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1.
Ma  Zhong  Walk  Thomas C.  Marcus  Andrew  Lynch  Jonathan P. 《Plant and Soil》2001,236(2):221-235
Low phosphorus availability regulates root hair growth in Arabidopsis by (1) increasing root hair length, (2) increasing root hair density, (3) decreasing the distance between the root tip and the point at which root hairs begin to emerge, and (4) increasing the number of epidermal cell files that bear hairs (trichoblasts). The coordinated regulation of these traits by phosphorus availability prompted us to speculate that they are synergistic, that is, that they have greater adaptive value in combination than they do in isolation. In this study, we explored this concept using a geometric model to evaluate the effect of varying root hair length (short, medium, and long), density (0, 24, 48, 72, 96, and 120 root hairs per mm of root length), tip to first root hair distance (0.5, 1, 2, and 4 mm), and number of trichoblast files (8 vs. 12) on phosphorus acquisition efficiency (PAE) in Arabidopsis. SimRoot, a dynamic three-dimensional geometric model of root growth and architecture, was used to simulate the growth of Arabidopsis roots with contrasting root hair parameters at three values of phosphorus diffusion coefficient (D e=1×10–7, 1×10–8, and 1×10–9 cm2 s–1) over time (20, 40, and 60 h). Depzone, a program that dynamically models nutrient diffusion to roots, was employed to estimate PAE and competition among root hairs. As D e decreased from 1×10–7 to 1×10–9 cm2 s–1, roots with longer root hairs and higher root hair densities had greater PAE than those with shorter and less dense root hairs. At D e=1×10–9 cm2 s–1, the PAE of root hairs at any given density was in the order of long hairs > medium length hairs > short hairs, and the maximum PAE occurred at density = 96 hairs mm–1 for both long and medium length hairs. This was due to greater competition among root hairs when they were short and dense. Competition over time decreased differences in PAE due to density, but the effect of length was maintained, as there was less competition among long hairs than short hairs. At high D e(1×10–7 cm2 s–1), competition among root hairs was greatest among long hairs and lowest among short hairs, and competition increased with increasing root hair densities. This led to a decrease in PAE as root hair length and density increased. PAE was also affected by the tip to first root hair distance. At low D e values, decreasing tip to first root hair distance increased PAE of long hairs more than that of short hairs, whereas at high D e values, decreasing tip to first root hair distance increased PAE of root hairs at low density but decreased PAE of long hairs at very high density. Our models confirmed the benefits of increasing root hair density by increasing the number of trichoblast files rather than decreasing the trichoblast length. The combined effects of all four root hair traits on phosphorus acquisition was 371% greater than their additive effects, demonstrating substantial morphological synergy. In conclusion, our data support the hypothesis that the responses of root hairs to low phosphorus availability are synergistic, which may account for their coordinated regulation.  相似文献   

2.
Abstract

We describe the statistical mechanics background and additional algorithmic features of a recently proposed simple mean-field Brownian Dynamics algorithm formulated to include many-body hydrodynamics, using a local density approximation for the friction coefficient. We show that the equations of motion satisfy the incompressibility of phase space. We make further developments to the model, computing the hydrodynamic effects on the shear stress relaxation function. We show that stress relaxation takes place over two well-defined regimes, in both cases with and without mean field hydrodynamics, MFH. At short times ta 2/D 0 < 10?3, where a is the radius of the colloidal particle and D 0 is the self-diffusion coefficient at infinite dilution, decay of the stress autocorrelation function, Cs(t) is essentially independent of volume fraction and does not fit to a simple analytic form. At longer times than ta 2/D 0 < 10?2 the decay has the fractional exponential form ~exp(-t β) with β ? 1. The transition between these two regimes coincides with a rapid fall in the time-dependent diffusion coefficient from the so-called short-time to long-time values. We do not find any evidence for power law decay in the Cs(t) as predicted by recent mode-coupling based analytical expansions.  相似文献   

