Two new species of <Emphasis Type="Italic">Mezilaurus</Emphasis> (Lauraceae) from Brazil

Ongoing taxonomic work on Mezilaurus has revealed two new species of the genus in Brazil, which are here described and illustrated. The first one, Mezilaurus glabriantha, from the state of Espírito Santo, represents the third endemic species known from the Brazilian Atlantic Forest, and Mezilaurus microphylla occurs in seasonally dry forests from the central Brazilian state of Tocantins. A key to distinguish the extra-Amazonian species of Mezilaurus from Brazil is provided.     

A remarkable new species of <Emphasis Type="Italic">Ormosia</Emphasis> (Leguminosae: Papilionoideae: Sophoreae) from Bahian Atlantic Rain Forest,Brazil

Ormosia timboënsis is described and illustrated as a new species based on fruit and leaf material collected in a fragment of Atlantic Rain Forest in central Bahia State, Brazil. This new species can be recognized by possessing the largest seed and hilum of those that have been reported in Ormosia. In addition, O. timboënsis has leaves that in combination with the fruit characters do not match any species currently described in the genus.     

Tracking the diversity of the flatworm genus <Emphasis Type="Italic">Imbira</Emphasis> (Platyhelminthes) in the Atlantic Forest

The genus Imbira Carbayo et al., 2013 encompasses two species, Imbira guaiana (Leal-Zanchet & Carbayo, 2001) and Imbira marcusi Carbayo et al., 2013, which occur in south Brazil, in areas originally covered by the Atlantic Forest. In the present study, we examine the genetic diversity within the genus, investigate the occurrence of molecular autapomorphies for its species and describe a new species for the genus based on an integrative approach. The Bayesian and maximum likelihood analyses based on DNA barcoding recovered the monophyly of the genus Imbira, but indicate that specimens representing I. marcusi correspond to five distinct lineages. These analyses, as well as sequence divergence data, revealed that the new species herein described is closely related to I. guaiana and that the specific status of specimens of I. marcusi available in GenBank should be reviewed. In addition, sequence analysis revealed 32 molecular autapomorphies for all independent evolutionary units within the genus. The new species described herein seems to be endemic to its type locality, a private area without legal protection.     

A geometric morphometric and microsatellite analyses of <Emphasis Type="Italic">Scaptotrigona mexicana</Emphasis> and <Emphasis Type="Italic">S. pectoralis</Emphasis> (Apidae: Meliponini) sheds light on the biodiversity of Mesoamerican stingless bees

Geometric morphometrics and molecular methods are effective tools to study the variability of stingless bee populations and species that merit protection given their worldwide decline. Based on previous evidence of cryptic lineages within the Scaptotrigona genus, we tested the existence of multiple evolutionary lineages within the species S. mexicana and we investigated the status of S. pectoralis. By analyzing their population structure, we found differences between the Pacific and Atlantic populations of each of these species, although geometric morphometrics of the wing only confirmed these results in S. mexicana. There was a tendency towards enhanced genetic differentiation over larger distances in the Atlantic populations of both species but not in the Pacific populations. These results revealed a pattern of differentiation among evolutionary units and a specific distribution of genetic diversity within these Scaptotrigona species in Mesoamerica, suggesting the need for future taxonomic revisions, as well as activities aimed at management and conservation.     

Molecular systematics of the critically-endangered North American spinymussels (Unionidae: <Emphasis Type="Italic">Elliptio</Emphasis> and <Emphasis Type="Italic">Pleurobema</Emphasis>) and description of <Emphasis Type="Italic">Parvaspina</Emphasis> gen. nov.

