微生物介导的碳氮循环过程对全球气候变化的响应

土壤是地球表层最为重要的碳库也是温室气体的源或汇。自工业革命以来,对土壤温室气体的容量、收支平衡和通量等已有较多研究和估算,但对关键过程及其源/汇的研究却十分有限。微生物是土壤碳氮转化的主要驱动者, 在生态系统碳氮循环过程中扮演重要的角色,对全球气候变化有着响应的响应、适应及反馈,然而其个体数量,群落结构和多样性如何与气候扰动相互关联、进而怎样影响生态系统过程的问题仍有待进一步探索。从微生物介导的碳氮循环过程入手,重点讨论微生物对气候变化包括温室气体(CO₂,CH₄,N₂O)增加、全球变暖、大气氮沉降等的响应和反馈,并由此提出削减温室气体排放的可能途径和今后发展的方向。     

The interactive effects of soil transplant into colder regions and cropping on soil microbiology and biogeochemistry

Soil transplant into warmer regions has been shown to alter soil microbiology. In contrast, little is known about the effects of soil transplant into colder regions, albeit that climate cooling has solicited attention in recent years. To address this question, we transplanted bare fallow soil over large transects from southern China (subtropical climate zone) to central (warm temperate climate zone) and northern China (cold temperate climate zone). After an adaptation period of 4 years, soil nitrogen components, microbial biomass and community structures were altered. However, the effects of soil transplant on microbial communities were dampened by maize cropping, unveiling a negative interaction between cropping and transplant. Further statistical analyses with Canonical correspondence analysis and Mantel tests unveiled annual average temperature, relative humidity, aboveground biomass, soil pH and NH₄⁺‐N content as environmental attributes closely correlated with microbial functional structures. In addition, average abundances of amoA‐AOA (ammonia‐oxidizing archaea) and amoA‐AOB (ammonia‐oxidizing bacteria) genes were significantly (P < 0.05) correlated with soil nitrification capacity, hence both AOA and AOB contributed to the soil functional process of nitrification. These results suggested that the soil nitrogen cycle was intimately linked with microbial community structure, and both were subjected to disturbance by soil transplant to colder regions and plant cropping.     

Elevated temperature shifts soil N cycling from microbial immobilization to enhanced mineralization,nitrification and denitrification across global terrestrial ecosystems

We assessed the response of soil microbial nitrogen (N) cycling and associated functional genes to elevated temperature at the global scale. A meta‐analysis of 1,270 observations from 134 publications indicated that elevated temperature decreased soil microbial biomass N and increased N mineralization rates, both in the presence and absence of plants. These findings infer that elevated temperature drives microbially mediated N cycling processes from dominance by anabolic to catabolic reaction processes. Elevated temperature increased soil nitrification and denitrification rates, leading to an increase in N₂O emissions of up to 227%, whether plants were present or not. Rates of N mineralization, denitrification and N₂O emission demonstrated significant positive relationships with rates of CO₂ emissions under elevated temperatures, suggesting that microbial N cycling processes were associated with enhanced microbial carbon (C) metabolism due to soil warming. The response in the abundance of relevant genes to elevated temperature was not always consistent with changes in N cycling processes. While elevated temperature increased the abundances of the nirS gene with plants and nosZ genes without plants, there was no effect on the abundances of the ammonia‐oxidizing archaea amoA gene, ammonia‐oxidizing bacteria amoA and nirK genes. This study provides the first global‐scale assessment demonstrating that elevated temperature shifts N cycling from microbial immobilization to enhanced mineralization, nitrification and denitrification in terrestrial ecosystems. These findings infer that elevated temperatures have a profound impact on global N cycling processes with implications of a positive feedback to global climate and emphasize the close linkage between soil microbial C and N cycling.     

