Sulfate reduction and methanogenesis in the Shira and Shunet meromictic lakes (Khakasia, Russia)

The biogeochemical and molecular biological study of the chemocline and sediments of saline meromictic lakes Shira and Shunet (Khakasia, Russia) was performed. A marked increase in the rates of sulfate reduction and methanogenesis was revealed at the medium depths of the chemocline. The rates of these processes in the bottom sediments decreased with depth. The numbers of the members of domains Bacteria, Archaea, and of sulfate-reducing bacteria (SRB) were determined by fluorescence in situ hybridization with rRNA specific oligonucleotide probes labeled with horseradish peroxidase and subsequent tyramide signal amplification. In the chemocline, both the total microbial numbers and those of Bacteria were shown to increase with depth. The archaea and SRB were present in almost equal numbers. In the lake sediments, a drastic decrease in microbial numbers with depth was revealed. SRB were found to prevail in the upper sediment layer and archaea in the lower one. This finding correlated with the measured rates of sulfate reduction and methanogenesis.     

Sulfate reduction and methanogenesis in the Shira and Shunet meromictic lakes (Khakass Republic, Russia)

The biogeochemical and molecular biological study of the chemocline and sediments of saline meromictic lakes Shira and Shunet (Khakass Republic, Russia) was performed. A marked increase in the rates of sulfate reduction and methanogenesis was revealed at the medium depths of the chemocline. The rates of these processes in the bottom sediments decreased with depth. The numbers of Bacteria, Archaea, and of sulfate-reducing bacteria (SRB) were determined by fluorescence in situ hybridization with rRNA specific oligonucleotide probes labeled with horseradish peroxidase and subsequent tyramide signal amplification. In the chemocline, both the total microbial numbers and those of Bacteria were shown to increase with depth. The archaea and SRB were present in almost equal numbers. In the lake sediments, a drastic decrease in microbial numbers with depth was revealed. SRB were found to prevail in the upper sediment layer and archaea in the lower one. This finding correlates with the measured rates of sulfate reduction and methanogenesis.     

Densities and distribution of flagellates and ciliates in the chemocline of saline,meromictic Lake Shunet (Siberia,Russia)

The vertical and seasonal distributions of the phytoflagellate Cryptomonas spp., and its most common, the planktonic ciliate predators (Oligotrichida, Scuticociliatida, Hypotrichida and Prostomatida) were investigated in chemocline region of small saline, meromictic lake Shunet (Siberia, Russia) during 2003 and 2005. The lake has a pronounced chemocline, with abundance of purple and green sulphur bacteria. Vertical distribution of the Cryptomonas populations near the oxic/anoxic boundary layer was studied at close intervals in water sampled using a hydraulically operated thin-layer sampler. In both summer and winter, Cryptomonas peaked in water stratum 5–10 cm above anoxic zone or in the anoxic zone water column in the chemocline (about 5 m). Ciliate densities and biomass were also much higher in chemocline than in mixolimnion. The range of diurnal migration of Cryptomonas population was not very wide, and it was restricted to layers with high light intensity. The ciliates were sometimes detected above the upper border of the anoxic zone but also several centimetres below this zone.     

Copenhagen 1996-Variation in physical, chemical and biological components in the subantarctic lakes of South Georgia

Physical, chemical and biological variables were quantified in 19 subantarctic lakes (South Georgia) as a prelude to comparing these pristine systems with temperate lakes and to improve the knowledge of spatial and temporal variation in water chemistry and abundances of organisms. Lakes close to the sea had higher phosphorus concentrations, contained higher abundances of most organisms, and had higher number of invertebrate species than lakes situated further from the sea. Differences were attributed to higher nutrient input from marine organisms, such as penguins, seals and petrels, and probably also to a somewhat longer ice-free period. Since the lakes of South Georgia lack fish, the pelagic invertebrate fauna is dominated by herbivorous macrozooplankton. Rotifers are rare in the open water and are restricted to the vegetation (mainly mosses) in shallow areas and to the sediment surface. Generally, the algal abundance at the sediment surface is high in subantarctic lakes, indicating that the main part of the primary production is provided by benthic algae, which is in contrast to what is normally the case in temperate waters.     

