Effects of elevated atmospheric CO2 on soil microbiota in calcareous grassland

Microbial responses to three years of CO₂ enrichment (600 μL L^–1) in the field were investigated in calcareous grassland. Microbial biomass carbon (C) and soil organic C and nitrogen (N) were not significantly influenced by elevated CO₂. Microbial C:N ratios significantly decreased under elevated CO₂ (– 15%, P = 0.01) and microbial N increased by + 18% (P = 0.04). Soil basal respiration was significantly increased on one out of 7 sampling dates (+ 14%, P = 0.03; December of the third year of treatment), whereas the metabolic quotient for CO₂ (qCO₂ = basal respiration/microbial C) did not exhibit any significant differences between CO₂ treatments. Also no responses of microbial activity and biomass were found in a complementary greenhouse study where intact grassland turfs taken from the field site were factorially treated with elevated CO₂ and phosphorus (P) fertilizer (1 g P m^–2 y^–1). Previously reported C balance calculations showed that in the ecosystem investigated growing season soil C inputs were strongly enhanced under elevated CO₂. It is hypothesized that the absence of microbial responses to these enhanced soil C fluxes originated from mineral nutrient limitations of microbial processes. Laboratory incubations showed that short-term microbial growth (one week) was strongly limited by N availability, whereas P was not limiting in this soil. The absence of large effects of elevated CO₂ on microbial activity or biomass in such nutrient-poor natural ecosystems is in marked contrast to previously published large and short-term microbial responses to CO₂ enrichment which were found in fertilized or disturbed systems. It is speculated that the absence of such responses in undisturbed natural ecosystems in which mineral nutrient cycles have equilibrated over longer periods of time is caused by mineral nutrient limitations which are ineffective in disturbed or fertilized systems and that therefore microbial responses to elevated CO₂ must be studied in natural, undisturbed systems.     

Restoration of Highly Impacted Subalpine Campsites in the Eagle Cap Wilderness, Oregon

The effects of intensive recreation impacts and restoration amendments on soil parameters were assessed at four campsites in the Eagle Cap Wilderness, northeastern Oregon. Sites (2,215‐ to 2,300‐m elevation) are characterized by shallow granitic soils, an Abies lasiocarpa/Pinus albicaulis overstory, and a Vaccinium scoparium understory. In fall 1995, plots were established at four campsites on three subalpine lakes in which soils were scarified, compost amended, and planted to native species. In summer 1998, we sampled surface soils (0–15 cm) on undisturbed sites (between and under vegetation) and unamended and compost‐amended campsite soils. Samples were analyzed for total organic C, total N, potentially mineralizable N (PMN), NH₄, soil moisture, microbial biomass, basal 5‐day respiration rates, and microbial community carbon utilization profiles. Unamended campsite soils had significantly lower levels of PMN, microbial biomass, basal respiration, and number of substrates metabolized in carbon utilization profiles. Compost addition elevated all these impacted parameters on campsite soils, although the increase in basal respiration rate was neither statistically significant nor sufficient to approach rates found underneath vegetation on undisturbed soils. Only the number of substrates metabolized in the carbon utilization profiles was significantly higher on compost‐amended soils than on undisturbed soils. Levels of PMN indicate that campsite soils may lack sufficient N for rapid plant regeneration, whereas amended and undisturbed soils contained adequate quantities of available N. This work suggests that compost amendments can ameliorate impacts to soil chemistry and microbial populations caused by camping, without exceeding the N fertility found on undisturbed soils.     

Patterns of restoration of soil physciochemical properties and microbial biomass in different landslide sites in the sal forest ecosystem of Nepal Himalaya