3.
Influence of benthic organisms on solute transport in lake sediments   总被引:2,自引:2,他引:0  
Increased inputs of nutrients into the waters of Lake Okeechobee has raised concern that the lake is becoming hypereutrophic. One aspect in understanding the overall cycling and dynamics of the nutrients in the system is the effect of benthic organisms on solute transport. Various diffusional models have been used to approximate the effect of benthic organisms on solute transport within sediments using diffusion coefficient values which represent the pooled contributions of molecular diffusion (D s ) and enhanced solute mixing due to macrobenthos activity (D i ). The objective of this study was to investigate the impact of benthic activity on solute transport by measuringD s (i.e., no benthic activity) and an apparent-dispersion or mixing coefficientD m (i.e., with benthic activity) for the four major sediment types of Lake Okeechobee, Florida using a reservoir technique. This method involved monitoring the depletion of a conservative tracer (tritiated water) from the overlying water (reservoir) resulting from transport into sediments using disturbed sediments repacked in cores (3.2 cm diam.) and undisturbed cores (3.2 to 12 cm diam.) obtained from the lake. Additional estimates ofD m andD s were also obtained by measuring tracer concentration profiles in the sediment cores at the end of a specified diffusion period. Molecular diffusion coefficients (D s ) measured forrepacked cores of sand, littoral, mud and peat sediments ranged from 0.90 to 1.29 cm2 d−1, and estimates ofD s were slightly higher in undisturbed cores without benthic organisms.D m values for undisturbed cores of mud, sand and littoral sediments having macrobenthic populations ranged from 2.09 to 24.78 cm2 d−1; values that were 1.6 to 15 times higher than those in sediments without benthic activity. Undisturbed cores of varying diameter from mud sediments had similar estimates ofD m for tritium; however, the undisturbed cores with larger diameters from littoral sediments yielded larger estimates ofD m , reflecting the heterogeneity of benthic population densities and activity. Therefore,D s estimates may not adequately represent transport processes for mud, sand and littoral sediments of Lake Okeechobee; hence careful consideration should be given to the role of benthic organisms in the overall transport of solutes across the sediment-water interface. A contribution of the Florida Agricultural Experiment Station Journal Series No. R-01150. A contribution of the Florida Agricultural Experiment Station Journal Series No. R-01150.  相似文献   

4.
We studied the structural and dynamical properties of methane and ethane in montmorillonite (MMT) slit pore of sizes 10, 20 and 30 Å using grand canonical Monte Carlo and classical molecular dynamics (MD) simulations. The isotherm, at 298.15 K, is generated for pressures up to 60 bar. The molecules preferentially adsorb at the surface as indicated by the density profile. In case of methane, we observe only a single layer, at the pore wall, whose density increases with increasing pressure. However, ethane also displays a second layer, though of low density in case of pore widths 20 and 30 Å. In-plane self-diffusion coefficient, D, of methane and ethane is of the order of 10? 6 m2/s. At low pressure, D increases significantly with the pore size. However, D decreases rapidly with increasing pressure. Furthermore, the effect of pore size on D diminishes at high pressure. Ideal adsorbed solution theory is used to understand the adsorption behaviour of the binary mixture of methane (80%) and ethane (20%) at 298.15 K. Furthermore, we calculate the selectivity of the gases at various pressures of the mixture, and found high selectivity for ethane in MMT pores. However, selectivity of ethane decreases with increase in pressure or pore size.  相似文献   

5.
The translational and rotational dynamics of tobacco mosaic virus in sodium phosphate buffer (pH =7.5) solutions has been investigated by polarized and depolarized light scattering Rayleigh linewidth studies. For concentrations ranging from 1.75 × 10?4 g ml?1 to 0.25 × 10?4 g ml?1 the translational diffusion coefficient (DT) has been found to be slightly concentration dependent and extrapolation to zero concentration gives D020°C = 0.34 ± 0.01 × 10?7 cm2S?1. A full analysis of the polarized spectra obtained at high and low scattering angles and the depolarized spectra at near zero scattering angles has enabled these techniques to be compared and the rotational diffusion constant DR to be determined. At a solution concentration of 1.75 × 10?4 g ml?1 a mean value is found to be DR20°C = 350 ± 30s?1. These values of DT and DR are in approximate agreement with calculations based on models of the tobacco mosaic virus molecule as a cylindrical rod.  相似文献   

