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1.
Sapovirus (SaV), a member of the family Caliciviridae, is an important cause of acute epidemic gastroenteritis in humans. Human SaV is genetically and antigenically diverse and can be classified into four genogroups (GI, GII, GIV, and GV) and 16 genotypes (7 GI [GI.1–7], 7 GII, [GII.1–7], 1 GIV and 1 GV), based on capsid sequence similarities. Monoclonal antibodies (MAbs) are powerful tools for examining viruses and proteins. PAI myeloma cells were fused with spleen cells from mice immunized with a single type of recombinant human SaV virus‐like particles (VLPs) (GI.1, GI.5, GI.6, GII.3, GIV, or GV). Sixty‐five hybrid clones producing MAbs were obtained. Twenty‐four MAbs were characterized by ELISA, according to their cross‐reactivity to each VLP (GI.1, GI.5, GI.6, GII.2, GII.3, GII.4, GII.7, GIV, and GV). The MAbs were classified by this method into: (i) MAbs broadly cross‐reactive to all GI, GII, GIV and GV strains; (ii) those reactive in a genogroup‐specific; and (iii) those reactive in a genotype‐specific manner. Further analysis of three broadly cross‐reactive MAbs with a competitive ELISA demonstrated that at least two different common epitopes are located on the capsid protein of human SaVs in the four genogroups. The MAbs generated and characterized in this study will be useful tools for further study of the antigenic and structural topography of the human SaV virion and for developing new diagnostic assays for human SaV.  相似文献   

2.
In this study we examined the genetic diversity and geographic scale of genotype distribution within the model legume species Medicago truncatula widely distributed in pasture and marginal agricultural lands in Greece and other Mediterranean countries. Thirty one Medicago truncatula and Medicago littorialis accessions were chosen on the basis of their geographical distributions and studied using 9 polymorphic simple sequence repeats (SSR) markers. The number of alleles per locus varied between 3 and 7. A total of 42 alleles were detected with a mean value of 4.66 alleles per locus. Geographic origin was not related with genotypic similarity among accessions. However, there were instances of close genetic relatedness between accessions from neighboring locations in a geographic compartment. In conclusion, the presented data revealed extensive M. truncatula genotype dispersal in Greece pointing to the significance of preserving local genetic resources in their natural environment.  相似文献   

3.
In this study we investigated the genotypic diversity and the migration patterns of Phytophthora infestans in the Nordic countries. Isolates of P. infestans from outbreaks in 43 fields sampled in 2008 were collected using stratified sampling with country, field, and disease foci as the different strata. Microsatellites were used as markers to determine the genotypic variation in the sampled material. The results show a high genotypic variation of P. infestans in the Nordic countries with most of the genotypes found only once among the collected isolates. The major part of the genotypic variation was observed within the fields, with low differentiation between the fields. The observed low association of alleles among loci is consistent with frequent sexual reproduction of P. infestans in the Nordic countries. Coalescence analyses did not support a single common population for the four countries, thus indicating some degree of geographic differentiation. The analyses of migration patterns showed differing levels of gene flow among the Nordic countries. No correlation between migration rates and geographical distance could be seen. This could be explained by different degrees of genetic similarity between the pathogen populations in the different countries.  相似文献   

4.
Environmental change is anticipated to negatively affect both plant and animal populations. As abiotic factors rapidly change habitat suitability, projections range from altered genetic diversity to wide-spread species loss. Here, we assess the degree to which changes in atmospheric composition associated with environmental change will influence not only the abundance, but also the genotypic/phenotypic diversity, of herbivore populations. Using free-air CO2 and O3 enrichment (FACE) technology, we assess numerical responses of pea aphids (Acyrthosiphon pisum) exhibiting a pink–green genetic polymorphism and an environmentally determined wing polyphenism on broad bean plants (Vicia faba) under enriched CO2 and/or O3 atmospheres, over multiple generations. We show that these two greenhouse gases alter not only aphid population sizes, but also genotypic and phenotypic frequencies. As the green genotype was positively influenced by elevated CO2 levels, but the pink genotype was not, genotypic frequencies (pink morph : green morph) ranged from 1 : 1 to 9 : 1. These two genotypes also displayed marked differences in phenotypic frequencies. The pink genotype exhibited higher levels of wing induction under all atmospheric treatments, however, this polyphenism was negatively influenced by elevated O3 levels. Resultantly, frequencies of winged phenotypes (pink morph : green morph) varied from 10 : 1 to 332 : 1. Thus, atmospheric conditions associated with environmental change may alter not just overall population sizes, but also genotypic and phenotypic frequencies of herbivore populations, thereby influencing community and ecosystem functioning.  相似文献   