The pattern of natural restoration in soil components and processes was documented in five landslide-damaged (1–58-year-old) sites in the moist tropical sal (Shorea robusta) forest ecosystem of Nepal Himalaya. Comparisons were made with an undisturbed forest site in the same region. Concentrations of soil organic C, total N, total P and extractable nutrients (Ca, Mg and K) increased with the age of sites. The 58-year-old site showed concentrations of soil organic C, total N and total P that were 75–89% of concentrations in the undisturbed sal forest. The soil microbial biomass, the active fraction of soil organic matter, showed similar seasonal variations at all sites. The amount of mean microbial biomass (expressed as C, N and P contents) increased 4–5 times at the 58-year-old site relative to the 1-year-old site, and the bulk increase occurred within the initial 15 year. The increase in the C/N ratio of soil microbial biomass with age (9.4–11.6 years) reflected change in its composition. Although the net N-mineralization rate increased consistently until 58 years of age, the proportion of nitrification rate relative to ammonification rate distinctly decreased beyond 40 years. On the other hand, the soil available-N (both NO₃⁻ and NH₄⁺) concentrations increased from 1 to 40 year and then declined; with age the proportion of NH₄⁺ increased, however. Rates of restoration in soil properties were faster in the early successional stages (1–15 year) than late stages. Among different soil properties the restoration of soil microbial biomass (C and N) was faster than soil organic C and total N. Best fit power function models showed that the estimated times for the 58-year-old site to reach the level of the undisturbed, mature sal forest would be about 30–35 year for microbial biomass (C and N) and about 100–150 year for organic C and total N. Higher accumulation of soil microbial biomass and high N-mineralization rate at late successional stages indicated the re-establishment of enriched soil and restitution of nutrient cycling during the course of ecosystem restoration.     

How Physical Disturbance and Nitrogen Addition Affect the Soil Carbon Decomposition?

The decomposition of soil organic carbon (SOC) plays a critical role in regulating atmospheric CO₂ concentrations and climate dynamics. However, the mechanisms and factors controlling SOC decomposition are still not fully understood. Here, we conducted a 60 days incubation experiment to test the effects of physical disturbance and nitrogen (N) addition on SOC decomposition. N addition increased the concentration of NO₃^- by 51% in the soil, but had little effect on the concentration of NH₄⁺. N addition inhibited SOC decomposition, but such an effect differed between disturbed and undisturbed soils. In disturbed and undisturbed soils, application of N decreased SOC decomposition by 37% and 15%, respectively. One possible explanation is that extra N input suppressed microbial N mining and/or increased the stability of soil organic matter by promoting the formation of soil aggregates and incorporating part of the inorganic N into organic matter, and consequently decreased microbial mineralization of soil organic matter. Physical disturbance intensified the inhibition of N on SOC decomposition, likely because physical disturbance allowed the added N to be better exposed to soil microbes and consequently increased the availability of added N. We conclude that physical disturbance and N play important roles in modulating the stability of SOC.     

Responses of soil microorganisms to resource availability in urban, desert soils

Terrestrial desert ecosystems are strongly structured by the distribution of plants, which concentrate resources and create islands of fertility relative to interplant spaces. Atmospheric nitrogen (N) deposition resulting from urbanization has the potential to change those spatial patterns via resource inputs, resulting in more homogeneous soil resource availability. We sampled soils at 12 desert remnant sites around Phoenix, Arizona along a model-predicted gradient in N deposition to determine the degree to which deposition has altered spatial patterns in soil resource availability and microbial activity. Soil microbial biomass and abundance were not influenced by atmospheric N deposition. Instead, plant islands remained strong organizers of soil microbial processes. These islands of fertility exhibited elevated pools of resources, microbial abundance, and activity relative to interspaces. In both plant islands and interspaces, soil moisture and soil N concentrations predicted microbial biomass and abundance. Following experimental wetting, carbon dioxide (CO₂) flux from soil of interspaces was positively correlated with N deposition, whereas in plant islands, soil CO₂ flux was positively correlated with soil moisture content and soil organic matter. Soil CO₂ flux in both patch types showed rapid and short-lived responses to precipitation, demonstrating the brief time scales during which soil biota may process deposited materials. Although we observed patterns consistent with N limitation of microbes in interspaces, we conclude that atmospheric N deposition likely accumulates in soils because microbes are primarily limited by water and secondarily by carbon or nitrogen. Soil microbial uptake of atmospherically deposited N likely occurs only during sparse and infrequent rainfall.     

