the boreal forest of central Saskatchewan as part of the Boreal Ecosystem-Atmosphere Study (BOREAS). Measurements were made at the 39.5-m and 4-m heights using 3-dimensional sonic anemometers (Kaijo-Denki and Solent, respectively) and closed-path gas analysers (LI-COR 6262) with 6-m and 4.7-m long heated sampling tubing, respectively. Continuous measurements were made from early October to mid-November 1993 and from early February to late-September 1994. Soil CO₂ flux (respiration) was measured using a LI-COR 6000-09 soil chamber and soil evaporation was measured using Iysimetry. The leaf area index of the aspen and hazelnut understorey reached 1.8 and 3.3, respectively. The maximum daily evapotranspiration (E) rate was 5–6 mm d^?1. Following leaf-out the hazelnut and soil accounted for 22% of the forest E. The estimated total E was 403 mm for 1994. About 88% of the precipitation in 1994 was lost as evapotranspiration. During the growing season, the magnitude of half-hourly eddy fluxes of CO₂ from the atmosphere into the forest reached 1.2 mg CO₂ m^?2 s^?1 (33 μmol C m^?2 s^?1) during the daytime. Downward eddy fluxes at the 4-m height were observed when the hazelnut was growing rapidly in June and July. Under well-ventilated night-time conditions, the eddy fluxes of CO₂ above the aspen and hazelnut, corrected for canopy storage, increased exponentially with soil temperature at the 2-cm depth. Estimates of daytime respiration rates using these relationships agreed well with soil chamber measurements. During the 1994 growing season, the cumulative net ecosystem exchange (NEE) was -3.5 t C ha^?1 y^?1 (a net gain by the system). For 1994, cumulative NEE, ecosystem respiration (R) and gross ecosystem photosynthesis (GEP = R - NEE) were estimated to be -1.3, 8.9 and 10.2 t C ha^?1 y^?1 respectively. Gross photosynthesis of the hazelnut was 32% of GEP.     

Hydrologic balance in an intact temperate forest ecosystem under ambient and elevated atmospheric CO2 concentration

Abstract Increasing atmospheric CO₂ concentration decreases stomatal conductance in many species, but the savings of water from reduced transpiration may permit the forest to retain greater leaf area index (L). Therefore, the net effect on water use in forest ecosystems under a higher CO₂ atmosphere is difficult to predict. The free air CO₂ enrichment (FACE) facility (n = 3) in a 14‐m tall (in 1996) Pinus taeda L. stand was designed to reduce uncertainties in predicting such responses. Continuous measurements of precipitation, throughfall precipitation, sap flux, and soil moisture were made over 3.5 years under ambient (CO₂^a) and elevated (CO₂^e) ambient + 200 µmol mol^?1). Annual stand transpiration under ambient CO₂ conditions accounted for 84–96% of latent heat flux measured with the eddy‐covariance technique above the canopy. Under CO₂^e, P. taeda transpired less per unit of leaf area only when soil drought was severe. Liquidambar styraciflua, the other major species in the forest, used progressively less water, settling at 25% reduction in sap flux density after 3.5 years under CO₂^e. Because P. taeda dominated the stand, and severe drought periods were of relatively short duration, the direct impact of CO₂^e on water savings in the stand was undetectable. Moreover, the forest used progressively more water under CO₂^e, probably because soil moisture availability progressively increased, probably owing to a reduction in soil evaporation caused by more litter buildup in the CO₂^e plots. The results suggest that, in this forest, the effect of CO₂^e on transpiration was greater indirectly through enhanced litter production than directly through reduced stomatal conductance. In forests composed of species more similar to L. styraciflua, water savings from stomatal closure may dominate the response to CO₂^e.     

