拟南芥养分离子转运蛋白研究进展

养分离子的跨膜转运是细胞获取养分的重要环节,亦是植物在组织和器官水平上进行养分吸收运移的基础。文中综述了拟南芥中养分离子转运蛋白在基因克隆、序列与结构分析、功能鉴定、表达与调控方面的研究进展,其中着重讨论了这些转运蛋白在氮、磷和钾等营养元素吸收、运输、分配中的作用。     

植物中铵转运蛋白的研究进展

铵转运蛋白在众多生物中被克隆与鉴定,它是一种广泛存在于微生物、植物细胞及动物的细胞膜上主动转运铵离子的载体,分子量约为48kD,含有10～11个跨膜域.本文阐述了植物铵转运蛋白分离鉴定的过程,对于铵转运蛋白的结构、功能、基因表达调控等方面作了较详细叙述.不同氮素条件下,铵转运蛋白基因通过转录调控表现了对铵离子吸收转运的不同特点,使植物根系在较宽的浓度范围中吸收铵离子,为细胞内铵离子库的内稳态提供了理论依据.铵转运蛋白有助于作物更有效的吸收氮素,为农业生产粮食增收提供了有利保障.     

植物铜转运蛋白的结构和功能

铜(Cu)是植物必需的微量营养元素, 参与植物生长发育过程中的许多生理生化反应。Cu缺乏或过量都会影响植物的正常新陈代谢过程。因此, 植物需要一系列Cu转运蛋白协同作用以保持体内Cu离子的稳态平衡。通常, Cu转运蛋白可分为两类, 即吸收型Cu转运蛋白(如COPT、ZIP和YSL蛋白家族)和排出型Cu转运蛋白(如HMA蛋白家族), 主要负责Cu离子的跨膜转运及调节Cu离子的吸收和排出。然而, 最近有研究表明, 有些Cu伴侣蛋白家族可能是从Cu转运蛋白家族进化而来, 且它们在维持植物细胞Cu离子稳态平衡中也具重要功能。该文对Cu转运蛋白和Cu伴侣蛋白的表达、结构、定位及功能等研究进展进行综述。     

植物跨膜离子转运蛋白与其耐盐性关系研究进展

盐胁迫下植物吸收过多的N a ,使植物体内的离子平衡受到破坏,为了维持其正常生长细胞内的各种离子就必须保持平衡,而这一过程主要是由位于质膜和液泡膜上的离子转运蛋白完成的,并在植物耐盐性方面起关键作用。本文主要对响应盐胁迫的几种跨膜转运蛋白如:K /N a 离子转运蛋白、N a /H 逆向转运蛋白以及与其相关的H -ATPase等,在植物耐盐分子生物学方面的研究进展进行综述。     

植物重金属转运蛋白研究进展

土壤中的有毒重金属不仅对植物有害,也可通过食物链危害人类和动物的健康.重金属转运蛋白在植物吸收、抵抗重金属的复杂机制中起着关键作用.植物重金属转运蛋白分为吸收蛋白和排出蛋白,其中,吸收蛋白转运必需重金属进入细胞,同时也会因为必需重金属的缺乏或离子之间的竞争而运载有毒重金属;排出蛋白是一类解毒蛋白,可将过量的或有毒的重金属逆向转运出细胞,或区室化于液泡中.目前,细胞内多种重金属转运蛋白基因的转录水平与重金属离子积累之间的联系已被揭示,并分离克隆出诸多相关蛋白家族成员.本文综述了近年来发现并鉴定的主要重金属转运蛋白的金属亲和性、器官表达特异性及细胞内定位等的研究进展.     

高等植物Na+吸收、转运及细胞内Na+稳态平衡研究进展

盐胁迫是影响农业生产的重要环境因素之一。本文对植物Na 吸收的机制和途径、Na 在植物体内的长距离转运以及细胞内Na 稳态平衡的研究进展进行了概述。参与植物Na 吸收与转运的蛋白和通道可能包括HKT、LCT1、AKT和NSCC等。其中,HKT是植物体内普遍存在的一类转运蛋白,能够介导Na 的吸收,其结构中的带电氨基酸残基对于其离子选择性有着非常明显的影响。LCT1是从小麦中发现的一类能够介导低亲和性阳离子吸收的蛋白,然而在典型的土壤Ca2 浓度下LCT1并不能发挥吸收Na 的功能。AKT家族的成员在高盐环境下可能也参与了Na 的吸收。目前虽然还没有克隆到编码NSCC蛋白的基因,但是NSCC作为植物吸收Na 的主要途径的观点已被广泛接受。SOS1和HKT参与了Na 在根部与植株地上部的长距离转运过程,它们在木质部和韧皮部的Na 装载和卸载中发挥重要作用,从而影响植物的抗盐性。另外,由质膜Na /H 逆向转运蛋白SOS1、蛋白激酶SOS2以及Ca2 结合蛋白SOS3组成的SOS复合体对细胞的Na 稳态具有重要的调节作用,单子叶和双子叶植物之间的这种调节机制在结构和功能上具有保守性。SOS复合体与其它位于质膜或液泡膜上的Na /H 逆向转运蛋白以及H 泵一起调节着细胞的Na 稳态。     