Heterotrophic capability of a metalimnetic plankton population in saline Lake Shira (Siberia, Khakasia)

The heterotrophic potential of a deep (12 m) phytoplankton community layer in Lake Shira (Siberia), dominated by several taxa of cyanobacteria (Aphanocapsa, Lyngbya contorta, and other unidentified species) was investigated. The plankton community was fractionated by size, allowing separation between the bacterioplankton and the phytoplankton, and ¹³C-labelled organic compounds were used as tracers. The uptake of ¹³C-labelled glucose and of ¹³C-labelled glycine was maximal in the bacterioplankton-enriched fraction (¹³ C = 557 and 323, respectively), but was also high in the cyanobacterial fraction (¹³ C=138 and 80, respectively). An inverse relationship between the uptake of organic compounds and the light intensity when the whole community was exposed to different irradiances was also investigated. These results suggest that the photosynthetic microorganisms from the investigated community are able to assimilate organic compounds and thus supplement their carbon and energy requirements. This heterotrophic capability appears to be favoured by the high in situ concentrations of dissolved organic carbon (>15 mg C l^–1), and may offset the effects of severe light limitation on the phytoplankton in this deep, highly shaded environment.     

Microbial community of the chemocline of the meromictic Lake Shunet (Khakassia,Russia) during summer stratification

The spatio-temporal organization of the bacterial community inhabiting the chemocline of the stratified meromictic Lake Shunet (Khakassia, Russia) was investigated from May to September 2005 by means of microscopy, analysis of photosynthetic pigments, and PCR-DGGE with subsequent 16S rDNA analysis. The samples were collected with a multisyringe stratification sampler, sampling being performed every 5 cm. It was demonstrated that, during the period of investigation, there were no large changes in the bacterial community of the chlemocline, at least among the detected forms. During the whole period of study, purple sulfur bacteria related to Lamprocystis purpurea (Chromatiaceae) were predominant in the chemocline. Beneath the layer of purple bacteria, green sulfur bacteria were revealed that were phylogenetically distant from strain ShNPel02, which was previously isolated from this lake. Development of phytoflagellates of the genus Cryptomonas was observed in the upper zone of the chemocline. In the chemocline of Lake Shunet, the numbers of picoplankton cyanobacteria of the genus Synechococcus increased from May to September. It was demonstrated that the application of universal bacterial primers for DGGE resulted in the same qualitative distributional pattern of predominant species as microscopic studies.     

Oxygen concentration profiles in sediments of two ancient lakes: Lake Baikal (Siberia,Russia) and Lake Malawi (East Africa)

Oxygen concentration profiles have been measured, by means of with microelectrodes in sediments of Lake Baikal and Lake Malawi, along transects allowing to give a survey of two major ancient Rift lakes: Lake Baikal (Eastern Siberia) and Lake Malawi (East Africa), along depth transects in the constitutive basins of the lakes and/or of relevant depths with regard to oxygen (including including the deepest point, 1680 m, in Lake Baikal). Sediment oxygen penetration depths (SOPs) display very different patterns, depending on the lake in the two lakes. In Lake Baikal, SOPs are variable, show no significant relationship with bathymetric depth and are surprisingly deep on Akademichesky ridge (> 50.0 mm), emphasizing the distinctive feature of this region in the lake. While the Selenga river is an important source of eutrophication, the similarity of SOP-values in the Selenga shallow with those of most other sites suggests either a dilution of organic material by allochthonous matter, or a strong south-to-north transport of particles. In Lake Malawi, available oxygen is restricted to a maximum of three millimetres of the sediment, and there is a negative relationship with bathymetric depth, as a result of a steady decline of oxygen concentration with depth through the water column. Amongst the few parameters known to affect SOPs, the oxygen consumption by the sediment seems the most significant in both lakes. SOP-values furthermore confirm differences in the trophic status of Baikal and Malawi, respectively. The importance of oxygen as a factor likely to create ecological segregation for benthic organisms is discussed. Lake Malawi offers possibilities of bathymetric segregation but no vertical segregation in the sediment. In contrast, no bathymetric segregation related to oxygen is possible in Lake Baikal, but vertical segregation in the sediment is very likely. This revised version was published online in July 2006 with corrections to the Cover Date.     

