植物根际微生物群落构建的研究进展

植物根际是指植物根系与土壤的交界面,是根系自身生命活动和代谢对土壤影响最直接、最强烈的区域,其物理、化学和生物性质不同于土体土壤。在这个区域里,与植物发生相互作用的大量微生物,被称为根际微生物。根际微生物在植物的生长发育和植物病虫害的生物防治等方面都具有十分重要的意义。本文总结了根际微生物群落构建的研究现状,介绍了根际微生物的经典和最新的研究方法,包括根箱法、同位素技术以及高通量测序、菌群定量分析、高通量分离培养等方法在根际微生物研究中的应用,讨论了植物根系分泌物(碳水化物、氨基酸、黄酮类、酚类、激素及其信号物质)和土壤物理化学性质对根际微生物群落的影响,概述了根际微生物-植物的互作机制,以及根际微生物群落对植物的促生作用、提高植物抗逆性和抑制作用,并对根际微生物群落研究中存在的问题和未来发展方向进行了展望。     

根系活动对湿地植物根际铁异化还原的影响及机制研究进展

根系活动是影响湿地植物根际铁异化还原速率的关键因素之一。以往国内外湿地铁异化还原的研究多为分析和比较各类中宏观生境中铁异化还原能力的差异。近年来,湿地植物根际微域铁的生物地球化学行为也日益成为该领域的研究热点。综述了根际铁异化还原研究概况,梳理了根系活动对根际铁异化还原关键因子的作用机制,分析了根际铁异化还原和其他有机质代谢途径的竞争关系,探讨了根际铁异化还原对根系活动动态变化和异质性的响应,提出了根际铁异化还原的概念模型,并指出了未来我国湿地植物根际铁异化还原研究应加强的工作。     

植物根系分泌物主要生态功能研究进展

根系分泌物在植物根系-土壤-微生物互作过程及其生态反馈机制中发挥重要作用。在植物根际复杂网络互作过程中, 根系分泌物被认为是“根际对话”的媒介, 其在调控植物适应微生境、缓解根际养分竞争及构建根际微生物群落结构方面意义重大。该文结合国内外该领域主要研究成果, 综述了根系分泌物对植物生长、土壤微生物特性及土壤养分循环的影响, 并展望了未来根系分泌物的研究方向。     

植物修复石油烃污染土壤的机制

根据石油烃污染土壤植物修复的应用和研究现状,对近年来国内外植物修复机制进行阐述与探讨。植物首先通过根系直接吸收石油烃,并利用自身的新陈代谢或植物内生菌的协作将其去除。石油烃一旦被根系吸收,植物就会通过木质化作用将其储存在组织中,或通过植物挥发或植物降解将其转化成一些低毒的中间代谢产物或CO_2和H2O;而植物内生菌与植物降解、植物修复以及植物保护密切相关。其次,根际分泌物和根际微生物在石油烃污染土壤根际修复方面起到重要作用。根际是受根系活动影响的一个微生态区,因而可以认为根际修复是去除土壤中石油烃的主要方式。植物根系可以向根际释放一些分泌物和酶类。其中,酶可以直接作用于石油烃,对石油烃的降解起到关键的作用;而根际分泌物可以向根际微生物提供碳源、能源或共代谢物,使根际微生物数量和活性明显高于非根际,生物降解作用增强。今后可以从根际分泌物作用的微生态过程、功能基因的寻找和构建、厌氧氧化的过程和机制、植物内生菌的作用和应用,以及利用组学手段研究植物修复机制5个方面开展工作,以期望为未来植物修复工作提供重要的科学支持。     

连香树人工林根系分泌物输入季节性变化及其驱动的根际微生物特性研究

根系分泌物介导的根际过程具有重要的生态学效应,但目前有关植物尤其是濒危珍稀植物根系分泌物及其介导的土壤生物地球化学循环过程的原位季节动态研究甚少。本文以阿坝州茂县大沟流域30年生的国家二级濒危保护植物连香树人工林为研究对象,于2014年4、7、9和12月利用原位收集装置对连香树根系分泌物进行原位收集;并同步分析了根际土壤微生物特性的变化。结果表明：（1）根系分泌物C和N分泌速率均呈现明显的季节动态变化,其中,夏季最高,冬季最低。（2）根际土壤微生物碳、氮及土壤酶活性显著高于非根际,表现出正的根际效应;根际效应也与根系分泌物输入表现出类似的季节动态规律,即夏季（7月）最高,而冬季（12月）最低。（3）进一步相关分析表明：根系分泌物分泌速率与土壤微生物碳、氮及土壤酶活性根际效应值呈线性正相关,表明根系分泌物输入是驱动根际微生物活性的重要因子,揭示连香树根系碳输入对根际土壤过程和功能的季节响应。未来研究应加强根系分泌物输入与土壤生物地球化学循环过程的偶联效应与机制研究。     