Modelling the discrimination of 13CO2 above and within a temperate broad-leaved forest canopy on hourly to seasonal time scales

Fluxes and concentrations of carbon dioxide and ¹³CO₂ provide information about ecosystem physiological processes and their response to environmental variation. The biophysical model, CANOAK, was adapted to compute concentration profiles and fluxes of ¹³CO₂ within and above a temperate deciduous forest (Walker Branch Watershed, Tennessee, USA). Modifications to the model are described and the ability of the new model (CANISOTOPE) to simulate concentration profiles of ¹³CO₂, its flux density across the canopy–atmosphere interface and leaf‐level photosynthetic discrimination against ¹³CO₂ is demonstrated by comparison with field measurements. The model was used to investigate several aspects of carbon isotope exchange between a forest ecosystem and the atmosphere. During the 1998 growing season, the mean photosynthetic discrimination against ¹³CO₂, by the deciduous forest canopy (Δ_canopy), was computed to be 22·4‰, but it varied between 18 and 27‰. On a diurnal basis, the greatest discrimination occurred during the early morning and late afternoon. On a seasonal time scale, the greatest diurnal range in Δ_canopy occurred early and late in the growing season. Diurnal and seasonal variations in Δ_canopy resulted from a strong dependence of Δ_canopy on photosynthetically active radiation and vapour pressure deficit of air. Model calculations also revealed that the relationship between canopy‐scale water use efficiency (CO₂ assimilation/transpiration) and Δ_canopy was positive due to complex feedbacks among fluxes, leaf temperature and vapour pressure deficit, a finding that is counter to what is predicted for leaves exposed to well‐mixed environments.     

The positive net radiative greenhouse gas forcing of increasing methane emissions from a thawing boreal forest‐wetland landscape

At the southern margin of permafrost in North America, climate change causes widespread permafrost thaw. In boreal lowlands, thawing forested permafrost peat plateaus (‘forest’) lead to expansion of permafrost‐free wetlands (‘wetland’). Expanding wetland area with saturated and warmer organic soils is expected to increase landscape methane (CH₄) emissions. Here, we quantify the thaw‐induced increase in CH₄ emissions for a boreal forest‐wetland landscape in the southern Taiga Plains, Canada, and evaluate its impact on net radiative forcing relative to potential long‐term net carbon dioxide (CO₂) exchange. Using nested wetland and landscape eddy covariance net CH₄ flux measurements in combination with flux footprint modeling, we find that landscape CH₄ emissions increase with increasing wetland‐to‐forest ratio. Landscape CH₄ emissions are most sensitive to this ratio during peak emission periods, when wetland soils are up to 10 °C warmer than forest soils. The cumulative growing season (May–October) wetland CH₄ emission of ~13 g CH₄ m^?2 is the dominating contribution to the landscape CH₄ emission of ~7 g CH₄ m^?2. In contrast, forest contributions to landscape CH₄ emissions appear to be negligible. The rapid wetland expansion of 0.26 ± 0.05% yr^?1 in this region causes an estimated growing season increase of 0.034 ± 0.007 g CH₄ m^?2 yr^?1 in landscape CH₄ emissions. A long‐term net CO₂ uptake of >200 g CO₂ m^?2 yr^?1 is required to offset the positive radiative forcing of increasing CH₄ emissions until the end of the 21st century as indicated by an atmospheric CH₄ and CO₂ concentration model. However, long‐term apparent carbon accumulation rates in similar boreal forest‐wetland landscapes and eddy covariance landscape net CO₂ flux measurements suggest a long‐term net CO₂ uptake between 49 and 157 g CO₂ m^?2 yr^?1. Thus, thaw‐induced CH₄ emission increases likely exert a positive net radiative greenhouse gas forcing through the 21st century.     