6.
The diffusion behavior of DNA samples of molecular weights between 1 × 106 and 25 × 106 Daltons was investigated under standard conditions at mean concentrations c? between 0.0009 and 0.017 g/dl. Special techniques described previously were used and supplemented. The sensitivity required was accomplished by multiple passage through the sample cells (effective path length of 10–45 cm) and application of the Gouy interference method. The maximum DNA refraction index difference has been determined more precisely from Gouy interference fringes by applying a systematic variation procedure and a linear-plot criterion. Convection was prevented by a temperature constancy better than 0.002°C/day, vibrationless operation, and by application of a slight density gradient of heavy water, which also improved the boundary-forming procedure. The corresponding optical HDO gradient was compensated. The concentration dependence of the DNA diffusion coefficient average DA was found to be positive and very small at extremely low concentrations, that is, below c? = 0.008 g/dl, for the sample of highest molecular weight investigated. With beginning penetration of different DNA molecules, DA increases markedly. The diffusion constant averages of our polydisperse samples will be corrected for monodisperse subfractions in a following paper. The resulting molecular weights M from diffusion and sedimentation constants (D0, s0) together with data from literature are the basis of new s0M, D0 ? M, and [η]–M relations for monodisperse DNA samples.  相似文献   

7.
We report Molecular Dynamics calculations of radial density profiles and self-diffusion coefficients of Lennard-Jones fluids in a cylindrical pore of radius 2σ, for a wide range of temperatures and densities. At n p σ3 = 0.825 the self-diffusion coefficient parallel to the pore walls D *. follows a monotonic (nearly linear) increase with kT/ε and is very similar to that of the bulk self-diffusion coefficient D b *. At n p σ3 = 0.4 and kT/ε ≤ 1.0 the curve of D * vs. kT/ε shows a distinct inflection in the region 0.7 ≤ kT/ε ≤ 0.9 and values of D * are much less than D b * decreasing to near solid state values at very low temperatures. At the highest temperature studied, kT/ε = 2.98, D * is almost inversely proportional to density and in a fairly close agreement with that of D b *. At KT/ε = 0.49, D * is much smaller than D b *. The motion of adsorbate particles normal to the walls is also discussed.  相似文献   

8.
Aims: To investigate the relationships between sulfate‐reducing bacteria (SRB), growth conditions, bentonite densities and copper sulfide generation under circumstances relevant to underground, high‐level radioactive waste repositories. Methods and Results: Experiments took place 450 m underground, connected under in situ pressure to groundwater containing SRB. The microbial reduction of sulfate to sulfide and subsequent corrosion of copper test plates buried in compacted bentonite were analysed using radioactive sulfur (35SO42?) as tracer. Mass distribution of copper sulfide on the plates indicated a diffusive process. The relationship between average diffusion coefficients (Ds) and tested density (ρ) was linear. Ds (m2 s?1) = ?0·004 × ρ (kg m?3) + 8·2, decreasing by 0·2 Ds units per 50 kg m?3 increase in density, from 1·2 × 10?11 m2 s?1 at 1750 kg m?3 to 0·2 × 10?11 m2 s?1 at 2000 kg m?3. Conclusions: It is possible that sulfide corrosion of waste canisters in future radioactive waste repositories depends mainly on sulfide concentration at the boundary between groundwater and the buffer, which in turn depends on SRB growth conditions (e.g., sulfate accessibility, carbon availability and electron donors) and geochemical parameters (e.g., presence of ferrous iron, which immobilizes sulfide). Maintaining high bentonite density is also important in mitigating canister corrosion. Significance and Impact of the Study: The sulfide diffusion coefficients can be used in safety calculations regarding waste canister corrosion. The work supports findings that microbial activity in compacted bentonite will be restricted. The study emphasizes the importance of growth conditions for sulfate reduction at the groundwater boundary of the bentonite buffer and linked sulfide production.  相似文献   