高等植物Na+ 吸收、转运及细胞内Na+ 稳态平衡研究进展

盐胁迫是影响农业生产的重要环境因素之一。本文对植物Na+吸收的机制和途径、Na+在植物体内的长距离转运以及细胞内Na+稳态平衡的研究进展进行了概述。参与植物Na+吸收与转运的蛋白和通道可能包括HKT、LCT1、AKT和NSCC等。其中, HKT是植物体内普遍存在的一类转运蛋白, 能够介导Na+的吸收, 其结构中的带电氨基酸残基对于其离子选择性有着非常明显的影响。LCT1是从小麦中发现的一类能够介导低亲和性阳离子吸收的蛋白, 然而在典型的土壤Ca2+浓度下LCT1并不能发挥吸收Na+的功能。AKT家族的成员在高盐环境下可能也参与了Na+的吸收。目前虽然还没有克隆到编码NSCC蛋白的基因, 但是NSCC作为植物吸收Na+的主要途径的观点已被广泛接受。SOS1和HKT参与了Na+在根部与植株地上部的长距离转运过程, 它们在木质部和韧皮部的Na+装载和卸载中发挥重要作用, 从而影响植物的抗盐性。另外, 由质膜Na+/H+逆向转运蛋白SOS1、蛋白激酶SOS2以及Ca2+结合蛋白SOS3组成的SOS复合体对细胞的Na+稳态具有重要的调节作用, 单子叶和双子叶植物之间的这种调节机制在结构和功能上具有保守性。SOS复合体与其它位于质膜或液泡膜上的Na+/H+逆向转运蛋白以及H+泵一起调节着细胞的Na+稳态。     

锌离子、锌转运蛋白——细胞信号通路的新调控因子

锌(Zn)是人体内含量第二的必需微量金属元素,锌过量或缺失与多种发育缺陷和疾病发生高度相关。细胞内外锌离子转运及稳态维持主要依靠锌转运蛋白来实现。依据锌离子转运方向,锌转运蛋白分为ZIP和ZnT两个家族。锌离子和锌转运蛋白不仅能够作为重要的结构/催化因子调节相关蛋白(特别是酶)的活性,还可以作为信使广泛地参与多种细胞信号转导途径。而与其他功能相比,锌离子和锌转运蛋白作为信号调节因子的研究起步较晚,但近年来进展很快。该文聚焦于ZIP和ZnT家族成员,简要介绍其蛋白结构、分布位置、及转运机制等研究成果,重点总结近年来有关锌转运蛋白直接或间接地(通过调节胞内锌离子)调控细胞信号通路的分子机制的研究进展。     

跨膜离子转运蛋白与植物耐盐的分子生物学

植物抵御盐害的主要方式是增加Na 的外排、减少Na 的吸入和Na 的区隔化,而Na 的跨膜运输主要由质膜和液泡膜上的离子转运蛋白完成。对质膜和液泡膜跨膜离子转运蛋白包括K /Na 离子转运蛋白,Na /H 逆向转运蛋白以及液泡膜H -PPase的分子生物学研究及应用进展进行了综述。     

植物根毛的发生、发育及养分吸收

根毛是植物吸收养分的重要器官,认识根毛的发生、发育规律及其与养分吸收的关系,可为植物养分吸收效率的遗传改良提供依据。介绍了植物根毛的形态特性、发生和发育过程及其调控机制,并结合本实验室的工作,讨论了根毛对养分吸收的贡献、根毛受养分有效性的调节及其与其他根系形态构型性状间的关系,阐述了根毛中养分转运等植物营养过程及其生理和分子生物学基础。最后提出了关于根毛研究中的一些问题和研究前景。     