Linking microbial community composition and soil processes in a California annual grassland and mixed-conifer forest

To investigate the potential role of microbial community composition in soil carbon and nitrogen cycling, we transplanted soil cores between a grassland and a conifer ecosystem in the Sierra Nevada California and measured soil process rates (N-mineralization, nitrous oxide and carbondioxide flux, nitrification potential), soil water and temperature, and microbial community parameters (PLFA and substrate utilization profiles) over a 2 year period. Our goal was to assess whether microbial community composition could be related to soil process rates independent of soil temperature and water content. We performed multiple regression analyses using microbial community parameters and soil water and temperature as X-variables and soil process rates and inorganic N concentrations as Y-variables. We found that field soil temperature had the strongest relationship with CO₂ production and soil NH₄⁺ concentration, while microbial community characteristics correlated with N₂O production, nitrification potential, gross N-mineralization, and soil NO₃^– concentration, independent of environmentalcontrollers. We observed a relationship between specific components of the microbial community (as determined by PLFA) and soil processes,particularly processes tightly linked to microbial phylogeny (e.g. nitrification). The most apparent change in microbial community composition in response to the 2 year transplant was a change in relative abundance of fungi (there was only one significant change in PLFA biomarkers for bacteria during 2 years). The relationship between microbial community composition and soil processes suggests that prediction of ecosystem response to environmental change may be improved by recognizing and accounting for changes in microbial community composition and physiological ecology.     

Responses of the functional structure of soil microbial community to livestock grazing in the Tibetan alpine grassland

Microbes play key roles in various biogeochemical processes, including carbon (C) and nitrogen (N) cycling. However, changes of microbial community at the functional gene level by livestock grazing, which is a global land‐use activity, remain unclear. Here we use a functional gene array, GeoChip 4.0, to examine the effects of free livestock grazing on the microbial community at an experimental site of Tibet, a region known to be very sensitive to anthropogenic perturbation and global warming. Our results showed that grazing changed microbial community functional structure, in addition to aboveground vegetation and soil geochemical properties. Further statistical tests showed that microbial community functional structures were closely correlated with environmental variables, and variations in microbial community functional structures were mainly controlled by aboveground vegetation, soil C/N ratio, and NH₄⁺‐N. In‐depth examination of N cycling genes showed that abundances of N mineralization and nitrification genes were increased at grazed sites, but denitrification and N‐reduction genes were decreased, suggesting that functional potentials of relevant bioprocesses were changed. Meanwhile, abundances of genes involved in methane cycling, C fixation, and degradation were decreased, which might be caused by vegetation removal and hence decrease in litter accumulation at grazed sites. In contrast, abundances of virulence, stress, and antibiotics resistance genes were increased because of the presence of livestock. In conclusion, these results indicated that soil microbial community functional structure was very sensitive to the impact of livestock grazing and revealed microbial functional potentials in regulating soil N and C cycling, supporting the necessity to include microbial components in evaluating the consequence of land‐use and/or climate changes.     

Mind the gap: non‐biological processes contributing to soil CO2 efflux

Widespread recognition of the importance of soil CO₂ efflux as a major source of CO₂ to the atmosphere has led to active research. A large soil respiration database and recent reviews have compiled data, methods, and current challenges. This study highlights some deficiencies for a proper understanding of soil CO₂ efflux focusing on processes of soil CO₂ production and transport that have not received enough attention in the current soil respiration literature. It has mostly been assumed that soil CO₂ efflux is the result of biological processes (i.e. soil respiration), but recent studies demonstrate that pedochemical and geological processes, such as geothermal and volcanic CO₂ degassing, are potentially important in some areas. Besides the microbial decomposition of litter, solar radiation is responsible for photodegradation or photochemical degradation of litter. Diffusion is considered to be the main mechanism of CO₂ transport in the soil, but changes in atmospheric pressure and thermal convection may also be important mechanisms driving soil CO₂ efflux greater than diffusion under certain conditions. Lateral fluxes of carbon as dissolved organic and inorganic carbon occur and may cause an underestimation of soil CO₂ efflux. Traditionally soil CO₂ efflux has been measured with accumulation chambers assuming that the main transport mechanism is diffusion. New techniques are available such as improved automated chambers, CO₂ concentration profiles and isotopic techniques that may help to elucidate the sources of carbon from soils. We need to develop specific and standardized methods for different CO₂ sources to quantify this flux on a global scale. Biogeochemical models should include biological and non‐biological CO₂ production processes before we can predict the response of soil CO₂ efflux to climate change. Improving our understanding of the processes involved in soil CO₂ efflux should be a research priority given the importance of this flux in the global carbon budget.     