Carbon sequestration in a high-elevation, subalpine forest

We studied net ecosystem CO₂ exchange (NEE) dynamics in a high‐elevation, subalpine forest in Colorado, USA, over a two‐year period. Annual carbon sequestration for the forest was 6.71 mol C m^?2 (80.5 g C m^?2) for the year between November 1, 1998 and October 31, 1999, and 4.80 mol C m^?2 (57.6 g C m^?2) for the year between November 1, 1999 and October 31, 2000. Despite its evergreen nature, the forest did not exhibit net CO₂ uptake during the winter, even during periods of favourable weather. The largest fraction of annual carbon sequestration occurred in the early growing‐season; during the first 30 days of both years. Reductions in the rate of carbon sequestration after the first 30 days were due to higher ecosystem respiration rates when mid‐summer moisture was adequate (as in the first year of the study) or lower mid‐day photosynthesis rates when mid‐summer moisture was not adequate (as in the second year of the study). The lower annual rate of carbon sequestration during the second year of the study was due to lower rates of CO₂ uptake during both the first 30 days of the growing season and the mid‐summer months. The reduction in CO₂ uptake during the first 30 days of the second year was due to an earlier‐than‐normal spring warm‐up, which caused snow melt during a period when air temperatures were lower and atmospheric vapour pressure deficits were higher, compared to the first 30 days of the first year. The reduction in CO₂ uptake during the mid‐summer of the second year was due to an extended drought, which was accompanied by reduced latent heat exchange and increased sensible heat exchange. Day‐to‐day variation in the daily integrated NEE during the summers of both years was high, and was correlated with frequent convective storm clouds and concomitant variation in the photosynthetic photon flux density (PPFD). Carbon sequestration rates were highest when some cloud cover was present, which tended to diffuse the photosynthetic photon flux, compared to periods with completely clear weather. The results of this study are in contrast to those of other studies that have reported increased annual NEE during years with earlier‐than‐normal spring warming. In the current study, the lower annual NEE during 2000, the year with the earlier spring warm‐up, was due to (1) coupling of the highest seasonal rates of carbon sequestration to the spring climate, rather than the summer climate as in other forest ecosystems that have been studied, and (2) delivery of snow melt water to the soil when the spring climate was cooler and the atmosphere drier than in years with a later spring warm‐up. Furthermore, the strong influence of mid‐summer precipitation on CO₂ uptake rates make it clear that water supplied by the spring snow melt is a seasonally limited resource, and summer rains are critical for sustaining high rates of annual carbon sequestration.     

Carbon dioxide and methane exchange of a north-east Siberian tussock tundra

Carbon dioxide, energy flux measurements and methane chamber measurements were carried out in an arctic wet tussock grassland located on a flood plane of the Kolyma river in NE Siberia over a summer period of 155 days in 2002 and early 2003. Respiration was also measured in April 2004. The study region is characterized by late thaw of the top soil (mid of June) and periodic spring floods. A stagnant water table below the grass canopy is fed by thawing of the active layer of permafrost and by flood water. The climate is continental with average daily temperature in the warmest months of 13°C (maximum temperature at midday: 28°C by the end of July), dry air (maximum vapour pressure deficit at midday: 28 hPa) and low rainfall of 50 mm during summer (July–September). Summer evaporation (July–September: 103 mm) exceeded rainfall by a factor of 2. The daily average Bowen ratio (H/LE) was 0.62 during the growing season. Net ecosystem CO₂ uptake reached 10 μmol m⁻² s⁻¹ and was related to photon flux density (PFD) and vapour pressure deficit (VPD). The cumulative annual net carbon flux from the atmosphere to the terrestrial surface was estimated to be about −38 g C m⁻² yr⁻¹ (negative flux depicts net carbon sink). Winter respiration was extrapolated using the Lloyd and Taylor function. The net carbon balance is composed of a high rate of assimilation in a short summer and a fairly large but uncertain respiration mainly during autumn and spring. Methane flux (about 12 g C m⁻² measured over 60 days) was 25% of C uptake during the same period of time (end of July to end of September). Assuming that CH₄ was emitted only in summer, and taking the greenhouse gas warming potential of CH₄ vs. CO₂ into account (factor 23), the study site was a greenhouse gas source (at least 200 g C_equivalent m⁻² yr⁻¹). Comparing different studies in wetlands and tundra ecosystems as related to latitude, we expect that global warming would rather increase than decrease the CO₂-C sink.     

