Effect of Water Content on the Glass Transition Temperature of Calcium Maltobionate and its Application to the Characterization of Non-Arrhenius Viscosity Behavior

To understand the fundamental physical properties of calcium maltobionate (MBCa), its water sorption isotherm, glass transition temperature (T _g), and viscosity (η) were investigated and compared with those of maltobionic acid (MBH) and maltose. Although amorphous maltose crystalized at water activity (a _w) higher than 0.43, MBCa and MBH maintained an amorphous state over the whole a _w range. In addition, MBCa had a higher T _g and greater resistance to water plasticizing than MBH and maltose. These properties of MBCa likely originate from the strong interaction between MBCa and water induced by electrostatic interactions. Moreover, the effects of temperature and water content on η of an aqueous MBCa solution were evaluated, and its behavior was described using a semi-empirical approach based on a combination of T _g extrapolated by the Gordon-Taylor equation and a non-Arrhenius formula known as the Vogel–Fulcher–Tammann equation. This result will be useful for understating the effect of MBCa addition on the solution’s properties.     

Water use efficiency in the drought-stressed sorghum and maize in relation to expression of aquaporin genes

Zea mays L. is less tolerant to drought than Sorghum bicolor L. In the present study, we investigated the response of both plants to drought stress applied under field conditions by withholding water for 10 d. The plant growth in terms of shoot fresh and dry masses was more severely reduced in maize than in sorghum, consistently with reduction of leaf relative water content. Gas exchange was also more inhibited by drought in maize than in sorghum. The water use efficiency (WUE) of maize fluctuated during the day and in response to the drought stress. In contrast, sorghum was able to maintain a largely constant WUE during the day in the well-watered plants as well as in the stressed ones. Studying the expression of four aquaporin genes (PIP1;5, PIP1;6, PIP2;3, and TIP1;2) revealed that PIP1;5 in leaves and PIP2;3 in roots were highly responsive to drought in sorghum but not in maize, where they might have supported a greater water transport. The expression pattern of PIP1;6 suggests its possible role in CO₂ transport in control but not droughty leaves of both the plants. TIP1;2 seemed to contribute to water transport in leaves of the control but not droughty plants. We conclude that PIP1;5 and PIP2;3 may have a prominent role in drought tolerance and maintenance of WUE in sorghum plants.     

Generic names in the Orbiliaceae (Orbiliomycetes) and recommendations on which names should be protected or suppressed

A list of all generic names that have been connected with the Orbiliomycetes is provided. Recommendations are made as to which names should be used in accordance with the rules and the different generic concepts. There is a mismatch in the current generic concepts within Orbiliomycetes regarding the two morphs: a narrow concept is used for the asexual morphs, but a broad concept relies on the sexual morphs. As a consequence, many more generic names have been established for the asexual morphs. A number of previous generic concepts are artificial, since they were based on single characters without molecular support. In order to provide solutions for this mismatch, we present three different generic concepts within the Orbiliomycetes. A broad concept recognizes a large genus Orbilia, with which most of the listed names fall into synonymy, but could be maintained as infrageneric names. Due to the lack of data proving phylogenetic relationships, this broad concept, at present, is the most practicable and recommended one. A moderate concept subdivides Orbilia into several genera, with all nematode-trapping fungi merged in Arthrobotrys. A narrow generic concept accepts genera based on differences in trapping organs, but also subdivides the remaining groups of Orbilia into additional genera. Trapping of invertebrates (zoophagy) is not restricted to Arthrobotrys in a broad sense, but occurs also in the more distant basal genera Hyalorbilia and Lecophagus, which mainly prey on rhizopods and rotifers. Whether these predatory capabilities trace back to a common ancestor is not clear. The following new combinations are proposed: Hyalorbilia oviparasitica, Hyalorbilia quadridens, Hyalorbilia tenuifusaria, and Orbilia fissilis.     

