蓝藻胞外多聚物生物合成、群体形成与微囊藻水华

有毒微囊藻水华在太湖、巢湖和滇池等饮用水源地频繁暴发, 对居民健康和水产养殖等构成严重威胁, 亟需开发新技术加以有效控制和利用。在水华暴发时, 蓝藻大量分泌胞外多聚物而形成细胞群体, 是蓝藻水华发生的关键和前提。蓝藻群体中胶质状胞外多聚物由胞外多糖、蛋白质和其他生物大分子组成, 对其结构、功能和生物合成途径研究了解仍然有限。生物信息学和比较基因组学分析发现微囊藻和其他多种蓝藻中编码大量的具有称之为PEP-CTERM结构域的潜在胞外蛋白质, 这些潜在的蛋白质可能通过特殊的分选系统分泌到细胞表面, 与胞外多糖相互作用形成结构更复杂的胞外多聚物, 介导细胞群体的形成和水华发生。亟需建立微囊藻遗传操作技术, 深入揭示胞外多聚物生物合成和群体形成的分子机制, 寻找控制蓝藻胞外多聚物的组装和分泌及群体形成的关键靶点, 将有助于揭示蓝藻水华形成机理及开发新型控藻技术。     

蓝藻的伪空泡及其对蓝藻在水体中垂直分布的调节

伪空泡广泛存在于浮游蓝藻中,其主要功能是为细胞提供浮力。具有伪空泡的蓝藻可通过浮力调节改变其在水柱中的位置,以适应水体中呈垂直方向分布的光照与营养的分离,从而有利于其从水体中获取有限的资源并最终成为优势种群。文章介绍了蓝藻伪空泡的物理化学特性和编码基因、蓝藻浮力调节机制及其研究方法。     

大型浅水富营养化湖泊中蓝藻水华形成机理的思考

湖泊富营养化依然是我国目前以及今后相当长一段时期内的重大水环境问题。研究蓝藻水华的形成机制 ,对于科学预测湖泊中蓝藻水华的产生 ,并采取相应措施减少其带来的影响具有重要的生态和环境意义。为探索富营养化湖泊中蓝藻水华形成机理 ,综述了目前对我国大型浅水湖泊蓝藻水华成因研究现状和对水华形成机理的一般认识。分析了导致蓝藻水华形成的化学、物理和生物等主要环境因素 ,论述了蓝藻 ,尤其是微囊藻成为水华优势种的可能原因。认为对水华的形成需要全面认识 ,营养盐浓度的升高可能仅是蓝藻水华形成、且人们可以加以控制的因素之一 ;在探索水华成因时 ,不能仅仅局限于夏季蓝藻水华发生时环境特征的研究与观察 ,而应该提前关注蓝藻的越冬生理生态特征、春季复苏的生态诱导因子及其阈值以及在复苏后 ,蓝藻如何在生长过程中形成群体 ,并逐步成为湖泊水生生态系统中的优势种乃至形成水华的过程。并需要对蓝藻越冬的生存对策、蓝藻群体的形成的条件、蓝藻在春季复苏的触发条件及其生态阈值、以及蓝藻在与其它藻类种群竞争中取胜的生理生化特征有足够的认识。蓝藻水华的“暴发”是表观现象 ,其前提还是藻类一定的生物量 ,且是一个逐渐形成的过程。根据生态学的基本理论和野外对水华形成过程的原位观测     

淡水湖泊浮游藻类对富营养化和气候变暖的响应

水体富营养化和气候变暖是淡水生态系统面临的两大威胁。文章分别阐述了富营养化和气候变暖对淡水湖泊浮游藻类直接和间接效应, 并总结气候变暖可能通过影响水体理化性质、水生植物组成、食物链结构从而直接或间接改变浮游藻类生物量或群落结构。作者重点分析了气候变暖下湖泊生态系统蓝藻水华暴发机制, 比较了不同湖泊蓝藻对气候变暖和富营养化响应的异同点, 发现气候变暖和富营养化对湖泊生态系统影响存在相似性, 表现在均促进湖泊由清水-浊水稳态转变、增加蓝藻水华发生频率和强度。然而二者对湖泊浮游藻类影响的相对重要性取决于分层型湖泊和混合型湖泊的差异性、不同营养型湖泊和不同类群蓝藻组成差异性。作者认为, 开展气候变暖和富营养化下, 湖泊浮游藻类功能群响应研究亟待进行。     