Geographical, geological and hydrochemical distribution of saline lakes in Khakasia, Southern Siberia

There are over one hundred mineralized lakes in Khakasia with areas in excess of 0.01 km² including periodically dry lakes. These saline lakes are situated within the Chebakovo-Balakhtinskaya and Yuzhno-Minusinsk depressions of the Minusinsk intermontane trough, bounded by Kuznetsk Alatau, Western and Eastern Sayan mountains. The depressions are characterised by steppe landscape, low topographic relief and an arid climate (annual rainfall ca. 300 mm y^–1). The mineralisation of the various lakes ranges from some 2 to 150 g l^–1. Mg⁺⁺, Na⁺ and Ca⁺⁺ cations, SO₄⁼ and Cl^– anions dominate the composition of soluble salts. The degree of variation of the lakes' mineralisation increases in dry periods. The majority of lakes are associated with synclinal structures and terrigenous red-bed Upper Devonian clastic deposits which bear indicators of accumulation in an evaporite environment (the presence of gypsum layers). Some mineral lakes are situated in Carboniferous carbonate-terrigenous deposits, containing scattered pyroclastics and features of evaporite sedimentation. The high salinity of the lakes is explained (i) by the availability of readily soluble minerals in Palaeozoic strata (gypsum, anhydrite, halite and others), which may be dissolved in groundwater and transported to lake catchments, and (ii) by the high degree of surface water evaporation due to the arid climate. The mineralized waters of some lakes can be recommended for balneological purposes. A deterioration is noted in the ecological status of some saline lakes due to anthropogenic contamination.     

Winter limnology: a comparison of physical,chemical and biological characteristics in two temperate lakes during ice cover

The winter dynamics of several chemical, physical, and biological variables of a shallow, polymictic lake (Opinicon) are compared to those of a deep, nearby dimictic lake (Upper Rock) during ice cover (January to early April) in 1990 and 1991. Both lakes were weakly inversely thermally stratified. Dissolved oxygen concentration was at saturation (11–15 mg l⁻¹) in the top 3 m layer, but declined to near anoxic levels near the sediments. Dissolved oxygen concentrations in the deep lake were at saturation in most of the water column and approached anoxic levels near the sediments only. Nutrient concentrations in both lakes were fairly high, and similar in both lakes during ice cover. Total phosphorus concentrations generally ranged between 10–20 μg l⁻¹, NH₄-N between 16–100 μg l⁻¹, and DSi between 0.9–1.9 mg l⁻¹; these concentrations fell within summer ranges. NO₃-N concentrations were between 51–135 μg l⁻¹ during ice cover, but occurred at trace concentrations (<0.002 μg l⁻¹) during the summer. The winter phytoplankton community of both lakes was dominated by flagellates (cryptophytes, chrysophytes) and occasionally diatoms. Dinoflagellates, Cyanobacteria and green algae were poorly represented. Cryptophytes often occurred in fairly high proportions (20–80%) throughout the water column, whereas chrysophytes were more abundant just beneath the ice. Zooplankton population densities were extremely low during ice cover (compared to maximum densities measured in spring or summer) in both lakes, and were comprised largely of copepods.     

Effect of winter conditions on distributions of anoxic phototrophic bacteria in two meromictic lakes in Siberia,Russia

The year-to-year variations of vertical distribution and biomass of anoxic phototrophic bacteria were studied during ice periods 2003–2005 and 2007–2008 in meromictic lakes Shira and Shunet (Southern Siberia, Russian Federation). The bacterial layers in chemocline of both lakes were sampled with a thin-layer hydraulic multi-syringe sampler. In winter, biomass of purple sulphur bacteria varied considerably depending on the amount of light penetrating into the chemocline through the ice and snow cover. In relatively weakly stratified, brackish Shira Lake, the depth of chemocline varied between winters, so that light intensity for purple sulphur bacteria inhabiting this zone differed. In Shira Lake, increased transparency of mixolimnion in winter, high chemocline position and absence of snow resulted in light intensity and biomass of purple sulphur bacteria exceeding the summer values in the chemocline of the lake. We could monitor snow cover at the lake surface using remote sensing and therefore estimate dynamics and amount of light under ice and its availability for phototrophic organisms. In Shunet Lake, the light intensities in the chemocline and biomasses of purple sulphur bacteria were always lower in winter than in summer, but the biomasses of green sulphur bacteria were similar.     