根系分泌物介导的根际效应及在水体生态修复中的应用潜力

文章主要以根系分泌物为核心, 综述了根系分泌物的分类、发生机理及影响因素; 围绕着植物-土壤-微生物三者的关系, 阐述了根系分泌物介导的植物与植物之间的化感作用、植物与根际微生物之间的协同作用以及植物微生物相互作用对土壤物质循环的影响。水生植物以其生境的特殊性和功能的不可替代性, 对沉积物污染物去除和水体生态修复产生显著的影响。在水体生态问题较为严峻的今天, 充分认识水生植物根系分泌物介导的根际过程将为水生植物生态学和水体生态修复领域的发展提供基础, 并为学科应用潜力的开发提供依据。     

根际微生物调控植物根系构型研究进展

根系构型是最重要的植物形态特征之一,具有可塑性,既由遗传因素控制,又受到许多环境因子的调控。近年的大量研究表明,根际微生物能够调控植物的根系构型,进而影响植物的一系列生理与生态过程。综述丛枝菌根真菌(AMF)、根瘤菌、植物根际促生菌(PGPR)等重要根际微生物类群对植物根系构型的调控模式以及相应的调控机理,并对进一步的研究进行了展望,旨在为今后的相关研究和实际应用提供参考。     

连作障碍与根际微生态研究Ⅰ.根系分泌物及其生态效应

作物、蔬菜、果树以及苗木长期连作后,皆出现生长衰退和产量降低．许多研究结果表明,连作条件下土壤生态环境对植物生长有很大的影响,尤以植物残体与病原微生物的分解产物,对植物有致毒作用,并影响植物根系分泌物正常代谢,以致于发生自毒作用．本文围绕根系分泌物与根际微生态的相互关系,系统地介绍连作障碍条件下,影响根系分泌物的环境因素（土壤空气、湿度、养分与微生物）、活性物质（自身毒素、残体分解物、微生物产生毒素）、土壤病原菌等的根际效应,为深入研究根系分泌物与连作障碍的相互作用机制提供启示．     

连作障碍与根际微生态研究 Ⅰ. 根系分泌物及其生态效应

作物、蔬菜、果树以及苗木长期连作后,皆出现生长衰退和产量降低。许多研究结果表明,连作条件下土壤生态环境对植物生长有很大的影响,尤以植物残体与病原微生物的分解产物,对植物有致毒作用,并影响植物根系分泌物正常代谢,以致于发生自毒作用。本文围绕根系分泌物与根际微生态的相互关系,系统地介绍连作障碍条件下,影响根系分泌物的环境因素(土壤空气、湿度、养分与微生物)、活性物质(自身毒素、残体分解物、微生物产生毒素)、土壤病原菌等的根际效应,为深入研究根系分泌物与连作障碍的相互作用机制提供启示。     

基于菌植互作的植物根际细菌钝化镉作用和机制研究进展

土壤重金属镉(Cd)污染严重危害农产品安全生产,植物根际细菌在钝化土壤Cd和帮助作物抵御Cd胁迫方面发挥重要作用。本文首先概括在修复Cd污染土壤中得到广泛应用的植物根际细菌种类,并从根际细菌直接吸附Cd、调整土壤理化特性、调控土壤微生物群落和其他作用4方面阐述了植物根际细菌对Cd的钝化作用,其次从菌植互作角度阐述植物根系分泌物与根际细菌群落相互影响对土壤Cd的钝化作用。最后展望重金属胁迫下植物根际钝化Cd核心菌群的构建,以在新兴学科与技术的快速发展中探明植物根系-微生物互作体系的分子机制,深入开展植物根际细菌钝化修复重金属污染土壤的理论研究和实践。     

Root porosity, radial oxygen loss and iron plaque on roots of wetland plants in relation to zinc tolerance and accumulation

Background and aims

Wetland plants have been widely used in constructed wetlands for the clean-up of metal-contaminated waters. This study investigated the relationship between rate of radial oxygen loss (ROL), root porosity, Zn uptake and tolerance, Fe plaque formation in wetland plants.

