Nucleotide sequence and evolution of the orangutan ε globin gene region and surrounding Alu repeats

Summary We have mapped and sequenced the globin gene and seven surrounding Alu repeat sequences in the orangutan globin gene cluster and have compared these and other orangutan sequences to orthologously related human sequences. Noncoding flanking and intron sequences, synonymous sites of , , and globin coding regions, and Alu sequences in human and orangutan diverge by 3.2%, 2.7%, and 3.7%, respectively. These values compare to 3.6% from DNA hybridizations and 3.4% from the globin gene region. If as suggested by fossil evidence and molecular clock calculations, human and orangutan lineages diverged about 10–15 MYA, the rate of noncoding DNA evolution in the two species is 1.0–1.5×10^–9 substitutions per site per year. We found no evidence for either the addition or deletion of Alu sequences from the globin gene cluster nor is there any evidence for recent concerted evolution among the Alu sequences examined. Both phylogenetic and phenetic distance analyses suggest that Alu sequences within the and globin gene clusters arose close to the time of simian and prosimian primate divergence (about 50–60 MYA). We conclude that Alu sequences have been evolving at the rate typical of noncoding DNA for the majority of primate history.Presented at the FEBS Symposium on Genome Organization and Evolution, held in Crete, Greece, September 1–5, 1986     

Production of cellulases and hemicellulases by an anaerobic mixed culture from lignocellulosic biomass

A comparison of different habitats, biogas plant, rumen fluid and sewage sludge, for cellulolytic organisms indicated sewage studge was the best source. Enrichment cultura gave a mixed culture which exhibited CMCase activity as well as extracellular Avicelase, xylanase, -glucosidase, -xylosidase activities and cell-bound -glucosidase, and -xylosidase production in a synthetic medium with eleven different cellulosic and lignocellulosic substrates. The activity of extracellular -glucosidase and -xylosidase production was significantly higher than endogenous activities. Hemicellulases were induced better than cellulases. The anzyme system was stable under aerobic conditions. Of the different lignocellulosic substrates, kallar grass was the best inducer of extracellular enzymes.

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Résumé La comparaison de différents habitats: digesteur méthanique, fluide du rumen ou boue de station d'épuration, pour leur contenu en organismes cellulolytiques, indiquent que la boue de station d'épuration est la meilleure source. Une culture par enrichissement a produit une culture mixte qui a exhibé aussi bien une activité CMCase que des activitiés extracellulaires avicelasique, xylanasique, -glucosidasique et -xylosidasique et qu'une production de -glucosidase et de -xylosidase liées à la cellule, dans un milieu synthétique et pour onze substrats cellulosiques et lignocellulosiques différents. L'activité de la -glucosidase extracellulaire et la production de -xylosidase sont significativement plus élevées que les activitiés endogènes. Les hemicellulases sont mieux induites que les cellulases. Le système enzymatique est stable dans des conditions aérobies. Parmi les divers substrats lignocellulosiques, l'herbe Kallar est le meilleur inducteur d'enzymes extracellufaires.

     

Die Wirkung einiger N-Verbindungen auf Mycelwachstum und Primordienbildung des Basidiomyceten Pleurotus spec. aus Florida

Zusammenfassung Die beste N-Quelle für das Mycelwachstum ist Harnstoff, gefolgt von Alanin, Arginin, Asparagin, Prolin und Phenylalanin.Für die Primordienbildung ist bei N-Applikation im Nährboden kein eindeutiges Resultat zu erhalten. Die Zahl der Anlagen und ihre Anordnung am Mycel variiert sehr stark je nach dem Stamm, der N-Quelle und dem Zeitpunkt, zu dem die Mycelien Fruktifikationsbedingungen bekommen. Werden die Testsubstanzen jedoch in einem Tropfen Pufferlösung zugesetzt, nachdem die Mycelien den optimalen Durchmesser erreicht haben, so ist Asparagin besonders gut. Beim Stamm M7 kann Arginin ebenso gut verwertet werden, aber erst 1,5–2 Tage später. Bei 42×11 ist nur das Asparagin eine adäquate N-Quelle. Alle übrigen Substanzen sind eindeutig schlechter, vor allem Phenylalanin und Prolin.Der optimale Durchmesser ist eine stammspezifische Größe. Er wird weder von der N-Ernährung noch von der Wachstumsgeschwindigkeit, noch dem absoluten Alter des Mycels beeinflußt. Bei ihm erscheinen die Primordien früher als bei kleineren oder größeren Mycelien. Mit der Tropfenmethode ist bei ihm außerdem die Primordienzahl besonders hoch und reproduzierbar.