Elevated atmospheric CO2 in open top chambers increases net nitrification and potential denitrification

The control of soil nitrogen (N) availability under elevated atmospheric CO₂ is central to predicting changes in ecosystem carbon (C) storage and primary productivity. The effects of elevated CO₂ on belowground processes have so far attracted limited research and they are assumed to be controlled by indirect effects through changes in plant physiology and chemistry. In this study, we investigated the effects of a 4‐year exposure to elevated CO₂ (ambient + 400 µmol mol^?1) in open top chambers under Scots pine (Pinus sylvestris L) seedlings on soil microbial processes of nitrification and denitrification. Potential denitrification (DP) and potential N₂O emissions were significantly higher in soils from the elevated CO₂ treatment, probably regulated indirectly by the changes in soil conditions (increased pH, C availability and NO₃^– production). Net N mineralization was mainly accounted for by nitrate production. Nitrate production was significantly larger for soil from the elevated CO₂ treatment in the field when incubated in the laboratory under elevated CO₂ (increase of 100%), but there was no effect when incubated under ambient CO₂. Net nitrate production of the soil originating from the ambient CO₂ treatment in the field was not influenced by laboratory incubation conditions. These results indicate that a direct effect of elevated atmospheric CO₂ on soil microbial processes might take place. We hypothesize that physiological adaptation or selection of nitrifiers could occur under elevated CO₂ through higher soil CO₂ concentrations. Alternatively, lower microbial NH₄ assimilation under elevated CO₂ might explain the higher net nitrification. We conclude that elevated atmospheric CO₂ has a major direct effect on the soil microbial processes of nitrification and denitrification despite generally higher soil CO₂ concentrations compared to atmospheric concentrations.     

A multiyear synthesis of soil respiration responses to elevated atmospheric CO2 from four forest FACE experiments

The rapidly rising concentration of atmospheric CO₂ has the potential to alter forest and global carbon cycles by altering important processes that occur in soil. Forest soils contain the largest and longest lived carbon pools in terrestrial ecosystems and are therefore extremely important to the land–atmosphere exchange of carbon and future climate. Soil respiration is a sensitive integrator of many soil processes that control carbon storage in soil, and is therefore a good metric of changes to soil carbon cycling. Here, we summarize soil respiration data from four forest free‐air carbon dioxide enrichment (FACE) experiments in developing and established forests that have been exposed to elevated atmospheric [CO₂] (168 μL L^?1 average enrichment) for 2–6 years. The sites have similar experimental design and use similar methodology (closed‐path infrared gas analyzers) to measure soil respiration, but differ in species composition of the respective forest communities. We found that elevated atmospheric [CO₂] stimulated soil respiration at all sites, and this response persisted for up to 6 years. Young developing stands experienced greater stimulation than did more established stands, increasing 39% and 16%, respectively, averaged over all years and communities. Further, at sites that had more than one community, we found that species composition of the dominant trees was a major controller of the absolute soil CO₂ efflux and the degree of stimulation from CO₂ enrichment. Interestingly, we found that the temperature sensitivity of bulk soil respiration appeared to be unaffected by elevated atmospheric CO₂. These findings suggest that stage of stand development and species composition should be explicitly accounted for when extrapolating results from elevated CO₂ experiments or modeling forest and global carbon cycles.     