9.
The effects of the substrate conditions on the volumetric productivity of Lactobacillus helveticus at different cell densities up to 60 g l−1 in a continuous stirred-tank reactor with microfiltration to retain the biomass were investigated. At low dilution rates, D, the steady-state volumetric productivity, r p, gradually increased to a maximum at D = 1.2–1.5 h−1, because of reduced product inhibition. At higher D values, r p unexpectedly decreased, although the substrate conditions further improved. The maxima of r p at different cell densities coincided with a critical specific substrate utilization rate beyond which the cell metabolism seems to be controlled through a catabolic modulator factor, and r p decreases. Received: 8 September 1997 / Received last revision: 31 December 1997 / Accepted: 2 January 1998  相似文献   

10.
Abstract

Small molecule diffusion into Iota-Carrageenan gel was studied by using steady-state fluorescence (SSF) technique. Pyranine, dissolved in water was used as fluorescence probe. Fluorescence emission intensity, Ip, and scattered light intensity, Isc, were monitored to study diffusion and swelling processes at various temperatures respectively. Fickian and Li-Tanaka models were elaborated to produce diffusion, D, and collective diffusion, D 0, coefficients. Diffusion and swelling activation energies were also obtained and found to be 20.5 kj mol?1 and 28.2 kj mol?1, respectively.  相似文献   

11.
The anisotropic self-diffusion coefficient of 7Li+ (I = 3/2) counterions has been studied in hydrated, macroscopically oriented Li-(B)DNA fibers at relatively high water contents, corresponding to approximate DNA-DNA helix axis distances of 22–35 Å, using the pulsed field gradient hmr spin-echo method. Self-diffusion coefficients parallel (D) and perpendicular (D?) to the DNA helix axis increase with increasing salt content and with increasing DNA-DNA helix axis distance. The observed anisotropy D/D? decreases from 1.6 to 1.2 with the DNA-DNA separation increasing from 22 to 35 Å in the salt-free sample. This result can be understood by the obstruction effect caused by the DNA molecules themselves. The values of the Li+ self-diffusion coefficients in the most water-rich system with no added salt (corresponding to an approximate distance of 35 Å between the DNA helix axes) were D ~ 1.15 × 10?10 m2 s?1 and D? ~ 0.98 × 10?10 m2 s?1, compared to 9.14 × 10?10 m2 s?1 for the diffusion of Li+ in an aqueous solution of LiCl (~ 2.1M). The possible occurrence of restriction effects in the DNA fibers have also been studied by determining the self-diffusion coefficient at different effective diffusion times. The self-diffusion coefficient of Li+ in the sample with the largest DNA-DNA helix axis distance seems to be independent of the effective diffusion time, which indicates that the lithium ions are not trapped within impermeable barriers. The possibility of diffusion through permeable barriers has also been investigated, and is discussed. © 1994 John Wiley & Sons, Inc.  相似文献   

12.
The relationship between the sedimentation coefficient s0 and its concentration coefficient ks obtained in experiments on velocity sedimentation for polysaccharides is discussed. The values of s0, ks and an independently determined molecular weight reported by different authors for different polysaccharides are considered. It was established that the scaling relation. ks∼ s0 v unambiguously relates to the scaling relation s0∼ Mb. The values of the sedimentation parameter β s introduced on the basis of Svedberg's equation for s0 and on the basis of the expression ks = B 〈h23/2M–1 are discussed and the generalized Wales-van Holde-Rowe equation MKS = (NA/β S)3/2[s]3/2 kS 1/2 is used for evaluation of the molecular weights of polysaccharides. The adequacy of this evaluation is illustrated by taking as an example the determination of the unit length weight of an extra-rigid polysaccharide chain and of the equilibrium rigidity of rigid-chain, semi-rigid-chain and flexible-chain polysaccharides. The pair of experimental values s0 and kS obtained in a single series of experiments give the same information as may be obtained from the other pairs of hydrodynamic values such as [η] and s0 or [η] and D0, where [η] is the intrinsic viscosity and D0 is the translational diffusion coefficient. Accepted: 11 December 1996  相似文献   