5.
Cicindela (Calochroa) whithilli (Hope) and Cicindela (Calochroa) flavomaculata Hope (Cicindelidae: Coleoptera) are seasonally dominant predatory insects in the cultivated, and irrigated rice paddy fields of the South Indian peninsula. While studying the feeding ecology of these tiger beetles in rice paddy agro‐ecosystems in Sringeri area of the central Western Ghats, we examined their potential as biocontrols on the major rice paddy pest populations available in this region. Earthworms and tadpoles were significant prey organisms during the early cultivation period, while other traditional prey organisms like ants and spiders (mainly wolf and jumping spiders) were more common as prey organisms toward the mid‐season. The results showed that the feeding fauna of tiger beetles can extend to prey items beyond arthropods, to include vertebrates. Cicindela (Calochroa) duponti Dejean is another common species that occurs abundantly in the Areca orchards and on the bunds that separate rice paddy fields from adjacent uncultivated lands. We performed laboratory tests to determine the feeding guild of these beetles, and to investigate their possible role as a predator of the rice paddy pests. Although preliminary in nature, the results suggest that both C. whithilli and C. flavomaculata are ineffective as biocontrol agents of rice paddy agro‐ecosystems. They appear to have only a marginal impact on the larvae of Leptocorisa acuta, a major insect pest of paddy rice, but further experimental and observational studies are needed to firmly establish the significance of this observation.  相似文献   

6.
Recent taxonomic revisions in the genus Diaphanosoma have made the uncertainty in species discrimination with morphological characters obvious. Therefore species characterization on a genetic basis seems to be required.Here we examined the genetic structure of two Diaphanosoma mongolianum populations and three Diaphanosoma brachyurum populations in Central Europe by allozyme electrophoresis. A genetic differentiation between both species was evident. 5 out of 9 tested loci carried diagnostic alleles. Both species differed in their habitat choice: D. mongolianum was adapted to higher trophic levels than D. brachyurum. Co-occurrence was observed in a eutrophic lake. Populations sampled from their preferred habitats showed high genotype diversities.Most genotype frequency distributions were in agreement with Hardy-Weinberg expectations and temporal (between years) changes in genotypic compositions were not common. This indicated annually occurring bouts of sexual reproduction, similar to intermittent Daphnia populations. Genetic differentiation among lakes suggested restricted gene flow.  相似文献   

7.
Flowering occurrence and allozymic variation were studied in eight local populations of Lemna minor in eastern Ontario, Canada. After 2 years of survey, not a single flower was observed. This absence of flowering suggests the possibility of loss of sexual reproduction. This may have had no net adverse effect on fitness given the simple life history and prolific vegetative propagation in L. minor. However, the absence of sexual reproduction may limit genotypic diversity. The allozymic analysis detected 18 loci from 13 enzyme systems. Large deviations from Hardy-Weinberg equilibrium were common because of an excess of homozygotes for several enzyme systems. The genotypic diversity within these eight populations had a mean D value of 0.973 with an average number of genotypes per population of 19.6. These results suggest that genotypic diversity within these populations is not severely limited by the rarity of sexual reproduction. The mean genotypic distance index (D14 = 0.801) suggests a high degree of differentiation between populations. The mean number of populations per genotype was 1.78. Using a Mantel test, the genotypic distance matrix was not significantly related to the population-to-population distance matrix (t = -0.161, P = 0.413). Although rare events of sexual reproduction may help maintain genetic variation, somatic mutations and multiple origins of clones may be important factors maintaining genetic diversity both within and between populations of L. minor.  相似文献   