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Effect of some N-compounds on growth of mycelium and formation of primordia in the basidiomycete Pleurotus spec. from Florida

Summary For mycelial growth, the best nitrogen source is urea followed by alanine, arginine, asparagine, proline and phenylalanine.For primordia formation no clear results can be obtained by addition of the nitrogen source in the medium. The number of fruiting body initials, as well as their arrangement on the mycelium varies to a large extent depending upon the particular strain, the N source and the time at which the mycelia have been given fruiting conditions. If, however, the test substances are added in a drop of buffer as soon as the mycelia have reached their optimal diameter, asparagine is most suitable. Strain M7 is able to use arginine to the same extent, although with a lag of 1.5 to 2 days. For 42×11 only asparagine is an adequate N source; all other substances tested are clearly less suitable especially phenylalanine and proline.The optimal diameter is a strain specific figure. It is not influenced by the nitrogen nutrition, the growth intensity or the absolute age of the mycelium. The primordia do develop earlier on mycelia with the optimal diameter than on smaller or larger ones. In addition, the number of primordia is very pronounced with the drop method and reproducible.

     

Immunocytochemical identification of neuroendocrine markers in human cardiac paraganglion — like structures

Summary Paraganglion-like structures (PLS) containing chromaffin-positive cells have been reported to be present in the adult human heart. The present work was initiated in order to evaluate the densitity of these structures in the interatrial septum and to study the presence of immunoreactivity of their cells to NSE and PGP 9,5 antibodies, two neuroendocrine markers. Six hundred 6-m paraffin serial sections were obtained from the upper third of the interatrial septum from six adult human hearts. From 2 to 12 paraganglia were found in each case, and their principal cells stained positively with NSE and PGP 9,5 antibodies. Depending on how these PLS related to other cardiac structures, four different types were identified: Type I — True paraganglia (located adjacent to ganglia or nerve fibers); Type II — Free paraganglia (immersed in the interatrial adipose tissue, without evident connection to other structures); Type III — Intraganglionic paraganglia (located within the nervous ganglia); Type IV — Intramyocardic paraganglia (small nests of immunoreactive cells closely related to myocardiocyte bundles). These cardiac paraganglia, which probably belong to the visceral-autonomic group, may have a role in the regulation of the cardiac function and in the adaptive mechanisms of the heart. Its is also possible that they originate functioning and non-functioning tumours.Work supported by grants from FINEP and CNPq (Brazil)     

Possible cases of relaxed selection in civilized populations

Summary Genetic traits which are disadvantageous or deleterious in primitive cultures, of hunters and food gatherers, have very low frequencies in almost all cases. There are a few special exceptions, such as the sickle cell trait. Some deleterious traits under genetic control are rare in primitive populations but have fairly high frequencies in populations with long histories or prehistories of civilization, such as Chinese, Japanese or European populations. The Darwinist might suggest that these traits have less selective disadvantage, that is, lower rates of selective elimination, in civilized habitats; i.e. that the various changes in habitat accompanying civilization have caused the rigor of natural selection to relax, in part or perhaps completely.Several cases are discussed of traits under genetic control or genetic influence which demonstrate this phenomenal contrast, between low frequencies among primitive populations and high frequencies among civilized populations. Population data are presented for 4 such cases: colorblindness, myopia, abnormality of the nasal septum and abnormally small external opening of the tear duct.