Elevated CO2 increases microbial carbon substrate use and nitrogen cycling in Mojave Desert soils

Identifying soil microbial responses to anthropogenically driven environmental changes is critically important as concerns intensify over the potential degradation of ecosystem function. We assessed the effects of elevated atmospheric CO₂ on microbial carbon (C) and nitrogen (N) cycling in Mojave Desert soils using extracellular enzyme activities (EEAs), community‐level physiological profiles (CLPPs), and gross N transformation rates. Soils were collected from unvegetated interspaces between plants and under the dominant shrub (Larrea tridentata) during the 2004–2005 growing season, an above‐average rainfall year. Because most measured variables responded strongly to soil water availability, all significant effects of soil water content were used as covariates to remove potential confounding effects of water availability on microbial responses to experimental treatment effects of cover type, CO₂, and sampling date. Microbial C and N activities were lower in interspace soils compared with soils under Larrea, and responses to date and CO₂ treatments were cover specific. Over the growing season, EEAs involved in cellulose (cellobiohydrolase) and orthophosphate (alkaline phosphatase) degradation decreased under ambient CO₂, but increased under elevated CO₂. Microbial C use and substrate use diversity in CLPPs decreased over time, and elevated CO₂ positively affected both. Elevated CO₂ also altered microbial C use patterns, suggesting changes in the quantity and/or quality of soil C inputs. In contrast, microbial biomass N was higher in interspace soils than soils under Larrea, and was lower in soils exposed to elevated CO₂. Gross rates of NH₄⁺ transformations increased over the growing season, and late‐season NH₄⁺ fluxes were negatively affected by elevated CO₂. Gross NO₃⁻ fluxes decreased over time, with early season interspace soils positively affected by elevated CO₂. General increases in microbial activities under elevated CO₂ are likely attributable to greater microbial biomass in interspace soils, and to increased microbial turnover rates and/or metabolic levels rather than pool size in soils under Larrea. Because soil water content and plant cover type dominates microbial C and N responses to CO₂, the ability of desert landscapes to mitigate or intensify the impacts of global change will ultimately depend on how changes in precipitation and increasing atmospheric CO₂ shift the spatial distribution of Mojave Desert plant communities.     

森林土壤融化期异养呼吸和微生物碳变化特征

采用室内土柱培养的方法,研究在不同湿度(55%和80%WFPS,土壤充水孔隙度)和不同氮素供给(NH_4Cl和KNO_3,4.5 g N/m~2)条件下,外源碳添加(葡萄糖,6.4 g C/m~2)对温带成熟阔叶红松混交林和次生白桦林土壤融化过程微生物呼吸和微生物碳的激发效应。结果表明:在整个融化培养期间,次生白桦林土壤对照CO_2累积排放量显著高于阔叶红松混交林土壤。随着土壤湿度的增加,次生白桦林土壤对照CO_2累积排放量和微生物代谢熵(q_(CO_2))显著降低,而阔叶红松混交林土壤两者显著地增加(P0.05)。两种林分土壤由葡萄糖(Glu)引起的CO_2累积排放量(9.61—13.49 g C/m~2)显著大于实验施加的葡萄糖含碳量(6.4g C/m~2),同时由Glu引起的土壤微生物碳增量为3.65—27.18 g C/m~2,而施加Glu对土壤DOC含量影响较小。因此,这种由施加Glu引起的额外碳释放可能来源于土壤固有有机碳分解。融化培养结束时,阔叶红松混交林土壤未施氮处理由Glu引起的CO_2累积排放量在两种湿度条件下均显著大于次生白桦林土壤(P0.001);随着湿度的增加,两种林分土壤Glu引起的CO_2累积排放量显著增大(P0.001)。单施KNO_3显著地增加两种湿度的次生白桦林土壤Glu引起的CO_2累积排放量(P0.01)。单施KNO_3显著地增加了两种湿度次生白桦林土壤Glu引起的微生物碳(P0.001),单施NH_4Cl显著地增加低湿度阔叶红松混交林土壤Glu引起的微生物碳(P0.001)。结合前期报道的未冻结实验结果,发现冻结过程显著地影响外源Glu对温带森林土壤微生物呼吸和微生物碳的刺激效应(P0.05),并且无论冻结与否,温带森林土壤微生物呼吸和微生物碳对外源Glu的响应均与植被类型、土壤湿度、外源氮供给及其形态存在显著的相关性。     