Distinct responses of soil microbial communities to elevated CO2 and O3 in a soybean agro-ecosystem

The concentrations of atmospheric carbon dioxide (CO₂) and tropospheric ozone (O₃) have been rising due to human activities. However, little is known about how such increases influence soil microbial communities. We hypothesized that elevated CO₂ (eCO₂) and elevated O₃ (eO₃) would significantly affect the functional composition, structure and metabolic potential of soil microbial communities, and that various functional groups would respond to such atmospheric changes differentially. To test these hypotheses, we analyzed 96 soil samples from a soybean free-air CO₂ enrichment (SoyFACE) experimental site using a comprehensive functional gene microarray (GeoChip 3.0). The results showed the overall functional composition and structure of soil microbial communities shifted under eCO₂, eO₃ or eCO₂+eO₃. Key functional genes involved in carbon fixation and degradation, nitrogen fixation, denitrification and methane metabolism were stimulated under eCO₂, whereas those involved in N fixation, denitrification and N mineralization were suppressed under eO₃, resulting in the fact that the abundance of some eO₃-supressed genes was promoted to ambient, or eCO₂-induced levels by the interaction of eCO₂+eO₃. Such effects appeared distinct for each treatment and significantly correlated with soil properties and soybean yield. Overall, our analysis suggests possible mechanisms of microbial responses to global atmospheric change factors through the stimulation of C and N cycling by eCO₂, the inhibition of N functional processes by eO₃ and the interaction by eCO₂ and eO₃. This study provides new insights into our understanding of microbial functional processes in response to global atmospheric change in soybean agro-ecosystems.     

Effects of multiple global change treatments on soil N2O fluxes

Global environmental changes are expected to alter ecosystem carbon and nitrogen cycling, but the interactive effects of multiple simultaneous environmental changes are poorly understood. Effects of these changes on the production of nitrous oxide (N₂O), an important greenhouse gas, could accelerate climate change. We assessed the responses of soil N₂O fluxes to elevated CO₂, heat, altered precipitation, and enhanced nitrogen deposition, as well as their interactions, in an annual grassland at the Jasper Ridge Global Change Experiment (CA, USA). Measurements were conducted after 6, 7 and 8?years of treatments. Elevated precipitation increased N₂O efflux, especially in combination with added nitrogen and heat. Path analysis supported the idea that increased denitrification due to increased soil water content and higher labile carbon availability best explained increased N₂O efflux, with a smaller, indirect contribution from nitrification. In our data and across the literature, single-factor responses tended to overestimate interactive responses, except when global change was combined with disturbance by fire, in which case interactive effects were large. Thus, for chronic global environmental changes, higher order interactions dampened responses of N₂O efflux to multiple global environmental changes, but interactions were strongly positive when global change was combined with disturbance. Testing whether these responses are general should be a high priority for future research.     

Multiple models and experiments underscore large uncertainty in soil carbon dynamics

Soils contain more carbon than plants or the atmosphere, and sensitivities of soil organic carbon (SOC) stocks to changing climate and plant productivity are a major uncertainty in global carbon cycle projections. Despite a consensus that microbial degradation and mineral stabilization processes control SOC cycling, no systematic synthesis of long-term warming and litter addition experiments has been used to test process-based microbe-mineral SOC models. We explored SOC responses to warming and increased carbon inputs using a synthesis of 147 field manipulation experiments and five SOC models with different representations of microbial and mineral processes. Model projections diverged but encompassed a similar range of variability as the experimental results. Experimental measurements were insufficient to eliminate or validate individual model outcomes. While all models projected that CO₂ efflux would increase and SOC stocks would decline under warming, nearly one-third of experiments observed decreases in CO₂ flux and nearly half of experiments observed increases in SOC stocks under warming. Long-term measurements of C inputs to soil and their changes under warming are needed to reconcile modeled and observed patterns. Measurements separating the responses of mineral-protected and unprotected SOC fractions in manipulation experiments are needed to address key uncertainties in microbial degradation and mineral stabilization mechanisms. Integrating models with experimental design will allow targeting of these uncertainties and help to reconcile divergence among models to produce more confident projections of SOC responses to global changes.     