Water and nitrogen supply effects on four desert shrubs with potential use for rehabilitation activities

Desert evergreen shrubs, which are adapted to low-fertility ecosystems, generally exhibit limited responses to increased nutrient availability and tend to absorb and store nutrients rather than synthesize new tissues. The objective of this work was to analyze the effect of nitrogen fertilization combined with soil water availability on growth, nitrogen content, and nitrogen use efficiency on four shrubs (Atriplex lampa, Capparis atamisquea, Larrea cuneifolia, and Senecio subulatus) from the Monte Desert. In a 120-day glasshouse experiment in Mendoza, Argentina, we compared the effects of three levels of nitrogen fertilization combined with two levels of water availability on seedling biomass, nitrogen content, water potential, and nitrogen use efficiency. Fertilization induced a higher biomass on A. lampa under high water availability and on C. atamisquea regardless of water level. Shoot:root ratios of these two species were lower under water stress without fertilization. On the other hand, L. cuneifolia presented lower root biomass and lower water potential with N fertilization. All species when fertilized exhibited higher nitrogen content and lower nitrogen use efficiency. Also, A. lampa and L. cuneifolia presented higher nitrogen content under water stress conditions. In conclusion, some desert shrubs (A. lampa and C. atamisquea) were able to take advantage of increased nitrogen availability producing more biomass. Understanding seedlings response to nitrogen and water availability on arid lands is critically important to develop adequate revegetation techniques of degraded areas.     

Water sources and water-use efficiency of desert plants in different habitats in Dunhuang,NW China

To understand habitat associated differences in desert plant water-use patterns, water stable oxygen isotope composition was used to determine water source and leaf carbon isotope composition (δ ¹³C) was used to estimate long-term water-use efficiency in three typical habitats (saline land, sandy land and Gobi) in Dunhuang. The primary findings are: (1) in the three habitats, plant species used mainly deep soil water (>120 cm), except for Kalidium foliatum in the saline land, which relied primarily on 0–40 cm soil water; (2) in the saline land and Gobi habitat, Alhagi sparsifolia had the most negative foliar δ ¹³C; in the sandy land, Elaeagnus angustifolia leaf was enriched in ¹³C than the other three species in 2011, but no species differences in foliar δ ¹³C was observed among the four species in 2012; (3) common species (Tamarix ramosissima and A. sparsifolia) may alter their water sources to cope with habitat differences associated changes in soil water availability with deeper water sources were used in the Gobi habitat with lower soil water content (SWC) compared to in the saline land and sandy land; (4) we detected significant habitat differences in foliar δ ¹³C in A. sparsifolia which may have resulted from differences in SWC and soil electrical conductivity. However, no habitat differences in foliar δ ¹³C were observed in T. ramosissima, which may attribute to the strong genetic control in T. ramosissima or the ability to access stable deep soil water. Overall, the results suggest that extremely arid climate, root distribution and soil properties worked together to determine plant water uptake in Dunhuang area.     

Water availability drives stem growth and stem water deficit of <Emphasis Type="Italic">Pinus canariensis</Emphasis> in a drought-induced treeline in Tenerife

Tree growth of Pinus canariensis at treeline in Tenerife, Canary Islands, is thought to be primarily controlled by wet season precipitation (P) prior to the current year´s growth. Therefore, we investigated the inter-annual variations in stem water deficit (ΔW) and radial growth (RG) during two consecutive years differing in wet season P. ΔW was extracted from stem circumference variations, and the influence of environmental variables was evaluated by Pearson correlation statistics. Wet season P was considerably lower in 2008 than in 2009; despite this difference in P between both years, shallow soil water availability was almost exhausted during both summers. However, the effect of shallow soil drought showing a clear seasonality of ΔW and RG was only detected in 2008. In summer 2009, RG rates were highest during the summer indicating that P. canariensis was able to tap water from deep soil layers originating from P prior to the current year´s growth. The ability to use deep soil water during extended periods of shallow soil water deficit was also reflected in a close positive correlation between RG and whole-tree water use. In our study, the effect of only one hydrological dry year resulted in a severe reduction in annual RG. Thus, when wet season P is low for a number of years, chronic drought may have negative implications for tree growth at treeline in Tenerife.     