Methods

A hydroponic experiment and a pot trial with Zn-contaminated soil were conducted to apply different Zn level treatments to various emergent wetland plants.

Results

Significant differences were found between plants in their root porosities, rates of ROL, Zn uptake and Zn tolerance indices in the hydroponic experiment, and concentrations of Fe and Mn on roots and in the rhizosphere in the pot trial. There were significant positive correlations between root porosities, ROL rates, Zn tolerance, Zn, Fe and Mn concentrations on roots and in the rhizosphere. Wetland plants with higher root porosities and ROL tended to have more Fe plaque, higher Zn concentrations on roots and in their rhizospheres, and were more tolerant of Zn toxicity.

Conclusions

Our results suggest that ROL and root porosity play very important roles in Fe plaque formation, Zn uptake and tolerance, and are useful criteria for selecting wetland plants for the phytoremediation of Zn-contaminated waters and soils/sediments.     

Iron plaques improve the oxygen supply to root meristems of the freshwater plant, Lobelia dortmanna

* High radial oxygen loss (ROL) from roots of aquatic plants to reduced sediments is thought to deplete the roots of oxygen and restrict the distribution of those species unable to form a barrier to oxygen loss. Metal precipitates with high iron content (Fe-plaques) frequently form on roots of aquatic plants and could create such a diffusion barrier, thereby diverting a larger proportion of downward oxygen transport to the root meristems. * To investigate whether Fe-plaques form a barrier to oxygen loss, ROL and internal oxygen concentrations were measured along the length of roots of the freshwater plant Lobelia dortmanna using platinum sleeve electrodes and Clark-type microelectrodes. * Measurements showed that ROL was indeed lower from roots with Fe-plaques than roots without plaques and that ROL declined gradually with thicker iron coating on roots. The low ROL was caused by low diffusion coefficients through root walls with Fe-plaques resulting in higher internal oxygen concentrations in the root lacunae. * By diverting a larger proportion of downward oxygen transport to root meristems in L. dortmanna, the presence of Fe-plaques should diminish root anoxia and improve survival in reduced sediments.     

New Insights into How Increases in Fertility Improve the Growth of Rice at the Seedling Stage in Red Soil Regions of Subtropical China

The differences in rhizosphere nitrification activities between high- and low- fertility soils appear to be related to differences in dissolved oxygen concentrations in the soil, implying a relationship to differences in the radial oxygen loss (ROL) of rice roots in these soils. A miniaturised Clark-type oxygen microelectrode system was used to determine rice root ROL and the rhizosphere oxygen profile, and rhizosphere nitrification activity was studied using a short-term nitrification activity assay. Rice planting significantly altered the oxygen cycling in the water-soil system due to rice root ROL. Although the oxygen content in control high-fertility soil (without rice plants) was lower than that in control low-fertility soil, high rice root ROL significantly improved the rhizosphere oxygen concentration in the high-fertility soil. High soil fertility improved the rice root growth and root porosity as well as rice root ROL, resulting in enhanced rhizosphere nitrification. High fertility also increased the content of nitrification-induced nitrate in the rhizosphere, resulting in enhanced ammonium uptake and assimilation in the rice. Although high ammonium pools in the high-fertility soil increased rhizosphere nitrification, rice root ROL might also contribute to rhizosphere nitrification improvement. This study provides new insights into the reasons that an increase in soil fertility may enhance the growth of rice. Our results suggest that an amendment of the fertiliser used in nutrient- and nitrification-poor paddy soils in the red soil regions of China may significantly promote rice growth and rice N nutrition.     