Global change could amplify fire effects on soil greenhouse gas emissions

Background

Little is known about the combined impacts of global environmental changes and ecological disturbances on ecosystem functioning, even though such combined impacts might play critical roles in shaping ecosystem processes that can in turn feed back to climate change, such as soil emissions of greenhouse gases.

Methodology/Principal Findings

We took advantage of an accidental, low-severity wildfire that burned part of a long-term global change experiment to investigate the interactive effects of a fire disturbance and increases in CO₂ concentration, precipitation and nitrogen supply on soil nitrous oxide (N₂O) emissions in a grassland ecosystem. We examined the responses of soil N₂O emissions, as well as the responses of the two main microbial processes contributing to soil N₂O production – nitrification and denitrification – and of their main drivers. We show that the fire disturbance greatly increased soil N₂O emissions over a three-year period, and that elevated CO₂ and enhanced nitrogen supply amplified fire effects on soil N₂O emissions: emissions increased by a factor of two with fire alone and by a factor of six under the combined influence of fire, elevated CO₂ and nitrogen. We also provide evidence that this response was caused by increased microbial denitrification, resulting from increased soil moisture and soil carbon and nitrogen availability in the burned and fertilized plots.

Conclusions/Significance

Our results indicate that the combined effects of fire and global environmental changes can exceed their effects in isolation, thereby creating unexpected feedbacks to soil greenhouse gas emissions. These findings highlight the need to further explore the impacts of ecological disturbances on ecosystem functioning in the context of global change if we wish to be able to model future soil greenhouse gas emissions with greater confidence.     

岷江上游华山松林冬季土壤呼吸对模拟增温的短期响应

冬季的土壤呼吸是生态系统呼吸的重要组成部分, 对气候变化的响应可能更为敏感。该文采用红外辐射加热器模拟土壤增温, 研究了岷江上游华山松(Pinus armandii)人工林冬季的土壤呼吸、微生物生物量及无机氮库对模拟增温的响应。结果表明: 在冬季(2009年11月-翌年3月), 模拟增温往往能显著提高土壤呼吸速率, 平均增幅达31.4%; 同样模拟增温使土壤微生物生物量碳、氮分别增加23.2%和22.7%, 而对微生物生物量碳氮比没有影响, 温度升高显著促进了微生物的生长, 但没有改变微生物的群落结构; 增温样地土壤的NO₃ ^--N和NH₄ ⁺-N浓度较对照分别增加了38.5%和12.3%, 增温显著提高了土壤的可溶性无机氮含量。综上所述, 该区针叶林冬季土壤呼吸、微生物生长和养分矿化对未来气候变暖非常敏感。     

The microbe-mediated mechanisms affecting topsoil carbon stock in Tibetan grasslands

Warming has been shown to cause soil carbon (C) loss in northern grasslands owing to accelerated microbial decomposition that offsets increased grass productivity. Yet, a multi-decadal survey indicated that the surface soil C stock in Tibetan alpine grasslands remained relatively stable. To investigate this inconsistency, we analyzed the feedback responses of soil microbial communities to simulated warming by soil transplant in Tibetan grasslands. Whereas microbial functional diversity decreased in response to warming, microbial community structure did not correlate with changes in temperature. The relative abundance of catabolic genes associated with nitrogen (N) and C cycling decreased with warming, most notably in genes encoding enzymes associated with more recalcitrant C substrates. By contrast, genes associated with C fixation increased in relative abundance. The relative abundance of genes associated with urease, glutamate dehydrogenase and ammonia monoxygenase (ureC, gdh and amoA) were significantly correlated with N₂O efflux. These results suggest that unlike arid/semiarid grasslands, Tibetan grasslands maintain negative feedback mechanisms that preserve terrestrial C and N pools. To examine whether these trends were applicable to the whole plateau, we included these measurements in a model and verified that topsoil C stocks remained relatively stable. Thus, by establishing linkages between microbial metabolic potential and soil biogeochemical processes, we conclude that long-term C loss in Tibetan grasslands is ameliorated by a reduction in microbial decomposition of recalcitrant C substrates.     