海南岛霸王岭热带低地雨林树木的空间格局

树木空间格局及其形成过程是物种共存及生物多样性维持机制研究的一个重要方面。该文以海南岛两个1 hm ²的典型热带低地雨林老龄林森林动态样地为基础, 通过4个点格局模型(均质Poisson过程、异质Poisson过程、均质Thomas过程和异质Thomas过程)模拟扩散限制和生境异质性作用对树木空间分布格局的影响, 并分析不同空间尺度下(< 2 m, 2-5 m, 5-10 m, 10-15 m, 15-20 m和20-25 m)不同作用的相对重要性。结果表明: 热带低地雨林的所有树木总体上呈现聚集分布的空间格局, 随着尺度的增大, 聚集强度逐渐减小。树种在模拟空间分布格局最优模型中的比例由高到低分别是: 均质Thomas过程, 均质Poisson过程、异质Thomas过程和异质Poisson过程。扩散限制作用是形成热带低地雨林树木空间分布格局最重要的生态过程, 其次是完全随机作用以及生境异质性和扩散限制的联合作用, 而生境异质性的作用最小。不同空间尺度上模拟各树种空间分布格局的最优模型比例差异显著, 扩散限制作用能够在多数空间尺度上模拟多个树种的空间分布格局, 其次为随机作用; 生境异质性和扩散限制的联合作用主要在小尺度(0-5 m)影响树种分布, 而生境异质性在较大尺度(15-25 m)上影响树种的空间分布格局。     

Modeling of purification operations in biotechnology: enabling process development, optimization, and scale-up

Process modeling involves the use of a set of mathematical equations to represent key physical phenomena involved in the process. An appropriately validated model can be used to predict process behavior with limited experimental data, identify critical ranges for process variables, and guide further process development. Although process modeling is extensively used in the chemical process industries, it has not been widely used in purification unit operations in biotechnology. Recent FDA guidelines encourage the use of process modeling during process development, along with multivariate statistical methods, detailed risk assessment, and other quantifiers of uncertainty. This paper will review recent advances in the modeling of key downstream unit operations: chromatography, filtration, and centrifugation. The focus will be on the application of modeling for industrial applications. Relevant papers presented at a session on this topic at the recent American Chemical Society National Meeting in San Francisco will also be reviewed.     

Use of glucose consumption rate (GCR) as a tool to monitor and control animal cell production processes in packed-bed bioreactors

For animal cell cultures growing in packed-bed bioreactors where cell number cannot be determined directly, there is a clear need to use indirect methods that are not based on cell counts in order to monitor and control the process. One option is to use the glucose consumption rate (GCR) of the culture as an indirect measure to monitor the process in bioreactors. This study was done on a packed-bed bioreactor process using recombinant CHO cells cultured on Fibra-Cel disk carriers in perfusion mode at high cell densities. A key step in the process is the switch of the process from the cell growth phase to the production phase triggered by a reduction of the temperature. In this system, we have used a GCR value of 300 g of glucose per kilogram of disks per day as a criterion for the switch. This paper will present results obtained in routine operations for the monitoring and control of an industrial process at pilot-scale. The process operated with this GCR-based strategy yielded consistent, reproducible process performance across numerous bioreactor runs performed on multiple production sites.     

Robust depth-based estimation in the time warping model

In functional data analysis, the time warping model aims at representing a set of curves exhibiting phase and amplitude variation with respect to a common continuous process. Many biological processes, when observed across the time among different individuals, fit into this concept. The observed curves are modeled as the composition of an "amplitude process," which governs the common behavior, and a "warping process" that induces time distortion among the individuals. We aim at characterizing the first one. Because of the phase variation present among the curves, classical sample statistics computed on the observed sample provide poor representations of the amplitude process. Existing methods to estimate the mean behavior of the amplitude process consist on aligning the curves, that is, eliminating time variation, before estimation. However, since they rely on the use of sample means, they are very sensitive to the presence of outliers. In this article, we propose the use of a functional depth-based median as a robust estimator of the central behavior of the amplitude process. We investigate its properties in the time warping model, and we evaluate its performance in different simulation studies where we compare it to existing estimators, and we show its robustness against atypical observations. Finally, we illustrate its use with real data on a yeast time course microarray data set.     