Long-distance transport of gases in plants: a perspective on internal aeration and radial oxygen loss from roots

Internal transport of gases is crucial for vascular plants inhabiting aquatic, wetland or flood‐prone environments. Diffusivity of gases in water is approximately 10 000 times slower than in air; thus direct exchange of gases between submerged tissues and the environment is strongly impeded. Aerenchyma provides a low‐resistance internal pathway for gas transport between shoot and root extremities. By this pathway, O₂ is supplied to the roots and rhizosphere, while CO₂, ethylene, and methane move from the soil to the shoots and atmosphere. Diffusion is the mechanism by which gases move within roots of all plant species, but significant pressurized through‐flow occurs in stems and rhizomes of several emergent and floating‐leaved wetland plants. Through‐flows can raise O₂ concentrations in the rhizomes close to ambient levels. In general, rates of flow are determined by plant characteristics such as capacity to generate positive pressures in shoot tissues, and resistance to flow in the aerenchyma, as well as environmental conditions affecting leaf‐to‐air gradients in humidity and temperature. O₂ diffusion in roots is influenced by anatomical, morphological and physiological characteristics, and environmental conditions. Roots of many (but not all) wetland species contain large volumes of aerenchyma (e.g. root porosity can reach 55%), while a barrier impermeable to radial O₂ loss (ROL) often occurs in basal zones. These traits act synergistically to enhance the amount of O₂ diffusing to the root apex and enable the development of an aerobic rhizosphere around the root tip, which enhances root penetration into anaerobic substrates. The barrier to ROL in roots of some species is induced by growth in stagnant conditions, whereas it is constitutive in others. An inducible change in the resistance to O₂ across the hypodermis/exodermis is hypothesized to be of adaptive significance to plants inhabiting transiently waterlogged soils. Knowledge on the anatomical basis of the barrier to ROL in various species is scant. Nevertheless, it has been suggested that the barrier may also impede influx of: (i) soil‐derived gases, such as CO₂, methane, and ethylene; (ii) potentially toxic substances (e.g. reduced metal ions) often present in waterlogged soils; and (iii) nutrients and water. Lateral roots, that remain permeable to O₂, may be the main surface for exchange of substances between the roots and rhizosphere in wetland species. Further work is required to determine whether diversity in structure and function in roots of wetland species can be related to various niche habitats.     

Changes in growth,porosity, and radial oxygen loss from adventitious roots of selected mono‐ and dicotyledonous wetland species with contrasting types of aerenchyma

Growth in stagnant, oxygen‐deficient nutrient solution increased porosity in adventitious roots of two monocotyledonous (Carex acuta and Juncus effusus) and three dicotyledonous species (Caltha palustris, Ranunculus sceleratus and Rumex palustris) wetland species from 10 to 30% under aerated conditions to 20–45%. The spatial patterns of radial oxygen loss (ROL), determined with root‐sleeving oxygen electrodes, indicated a strong constitutive ‘barrier’ to ROL in the basal root zones of the two monocotyledonous species. In contrast, roots of the dicotyledonous species showed no significant ‘barrier’ to ROL when grown in aerated solution, and only a partial ‘barrier’ when grown in stagnant conditions. This partial ‘barrier’ was strongest in C. palustris, so that ROL from basal zones of roots of R. sceleratus and R. palustris was substantial when compared to the monocotyledonous species. ROL from the basal zones would decrease longitudinal diffusion of oxygen to the root apex, and therefore limit the maximum penetration depth of these roots into anaerobic soil. Further studies of a larger number of dicotyledonous wetland species from a range of substrates are required to elucidate the ecophysiological consequences of developing a partial, rather than a strong, ‘barrier’ to ROL.     

Metal accumulation and tolerance in wetland plants

This paper briefly reviews the progress in studies of wetland plants in terms of heavy metal pollution. The current research mainly includes the following areas: (1) metal uptake, translocation, and distributions in wetland plants and toxicological effects on wetland plants, (2) radial oxygen loss (ROL) of wetland plants and its effects on metal mobility in rhizosphere soils, (3) constitutional metal tolerance in wetland plants, and (4) mechanisms of metal tolerance by wetland plants. Although a number of accomplishments have been achieved, many issues still remain unanswered. The future research effort is likely to focus on the ROL of wetland plants affecting metal speciation and bioavailability in rhizosphere soils, and the development of rhizosphere management technologies to facilitate and improve practical applications of phytoremediation of metal-polluted soils.     