8.
We investigated the influence of human activities on the spawning migration of the mud loach, Misgurnus anguillicaudatus. Mud loaches migrate from rivers to paddy fields for spawning. In this study, the number of adult loaches in paddy fields showed a peak in late May and rapidly decreased in July. In early July, water is discharged from paddy fields in order to allow the fields to dry for a few weeks, and water is again supplied later. The spawning season of the loaches probably spans from mid May to August; this was concluded by observing physiological indicators such as the gonad somatic index, oocyte maturity and serum levels of testosterone, estradiol-17β and 17α, 20β-dihydroxy-4-pregnen-3-one. When the loaches mature, they migrated to paddy fields if they could swim upward through the drainage ditches. However, the drainage ditches of modern paddy fields were reconstructed to deepen the water levels. The artificial drought of the rice culture management led to a discharge of water and loaches from the paddy fields during their spawning season. These results indicate that modern rice cultivation causes obstruction of the migration route and loss of spawning grounds; consequently, loaches use limited space and period of the paddy field for their spawning.  相似文献   

9.
用盆栽试验研究了12个冬小麦品种(系)在成熟期以生物学产量为基础的利用效率(UtEB=生物学产量/吸氮量)、收获系数、氮素收获系数和籽粒氮浓度对以籽粒产量为基础的利用效率(UtEG=籽粒产量/吸氮量)的影响。相关分析证明,这4个因子对UtEG的影响各不相同。无论是低氮还是高氮处理,UtEG与UtEB和收获指数呈正相关,而与籽粒氮浓度呈负相关,与氮素收获指数的相关性较差。从相关系数的高低判断,在这名个因子中,籽粒氮浓度对UtEG的影响最大,其次是UtEB和收获指数。虽然氮素收获指数与UtEG的相关性较差,但它在高氮处理的水平较低,致使利用效率(UtEG)降低。此外还分析了开花期单株顶3叶叶绿素含量与利用效率(UtEG和UtEB)的关系。开花期单株顶3叶叶绿素含量与吸氮量的比值(UtEC)因品种(系)而异,且大多数品种(系)的UtEC受供氮水平的影响小,推测该性状可能受遗传控制。相关分析表明,在低氮处理中,UtEC分别与UtEG和UtEB呈显著或极显著正相关,说明UtEC可能是导致品种间利用效率差异的内在因素之一。在高氮处理中,由于叶绿素含量不是光合作用的限制因素,UtEC与UtEG、UtEB相关性较差,对其原因的深入研究,可为采取措施提高高肥条件下的利用效率提供理论依据。  相似文献   

10.
Based largely on analogy with latitudinal trends in species diversity, it has been proposed that levels of genotypic (clonal) diversity in parthenogenetic populations from high latitudes should be lower than those in populations from the temperate zone or the tropics. Prior studies have shown that low-arctic populations of obligately asexual Daphnia pulex are less clonally diverse than temperate-zone populations. To test for the existence of a latitudinal trend, an allozymic survey of obligately parthenogenetic populations of D. pulex was conducted at a site in the Canadian high-arctic. The study revealed the presence of 75 clones in 179 tundra ponds that were surveyed. On average, 4.5 clones coexisted in single ponds with a range of 1–14 clones. These diversity values are as great (or greater) than those observed in more southerly populations and conflict with the notion of reduced levels of genetic variation in arctic populations. Mechanisms that may influence genetic (clonal) diversity in apomictic complexes are discussed.  相似文献   

11.
Genetic variations in Astyanax sp. fish from Vila Velha State Park and Tibagi river (Paraná, Brazil) were analyzed by RAPD. Intrapopulational genetic similarity was analyzed at three collection sites. The higher RAPD polymorphism observed at site 3 (Tibagi river) suggests either an overlapping of structured populations or the presence of coexisting morphotypes at this site. Significant p values obtained by homogeneity tests revealed an unequal loci proportion among populations. The significance of similarity coefficients indicated that the differences observed among populations are relevant. These findings provide important information for the management and conservation of the species analyzed and for genetic variability maintenance programs.  相似文献   