Despite being common in numerous marine bivalve lineages, lateral spines are extremely rare among freshwater bivalves (Bivalvia: Unionidae), with only three known species characterized by the presence of spines: Elliptio spinosa, Elliptio steinstansana, and Pleurobema collina. All three taxa are endemic to the Atlantic Slope of southeastern North America, critically endangered, and protected by the US Endangered Species Act. Currently, these species are recognized in two genera and remain a source of considerable taxonomic confusion. Because spines are rare in freshwater mussels and restricted to a small region of North America, we hypothesized that spinymussels represent a monophyletic group. We sequenced two mtDNA gene fragments (COI and ND1) and a fragment of the nuclear ITS-1 locus from >70 specimens. Bayesian and maximum-likelihood phylogenetic reconstructions suggest that the spinymussels do not comprise a monophyletic group. Elliptio steinstansana is sister to P. collina, forming a monophyletic clade that was estimated to have diverged from its most recent ancestor in the late Miocene and is distinct from both Elliptio and Pleurobema; we describe a new genus (Parvaspina gen. nov.) to reflect this relationship. Additionally, E. spinosa forms a monophyletic clade that diverged from members of the core Elliptio lineage in the mid-Pliocene. Furthermore, E. spinosa is genetically divergent from the other spinymussel species, suggesting that spines, while extremely rare in freshwater mussels worldwide, may have evolved independently in two bivalve lineages. Recognizing the genetic distinctiveness and inter-generic relationships of the spinymussels is an important first step towards effectively managing these imperiled species and lays the groundwork for future conservation genetics studies.     

Taxonomic and functional diversity in <Emphasis Type="Italic">Calogaya</Emphasis> (lichenised Ascomycota) in dry continental Asia

The genus Calogaya (Teloschistaceae, Xanthorioideae) was established to accommodate mainly epilithic lichens with lobate thalli, previously regarded as the “Caloplaca saxicola group.” Data supporting the recognition of this new genus came from European lichens, and although the genus is soundly based, we have found in Asia numerous epiphytic lineages and lineages with reduced, non-lobate thallus in dry continental areas. The taxonomic and functional diversity of Calogaya is distinctly higher in steppe and desert areas of Asia than in the less arid regions of Europe. We sampled 238 specimens, mostly from arid regions of north-western China, Iran, southern Siberia and Turkey. Three nuclear DNA loci were analysed separately and jointly by Bayesian inference, maximum likelihood and *BEAST approaches. Delimitations of 28 putative species were tested by BP&P multispecies coalescent model with joint analysis of species delimitation and species-tree estimation. Finally, we recognised 22 taxonomic units: 16 are at species rank, 3 are treated as subspecies and 3 are complexes, treated here as a single entity, but in reality probably including more than one species. Calogaya altynis, C. biatorina subsp. asiatica, C. decipiens subsp. esorediata, C. haloxylonis, C. orientalis, C. xanthoriella and C. xinjiangis are newly described. Caloplaca zoroasteriorum is combined into Calogaya, and Calogaya persica is reduced to a subspecies. The taxonomic status of Calogaya saxicola is unclear, and the name is employed here “sensu lato” for several non-monophyletic epilithic lineages with short-lobed thalli. Calogaya biatorina and C. ferrugineoides are the two other heterogeneous taxonomic units probably including more species.     

Genetic distinctiveness of the damselfly <Emphasis Type="Italic">Coenagrion puella</Emphasis> in North Africa: an overlooked and endangered taxon

North African odonates are facing conservation challenges, not only by increased degradation and loss of habitat, but also by having poorly understood taxonomy. Coenagrion puella is a widely distributed damselfly but there is debate about the taxonomic status of North African populations, where the species is very rare. We evaluate the genetic distinctiveness of North African C. puella using mitochondrial and nuclear genetic markers. We found a clear genetic differentiation between North African and European populations (3.4 % mtDNA) and a lack of shared haplotypes between individuals from the two continents. These results suggest that the damselfly C. puella comprises two genetically distinct phylogenetic lineages: one in Europe and one in North Africa, and re-invigorate the debate on the validity of the North African endemic C. puella kocheri. We propose that these two lineages of C. puella should be managed as distinct molecular operational taxonomic units. More generally, this study reinforces the important role of North Africa as centre of speciation and differentiation for odonates, and highlights the relevance of incorporating genetic data to understand the evolutionary history and taxonomy for effective biodiversity conservation.     