13.
A synthetic model of photosynthesis-transpiration was established based on a comprehensive consideration of models of CO2 and H2O fluxes controlled by stomata of plant leaves.The synthetic model was developed by introducing the internal conductance to CO2 assimilation, gic, and the general equation of stomatal conductance model to H2O diffusion, gsw = g0+a1Amf(Ds)/(Cs-Γ), into models of CO2 and H2O diffusion through the plant leaves stomata. In the above expression, g0 and a1 are coefficients, Cs ambient CO2 concentration at leaf surface, Γ CO2 compensation point, and f(Ds) the general function describing the response of stomatal conductance to humidity. Using the data observed in maize (Zea mays L.) and soybean (Glycine max Merr.) plants grown in the field, the parameters in the model were identified, and the applicability of the model was examined. The verification indicated that the developed model could be used to estimate net assimilation rate, transpiration rate, and water use efficiency with a high enough level of precision. The examination also showed that when f(Ds) = hs or f(Ds) = (1+Ds/D0)−1 was employed, the estimation precision of the synthetic model was highest. In the study, the parameter gic was estimated by means of a linear function of QP because it was shown to be mostly correlated with photosynthetic photon flux, QP, among various environmental factors.  相似文献   

14.
The paper presents the results of X-ray source spatial distribution measurements of a low-inductance vacuum spark discharge based on the analysis of helium-like ions spectral lines structure. The intensities of spectral lines of FeXXV ions and dielectronic satellites with spatial resolution were measured. The polarization of satellite line 1s2p 2 2 D 5/2-1s 22p 2 P 3/2 was found. The obtained dependence of maximum plasma parameters during micropinch events from initial plasma line density in discharge corresponds to the radiative collapse model.  相似文献   

15.
以四川省新津文峰山马尾松(Pinus massoniana)人工林为研究对象,用典型抽样法探究5种林分密度(A:1000株/hm~2;B:1125株/hm~2;C:1250株/hm~2;D:1375株/hm~2;E:1500株/hm~2)对林下植被物种多样性和生物量的影响及林下植被物种多样性和生物量的相关性。结果显示:(1)共调查到植物124种,隶属于74科115属,灌木层物种少于草本层。(2)灌木或草本层在不同林分密度下的优势种都较一致。(3)灌木层物种丰富度指数D值、Shannon-Wiener多样性指数H值及草本层4个多样性指数均在密度B、E分别有最大和最小值;灌木层D值随密度增大而先增后减,其他3个指数变化规律不明显。灌、草层J_(sw)值较稳定。(4)灌木层生物量比草本层多。总体上灌、草层地上生物量大于地下生物量,都在密度B达最大;灌木地下生物量保持较稳定,而草本层变化幅度较大。(5)除灌木层J_(sw)值与该层各生物量呈负相关外,其余各指标均显示正相关。不同林分密度对马尾松林下植物多样性和生物量产生不同的影响,经综合研究分析认为,林分密度1125株/hm~2相对更利于该地马尾松人工林的可持续健康发展。  相似文献   

16.
We show that the persistence length a of DNA, derived from total intensity laser light scattering of linear Col E1 DNA and corrected for excluded-volume effects, varies from about 68 nm in 0.005M NaCl to about 40 nm in 0.2M NaCl, leveling off to a constant value (about 27 nm) at high NaCl (1–4M) concentration. These observations do not agree with current views on the effect of electrostatic charge and ionic conditions on DNA dimensions. The apparent diffusion constant Dapp, determined from laser light scattering autocorrelation as a function of scattering vector q, at NaCl concentrations 0.005–4M, correctly yields the translational diffusion coefficient Dt at low values of q and scales with molecular dimensions rather than segment length at high values of q; thus, Dapp/Dt yields a universal curve when plotted against q2R, where Rg is the radius of the gyration. The sedimentation coefficients s at 0.1 and 0.2M NaCl concentration closely agree with the well-tested empirical relations, and a combination of s, Dt, and the appropriate density increments yield correct molar masses over the whole salt concentration range. Approximate constancy of DtRg indicates limited draining in translational flow. We present some observations and thoughts on the regimes in which a dependence of the correlation decay times on q3 rather than q2 applies. We conclude that quasielastic laser light scattering discloses little information about dynamics of internal motion of DNA chains.  相似文献   