12.
炉渣与生物炭施加对稻田土壤产甲烷菌群落结构的影响   总被引:3,自引:0,他引:3  
为了了解废弃物施加处理影响稻田甲烷排放通量的微生物学机制,对稻田分别进行炉渣、生物炭单一施加和混合施加处理,分析施加处理条件下早、晚稻拔节期稻田土壤的理化性质,并采用PCR-RFLP技术及克隆测序对稻田土壤中的产甲烷菌群落组成多样性及其结构进行分析。研究结果表明:早稻拔节期,混施处理显著提高土壤盐度和pH;晚稻拔节期,混施处理显著提高土壤盐度,炉渣和混施处理显著提高pH。香农-威纳指数(H')和辛普森指数(D)显示:炉渣、生物炭和混施处理提高了稻田土壤产甲烷菌的多样性。群落组成分析结果表明:稻田土壤产甲烷菌主要含有甲烷微菌目(Methanomicrobiales)、甲烷杆菌目(Methanobacteriales)、甲烷八叠球菌目(Methanosarcinales)、甲烷球菌目(Methanococcales)、甲烷胞菌目(Methanocellales)和Methanomassiliicoccales等6大类群,其中甲烷微菌目(Methanomicrobiales)为优势类群。从属水平的群落结构来看,与对照相比,3种施加处理均降低了早稻土壤Methanomassiliicoccus相对丰度;生物炭处理还降低了Methanosarcina相对丰度。初步认为Methanomassiliicoccus和Methanosarcina这2个菌属与CH_4排放量减少密切相关。  相似文献   

13.
The exposure of paddy fields to arsenic (As) through groundwater irrigation is a serious concern that may not only lead to As accumulation to unacceptable levels but also interfere with mineral nutrients in rice grains. In the present field study, profiling of the mineral nutrients (iron (Fe), phosphorous, zinc, and selenium (Se)) was done in various rice genotypes with respect to As accumulation. A significant genotypic variation was observed in elemental retention on root Fe plaque and their accumulation in various plant parts including grains, specific As uptake (29–167 mg kg?1 dw), as well as As transfer factor (4–45%). Grains retained the least level of As (0.7–3%) with inorganic As species being the dominant forms, while organic As species, viz., dimethylarsinic acid and monomethylarsonic acid, were non-detectable. In all tested varieties, the level of Se was low (0.05–0.12 mg kg?1 dw), whereas that of As was high (0.4–1.68 mg kg?1 dw), considering their safe/recommended daily intake limits, which may not warrant their human consumption. Hence, their utilization may increase the risk of arsenicosis, when grown in As-contaminated areas.  相似文献   

14.
This study investigated the feasibility of using an invasive snail, Pomacea canaliculata, as a food source and water purifier for the commercial breeding of the loach Misgurnus anguillicaudatus. The predatory potential of M. anguillicaudatus (3.5–5.5?g) against hatchling snails was evaluated in aquaria and simulated paddy fields. Some hatchling snails left the water to avoid being preyed upon by the loaches, and approximately 10 hatchlings died per day in the presence of five loaches in aquaria, whereas a weaker snail control effect was observed in the simulated paddy fields. The growth of rice seedlings (Oryza sativa) was not reduced by the presence of hatchling snails alone, but the shoot biomass of seedlings coexisting with snails was promoted after introducing the loaches. Additionally, the presence of P. canaliculata adults improved the aquatic environment in the short term for loach breeding by decreasing the turbidity of the water. Importantly, M. anguillicaudatus (12–18?g) mortality decreased and its weight increased in the presence of adult snails.  相似文献   