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Zusammenfassung Mit einigen bekannten Ausnahmen, z. B. Sichelzellanämie, kommen genetische Merkmale, die bei den Urvölkern von Jägern und Sammlern ungünstig oder sogar schädlich wirkten, mit niedriger Häufigkeit vor. Genetisch bedingte schädliche Merkmale, die selten unter Urvölkern gefunden werden, kommen jedoch häufiger vor bei Bevölkerungen, die eine lange Geschichte bzw. Vorgeschichte der Zivilisation besitzen, wie z. B. in China, Japan oder Europa. Ein Darwinist würde behaupten, daß bei zivilisierten Wohnorten solche Merkmale selektiv weniger nachteilig wirken, d. h., daß die selektive Ausscheidung langsamer vorgeht. Anders gesagt: der mit der Zivilisation verbundene Wechsel des Wohnortes bildet einen Grund für eine Milderung der Strenge der natürlichen Auslese.Es werden einige genetisch bestimmte oder genetisch beeinflußte Merkmale besprochen, die den Unterschied zwischen den Häufigkeiten (niedrig bei Urvölkern, hoch bei zivilisierten Völkern) aufzeigen,. Für 4 solcher Fälle: Farbensinnstörungen, Kurzsichtigkeit, Nasenscheidenwand-Deformitäten und anomale kleine Außenöffnungen der Tränenwege werden die Befunde aus den Bevölkerungen dargestellt.

     

Observations on the fine structure of the cercaria of Notocotylus attenuatus and formation of the cyst wall of the metacercaria

Summary The dorsal tegument of the mature cercaria of Notocotylus attenuatus is a syncytial, cytoplasmic layer, containing two types of secretory granule which are identifiable ultrastructurally. The type 1 secretory bodies are electron lucid, whereas most type 2 granules have a banded appearance. The ventral tegument contains granules which are secreted from the type 3 cells; the type 3 granules are membrane bound, electron dense, and consist of both an amorphous and a finely striated zone. The type 4 cells mainly contain cigar-shaped granules consisting of an amorphous core surrounded by concentric striations. The granules exhibit structural variability in shape and content. The type 4 cells undergo a cellular migration to the tegument during encystment. The structure of the posterior-lateral glands and mode of secretion of the granules are described. Possible functions of microtubules are discussed for each cell type. Details of some secretory processes involved in the formation of the hemispherical cyst wall are described. The layers of the cyst wall may be related to the granular contents of the various parenchymal cells of the cercaria. The tegument of the metacercaria originates primarily from the cytoplasm of the type 1, type 2, type 3 and type 4 cells.     

Infloreszenz- und Blütenentwicklung bei der KugeldistelEchinops exaltatus (Asteraceae)

InEchinops the flowers are surrounded by several scales and initiated in an acropetal and spiral succession on a cone-like inflorescence axis (Figs. 1–6). The floral organs originate in the following sequence: petals—stamens—carpels—pappus. The petals arise from a meristematic rim and therefore are already interconnected when they arise as primordia. This sympetalous zone remains rather inconspicuous for a long period, but eventually, the elongated corolla tube is formed through intercalary growth in a ring zone. Thereby, the stamens are moved upwards and form ledges on the corolla tube (Fig. 34). In the inferior ovary the usual zones of the typical angiospermous gynoecium can be distinguished, namely a synascidiate, symplicate and hemisymplicate zone. The ovule is borne on carpellary tissue.

     

Über das Zusammenwirken des erregenden und des hemmenden Neurons des M. abductor der Krebsschere beim Ablauf von Reflexen des myotatischen Typus