湖泊蓝藻水华发生机理研究进展

蓝藻水华是富营养化湖泊常见的生态灾害,通过产生毒素、死亡分解时使水体缺氧和破坏正常的食物网威胁到饮用水安全、公众健康和景观,会造成严重的经济损失和社会问题,揭示其发生机理是进行防治的基础。综述了蓝藻水华发生机理的主要假说和证据,主要分为环境因子(营养盐、氮磷比、温度、微量元素、浮游动物牧食、水文和气象条件等)和生理生态特性(伪空泡、胶质鞘、CO2浓缩机制、适应低光强、贮藏营养物质、防晒、产毒素和固氮等)两个方面;评述了主要新理论,展望了今后的研究。到目前为止的研究表明寻找一两个关键因子并不能阐明蓝藻水华的发生机理。现存的理论或假说尽管已经在蓝藻水华的防治实践中产生重要作用,但仍然未能清楚地阐释其发生的客观规律。认为蓝藻水华是在各种环境因子(外因)的耦合驱动下,水华蓝藻由于其独特的生理生态特性(内因),产生巨大的生物量而在浮游植物群落中占绝对优势,在合适的水文气象条件下集聚于水表而形成。因此水华机理的研究应同时关注水华蓝藻的生理生态学规律和蓝藻水华发生的各种环境条件。不同环境因子协同影响水华蓝藻的不同生理生态特性的表达,从而影响水华的发生过程,将可能是以后研究的重点。蓝藻水华机理的研究在微观方面正趋向于应用分子生物学手段分析蓝藻生理过程,宏观方面则将广泛应用遥感遥测技术观测全湖蓝藻的变化规律。今后加强对水华蓝藻生理生态特性的基因表达与调控和环境多因子耦合作用于蓝藻水华过程的研究将有重要意义。蓝藻水华的机理研究包括现象、过程和原因3个层次的问题,通过大量的现象和过程的研究,不断揭示其发生过程中水华蓝藻的群落演替、种群发展、细胞活性和分子机理等变化规律,才能找到其发生的真正原因,为其防治提供理论依据和更好的治理措施。在蓝藻水华防治方面,控制营养盐和生态修复可能将是今后很长时间内最根本最有效和最具操作性的方法。     

蓝藻胞外多糖的生态学意义及其工业应用

蓝藻能够合成胞外多糖并释放到细胞外围及周围环境中,这是其为适应复杂多变的环境而进化出的一种适应性机制.作为细胞与外界环境之间的保护性屏障,蓝藻胞外多糖可以起到抵抗干旱、紫外辐射、生物矿化和原生动物捕食等功能.蓝藻胞外多糖是一种酸性杂多糖,超过75％的多糖由6种以上单糖组成,葡萄糖是出现频率最高的单糖.胞外多糖的性质因种而异,多数蓝藻的胞外多糖呈现阴离子特性,这主要是由于糖醛酸和硫酸基团等带电基团的存在,硫酸基团同时也是多糖呈抗病毒特性的基础,而乙酰基团、缩氨酸部分及脱氧糖等疏水基团的存在使多糖呈乳化特性.因此,蓝藻胞外多糖在食品、化妆品、制药、污水处理等行业有广阔的应用前景.蓝藻胞外多糖的工业应用不仅能将水华蓝藻资源化,创造可观的经济效益,也能解决打捞蓝藻处置难题,避免随意堆放造成的二次污染.但截至目前,仍没有蓝藻胞外多糖类产品出现,理论研究与大批量工业生产之间仍然有很多技术性问题亟待解决.     

蓝藻群体颗粒驱动元素地球化学循环研究进展

在天然淡水和半咸水水体中,水华蓝藻常以群体颗粒的形态存在。在蓝藻群体颗粒中聚集着大量异养细菌,和蓝藻共同构成了具有独特生态功能的基本单元。与蓝藻单体细胞相比,蓝藻群体颗粒呈现出许多独有的特性,如内部丰富的有机质、急剧的氧化还原梯度、密切的种间互作关系等等。这些特质使得蓝藻群体颗粒在水体中成为元素地球化学循环的反应热点。同时,在蓝藻群体颗粒中也存在着远比单细胞藻类-浮游细菌之间更为密切的种间互作。本综述围绕蓝藻群体颗粒的这些特点,结合当前的研究进展,重点阐述蓝藻群体颗粒中的生物、生理、化学过程,讨论其驱动宏观生态现象的微观机制。未来蓝藻群体颗粒组学研究和多组学微生态数据库的构建或成为探索蓝藻群体颗粒中生命过程及揭示蓝藻水华暴发机制的突破口之一。     