Seasonal variation in energy fluxes and carbon dioxide exchange for a broad-leaved semi-arid savanna (Mopane woodland) in Southern Africa

We studied the seasonal variation in carbon dioxide, water vapour and energy fluxes in a broad‐leafed semi‐arid savanna in Southern Africa using the eddy covariance technique. The open woodland studied consisted of an overstorey dominated by Colophospermum mopane with a sparse understorey of grasses and herbs. Measurements presented here cover a 19‐month period from the end of the rainy season in March 1999 to the end of the dry season September 2000. During the wet season, sensible and latent heat fluxes showed a linear dependence on incoming solar radiation (I) with a Bowen ratio (β) typically just below unity. Although β was typically around 1 at low incoming solar radiation (150 W m^?2) during the dry season, it increased dramatically with I, typically being as high as 4 or 5 around solar noon. Thus, under these water‐limited conditions, almost all available energy was dissipated as sensible, rather than latent heat. Marked spikes of CO₂ release occurred at the onset of the rainfall season after isolated rainfall events and respiration dominated the balance well into the rainfall season. During this time, the ecosystem was a constant source of CO₂ with an average flux of 3–5 μmol m^?2 s^?1 to the atmosphere during both day and night. But later in the wet season, for example, in March 2000 under optimal soil moisture conditions, with maximum leaf canopy development (leaf area index 0.9–1.3), the peak ecosystem CO₂ influx was as much as 10 μmol m^?2 s^?1. The net ecosystem maximum photosynthesis at this time was estimated at 14 μmol m^?2 s^?1, with the woodland ecosystem a significant sink for CO₂. During the dry season, just before leaf fall in August, maximum day‐ and night‐time net ecosystem fluxes were typically ?3 μmol m^?2 s^?1 and 1–2 μmol m^?2 s^?1, respectively, with the ecosystem still being a marginal sink. Over the course of 12 months (March 1999–March 2000), the woodland was more or less carbon neutral, with a net uptake estimated at only about 1 mol C m^?2 yr^?1. The annual net photosynthesis (gross primary production) was estimated at 32.2 mol m^?2 yr^?1.     

Rain events decrease boreal peatland net CO2 uptake through reduced light availability

Boreal peatlands store large amounts of carbon, reflecting their important role in the global carbon cycle. The short‐term exchange and the long‐term storage of atmospheric carbon dioxide (CO₂) in these ecosystems are closely associated with the permanently wet surface conditions and are susceptible to drought. Especially, the single most important peat forming plant genus, Sphagnum, depends heavily on surface wetness for its primary production. Changes in rainfall patterns are expected to affect surface wetness, but how this transient rewetting affects net ecosystem exchange of CO₂ (NEE) remains unknown. This study explores how the timing and characteristics of rain events during photosynthetic active periods, that is daytime, affect peatland NEE and whether rain event associated changes in environmental conditions modify this response (e.g. water table, radiation, vapour pressure deficit, temperature). We analysed an 11‐year time series of half‐hourly eddy covariance and meteorological measurements from Degerö Stormyr, a boreal peatland in northern Sweden. Our results show that daytime rain events systematically decreased the sink strength of peatlands for atmospheric CO₂. The decrease was best explained by rain associated reduction in light, rather than by rain characteristics or drought length. An average daytime growing season rain event reduced net ecosystem CO₂ uptake by 0.23–0.54 gC m^?2. On an annual basis, this reduction of net CO₂ uptake corresponds to 24% of the annual net CO₂ uptake (NEE) of the study site, equivalent to a 4.4% reduction of gross primary production (GPP) during the growing season. We conclude that reduced light availability associated with rain events is more important in explaining the NEE response to rain events than rain characteristics and changes in water availability. This suggests that peatland CO₂ uptake is highly sensitive to changes in cloud cover formation and to altered rainfall regimes, a process hitherto largely ignored.     