17.
Geotrichum klebahnii ATCC 42397 produces a protopectinase (PPase-SE) with polygalacturonase (PGase) activity. The microorganism was aerobically cultivated in synthetic media. Glucose, fructose and xylose yielded the highest enzyme levels (10–11 PGase units ml−1). Galacturonic acid repressed enzyme production and no growth was obtained with disaccharides and pectin. Specific enzyme activity obtained in an O2-limited culture was similar to that found in nonlimited ones. A growth yield (Y x/s) of 0.49 g of cell dry weight per gram of glucose consumed was obtained in a typical batch bioreactor culture. Enzyme production was growth associated, and no major products other than biomass and CO2 were detected. The volumetric enzyme activity reached a maximum around D=0.3–0.4 h−1 in glucose-limited continuous cultures. However, it varied strongly (together with microorganism morphology) even after retention times ≥8 at any D tested (0.035–0.44 h−1) though the rest of the culture variables remained fairly constant. No correlation between morphology and enzyme activity could be obtained. Enzyme production was poor in urea- and vitamin-limited continuous cultures. In all cases, biomass and CO2 accounted for ≅100% of carbon recovery though Y x/s values were different. Journal of Industrial Microbiology & Biotechnology (2000) 25, 260–265. Received 20 April 2000/ Accepted in revised form 15 September 2000  相似文献   

18.
A simple two‐chamber diffusion method was developed to study the diffusion properties of bacteriophages (phages). The apparent diffusion coefficients (Dapp) of Myoviridae phage T4 and filamentous phage fNEL were investigated, and the diffusion of the phages was found to be much slower than the diffusion of three antibiotics, ciprofloxacin, penicillin G, and tetracycline. Dapp of T4 and fNEL in water through filter paper were calculated to be 2.8 × 10?11 m2/s and 6.8 × 10?12 m2/s, respectively, and Dapp of fNEL through agarose gel membrane, an artificial biofilm, was also calculated to be smaller than that of T4. In addition, Dapp of phages through agarose gel was dependent on agarose concentration due to the similar size of phage and agarose gel mesh. We concluded that Dapp of phages through an artificial biofilm is dependent on both phage morphology and biofilm density, and suggest the use of this method to study diffusion properties through real biofilms. © 2010 American Institute of Chemical Engineers Biotechnol. Prog., 2010  相似文献   

19.
The design of improved processes for producing hydrogen sulphide (H2S)-rich natural gases faces a general scarcity of experimental data, because of the high toxicity and corrosive character of H2S. We present here a prospective application of Monte Carlo simulation to predict desired fluid properties.

A first step was the selection of intermolecular potentials for water, H2S, carbon dioxide (CO2) and methane on the basis of pure component properties (vapour pressures, vapourisation enthalpies, liquid densities, supercritical densities at high pressure). A second step involved the prediction of phase diagrams of binary and ternary mixtures of the methane–H2S–water system, using two-phase and three-phase Gibbs ensemble simulations. In a third step the density and excess enthalpy of the CO2–H2S system were computed for a large range of pressure, temperature and compositions.

Comparison with available experimental data showed that all investigated properties could be consistently predicted without needing parameter calibration on binary data. The results also provided a qualitative understanding of water solubility in H2S-rich fluids based on molecular self-association.  相似文献   

20.
Quasielastic light scattering methods were used to study calf thymus DNA in solutions of LiCl, NaCl, NH4Ac, and NH4Cl. Plots of the reciprocal relaxation time (1/τ) vs sin2(θ/2), where θ is the scattering angle, exhibit two linear regions, in accordance with theories for semiflexible polymers based on the t → 0 approximation. In these theories the slope of the linear region at low angles is associated with the translational diffusion coefficient (Dt), whereas the slope of the linear region at high angles is associated with the segmental diffusion coefficient (Ds = kT/?s). The midpoint of the “transition” between these two linear regions is associated with the mean displacement between segments (b). Data presented here indicate that the Rouse-Zimm parameters b and ?s are significantly different for DNA in 0.4M NH4Cl relative to the other salts at comparable ionic strengths. It is suggested that this difference reflects local solvent structure and that both b and Ds are sensitive to the local water structure.  相似文献   

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