A comparison of the fatty acid composition of Gammarus lacustris and its food sources from a freshwater reservoir, Bugach, and the saline Lake Shira in Siberia, Russia

We studied fatty acid (FA) composition in samples from bodies and intestinal contents of the littoral amphipod Gammarus lacustris Sars, from the Bugach freshwater reservoir. Simultaneously, samples of seston and bottom sediments were also collected from the reservoir during early August. There were no differences in FA composition of gut contents, seston and sediments of pebbly bottom. Seston was the main food source of Gammarus but some FAs Gammarus got from sediments. The FA composition of G. lacustris and seston from the Bugach freshwater reservoir were compared with those of the animals from the saltwater Lake Shira (Siberia). While FA composition of the two Gammarus populations differed significantly, those of seston were practically similar: the composition of long-chain unsaturated fatty acids, 20:53, 22:63 and 20:46, were significantly higher in animals from saline Shira Lake, whereas 16:1 and 16:0 were higher in the freshwater populations of amphipods from the Bugach freshwater reservoir. Taking into account the relevant literature data, we hypothesise that this difference in C16 acid might be a distinguishing characteristic of FA composition of freshwater and saltwater crustaceans.     

Phytoplankton, bacterial production and protozoan bacterivory in stratified, brackish-water Lake Shira (Khakasia, Siberia)

Rates of oxygenic and anoxygenic photosynthesis, chemoautotrophic and heterotrophic bacterial production and protozoan bacterivory were measured in the pelagic zone of the stratified brackish-water lake with the purpose to determine the vertical distribution of these processes and to estimate their significance in the functioning of planktonic community of the lake. In midsummer, total daily primary productivity was about 1.3 g C m^–2, of which 72% was produced by the phytoplankton, 24% by the chemoautotrophic bacteria, and only 4% by the phototrophic sulphur bacteria. Thus anoxygenic photosynthesis is a negligible source of organic matter in the lake. The production of heterotrophic bacteria averaged 1.5 g C m^–2 d^–1 and exceeded the total photosynthesis of phytoplankton and photosynthetic bacteria by a factor of 1.5. The estimated total primary production was too low to sustain the bacterial production. Probably the carbon cycle in the lake is dependent on the input of allochthonous organic matter. As a rule, the maximal rates of primary production and heterotrophic bacterial production were found in the chemocline or at the upper boundary of the chemocline. Heterotrophic flagellates dominated among the protozoan populations and were the major consumers of the bacterioplankton production in the lake. They showed maximal ingestion rates from 2.3 to 2.9 mg C m^–3 h^–1 at the upper boundary of the chemocline, where they consumed from 50 to 54% of the production of heterotrophic bacteria. Data obtained indicate that in Lake Shira the oxic-anoxic interface is the site of the most intensive production and mineralization of organic matter.     

Meromixis and Seasonal Dynamics of Vertical Structure of Lake Uchum (South Siberia)

The seasonal dynamics of the vertical structure of small saline Lake Uchum, located in the steppe arid zone of the south of Siberia (Krasnoyarsk krai), has been studied in detail for the first time. This lake is a meromictic water body. We have revealed a heterogeneous vertical distribution of plankton organisms and a dense population of purple sulfuric bacteria in the redox zone. The taxonomic composition and seasonal dynamics of phyto- and zooplankton are described. Presumably, the meromixis of Lake Uchum is due to the inflow of fresh water to the surface of the saline water body during the rise of its level in the early 20th century, similarly to lakes Shira and Shunet located nearby. The processes of salt displacement into the solution during the formation of ice, as well as the precipitation of salts in the winter, also contribute to the maintenance of permanent stratification. The information on the current state of the lake can be useful for reconstructing the climate by bottom sediments, as well as for creating a model of water quality and investigating the therapeutic properties of lake mud.     