Stability or breakdown under climate change? A key group of woody bamboos will find suitable areas in its richness center

Bamboos play an important role in forest dynamics, but management strategies are needed to avoid monodominance. Understanding how climate change would influence the geographic distribution of bamboos could provide management tools for habitat conservation, as well as prevent the expansion of this group. We investigated the distribution patterns of Merostachys species that are endemic to the Brazilian Atlantic Forest, under current and future climate scenarios. We obtained occurrence records based on field collection, herbaria data and online databases. We used the Maxent algorithm to model potential distribution. Future scenarios considered the IPCC forecasted climate for 2070. Our models showed that a reduction in suitable areas for Merostachys species will likely occur, but the existence of suitable areas under climate changes in the Brazilian Atlantic Forest indicates climatic stability in some areas of occurrence of these species in their richness center. Since the fact that in places with local dominance of woody bamboos there is a decrease in the diversity of other plant species, the occurrence of Merostachys throughout the suitable areas may represent risks to biodiversity conservation. Investigations of the synergistic effects of climate change and the local dominance of woody bamboos are required. Therefore, management measures may be very important to control the occurrence of woody bamboos in the Brazilian Atlantic Forest, mainly in climatically stable areas.     

On the Three Enigmatic Species of <Emphasis Type="Italic">Acmaeodera</Emphasis> Eschscholtz from India and Pakistan in the Collection of Forest Research Institute in Dehradun (Coleoptera,Buprestidae: Polycestinae)

The taxonomic position of three enigmatic buprestid species: Acmaeodera kerremansi Stebbing, A. beesoni Obenberger, and A. gardneri Obenberger described from the “Upper Punjab” is discussed. Examination of the high resolution images of the type specimens of these species deposited in the National Forest Insect Collection (Forest Research Institute, Dehradun, India) has proved that all of them belong to the subgenus Lisposcelis Volkovitsh. Lectotype is designated for A. kerremansi. The putative synonymy of some recently described Indian acmaeoderine taxa is discussed. A list of all the known species of the subgenus Lisposcelis is provided.     

Phylogeography and historical demography of the orchid bee <Emphasis Type="Italic">Euglossa iopoecila</Emphasis>: signs of vicariant events associated to Quaternary climatic changes

The aim of this study was to investigate whether Pleistocene climatic instability influenced the phylogeographic structure and historical demography of an endemic Atlantic Forest (AF) orchid bee, Euglossa iopoecila Dressler, which shows two main patterns of integument colors over of its geographical distribution. We based our analysis on the concatenated sequence of four mtDNA segments belonging to genes 16S (357 bp), Cytb (651 bp) and COI (1206 bp), totaling 2234 bp. Samples of E. iopoecila populations were collected in 14 AF remnants along its geographic distribution. Median-Joining haplotype networks, SAMOVA and BAPS results indicated three lineages (southern, central and northern clusters) for E. iopoecila, with two important phylogeographic ruptures. We found higher genetic diversity among samples collected in the central region of the AF, which coincides with predicted areas of climatic stability, according to recent AF stability–extinction model. The demographic analysis suggests that only the southern cluster had undergone recent population expansion, which probably started after the last glacial maximum (LGM). Our data suggest that the differentiation observed in the three mitochondrial lineages of E. iopoecila is the result of past disconnections and multiple extinction/recolonization events involving climate fluctuations. In terms of conservation, we would emphasize the importance of considering: (1) the region of the central clade as the location of the highest genetic diversity of mtDNA of E. iopoecila populations; (2) the philopatric behavior of females that tends to restrict mtDNA gene flow in particular, with direct implications for the conservation of the total genetic diversity in euglossine populations.     

Two New Species of <Emphasis Type="Italic">Xenotarsonemus</Emphasis> (Acari: Tarsonemidae) from the Atlantic Forest,Brazil

Two new species, Xenotarsonemus quiriri n. sp. and Xenotarsonemus scorpius n. sp., are described and illustrated in this paper based on specimens collected on Myrtaceae plants in Atlantic Forest areas of the states of Bahia and Santa Catarina, Brazil. A key to identification of Xenotarsonemus species reported from Brazil is provided.     