15.
Cercospora leaf spot caused by Cercospora beticola is a significant threat to the production of sugar and table beet worldwide. A de novo genome assembly of C. beticola was used to develop eight polymorphic and reproducible microsatellite markers for population genetic analyses. These markers were used, along with five previously described microsatellite loci to genotype two C. beticola populations from table beet fields in New York, USA. High allelic and genotypic diversity and low population differentiation were found between fields. Linkage disequilibrium of loci after clone-correction of datasets was attributed to the presence of two distinct clonal lineages within the populations. Linkage equilibrium of loci in one of the clusters supported the presence of sexual reproduction. The draft de novo genome assembly will help elucidate the reproductive system of C. beticola through investigating evidence of recombination in the C. beticola genome.  相似文献   

16.
Corticosteroids are used to reduce the oedema and prevent scar tissue formation of the upper airways by their ability to inhibit influx of inflammatory cells, limit capillary permeability and block collagen synthesis in the early stages of wound healing. Triazolopyrimidine (Trapidil) is an antiplatelet agent that acts in part as a phosphodiesterase inhibitor and as a competitive inhibitor of the platelet-derived growth factor (PDGF) receptor. Trapidil, with its vasodilator and NO releasing effect may have some potential to diminish the tissue injury. This study was carried out to evaluate the effects of trapidil (triazolopyrimidine) on lipid peroxidation and nitric oxide in the corticosteroid-impaired healing of tracheal anastomoses. Thirty-four adult Wistar rats were divided into five groups. The animals underwent tracheal transection and primary anastomoses. The groups were assigned as follows: group I, control, (GI, n = 6); group II, sham, (GII, n = 6); group III, dexamethasone, 0.1 mg kg(-1) twice daily intramuscularly, (GIII, n = 8); group IV, trapidil, 6 mg kg(-1) twice daily intraperitoneally (GIV, n = 7); group V, dexamethasone, 0.1 mg kg(-1) plus trapidil, 6 mg kg(-1) twice daily (GV, n = 7), for 1 week. After 1 week, anastomotic healing was assessed by measurement of bursting pressure, evaluation of histopathology, measurement of MDA and nitrite/nitrate levels. In GIII, GIV and GV bursting pressures resulted in significantly reduced anastomotic strength compared to the controls (p < 0.001 for all groups). The difference between bursting pressures of GIII and GIV was not found to be statistically significant (p = 0.966). In regard to fibroblast proliferation and collagen content, a significant difference was found between GIII and GI (p < 0.01), A significant difference was also found when GIV and GV were compared to GIII (p < 0.01). MDA and nitrite/nitrate levels were found to be higher in GIII when compared to all other groups. MDA levels of GIV and GV rats were found to be lower than GIII (p < 0.001, for both groups). The nitrite/nitrate levels of GIV and GV rats were found to be lower than GIII (p < 0.05), and higher than GI (p < 0.001). Trapidil may be useful for its preventive effects on lipid peroxidation and possible increases in NO in cases with corticosteroid-impaired healing of trachea anastomoses.  相似文献   

17.
Summary A lake population of Daphnia, and several subpopulations in large plastic enclosures within the lake and manipulated with respect to population densities and nutrient enrichment (acetate, nitrate, phosphate), exhibited differences among genotypic frequencies at the phosphoglucoisomerase locus. The lake and control populations exhibited similar genotypic frequencies which were significantly different from those found in the three manipulated populations. The similarity of the genetic reaction in the manipulated populations may be related to similarity of manipulation. All populations exhibited deviations from Hardy-Weinberg proportions in the form of heterozygote excess.  相似文献   

18.
Plant clonality may greatly reduce effective population size and influence management strategies of rare and endangered species. We examined genetic diversity and the extent of clonality in four populations of the monotypic herbaceous perennial Japonolirion osense, which is one of the most rare flowering plants in Japan. Allozyme analysis revealed moderate levels of genetic variation, and the proportion of polymorphic loci (P=66.7%) was higher than the value for species with similar life-history traits. With four polymorphic loci, 19 multilocus genotypes were observed among 433 aerial shoot samples and 10 (52%) were found only in single populations. The proportion of distinguishable genotypes (PD=0.10) and Simpson's index of diversity (D=0.52) also exhibited moderate levels of genotypic diversity compared to other clonal plants, with genotype frequencies at Hardy-Weinberg equilibrium. The distributions of genotypes were often localized and they were mostly found within a radius of 5 m. Spatial autocorrelation analysis showed that shoot samples located 4 m apart were expected to be genetically independent. The results suggest that the spatial extent of genets was relatively narrow and thus the clonality was not extensive.  相似文献   