保护性耕作对东北黑土微生物碳循环功能基因的影响

土壤微生物既参与土壤有机碳的分解也是土壤有机碳转化和固定的驱动者,是影响土壤碳循环和有机碳稳定性的关键因素。然而,保护性耕作（秸秆还田）如何通过调节土壤微生物碳循环功能基因组成来影响土壤CO₂释放的机理尚不明确。因此,依托中国科学院东北地理与农业生态研究所长春保护性耕作观测站,借助鸟枪法宏基因组测序技术,分析了玉米连作系统不同耕作方式（免耕（NT）、秋翻（MP）以及常规耕作（CT））对土壤CO₂释放速率、碳水化合物活性酶（CAZy）、碳循环功能基因（碳固定、甲烷代谢以及碳水化合物代谢）组成的影响。研究表明：基于生长季节土壤CO₂释放速率6年平均值分析发现,生长季前期免耕土壤的平均CO₂释放速率显著低于秋翻和常规耕作,分别比秋翻低28%（5月份）、11%（6月份）和23%（7月份）;比常规耕作低31%（5月份）、19%（6月份）和7%（7月份）。基于CAZy数据库注释结果,发现耕作处理显著影响一些糖苷水解酶（如GH102、GH5_38和GH13_17）、糖基转移酶（如GT39）和多糖裂解酶（如PL17和PL5_1）的基因丰度,与常规耕作相比,秸秆还田的免耕和秋翻处理的这些差异基因的相对丰度较高。基于京都基因与基因组百科全书（KEGG）数据库注释结果,发现耕作方式显著影响土壤碳循环功能基因组成（Adonis,多元方差分析,R²=0.45;P=0.006）,且免耕处理土壤的碳固定、甲烷代谢以及碳水化合物代谢功能基因组成不同于常规耕作和秋翻处理,单独聚为一类。免耕土壤上调的碳固定功能基因的相对丰度（所有上调功能基因相对丰度的平均值）分别比常规耕作和秋翻高17%和11%,而下调的2个功能基因（K01007和K00170）的丰度分别低19%（CT）、21%（MP）和14%（CT）、17%（MP）。免耕土壤上调的甲烷代谢基因相对丰度分别较常规耕作和秋翻高15%和10%;下调基因的丰度分别低13%（CT）和11%（MP）。免耕土壤上调的碳水化合物代谢功能基因丰度较常规耕作和秋翻高23%和14%;下调的基因丰度分别低25%（CT）和18%（MP）。冗余分析（db-RDA）表明土壤容重及土壤水溶性有机碳（DOC）是驱动土壤碳循环功能基因组成差异的主要因子（P<0.05）,且免耕土壤上调的碳固定功能基因（K00625、K01676、K09709、K00925和K14470等）、甲烷代谢基因（K03520、K00830、K10713、K15633和K00625等）和碳水化合物代谢功能基因（K00886、K00830、K01676、K00117和K00114等）与土壤DOC、容重或含水量呈显著正相关。此外,研究发现土壤CO₂释放速率与土壤碳循环功能基因组成显著相关（R²=0.80;P<0.01）,尤其是与一些碳水化合物代谢功能基因显著相关。这些结果说明免耕处理通过影响土壤理化性质改变土壤碳循环过程,且推断免耕秸秆还田和减少干扰的叠加效应通过调节碳循环功能基因组成来提高土壤固碳潜力。     

Elevated CO2 increases nitrogen fixation and decreases soil nitrogen mineralization in Florida scrub oak