集胞藻 PCC 6803中Sll0875蛋白参与调控光系统I活性的生物功能研究

叶绿醌是由1个萘醌环和1个半不饱和植基侧链组成的一类光系统Ⅰ（photosystem Ⅰ,PSⅠ）特有的辅因子。目前,在蓝藻中对其生物合成途径的研究主要集中在萘醌环的形成方面,而对其植基侧链的合成尚缺乏相关报道。本研究通过与近期在拟南芥中发现的1种催化植基单磷酸形成植基二磷酸的激酶（VTE6）进行同源序列比对,在集胞藻 PCC 6803中发现1个与之高度同源的蛋白质Sll0875。研究发现,在Sll0875缺失突变体中,叶绿醌和生育酚的含量缺失,叶绿素的含量降低（P<0.05）,且该突变体在无葡萄糖培养基中生长迟缓。进一步利用叶绿素荧光、P700氧化还原动力学、77K低温荧光光谱和免疫印迹分析等方法分析了该蛋白质的缺失对PSⅠ功能的影响。研究表明,在突变体Δsll0875中, PSⅠ活性下降,PSⅠ亚基含量与野生型相比显著降低（P<0.01）。这一结果表明,叶绿醌的缺失影响了PSⅠ复合物的累积,导致PSⅠ功能受损,从而影响了蓝藻正常的生长和发育。本研究在蓝藻中证实植醇磷酸化途径对叶绿醌合成的重要性,为进一步研究蓝藻中叶绿醌在PSⅠ复合物的合成、组装和稳定等过程中的作用奠定基础。     

也西湖噬藻体的分离与鉴定

【背景】噬藻体是一类特异性侵染蓝藻的病毒,广泛存在于淡水和海水水体中,参与调控宿主蓝藻的丰度和种群密度,被认为是潜在的蓝藻水华生物防控工具。但目前的研究多集中于海洋噬藻体,对淡水噬藻体的生物学特性和结构生物学等研究较少。【目的】分离更多种类的淡水噬藻体,为研究淡水噬藻体的三维结构、侵染机制、与宿主的共进化关系,及其在蓝藻水华防治中的应用提供理论基础。【方法】采集中国科学技术大学西校区内景观湖也西湖水华暴发水域的水样,利用液体培养基和双层固体平板法对17种宿主蓝藻进行筛选,通过NaCl-PEG沉淀法和氯化铯密度梯度离心分离和纯化噬藻体,并利用负染电镜观察噬藻体的形态,同时采用梯度稀释法测定裂解液的效价。【结果】发现也西湖的水样可特异性侵染本实验室分离自巢湖的一株拟鱼腥藻Pan。侵染后的裂解液中存在4株形态各异的噬藻体,包括1株短尾噬藻体和3株长尾噬藻体,其中包括首次发现的1株含有非典型长轴状头部结构的淡水噬藻体。【结论】也西湖作为巢湖流域的一个小型水体,具有与巢湖类似的水华蓝藻及其噬藻体分布谱,因此可以用于模拟大型湖泊进行相关分子生态学和生物防控的研究。     

微囊藻毒素生物合成基因及其功能研究进展

水体富营养化加剧,导致了蓝藻水华在世界范围内频发。蓝藻产生的微囊藻毒素是最常见的一种藻毒素,对人类和动物造成了很大的危害甚至导致死亡。微囊藻毒素经非核糖体合成途径由多肽合成酶合成。对微囊藻毒素的结构与性质、微囊藻毒素合成基因的功能及其生物合成、微囊藻毒素的分子生物学检测技术进行了评述,对未来的研究方向进行了展望。     

Functional analysis of the gas vesicle gene cluster of the halophilic archaeon Haloferax mediterranei defines the vac-region boundary and suggests a regulatory role for the gvpD gene or its product

A series of deletions introduced into the gvp gene cluster of Haloferax mediterranei, comprising 14 genes involved in gas vesicle synthesis (mc-vac-region), was investigated by transformation experiments. Gas vesicle production and the expression of the gvpA gene encoding the major gas vesicle protein, GvpA, was monitored in each Haloferax volcanii transformant. Whereas transformants containing the entire mc-vac-region produced gas vesicles (Vac+), various deletions in the region 5' to gvpA (encompassing gvpD-gvpM) or 3' to gvpA (containing gvpC, gvpN and gvpO) revealed Vac- transformants. All these transformants expressed gvpA and contained the 8 kDa GvpA protein as shown by Western analysis. However, transformants containing the gvpA gene by itself indicated a lower level of GvpA than observed with each of the other transformants. None of these transformants containing deletion constructs assembled the GvpA protein into gas vesicles. In contrast, transformants containing a construct carrying a 918 bp deletion internal to gvpD exhibited a tremendous gas vesicle overproduction, suggesting a regulatory role for the gvpD gene or its product. This is the first assignment of a functional role for one of the 13 halobacterial gvp genes found in addition to gvpA that are involved in the synthesis of this unique structure.     