Zusammenfassung Eine speziell für die Verwendung in strömenden Körperflüssigkeiten konstruierte Caissonelektrode ermöglichte an dem zum Abduktor des Scherenfingers ziehenden Paar motorischer Axone die oszillographische Analyse der bei Reflexvorgängen eintretenden peripheren Interferenz von erregenden und hemmenden Impulsen. Werden mit dem Fingerglied der festgeklemmten Schere entsprechende kurze Bewegungen vorgenommen, so treten myotatische Reflexe auf, und die Aktionen der erwähnten 2 motorischen Ganglienzellen entsprechen dabei formell sehr weitgehend jenem Schema Sherringtons, durch welches für das spinale Säugerpräparat die — dortselbst intrazentral erfolgende — Umschaltung solcher Reflexvorgänge auf die gemeinsame Endstrecke aufgehellt wurde: Wir registrierten einerseits autogene, auf der Seite des gedehnten Muskels selbst eintretende Effekte (nämlich eine Streuentladung erregender Impulse, welche von einer kürzer dauernden, inversen Hemmeraktivierung begleitet ist) und anderseits die durch Dehnung des Antagonisten auszulösende reziproke Reaktion, welche aus einer Streuentladung von Hemmerimpulsen samt schwächerer inverser Aktivierung des Erregerneurons besteht. Für die am häufigsten auftretende Form der reflektorischen Antwort — die Streuentladung — darf als charakteristisch gelten, daß die Impulsfrequenz der im betreffenden Versuchstypus dominierenden, also eigentlich myotatischen Reaktion beinahe übergangslos auf durchschnittlieh 70 Hz emporstieg, um nach einem oder zwei entsprechend kurzen Intervallen (von z. B. 17 msec) zunächst auf mäßige Werte wie etwa 10–15 Hz abzusinken und dann früher oder später zu erlöschen.     

Human gamma X satellite DNA: an X chromosome specific centromeric DNA sequence

The cosmid clone, CX16-2D12, was previously localized to the centromeric region of the human X chromosome and shown to lack human X-specific satellite DNA. A 1.2 kb EcoRI fragment was subcloned from the CX16-2D12 cosmid and was named 2D12/E2. DNA sequencing revealed that this 1,205 bp fragment consisted of approximately five tandemly repeated DNA monomers of 220 bp. DNA sequence homology between the monomers of 2D12/E2 ranged from 72.8% to 78.6%. Interestingly, DNA sequence analysis of the 2D12/E2 clone displayed a change in monomer unit orientation between nucleotide positions 585–586 from a tail-to-head arrangement to a head-to-tail configuration. This may reflect the existence of at least one inversion within this repetitive DNA array in the centromeric region of the human X chromosome. The DNA consensus sequence derived from a compilation of these 220 bp monomers had approximately 62% DNA sequence similarity to the previously determined 8 satellite DNA consensus sequence. Comparison of the 2D12/E2 and 8 consensus sequences revealed a 20 bp DNA sequence that was well conserved in both DNA consensus sequences. Slot-blot analysis revealed that this repetitive DNA sequence comprises approximately 0.015% of the human genome, similar to that found with 8 satellite DNA. These observations suggest that this satellite DNA clone is derived from a subfamily of satellite DNA and is thus designated X satellite DNA. When genomic DNA from six unrelated males and two unrelated females was cut with SstI or HpaI and separated by pulsed-field gel electrophoresis, no restriction fragment length polymorphisms were observed for either X (2D12/E2) or 8 (50E4) probes. Fluorescence in situ hybridization localized the 2D12/E2 clone to the lateral sides of the primary constriction specifically on the human X chromosome.     

Micropropagation and ecorestoration of Vanda spathulata,an exquisite orchid

Node explants collected from flowering plants of Vanda spathulata, an endemic and exquisite orchid of Peninsular India and Sri Lanka, were cultured in Mitra medium with combinations of 4.4–88.8 m 6-benzyl adenine (BA) and 0.0–114.2 m indole-3-acetic acid (IAA). Combinations of 44.4 m BA with 17.1 or 28.5 m IAA and 66.6 mM BA with 28.5 or 40.0 m IAA induced maximum formation of 12.6 and 12.1 shoots / node, respectively, in a 6-month period. Subcultured nodal explants produced maximum of 6.1 shoots at combinations of 22.2–44.4 m 21 BA and 5.7–28.5 m IAA. Rooting of shoots occurred in medium containing 75 g l^–1 banana pulp and 5.7 m IAA within 3–9 weeks. Plantlets of 2–5 cm length possessing two to five roots established easily in community pots at 80–90% rates without hardening. Community potted plants introduced into forest segments at Ponmudi and Palode in Southern Western Ghats of India established at a rate of 50–70%.