Scattering of polarized radio waves by Langmuir turbulence in a plasma in a magnetic field

A study is made of radio-wave scattering by Langmuir turbulent pulsations in a plasma in a magnetic field. The effect of this process on the polarization of radio waves at frequencies far above or close to the electron plasma frequency is investigated. The wave scattering by Langmuir turbulence is shown to strongly affect the polarization characteristics. When the optical thickness typical of the scattering process is on the order of unity, the degree of wave polarization can change by 30% both at high frequencies and at frequencies close to the plasma frequency, in which case the circular polarization can reverse direction. It is shown that, as a result of wave scattering by Langmuir turbulence, the degree of circular polarization of radio waves depends on the wavelength even in a uniform magnetic field.     

Autophagy and its physiological relevance in arthropods: Current knowledge and perspectives

Autophagic process is one of the best examples of a conserved mechanism of survival in eukaryotes. At the molecular level there are impressive similarities between unicellular and multicellular organisms, but there is increasing evidence that the same process may be used for different ends, i.e., survival or death, at least at cellular levels. Arthropods encompass a wide variety of invertebrates such as insects, crustaceans and spiders, and thus represent the taxon in which most of the investigations on autophagy in non-mammalian models are performed. The present review is focused on the genetic basis and the physiological meaning of the autophagic process on key models of arthropods. The involvement of autophagy in programmed cell death, especially during oogenesis and development, is also discussed.     

Relative growth rates of maxillary mesenchyme in the chick embryo

Chick embryos were injected with [3H]-thymidine at days 3-7 of incubation and were fixed and embedded in plastic. The embryos were divided into three stage groupings of development [Hamburger and Hamilton: J Morphol 88:49-92, 1951], and labeling indices were determined for each of the following delineated regions within the maxillary process at each stage: region 1, subepithelial mesenchyme located at the medial side of the maxillary process adjacent to the roof of the stomodeum; region 2, subepithelial mesenchyme at the ventral tip of the maxillary process (as seen on cross section); region 3, subepithelial mesenchyme at the lateral portion of the maxillary process below the eye; and region 4, interior mesenchyme defined as the central portion of the maxillary process and separated from the epithelium by the three other regions. Results indicated that differences exist among the regions examined and that these differences were stage specific. At stages 19-21 and stages 24-25 1/2, growth rates were higher in subepithelial regions than interiorly. At stages 28-29, however, a statistically significant difference among the regions was not found. These results suggested that there is an association between growth rates in the maxillary process mesenchyme and its proximity to the overlying epithelium and that these effects are related to the stage of development.     

基于零模型的宁夏荒漠草原优势种群点格局分析

植物种群空间分布格局是多种生态过程综合作用的结果。明确植物优势种群个体的空间分布格局与形成机制有助于认识种群生态适应对策与群落多样性维持机制。以宁夏荒漠草原优势种群蒙古冰草、短花针茅、牛枝子和牛心朴子为研究对象,采用完全空间随机零模型分析其种群空间分布格局特征,并通过异质泊松零模型与泊松聚块零模型探讨生境异质性、扩散限制等因子在其空间分布格局形成过程中的作用。结果显示:(1)完全空间随机零模型下,4个物种在4 m尺度范围内表现为聚集分布,随尺度增大,逐渐过渡到随机分布和均匀分布。(2)在排除生境异质性的异质泊松零模型下,蒙古冰草种群在整个研究尺度上表现为随机分布;牛枝子、短花针茅和牛心朴子种群仅分别在0—0.2、0.1—0.4 m与0—0.2 m尺度范围内发生偏离,表现为均匀分布与聚集分布,其他尺度均为随机分布。(3)在排除扩散限制的泊松聚块零模型下,所研究种群均表现为随机分布。综上,荒漠草原优势种群在小尺度范围内主要表现为聚集分布;生境异质性与扩散限制均是驱动其空间分布格局形成的重要因子,相对而言,小尺度空间范围内扩散限制的作用更为显著。     

Bootstrapping the Energy Flow in the Beginning of Life

This paper suggests that the energy flow on which all living structures depend only started up slowly, the low-energy, initial phase starting up a second, slightly more energetic phase, and so on. In this way, the build up of the energy flow follows a bootstrapping process similar to that found in the development of computers, the first generation making possible the calculations necessary for constructing the second one, etc. In the biogenetic upstart of an energy flow, non-metals in the lower periods of the Periodic Table of Elements would have constituted the most primitive systems, their operation being enhanced and later supplanted by elements in the higher periods that demand more energy. This bootstrapping process would put the development of the metabolisms based on the second period elements carbon, nitrogen and oxygen at the end of the evolutionary process rather than at, or even before, the biogenetic event.