Water clearance efficiency indicates potential filter-feeding interactions between invasive <Emphasis Type="Italic">Sinanodonta woodiana</Emphasis> and native freshwater mussels

The Chinese pond mussel (Sinanodonta woodiana Lea, 1834) is a benthic filter-feeder that prefers soft-bottomed freshwater habitats and has successfully spread into both tropical and temperate water bodies outside its natural Southeast Asian range. Due to its preference for nutrient-rich waters with high levels of suspended food particles, the capacity of S. woodiana to influence natural seston concentrations is thought to be relatively low in comparison to that of other invasive bivalves. The experimental quantification of seston removal efficiency reported here demonstrates that S. woodiana is able to reduce seston loads to levels comparable to those by the control native freshwater mussel species Unio tumidus Philipsson, 1788. Moreover, increasing food depletion did not cause detectable changes in the filtration regime of S. woodiana, although the activity of native U. tumidus was significantly reduced. The seston clearance rate (volume of water cleared of particles per unit time) of S. woodiana averaged 9.3 ± 4.0 mL g^?1 wet mass h^?1, which corresponds to the total daily volume of water filtered being up to several hundreds to thousands L m^?2 at the maximal S. woodiana population densities reported in the literature. The observed filtration capacity of S. woodiana and its current invasional spread into areas inhabited by endangered freshwater mussels call for more careful consideration of filter-feeding interactions with native mussels. The potential impacts of S. woodiana should be studied in more detail with respect to available food resources and long-term nutritional needs of native species and reflected in management strategies in the invaded range.     

Generation of acid mine drainage around the Karaerik copper mine (Espiye,Giresun, NE Turkey): implications from the bacterial population in the Acısu effluent

The Karaerik Cu mine is a worked-out deposit with large volumes of tailings and slags which were left around the mine site without any protection. Natural feeding of these material and run-off water from the mineralised zones into the Ac?su effluent causes a serious environmental degradation and creation of acid mine drainage (AMD) along its entire length. This research aims at modelling the formation of AMD with a specific attempt on the characterisation of the bacterial population in association with AMD and their role on its occurrence. Based on 16SrRNA analyses of the clones obtained from a composite water sample, the bacterial community was determined to consist of Acidithiobacillus ferrivorans, Ferrovum myxofaciens, Leptospirillum ferrooxidans and Acidithiobacillus ferrooxidans as iron-oxidising bacteria, Acidocella facilis, Acidocella aluminiidurans, Acidiphilium cryptum and Acidiphilium multivorum as iron-reducing bacteria, and Acidithiobacillus ferrivorans, Acidithiobacillus ferrooxidans, Acidithiobacillus thiooxidans and Acidiphilium cryptum as sulphur-oxidising bacteria. This association of bacteria with varying roles was interpreted as evidence of a concomitant occurrence of sulphur and iron cycles during the generation of AMD along the Ac?su effluent draining the Karaerik mine.     

Modern State of Populations of Endemic <Emphasis Type="Italic">Oxytropis</Emphasis> Species from Baikal Siberia and Their Phylogenetic Relationships Based on Chloroplast DNA Markers

The genetic diversity and population structure of the endemic species of Baikal Siberia Oxytropis triphylla, O. bargusinensis, and O. interposita were studied for the first time on the basis of the nucleotide polymorphism of intergenic spacers psbA–trnH, trnL–trnF, and trnS–trnG of chloroplast DNA. All populations of these species were characterized by a high haplotype (0.762–0.924) and relatively low nucleotide (0.0011–0.0022) diversity. Analysis of the distribution of variability in O. triphylla and O. bargusinensis showed that there was no significant genetic differentiation between populations of each species; the gene flow was 4.43 and 8.91, respectively. The high level of genetic diversity in the studied populations indicates a relatively stable state of these populations. A study of the phylogenetic relationships of closely related species confirms the concept of the origin of O. bargusinensis and O. tompudae as a result of intersectional hybridization of the species of the sections Orobia and Verticillares.     

Taxonomic composition of bacteria associated with cultivated mollusks <Emphasis Type="Italic">Crassostrea lugubris</Emphasis> and <Emphasis Type="Italic">Perna viridis</Emphasis> and with the water of the Gulf of Nha Trang lagoon,Vietnam