Metal accumulation and tolerance in wetland plants

This paper briefly reviews the progress in studies of wetland plants in terms of heavy metal pollution. The current research mainly includes the following areas: (1) metal uptake, translocation, and distributions in wetland plants and toxicological effects on wetland plants, (2) radial oxygen loss (ROL) of wetland plants and its effects on metal mobility in rhizosphere soils, (3) constitutional metal tolerance in wetland plants, and (4) mechanisms of metal tolerance by wetland plants. Although a number of accomplishments have been achieved, many issues still remain unanswered. The future research effort is likely to focus on the ROL of wetland plants affecting metal speciation and bioavailability in rhizosphere soils, and the development of rhizosphere management technologies to facilitate and improve practical applications of phytoremediation of metalpolluted soils.     

Relationships between plant photosynthesis,radial oxygen loss and nutrient removal in constructed wetland microcosms

The objective of this study was to investigate the relationships between root radial oxygen loss (ROL), photosynthesis, and nutrient removal, based on the hypothesis that ROL is primarily an active process which is affected positively by photosynthesis, and is correlated positively with nutrient removal. Four common wetland plants were studied in small-scale monoculture wetlands. Higher ROL coincided with faster growth among the four monocultures. Significant correlation between ROL and photosynthetic rate existed in Cyperus flabelliformis wetland (P < 0.01). Both ROL and photosynthesis represented close correlations with nutrient removal rates in all four monocultures. Significant differences in ROL, photosynthetic rate, removal rates of NH₄⁺, and soluble reactive phosphorus (SRP) were found among the four species. ROL and photosynthetic rates showed single-peak daily and seasonal patterns, with maximum daily values around noon, and with maximum yearly values in summer or autumn for the four monocultures. The results suggest that the ROL of wetland plants is related to active physiological processes. Both ROL and photosynthetic rate are indices which can be used to identify wetland plants with a higher nutrient removal capacity.     

A Re-examination of the Functional Significance of Aerenchyma

Model roots of known length and internal porosity were assayed for ROL (radial oxygen loss) by the cylindrical Pt electrode technique and a series of curves were obtained which express the inter-relationships between ROL and diffusion path length over a wide range of internal porosity levels. The results indicate that internal porosity can exert considerable control on the amount of oxygen lost from roots, the more so the narrower the root. Because radial oxygen loss is necessary for survival and competitiveness, doubt is therefore cast on the currently held view that aerenchyma formation furnishes the wetland plant with an oxygen diffusion pathway excessive to its requirements. The results also suggest that cellular partitions and diaphragms in wetland species may impede gas transport far less than has hitherto been thought.     

Oxygen Distribution in Wetland Plant Roots and Permeability Barriers to Gas-exchange with the Rhizosphere: a Microelectrode and Modelling Study with Phragmites australis

Adventitious roots of intact Phragmites plantlets were securedhorizontally 2–3 mm below the surface of an oxygen-depletedfluid agar across which oxygen-free nitrogen was gently streamedto create a constant oxygen sink; the leafy shoot was fullyexposed to air. Radial oxygen profiles through rhizosphere androot at different distances from the apex were obtained polarographicallyusing Clark-type bevelled microelectrodes servo-driven in stepsof 10 µm (root) or 10–50 µm (rhizosphere).The pattern of radial oxygen loss (ROL) typical of wetland plants,viz. high at the apex and declining sharply sub-apically, wasrelated to synergism between ROL, and oxygen consumption andincreasing impedance to diffusion within the epidermal/hypodermalcylinder rather than to a surface resistance. The smallest oxygendeficit (2 kPa) to develop across the 80 µm thick epidermal/hypodermalcylinder was within the apical 10 mm and was consistent withtissue oxygen diffusivities similar to water. At 100 mm fromthe apex, consumption and impedance had increased the deficitto about 15 kPa and reduced ROL almost to zero. The developingimpedance within the epidermal/hypodermal cylinder was leastin cell layers immediately adjoining the cortex and increasedmost in the hypodermal cell layer abutting the epidermis. Thesub-apical decline in ROL appeared to coincide with the appearanceof aerenchyma in the cortex but thin walled ‘passage areas’(windows) in the hypodermal/epidermal cylinder persisted locallyand remained leaky to oxygen to some degree. It is through thesewindows that lateral roots emerge and the cortex in line withthe windows remains non-aerenchymatous. The radial and longitudinaloxygen profiles were consistent with modelling predictions.The shapes of the stelar oxygen profiles were consistent witha higher oxygen demand in the outer region (viz. pericycle,phloem, protoxylem and early metaxylem cylinder) than in theinner core (late metaxylem cylinder and medulla), but the deficitswere relatively small (