Temporal expression of effects of varying nitrogen supply on canopy growth, photosynthesis and fruit production for Actinidia deliciosa vines in the field

The effects of varying nitrogen supply on canopy leaf area, response of leaf net photosynthesis (A_n) to quantum flux density (Q), and fruit yields of kiwifruit vines (Actinidia deliciosa var. deliciosa) were examined in a two-year field experiment. Vines were grown with 0, 250 or 750 kg N ha^?1 year^?1. The responses to nitrogen supply were compared with responses to shade, to examine the impact of reduced carbon assimilation on canopy leaf area and fruit yields. Nitrogen supply did not affect significantly any of the measured variables during the first season of the experiment. In the second season, canopy leaf area was reduced significantly where nitrogen supply was limited. The quantum efficiency of photosynthesis (φ_q) increased from 0. 03 mol CO₂ mol^?1 Q soon after leaf emergence to more than 0. 05 mol CO₂ mol^?1 Q during the middle of the growing season. The quantum saturated rate of A_n (A_sat) also increased during the season, from 7–10 μmol CO₂ m^?2 s^?1 soon after leaf emergence, to 15–20 (μmol CO₂ m^?2 s^?1 during the middle of the growing season. φ_q and A_sat increased significantly with nitrogen supply at all measurement times during the second season. For vines with high nitrogen, fruit yields in both seasons were similar, averaging 3. 05 kg m^?2. Fruit yields in the second season were reduced significantly where nitrogen supply was limited, due to reduced fruit numbers. The relative effects of reduced leaf area and reduced leaf photosynthesis for carbon assimilation by nitrogen deficient vines were examined using a mathematical model of canopy photosynthesis for kiwifruit vines. Simulations of canopy photosynthesis indicated that effects on leaf area and on leaf photosynthesis were of similar importance in the overall effects of nitrogen deficiency on carbon assimilation. The effects of nitrogen supply on fruit numbers (i. e. flower development) preceded the measured effects on carbon assimilation, indicating that the nitrogen supply affected carbon partitioning to reserves in the first season.     

Fluxes of carbon, water and energy over Brazilian cerrado: an analysis using eddy covariance and stable isotopes

We present the energy and mass balance of cerrado sensu stricto (a Brazilian form of savanna), in which a mixture of shrubs, trees and grasses forms a vegetation with a leaf area index of 1·0 in the wet season and 0·4 in the dry season. In the wet season the available energy was equally dissipated between sensible heat and evaporation, but in the dry season at high irradiance the sensible heat greatly exceeded evaporation. Ecosystem surface conductance g_s in the wet season rose abruptly to 0·3 mol m^?2 s^?1 and fell gradually as the day progressed. Much of the total variation in g_s was associated with variation in the leaf-to-air vapour pressure deficit of water and the solar irradiance. In the dry season the maximal g_s values were only 0·1 mol m^?2 s^?1. Maximal net ecosystem fluxes of CO₂ in the wet and dry season were –10 and –15 μmol CO₂ m^?2 s^?1, respectively (sign convention: negative denotes fluxes from atmosphere to vegetation). The canopy was well coupled to the atmosphere, and there was rarely a significant build-up of respiratory CO₂ during the night. For observations in the wet season, the vegetation was a carbon dioxide sink, of maximal strength 0·15 mol m^?2 d^?1. However, it was a source of carbon dioxide for a brief period at the height of the dry season. Leaf carbon isotopic composition showed all the grasses except for one species to be C₄, and all the palms and woody plants to be C₃. The CO₂ coming from the soil had an isotopic composition that suggested 40% of it was of C₄ origin.     

Diurnal and seasonal variation in methane emissions in a northern Canadian peatland measured by eddy covariance