Use of lakes by black duck broods in relation to biological,chemical, and physical features

Characteristics of 32 freshwater lakes in central and western Nova Scotia were quantified to determine the relative influence of various biological, chemical, and physical factors on habitat selection by black ducks (Anas rubripes Brewster) during brood-rearing. Acidity and trophic status varied greatly among the waterbodies, of which 20 were used by black ducks for rearing their young. Duck brood density was positively related to lake trophic status. The highest brood densities occurred on hypertrophic waterbodies with a large anthropogenic input of nutrients.Lakes with black duck broods had significantly higher concentrations of phosphorus and nitrogen, darker water with more dissolved organic carbon, and within the littoral zone, greater macrophyte cover, greater density and biomass of pelagic invertebrates, gentler slopes, and a softer, more organic substrate. Similar trends were observed within a subset of 17 acidic lakes (pH 5.5), 8 of which supported black ducks.The density of black duck broods was significantly correlated with 17 of 20 variables, most notably total phosphorus (r= + 0.81). Partial correlation (removing the effect of total phosphorus) revealed that brood density was significantly correlated with the abundances of pelagic (r= + 0.77) and benthic (r= + 0.68) invertebrates, macrophyte cover (r= + 0.52), and substrate score (r= + 0.57), but not with other chemical variables, including pH.Our results suggest that quality brood-rearing habitat is distinguished by a combination of factors, especially available nutrients, macrophyte cover, and invertebrates, subject to constraints imposed by physical characteristics of the littoral zone of the lake. The abundance of invertebrates, the primary food of young black ducks, emerged as the most important biological factor influencing the density of black duck broods.     

Data on the flora of bacillariophyta of Lake Shira (Khakassia,Russia)

This article deals with the results of the study of diatom algae of Lake Shira. The list of found algae contains 95 species (126, including infraspecific taxa). A brief ecological and geographical analysis of the algal flora is made.     

Seasonal and comparative aspects of chemical stratification in some tropical crater lakes, Ethiopia

SUMMARY. 1. Measurements of oxygen, pH, phosphate, nitrate, nitrite, hydroxylamine. ammonium and sulphide were made in four Ethiopian crater lakes during 1964, 1965 and 1966 at fairly regular intervals. The seasonal pattern of the dynamics of these chemical constituents is described for depth and time and relates closely to the pattern of thermal stratification and mixing previously described.
2. Interactions between the chemical constituents are examined and comparisons are made between the four lakes which differ widely in their depth, exposure to wind and standing crops of phytoplankton.
3. The vertical distribution of the chemical constituents is used to help define the limits of circulation of surface waters and the need to understand the seasonality of chemical stratification in relating climatic, morphometric and biological events, especially in tropical lakes, is stressed.     

Feeding spectra of <Emphasis Type="Italic">Arctodiaptomus salinus</Emphasis> (Calanoida,Copepoda) using fatty acid trophic markers in seston food in two salt lakes in South Siberia (Khakasia,Russia)

During two vegetation seasons (2004–2005), we compared feeding spectra of Arctodiaptomus salinus (Calanoida, Copepoda) populations inhabiting two neighboring salt lakes, Shira and Shunet, Khakasia, Russia, using fatty acid (FA) trophic markers. Sestonic FA composition in two lakes moderately differed, whereas levels of diatom FA markers were higher in Lake Shunet and of Cyanobacteria and green algae markers in Lake Shira. In general, markers in storage lipids—triacylglycerols (TAG) of A. salinus—reflected the differences in sestonic composition of the two lakes. Nevertheless, TAG fraction was also enriched by FA trophic markers of the minor components of seston, which were selectively ingested by the animals. In Lake Shira, A. salinus had significantly higher concentrations of bacterial FA markers in TAG. In Lake Shunet, TAG of A. salinus contained significantly higher relative amounts of 18:4ω3, 18:5ω3 and C22 polyunsaturated fatty acids (PUFA), which indicated marked contribution of cryptophytes or (and) flagellates into the diet. Laboratory experiments showed feeding on Cryptomonas and sulfur purple bacteria in Lake Shunet and ciliates and colonial picoplankton in both lakes, and generally confirmed the differences in FA trophic markers in A. salinus between the lakes. The two populations of A. salinus markedly differed in levels of essential long-chain PUFA, eicosapentaenoic (EPA) and docosahexaenoic (DHA) acids, although the levels of these FA in seston were quite similar between the two lakes. The higher levels of the essential ω3 PUFA in A. salinus in Lake Shunet may be an adaptive response of the animals to a vertical stratification of physico-chemical conditions and significantly higher salinity levels at the boundary of adjacent bottom layer in this lake.