Occurrence and distribution of gas vesicle genes among cyanobacteria.

Gas vesicles (GV) are specialized cell inclusions providing many aquatic procaryotes with buoyancy. In the cyanobacterium Calothrix sp. strain PCC 7601, at least four genes are involved in GV formation. One of those, gvpA1, encodes the major structural GV protein (70 amino acids) and belongs to a multigene family (gvpA1, gvpA2, gvpD). The fourth gene, gvpC, encodes a 162-amino-acid protein, the function of which is still unclear. We used the Calothrix gvpA1 and gvpC genes as probes to perform Southern hybridization experiments with DNA extracted from various cyanobacterial strains. The gvpA gene was found in all the strains that synthesize GV, indicating that its product is an obligatory component of GV. Furthermore, it was found to occur as multiple copies in most of the strains tested. The gvpC gene was only detected in some strains able to synthesize a large amount of GV within a short period. This suggests that the gvpC gene product is a dispensable protein for GV formation and is involved in the efficiency of the assembly process. Based on the occurrence of the gvp genes and on DNA-DNA hybridization patterns, genus assignments are discussed.     

Gas vesicles in actinomycetes?

Gas vesicles encoded by gvp genes provide buoyancy in many prokaryotes. In a recent Trends in Microbiology article entitled 'Gas vesicles in actinomycetes: old buoys in novel habitats?' van Keulen et al. documented the occurrence of gvp genes in soil-inhabiting actinomycetes but questioned whether any of them produce gas vesicles. We suggest that the protein encoded by gvpA in actinomycetes might be incompatible with the structure of the standard gas vesicle. Perhaps it has another role associated with the air-water interface.     

The diameter and critical collapse pressure of gas vesicles in Microcystis are correlated with GvpCs of different length

In cyanobacteria the protein on the outside of the gas vesicle, GvpC, is characterised by the presence of a 33 amino acid residue repeat (33RR), which in some genera is highly conserved. The number of 33RRs correlates with the diameter of the gas vesicle and inversely with its strength. Gas vesicles isolated from Microcystis aeruginosa strain PCC 7806 were found to be wider and have a lower critical collapse pressure than those from Microcystis sp. strain BC 8401. The entire gas-vesicle gene cluster of the latter strain was sequenced and compared with the published sequence of the former: the sequences of nine of the ten gvp genes differed by only 1-5% between the two strains; the only substantial difference was in gvpC which in strain BC 8401 lacked a 99-nucleotide section encoding a 33RR. This observation further narrows the correlation of gas vesicle width to the number of 33RRs and suggests how Microcystis strains might be used in experimental manipulation of gas vesicle width and strength.     

The homologies of gas vesicle proteins.

In addition to GvpA, the main structural protein, an SDS-soluble protein has been found in gas vesicles isolated from six different genera of cyanobacteria. N-terminal sequence analysis of the first 30 to 60 residues of the gel-purified proteins showed that they were homologous to GvpC, a protein that strengthens the gas vesicle in Anabaena flos-aquae. The proteins from some of the organisms showed rather low homology, however, and this may explain why the genes that encode them have not been found by Southern hybridization studies. The gas vesicles of another cyanobacterium, Dactylococcopsis salina, contained two SDS-soluble proteins (M(r) 17,000 and 35,000) that were identical in sequence for the first 24 residues but not thereafter; these two proteins showed no clear homology to GvpC. The sequence of GvpA, the main structural gas vesicle protein, was very similar in each of the organisms investigated. GvpA from the purple bacterium Amoebobacter pendens was different for the first 8 residues but 51 of the next 56 residues were identical to those of the cyanobacterial GvpA. Analysis of the GvpA and GvpC sequences provides support for the idea that the low diversity of GvpA reflects a high degree of conservation rather than a recent origin followed by lateral gene transfer between different bacteria.     

Gas vesicles.