We report changes in nitrogen cycling in Florida scrub oak in response to elevated atmospheric CO₂ during the first 14 months of experimental treatment. Elevated CO₂ stimulated above-ground growth, nitrogen mass, and root nodule production of the nitrogen-fixing vine, Galactia elliottii Nuttall. During this period, elevated CO₂ reduced rates of gross nitrogen mineralization in soil, and resulted in lower recovery of nitrate on resin lysimeters. Elevated CO₂ did not alter nitrogen in the soil microbial biomass, but increased the specific rate of ammonium immobilization (NH₄⁺ immobilized per unit microbial N) measured over a 24-h period. Increased carbon input to soil through greater root growth combined with a decrease in the quality of that carbon in elevated CO₂ best explains these changes. These results demonstrate that atmospheric CO₂ concentration influences both the internal cycling of nitrogen (mineralization, immobilization, and nitrification) as well as the processes that regulate total ecosystem nitrogen mass (nitrogen fixation and nitrate leaching) in Florida coastal scrub oak. If these changes in nitrogen cycling are sustained, they could cause long-term feedbacks to the growth responses of plants to elevated CO₂. Greater nitrogen fixation and reduced leaching could stimulate nitrogen-limited plant growth by increasing the mass of labile nitrogen in the ecosystem. By contrast, reduced nitrogen mineralization and increased immobilization will restrict the supply rate of plant-available nitrogen, potentially reducing plant growth. Thus, the net feedback to plant growth will depend on the balance of these effects through time.     

模拟氮沉降和降雨对华西雨屏区常绿阔叶林土壤呼吸的影响

从2013年12月至2014年11月,通过野外原位试验,对华西雨屏区常绿阔叶林进行了模拟氮沉降和降雨试验,采用LI-8100土壤碳通量分析系统(LI-COR Inc.,USA)测定了对照(CK)、氮沉降(N)、减雨(R)、增雨(W)、氮沉降+减雨(NR)、氮沉降+增雨(NW)6个处理水平的土壤呼吸速率,并通过回归方程分析了温度和湿度与土壤呼吸速率间的关系。结果表明:(1)氮沉降和增雨抑制了常绿阔叶林土壤呼吸速率,减雨促进了常绿阔叶林土壤呼吸速率。(2)减雨使华西雨屏区常绿阔叶林土壤呼吸年通量增加了258 g/m~2,而模拟氮沉降和增雨使华西雨屏区常绿阔叶林土壤呼吸年通量分别减少了321g/m~2和406g/m~2。(3)减雨增加了土壤呼吸的温度敏感性,模拟氮沉降和增雨降低了土壤呼吸的温度敏感性。(4)模拟温度和湿度与土壤呼吸速率间回归方程分析表明,土壤水分对土壤呼吸速率的影响较小。(5)模拟氮沉降和增雨处理减少土壤微生物生物量碳、氮的含量,减雨处理增加了土壤微生物生物量碳、氮的含量。(6)模拟氮沉降和降雨对华西雨屏区土壤CO_2释放的影响未表现出明显的交互作用。     

Environmental effects on CO2 efflux from riparian tundra in the northern foothills of the Brooks Range,Alaska, USA