19.
Although high protein and low glycemic index (GI) foods are thought to promote satiety, little is known about the effects of GI, protein, and their interaction on hunger and energy intake several hours following a mixed meal. This study investigated the long term effects of GI, protein, and their combined effects on glucose, insulin, hunger, and energy intake in healthy, sedentary, overweight, and obese adults (BMI of 30.9 ± 3.7 kg/m2). Sixteen individuals participated separately in four testing sessions after an overnight fast. The majority (75%) were non‐Hispanic Blacks. Each consumed one of four breakfast meals (high GI/low protein, high GI/high protein, low GI/low protein, low GI/high protein) in random order. Visual analog scales (VAS) and blood samples were taken at baseline, 15 min, and at 30 min intervals over 4 h following the meal. After 4 h, participants were given the opportunity to consume food ad libitum from a buffet style lunch. Meals containing low GI foods produced a smaller glucose (P < 0.002) and insulin (P = 0.0001) response than meals containing high GI foods. No main effects for protein or interactions between GI and protein were observed in glucose or insulin responses, respectively. The four meals had no differential effect on observed energy intake or self‐reported hunger, satiety, and prospective energy intake. Low GI meals produced the smallest postprandial increases in glucose and insulin. There were no effects for GI, protein, or their interaction on appetite or energy intake 4 h after breakfast.  相似文献   

20.
Numerous studies of population structure in sessile clonal marine invertebrates have demonstrated low genotypic diversity and nonequilibrium genotype frequencies within local populations that are monopolized by relatively few, highly replicated genets. All of the species studied to date produce planktonic sexual propagules capable of dispersing long distances; despite local genotypic disequilibria, populations are often panmictic over large geographic areas. The population structure paradigm these species represent may not be typical of the majority of clonal invertebrate groups, however, which are believed to produce highly philopatric sexual propagules. I used allozyme variation to examine the population structure of the temperate soft coral, Alcyonium rudyi, a typical clonal species whose sexually produced larvae and asexually produced ramets both have very low dispersal capabilities. Like other clonal plants and invertebrates, the local population dynamics of A. rudyi are dominated by asexual reproduction, and recruitment of new sexually produced genets occurs infrequently. As expected from its philopatric larval stage, estimates of genetic differentiation among populations of A. rudyi were highly significant at all spatial scales examined (mean θ = 0.300 among 20 populations spanning a 1100-km range), suggesting that genetic exchange seldom occurs among populations separated by as little as a few hundred meters. Mapping of multilocus allozyme genotypes within a dense aggregation of A. rudyi ramets confirmed that dispersal of asexual propagules is also very limited: members of the same genet usually remain within < 50 cm of one another on the same rock surface. Unlike most previously studied clonal invertebrates, populations of A. rudyi do not appear to be dominated by a few widespread genets: estimates of genotypic diversity (Go) within 20 geographically distinct populations did not differ from expectations for outcrossing, sexual populations. Despite theoretical suggestions that philopatric dispersal combined with typically small effective population sizes should promote inbreeding in clonal species, inbreeding does not appear to contribute significantly to the population structure of A. rudyi. Genet genotype frequencies conformed to Hardy-Weinberg expectations in all populations, and inbreeding coefficients (f) were close to zero. In general, the population structure of A. rudyi did not differ significantly from that observed among outcrossing sexual species with philopatric larval dispersal. Age estimates suggest, however, that genets of A. rudyi live for many decades. Genet longevity may promote high genotypic diversity within A. rudyi populations and may be the most important evolutionary consequence of clonal reproduction in this species and the many others that share its dispersal characteristics.  相似文献   

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