The gas vesicle is a hollow structure made of protein. It usually has the form of a cylindrical tube closed by conical end caps. Gas vesicles occur in five phyla of the Bacteria and two groups of the Archaea, but they are mostly restricted to planktonic microorganisms, in which they provide buoyancy. By regulating their relative gas vesicle content aquatic microbes are able to perform vertical migrations. In slowly growing organisms such movements are made more efficiently than by swimming with flagella. The gas vesicle is impermeable to liquid water, but it is highly permeable to gases and is normally filled with air. It is a rigid structure of low compressibility, but it collapses flat under a certain critical pressure and buoyancy is then lost. Gas vesicles in different organisms vary in width, from 45 to > 200 nm; in accordance with engineering principles the narrower ones are stronger (have higher critical pressures) than wide ones, but they contain less gas space per wall volume and are therefore less efficient at providing buoyancy. A survey of gas-vacuolate cyanobacteria reveals that there has been natural selection for gas vesicles of the maximum width permitted by the pressure encountered in the natural environment, which is mainly determined by cell turgor pressure and water depth. Gas vesicle width is genetically determined, perhaps through the amino acid sequence of one of the constituent proteins. Up to 14 genes have been implicated in gas vesicle production, but so far the products of only two have been shown to be present in the gas vesicle: GvpA makes the ribs that form the structure, and GvpC binds to the outside of the ribs and stiffens the structure against collapse. The evolution of the gas vesicle is discussed in relation to the homologies of these proteins.     

Gas vesicles.

The gas vesicle is a hollow structure made of protein. It usually has the form of a cylindrical tube closed by conical end caps. Gas vesicles occur in five phyla of the Bacteria and two groups of the Archaea, but they are mostly restricted to planktonic microorganisms, in which they provide buoyancy. By regulating their relative gas vesicle content aquatic microbes are able to perform vertical migrations. In slowly growing organisms such movements are made more efficiently than by swimming with flagella. The gas vesicle is impermeable to liquid water, but it is highly permeable to gases and is normally filled with air. It is a rigid structure of low compressibility, but it collapses flat under a certain critical pressure and buoyancy is then lost. Gas vesicles in different organisms vary in width, from 45 to > 200 nm; in accordance with engineering principles the narrower ones are stronger (have higher critical pressures) than wide ones, but they contain less gas space per wall volume and are therefore less efficient at providing buoyancy. A survey of gas-vacuolate cyanobacteria reveals that there has been natural selection for gas vesicles of the maximum width permitted by the pressure encountered in the natural environment, which is mainly determined by cell turgor pressure and water depth. Gas vesicle width is genetically determined, perhaps through the amino acid sequence of one of the constituent proteins. Up to 14 genes have been implicated in gas vesicle production, but so far the products of only two have been shown to be present in the gas vesicle: GvpA makes the ribs that form the structure, and GvpC binds to the outside of the ribs and stiffens the structure against collapse. The evolution of the gas vesicle is discussed in relation to the homologies of these proteins.     

Complexity of gas vesicle biogenesis in Halobacterium sp. strain NRC-1: identification of five new proteins

The genome of Halobacterium sp. strain NRC-1 contains a large gene cluster, gvpMLKJIHGFEDACNO, that is both necessary and sufficient for the production of buoyant gas-filled vesicles. Due to the resistance of gas vesicles to solubilization, only the major gas vesicle protein GvpA and a single minor protein, GvpC, were previously detected. Here, we used immunoblotting analysis to probe for the presence of gas vesicle proteins corresponding to five additional gvp gene products. Polyclonal antisera were raised in rabbits against LacZ-GvpF, -GvpJ, and -GvpM fusion proteins and against synthetic 15-amino-acid peptides from GvpG and -L. Immunoblotting analysis was performed on cell lysates of wild-type Halobacterium sp. strain NRC-1, gas vesicle-deficient mutants, and purified gas vesicles, after purification of LacZ fusion antibodies on protein A and beta-galactosidase affinity columns. Our results show the presence of five new gas vesicle proteins (GvpF, GvpG, GvpJ, GvpL, and GvpM), bringing the total number of proteins identified in the organelles to seven. Two of the new gas vesicle proteins are similar to GvpA (GvpJ and GvpM), and two proteins contain predicted coiled-coil domains (GvpF and GvpL). GvpL exhibited a multiplet ladder on sodium dodecyl sulfate-polyacrylamide gels indicative of oligomerization and self-assembly. We discuss the possible functions of the newly discovered gas vesicle proteins in biogenesis of these unique prokaryotic flotation organelles.