Sympatric lineage divergence in cryptic Neotropical sweat bees (Hymenoptera: Halictidae: <Emphasis Type="Italic">Lasioglossum</Emphasis>)

Given ongoing biodiversity decline, an important concern is that a large fraction of species diversity is not yet documented. Correct delimitation of species remains a challenge, especially for small and morphologically uniform groups such as sweat bees (Halictidae). Here, we applied an integrative taxonomic approach to study diversity within the Neotropical sweat bee subgenus Dialictus (genus Lasioglossum). We used four statistical methods to delimit species based on cytochrome oxidase subunit I gene sequences: Automatic Barcode Gap Discovery (ABGD), two variants of the General Mixed Yule Coalescent (single-threshold (stGMYC) and Bayesian (bGMYC)) and the Refined Single Linkage analysis (RESL). We detected eight principal molecular operational taxonomic units (mOTUs). Subsequently, these lineages were evaluated using ten nuclear microsatellite loci and morphological and ecological analyses. Most mOTUs could be differentiated using microsatellites and morphology (82 % identified correctly), further supporting the status of mOTUs as independent biological units. For the two most widespread mOTUs, we analysed intra-lineage geographic variation using microsatellites but did not detect additional substructuring. We further tested if the lineages showed predictable patterns of co-occurrence and habitat preferences. While we did not find any evidence of preferential association or disassociation between taxa, we detected a slight positive effect of high crop cover favouring the abundance of some lineages. We show that integrated approaches using statistical analysis of DNA barcodes jointly with additional data can provide robust and objective means of delimiting species in morphologically difficult groups.     

Hybrid plants preserve unique genetic variation in the St Helena endemic trees <Emphasis Type="Italic">Commidendrum rotundifolium</Emphasis> DC Roxb. and <Emphasis Type="Italic">C. spurium</Emphasis> (G.Forst.) DC

The island of St Helena in the South Atlantic Ocean has a rich endemic flora, with 10 endemic genera and 45 recognised endemic species. However, populations of most endemic species have undergone dramatic reductions or extinction due to over-exploitation, habitat destruction and competition from invasive species. Consequently, endemic species are likely to have lost genetic variation, in some cases to extreme degrees. Here, the entire extant wild populations and all planted trees in seed orchards, of two critically endangered species in the endemic genus Commidendrum (Asteraceae), C. rotundifolium and C. spurium, were sampled to assess levels of genetic variation and inbreeding. Six new microsatellite loci were developed from next-generation sequence data, and a total of 190 samples were genotyped. Some seed orchard trees contained alleles from both wild C. rotundifolium and C. spurium indicating they could be hybrids and that some backcrossing may have occurred. Some of these trees were more similar to C. rotundifolium than C. spurium both genetically and morphologically. Importantly, allelic variation was detected in the putative hybrids that was not present in wild material. C. rotundifolium is represented by just two individuals one wild and one planted and C. spurium by seven, therefore the seed orchard trees comprise an important part of the total remaining genetic diversity in the genus Commidendrum.     

Genetic relationships of Chukchi charr <Emphasis Type="Italic">Salvelinus andriashevi</Emphasis> and Taranetz charr <Emphasis Type="Italic">Salvelinus taranetzi</Emphasis>

On the basis of sequence analysis of the mitochondrial DNA (mtDNA) control region (CR), cytochrome b (Cytb), and cytochrome oxidase-1 (CoI) genes, the relationships of endemic species Salvelinus andriashevi Berg, 1948, represented by the only population from Lake Estikhed (Chukotka), were estimated. The data on the genealogical analysis of mtDNA haplotypes supported phylogenetic closeness of S. andriashevi and S. taranetzi. It was also demonstrated that the specimens of Chukchi charr, along with Salvelinus sp. 4 (Lake Nachikinskoe), S. krogiusae (Lake Dal’nee), S. boganidae and S. elgyticus (Lake El’gygytgyn), and S. a. erythrinus from Canada’s Northwest Territories (NWT) belonged to the Arctic group of Taranetz charr. The problem of coincidence of taxonomic differentiation of charrs of the genus Salvelinus based on morphological and genetic analyses is discussed.     