Eddy covariance measurements of methane (CH₄) net flux were made in a boreal fen, typical of the most abundant peatlands in western Canada during May–September 2007. The objectives of this study were to determine: (i) the magnitude of diurnal and seasonal variation in CH₄ net flux, (ii) the relationship between the temporally varying flux rates and associated changes in controlling biotic and abiotic factors, and (iii) the contribution of CH₄ emission to the ecosystem growing season carbon budget. There was significant diurnal variation in CH₄ emission during the peak of the growing season that was strongly correlated with associated changes in solar radiation, latent heat flux, air temperature and ecosystem conductance to water vapor. During days 181–215, nighttime average CH₄ efflux was only 47% of the average midday values. The peak value for daily average CH₄ emission rate was approximately 80 nmol m^?2 s^?1 (4.6 mg CH₄ m^?2 h^?1), and seasonal variation in CH₄ flux was strongly correlated with changes in soil temperature. Integrated over the entire measurement period [days 144–269 (late May–late September)], the total CH₄ emission was 3.2 g CH₄ m^?2, which was quite low relative to other wetland ecosystems and to the simultaneous high rate of ecosystem net CO₂ sequestration that was measured (18.1 mol CO₂ m^?2 or 217 g C m^?2). We estimate that the negative radiative forcing (cooling) associated with net carbon storage over the life of the peatland (approximately 2200 years) was at least twice the value of positive radiative forcing (warming) caused by net CH₄ emission over the last 50 years.     

Forest and agricultural land-use-dependent CO2 exchange in Thuringia, Germany

Eddy covariance was used to measure the net CO₂ exchange (NEE) over ecosystems differing in land use (forest and agriculture) in Thuringia, Germany. Measurements were carried out at a managed, even‐aged European beech stand (Fagus sylvatica, 70–150 years old), an unmanaged, uneven‐aged mixed beech stand in a late stage of development (F. sylvatica, Fraxinus excelsior, Acer pseudoplantanus, and other hardwood trees, 0–250 years old), a managed young Norway spruce stand (Picea abies, 50 years old), and an agricultural field growing winter wheat in 2001, and potato in 2002. Large contrasts were found in NEE rates between the land uses of the ecosystems. The managed and unmanaged beech sites had very similar net CO₂ uptake rates (～?480 to ?500 g C m^?2 yr^?1). Main differences in seasonal NEE patterns between the beech sites were because of a later leaf emergence and higher maximum leaf area index at the unmanaged beech site, probably as a result of the species mix at the site. In contrast, the spruce stand had a higher CO₂ uptake in spring but substantially lower net CO₂ uptake in summer than the beech stands. This resulted in a near neutral annual NEE (?4 g C m^?2 yr^?1), mainly attributable to an ecosystem respiration rate almost twice as high as that of the beech stands, despite slightly lower temperatures, because of the higher elevation. Crops in the agricultural field had high CO₂ uptake rates, but growing season length was short compared with the forest ecosystems. Therefore, the agricultural land had low‐to‐moderate annual net CO₂ uptake (?34 to ?193 g C m^?2), but with annual harvest taken into account it will be a source of CO₂ (+97 to +386 g C m^?2). The annually changing patchwork of crops will have strong consequences on the regions' seasonal and annual carbon exchange. Thus, not only land use, but also land‐use history and site‐specific management decisions affect the large‐scale carbon balance.     

CO2 exchange in three Canadian High Arctic ecosystems: response to long-term experimental warming