Summary Carbon dioxide efflux and soil microenvironmental factors were measured diurnally in Carex aquatilus-and Eriophorum angustifolium-dominated riparian tundra communities to determine the relative importance of soil environmental factors controlling ecosystem carbon dioxide exchange with the atmosphere. Measurements were made weekly between 18 June and 24 July 1990. Diurnal patterns in carbon dioxide efflux were best explained by changes in soil temperature, while seasonal changes in efflux were correlated with changes in depth to water table, depth to frozen soil and soil moisture. Carbon dioxide efflux rates were lowest early in the growing season when high water tables and low soil temperatures limited microbial and root activity. Individual rainfall events that raised the water table were found to strongly reduce carbon dioxide efflux. As the growing season progressed, rainfall was low and depth to water table and soil temperatures increased. In response, carbon dioxide efflux increased strongly, attaining rates late in the season of approximately 10 g CO₂ m^–2 day^–1. These rates are as high as maxima recorded for other arctic sites. A mathematical model is developed which demonstrates that soil temperature and depth to water table may be used as efficient predictors of ecosystem CO₂ efflux in this habitat. In parallel with the field measurements of CO₂ efflux, microbial respiration was studied in the laboratory as a function of temperature and water content. Estimates of microbial respiration per square meter under field conditions were made by adjusting for potential respiring soil volume as water table changed and using measured soil temperatures. The results indicate that the effect of these factors on microbial respiration may explain a large part of the diurnal and seasonal variation observed in CO₂ efflux. As in coastal tundra sites, environmental changes that alter water table depth in riparian tundra communities will have large effects on ecosystem CO₂ efflux and carbon balance.     

Global patterns and controlling factors of soil nitrification rate

Soil nitrification, an important pathway of nitrogen transformation in ecosystems, produces soil nitrate that influences net primary productivity, while the by‐product of nitrification, nitrous oxide, is a significant greenhouse gas. Although there have been many studies addressing the microbiology, physiology, and impacting environment factors of soil nitrification at local scales, there are very few studies on soil nitrification rate over large scales. We conducted a global synthesis on the patterns and controlling factors of soil nitrification rate normalized at 25°C by compiling 3,140 observations from 186 published articles across terrestrial ecosystems. Soil nitrification rate tended to decrease with increasing latitude, especially in the Northern Hemisphere, and varied largely with ecosystem types. The soil nitrification rate significantly increased with mean annual temperature (MAT), soil nitrogen content, microbial biomass carbon and nitrogen, soil ammonium, and soil pH, but decreased with soil carbon:nitrogen and carbon:nitrogen of microbial biomass. The total soil nitrogen content contributed the most to the variations of global soil nitrification rate (total coefficient = 0.29) in structural equation models. The microbial biomass nitrogen (MBN; total coefficient = 0.19) was nearly of equivalent importance relative to MAT (total coefficient = 0.25) and soil pH (total coefficient = 0.24) in determining soil nitrification rate, while soil nitrogen and pH influenced soil nitrification via changing soil MBN. Moreover, the emission of soil nitrous oxide was positively related to soil nitrification rate at a global scale. This synthesis will advance our current understanding on the mechanisms underlying large‐scale variations of soil nitrification and benefit the biogeochemical models in simulating global nitrogen cycling.     

Elevated temperatures and carbon dioxide concentrations: effects on selected microbial activities in temperate agricultural soils

Human activities have increased greenhouse gas concentrations in the atmosphere. Research has demonstrated this increased concentration will affect our climate by causing increases in temperature and altered weather patterns. The effects of climate change have been studied, including effects on some ecosystems throughout the world. There are studies that report changes in the soil due to climate change, but many did not extend their research to the microorganisms that inhabit soils. In our analysis of soil microorganisms that may be affected by climate change, two microbial outcomes emerged as having particular ecological and societal importance. Perturbations in the soil environment could lead to community shifts and altered metabolic activity in microorganisms involved in soil nutrient cycling, and to increasing or decreasing survival and virulence of soil-mediated pathogenic microorganisms. Alterations in CO₂ concentrations and temperature may alter soil respiration, soil carbon dynamics, and microbial community structure. Microbial-mediated processes that play an important role in the nitrogen cycle may also be influenced as a result of climate change. The potential for an increase in frequency of horizontal gene transfer due to changing climatic factors is of concern due to possible evolutionary changes in soil-borne pathogen populations, including the spread of virulence factors and genes that aid in environmental survival. We suggest that soil microbial communities in temperate agricultural systems continue to be researched for alterations to community structure, specifically the increase or decrease of soil activity and respiration, nitrification and denitrification, pathogen survival and alterations to horizontal gene transfer.