Uncovered Diversity of a Predominantly Andean Butterfly Clade in the Brazilian Atlantic Forest: a Revision of the Genus <Emphasis Type="Italic">Praepedaliodes</Emphasis> Forster (Lepidoptera: Nymphalidae,Satyrinae, Satyrini)

The genus Praepedaliodes Forster, 1964, the only representative of the mega-diverse mostly Andean Pedaliodes complex lineage in the Brazilian Atlantic Forest, is revised. Prior to this study, four species were known, P. phanias (Hewitson, 1862), P. granulata (Butler, 1868), P. amussis (Thieme, 1905) and P. exul (Thieme, 1905). Here, a further six are described, all from SE Brazil, expanding to 10 the number of species in this genus. Lectotypes are designated for P. phanias, P. granulata and P. amussis. The genus is most diverse in the Serra da Mantiqueira (São Paulo, Rio de Janeiro, Minas Gerais) and in the Serra Geral (Paraná, Santa Catarina) with seven species occurring in both ranges. Praepedaliodes phanias is the most widespread species and the only one found in the western part of the Atlantic Forest; only this species and P. duartei Dias, Dolibaina & Pyrcz n. sp. occurring to near sea level. Other species, P. zaccae Dolibaina, Dias & Pyrcz n. sp., P. francinii Freitas & Pyrcz n. sp., P. sequeirae Pyrcz, Dias & Dolbaina n. sp., P. landryi Pyrcz & Freitas n. sp. and P. pawlaki Pyrcz & Boyer n. sp. are strictly montane and the highest species richness is reached at 1400–1800 m. One species, P. sequeirae n. sp., is a narrow endemic found only at timberline in the Agulhas Negras massif above 2300 m. Immature stages are described for two species, P. phanias and P. landryi n. sp. Molecular data (barcode region of cytochrome oxidase, subunit I) and adult morphology, including male and female genitalia, support the genus as monophyletic, belonging to a predominantly Andean clade of the Pedaliodes Butler, 1867 complex. Morphological evidences, in particular female genitalia comparative analysis, indicate the genera Physcopedaliodes Forster, 1964 and Panyapedaliodes Forster, 1964 as possibly the closest relatives to Praepedaliodes. Molecular data are inconclusive in this respect.     

Evolutionary diversification of Western Atlantic <Emphasis Type="Italic">Bathygobius</Emphasis> species based on cytogenetic,morphologic and DNA barcode data

A number of fish groups, such as Gobiidae, are highly diversified and taxonomically complex. Extensive efforts are necessary to elucidate their cryptic diversity, since questions often arise about the phylogenetic aspects of new species. Clarifications about the diversity and phylogeny of the Bathygobius species from the southwestern Atlantic are particularly needed. Evidence has been accumulating on the Brazilian coast regarding the possible presence of new species while doubts remain about the taxonomic status of others. The taxonomic identification of some species of Bathygobius has been problematic, given their generally conservative external morphology, and several species are recognized as cryptic. This situation hinders understanding the real diversity in this taxon. Taken together, genetic, cytogenetic and morphometric analyses have been effective in identifying new species of this genus. Here we describe the karyotypic features and morphological patterns of three Western South Atlantic species of Bathygobius. Furthermore, its cytochrome c oxidase I (COI) gene sequences were compared with those of species from Central America, North America and the Caribbean. The broad analyses performed demonstrated an unsuspected diversity, leading to the identification of an un-described new species (Bathygobius sp.2) and the geographic redefinition of another, Bathygobius sp.1, undoubtedly a branch of B. geminatus, hitherto inaccurately identified as B. mystacium on the coast of Brazil.