Carbon dioxide exchange, soil C and N, leaf mineral nutrition and leaf carbon isotope discrimination (LCID‐Δ) were measured in three High Arctic tundra ecosystems over 2 years under ambient and long‐term (9 years) warmed (～2°C) conditions. These ecosystems are located at Alexandra Fiord (79°N) on Ellesmere Island, Nunavut, and span a soil water gradient; dry, mesic, and wet tundra. Growing season CO₂ fluxes (i.e., net ecosystem exchange (NEE), gross ecosystem photosynthesis (GEP), and ecosystem respiration (R_e)) were measured using an infrared gas analyzer and winter C losses were estimated by chemical absorption. All three tundra ecosystems lost CO₂ to the atmosphere during the winter, ranging from 7 to 12 g CO₂‐C m^?2 season^?1 being highest in the wet tundra. The period during the growing season when mesic tundra switch from being a CO₂ source to a CO₂ sink was increased by 2 weeks because of warming and increases in GEP. Warming during the summer stimulated dry tundra GEP more than R_e and thus, NEE was consistently greater under warmed as opposed to ambient temperatures. In mesic tundra, warming stimulated GEP with no effect on R_e increasing NEE by ～10%, especially in the first half of the summer. During the ～70 days growing season (mid‐June–mid‐August), the dry and wet tundra ecosystems were net CO₂‐C sinks (30 and 67 g C m^?2 season^?1, respectively) and the mesic ecosystem was a net C source (58 g C m^?2 season^?1) to the atmosphere under ambient temperature conditions, due in part to unusual glacier melt water flooding that occurred in the mesic tundra. Experimental warming during the growing season increased net C uptake by ～12% in dry tundra, but reduced net C uptake by ～20% in wet tundra primarily because of greater rates of R_e as opposed to lower rates of GEP. Mesic tundra responded to long‐term warming with ～30% increase in GEP with almost no change in R_e reducing this tundra type to a slight C source (17 g C m^?2 season^?1). Warming caused LCID of Dryas integrafolia plants to be higher in dry tundra and lower in Salix arctic plants in mesic and wet tundra. Our findings indicate that: (1) High Arctic ecosystems, which occur in similar mesoclimates, have different net CO₂ exchange rates with the atmosphere; (2) long‐term warming can increase the net CO₂ exchange of High Arctic tundra by stimulating GEP, but it can also reduce net CO₂ exchange in some tundra types during the summer by stimulating R_e to a greater degree than stimulating GEP; (3) after 9 years of experimental warming, increases in soil carbon and nitrogen are detectable, in part, because of increases in deciduous shrub cover, biomass, and leaf litter inputs; (4) dry tundra increases in GEP, in response to long‐term warming, is reflected in D. integrifolia LCID; and (5) the differential carbon exchange responses of dry, mesic, and wet tundra to similar warming magnitudes appear to depend, in part, on the hydrologic (soil water) conditions. Annual net ecosystem CO₂‐C exchange rates ranged from losses of 64 g C m^?2 yr^?1 to gains of 55 g C m^?2 yr^?1. These magnitudes of positive NEE are close to the estimates of NPP for these tundra types in Alexandra Fiord and in other High Arctic locations based on destructive harvests.     

High rates of net ecosystem carbon assimilation by Brachiara pasture in the Brazilian Cerrado

To investigate the consequences of land use on carbon and energy exchanges between the ecosystem and atmosphere, we measured CO₂ and water vapour fluxes over an introduced Brachiara brizantha pasture located in the Cerrado region of Central Brazil. Measurements using eddy covariance technique were carried out in field campaigns during the wet and dry seasons. Midday CO₂ net ecosystem exchange rates during the wet season were ?40 μmol m^?2 s^?1, which is more than twice the rate found in the dry season (?15 μmol m^?2 s^?1). This was observed despite similar magnitudes of irradiance, air and soil temperatures. During the wet season, inferred rates of canopy photosynthesis did not show any tendency to saturate at high solar radiation levels, with rates of around 50 μmol m^?2 s^?1 being observed at the maximum incoming photon flux densities of 2200 μmol m^?2 s^?1. This contrasted strongly to the dry period when light saturation occurred with 1500 μmol m^?2 s^?1 and with maximum canopy photosynthetic rates of only 20 μmol m^?2 s^?1. Both canopy photosynthetic rates and night‐time ecosystem CO₂ efflux rates were much greater than has been observed for cerrado native vegetation in both the wet and dry seasons. Indeed, observed CO₂ exchange rates were also much greater than has previously been reported for C₄ pastures in the tropics. The high rates in the wet season may have been attributable, at least in part, to the pasture not being grazed. Higher than expected net rates of carbon acquisition during the dry season may also have been attributable to some early rain events. Nevertheless, the present study demonstrates that well‐managed, productive tropical pastures can attain ecosystem gas exchange rates equivalent to fertilized C₄ crops growing in the temperate zone.     