Rates of net nitrogen mineralization in disturbed and undisturbed soils

Quantification of net nitrogen mineralization (NNM) in soils is indispensable in order to optimize N fertilization of crops. Two long-term laboratory incubation methods were applied to determine rates of net nitrogen mineralization (r_NNM) of soils from two sites of arable land (sandy loam soil, silty loam soil) at four temperature levels (2°C, 8°C, 14°C, 21°C). Since variability within replicates was small, the modified 12-week incubation method of Stanford and Smith (1972) using disturbed soils allowed to establish reliable Arrhenius functions with reasonable expenditure. The fit of the functions derived from the 5-month incubation of 23 undisturbed soil columns (4420 cm³) was worse. This was caused by greater variability and less differentiation between temperature levels. Results of both experiments could be described best by zero-order kinetics. Mean mineralization rates of disturbed samples were approximately twice as high than those of undisturbed samples. The suitability of both methods for the prediction of NNM at site conditions is discussed. Actual respiration (AR) at incubation temperatures and substrate induced respiration (SIR) were measured at the end of the incubation of undisturbed soil columns. The results presented reveal that soil microbial communities develop in a different manner during long-term incubation at different temperatures. This behavior offends the underlying assumption that soil microbes remain in steady-state during incubation and that rising rates are physiological reactions to temperature enhancement. Therefore soil microbial biomass (SMB) dynamics during the experiment has to be accounted for when rates of NNM and Arrhenius functions are established. R Merck Section editor     

Physical disturbance of an upland grassland influences the impact of elevated UV-B radiation on metabolic profiles of below-ground micro-organisms

This investigation determined the response of soil microbial communities to enhanced UV‐B radiation and disturbance in upland grassland. A factorial field experiment encompassing two levels of UV‐B supplementation (simulating ambient and a 30% increase in stratospheric ozone) and two levels of disturbance (disturbed and undisturbed) was established at Buxton Climate Change Impacts Laboratory, Derbyshire, UK, and maintained for 7 years prior to sampling. Enhanced UV‐B increased microbial utilization of carbohydrates, carboxylic acids, polymers and aromatic compounds present in Biolog® GN plates when inoculated with soils taken from disturbed plots, but did not affect carbon utilization of soil microbial communities associated with undisturbed plots (UV‐B×Disturbance interaction, P<0.05 for each substrate type). UV‐B treatment did not affect numbers of bacteria or fungi. Direct microscopic counts showed fewer bacteria in soil originating from disturbed plots than from undisturbed plots (Disturbance, P<0.001), although a greater number of culturable bacteria and fungi were isolated from disturbed than from undisturbed soils (Disturbance, P<0.001). No UV‐B‐ or disturbance‐related differences in protein, starch or urea hydrolysis were exhibited by bacterial isolates. UV‐B treatment did not affect total plant biomass within undisturbed plots or the biomass of individual groupings of grasses, forbs and mosses. Per cent root length colonized by arbuscular mycorrhizal fungi (AMF) was not affected by enhanced UV‐B radiation in the undisturbed plots. Neither AMF nor plant biomass was measured in disturbed plots. The key findings of this study show that UV‐B‐mediated alterations in carbon utilization occurred in soil microbial communities subjected to disturbance, but such changes were not observed in communities sampled from undisturbed grassland. Differences in the catabolic potential of microbial communities from disturbed grassland subjected to enhanced UV‐B are probably related to plant‐mediated changes in resource availability or quality.     

Influence of military land uses on soil carbon dynamics in forest ecosystems of Georgia,USA

Soil organic carbon (C) dynamics have been used to assess sustainable land managements in forest ecosystems. Impact, defined as intensive forms of land use that affect the soil function, can change C quantity and quality in soils, leading to a progressive degradation of the ecosystems. Soil CO₂ effluxes were studied in five transects located at the Fort Benning military reservation in west-central Georgia, USA. Transects were located in upland and bottomland sites with low, moderate, and high level of disturbance due to military training. Water-extractable C, microbial biomass C, and total C and N were measured at each point along the transects. Soil CO₂ effluxes were strongly related to the level of disturbance. Low-impact sites exhibited higher CO₂ efflux compared to high-impact areas. Similarly, total C, total N, microbial biomass C and labile C were also affected by the intensity of military training. Soil C parameters were significantly and positively correlated to CO₂ efflux. Results indicated that parameters related to soil C dynamics such as CO₂ efflux can be potentially used as indicators of the impacts of military training in forest ecosystems.