Land-use change effects on local energy, water, and carbon balances in an Amazonian agricultural field

To study how changing agricultural practices in the eastern Amazon affect carbon, heat and water exchanges, a 20 m tower was installed in a field in August 2000. Measurements include turbulent fluxes (momentum, heat, water vapor, and CO₂) using the eddy covariance (EC) approach, soil heat flux, wind, and scalar profiles (T, q, and CO₂), soil moisture content, terrestrial, total solar radiation, and photosynthetically active radiation (PAR, 400–700 nm). At the beginning of the measurements, in September 2000, the field was a pasture. On November 2001, the pasture was burned, plowed, and planted in upland (nonirrigated) rice. Calm nights were the norm in this site. Anomalously low values of net ecosystem exchange (NEE) were found using the EC method, even when the common criterion u^*<0.2 m s^?1 was used to identify and exclude poor performance nights. We observed more plausible values of NEE using criterion u^*<0.08 m s^?1, indicating that the criterion must be revised downward for flow over surfaces smoother than forests. However, even using the lower threshold, u^* was lower than this limit for 82% of nights, and this led to nocturnal respiration underestimates. We compensate for this difficulty by estimating the respiration rate using the nocturnal boundary layer budget method. Land‐use change from pasture to rice cultivation strongly affected both diurnal rates of turbulent exchange but also the pattern of seasonal variation. Seasonal wet and dry season differences in vegetation state were clearly detected in the albedo and PAR‐albedo. These reflectivity changes were accompanied by modified net radiative flux, turbulent heat flux and evaporation rates. The highest evaporation rate was observed during the rice crop, when the field had total evaporation approximately half the precipitation input, less than that of the surrounding forest. Effects of the land‐cover changes were also detected in the carbon budget. For the pasture, the maximum CO₂ uptake occurred in May, appreciably delayed from the start of the rainy season. After the field was plowed and the soil was exposed and there was efflux of CO₂ to the atmosphere day and night for an extended period. Highest values of carbon uptake occurred during the rice plantation. Although the upland rice took up carbon at double the rate of the pasture that it replaced, the field was left fallow for much of the year, during the dry season.     

Carbon dioxide exchange in a high-arctic fen estimated by eddy covariance measurements and modelling

The high-arctic environment is an environment where the consequences of global warming may be significant. In this paper we report on findings on carbon dioxide and water vapour fluxes above a sedge-dominated fen at Zackenberg (74°28′N, 20°34′ W) in The National Park of North and East Greenland. Eddy covariance measurements were initiated at the start of the growing season and terminated shortly before its end lasting 45 days. The net CO₂ flux during daytime reaches a high of 10 μmol m^–2s^–1, and around the summer solstice, net CO₂ assimilation occurred at midnight, resulting in net carbon gain during the night. The measured carbon dioxide fluxes compare well to estimates based on the photosynthesis model by Collatz et al. (1991 ). The total growing-season net ecosystem CO₂ exchange was estimated to be 96 g C m^–2 based on the carbon dioxide model and micrometeorological data. Finally, the combined CO₂ assimilation and soil respiration models are used for examining the dependence of the carbon dioxide budget on temperature. The ecosystem is found to function optimally given the present temperature conditions whereas either an increase or a decrease in temperature would reduce the ecosystem CO₂ accumulation. An increase in temperature by 5 °C would turn the ecosystem into a carbon dioxide source.     

Long-term measurements of boreal forest carbon balance reveal large temperature sensitivity

We present results from two years’ net ecosystem flux measurements above a boreal forest in central Sweden. Fluxes were measured with an eddy correlation system based on a sonic anemometer and a closed path CO₂ and H₂O gas analyser. The measurements show that the forest acted as a source during this period, and that the annual balance is highly sensitive to changes in temperature. The accumulated flux of carbon dioxide during the full two-year period was in the range 480–1600 g CO₂ m^–2. The broad range is caused by uncertainty regarding assessment of the night-time fluxes. Although annual mean temperature remained close to normal, the results are partly explained by higher than normal respiration, due to abnormal temperature distribution and reduced soil moisture during one growing season. The finding that a closed forest can be a source of carbon over such a long period as two years contrasts sharply with the common belief that forests are always carbon sinks.