One hundred and four strains of heterotrophic bacteria have been isolated and characterized from two species of bivalve mollusks cultivated in the Gulf of Nha Trang (Vietnam) and from the water of a mariculture farm. The isolates have been identified on the basis of morphological, physiological, biochemical, and chemotaxonomic properties, as well as by the content of G+C bases in DNA. In the microflora of mollusks, Vibrio alginolyticus was predominant; the pathogenic species V. harveyi and V. splendidus were found as well. Staphylococci and bacilli occupied the second place in abundance after vibrios. In addition, coryneforms and enterobacteria, as well as Pseudomonas spp. and Pseudoalteromonas spp., were revealed. The composition of the water microflora was more diverse as compared with the microflora of mollusks. In the water, Bacillus spp., Vibrio spp., and Pseudomonas spp. were predominant. Brevibacterium spp. and other coryneform bacteria, as well as enterobacteria, occurred in significant amounts. In addition, Pseudoalteromonas spp., Marinococcus sp., Halobacillus sp., Shewanella sp., Sulfitobacter sp., and bacteria of the CFB cluster were noticed. The presence of pathogenic and conditionally pathogenic bacterial species in the water and mollusks is probably the reason for the high death rate of cultivated animals at the mariculture farm.     

Water mite (Acari: Hydrachnidia) diversity and distribution in undisturbed Dinaric karst springs

Large undisturbed karst springs in the Dinaric region are particularly interesting and extremely valuable and rare ecosystems, housing diverse and yet undiscovered water mite species. The complex life history traits of water mites include several life stages that are interconnected with other freshwater arthropod groups, making them important components of freshwater fauna. This study examined whether the differences in water mite assemblages between Mediterranean and alpine karst springs were driven by seasonal and/or regional changes in environmental conditions. The first ecological data on water mite dynamics and distribution in the Dinaric region of Croatia are presented. Water mites were represented by 11 taxa, decreasing in taxon richness from alpine to Mediterranean springs. Spatial patterns of water mite assemblages at the regional scale were best explained by water temperature, dissolved oxygen and water velocity. Pseudotorrenticola rhynchota and Oxus setosus were exclusively found in springs with higher water temperature and velocity, whereas the genera Aturus sp. and Woolastookia rotundifrons were exclusively recorded in the alpine springs, where oxygen concentrations were significantly higher. Atractides sp., Lebertia sp. and Sperchon sp. were recorded in most springs. Water mite abundances had a summer peak in the Mediterranean region, whereas two smaller peaks were observed in the spring and fall in the alpine region. Regional differences in the seasonality of water mite abundance were most likely patterned by the emergence of insect crenofauna.     

Germination of spores of mycelial fungi in relation to exogenous dormancy

Comparative analysis of germination of asexual sporulation spores (conidia and sporangiospores) and of specific features of dormancy release was carried out for ascomycete mycelial fungi Aspergillus tamarii VKM F-64 and A. sydowii VKM F-441, as well as for zygomycete fungi Cunninghamella echinulata VKM F-663 and Umbelopsis ramanniana VKM F-582. The spores of these strains were shown to be in a state of exogenous dormancy and differed in lag phase duration and germination rate, which depended on the presence of nutrients in the medium. Only the strain C. echinulata VKM F-663 exhibited 100% spore germination, with the germination rate and lag phase duration not depending on the composition of the medium. While in A. tamarii strain VKM F-64, the total number of spores germinating on rich and poor media was also almost the same, in the absence of nutrients lag phase duration increased and the germination rate decreased. For strains U. ramanniana VKM F-582 and A. sydowii VKM F-441, the degree of spore germination in the absence of nutrients in the medium was considerably lower than on the rich medium, while the lag phase was longer. These data indicate that the spores of C. echinulata VKM F-663 are in the state of exogenous dormancy, which does not require for release any compounds except water. The spores of U. ramanniana strain VKM F-582 and of the Aspergillus strains exhibited another variant of exogenous dormancy, which required for release, apart from water, also the sources of carbon and nitrogen. Thus, the character of dormancy release may differ even within a single genus (Aspergillus).     

A taxonomic and phylogenetic study of the <Emphasis Type="Italic">Golovinomyces biocellatus</Emphasis> complex (Erysiphales,Ascomycota) using asexual state morphology and rDNA sequence data

The Golovinomyces biocellatus complex consists of powdery mildew (Erysiphales) species restricted to hosts of the family Lamiaceae. Previous authors used minor morphological features of the sexual state and host range data to split the complex. The data, however, were not sufficient to define a convincing species concept. Our taxonomic study is based on molecular phylogenetic and asexual state morphology data. For morphological studies, mainly features of the asexual morph (conidiophores, conidia, germination patterns) were studied using light and scanning electron microscopy. Detailed line drawings of asexual state features are provided. For phylogenetic analyses, two markers (rDNA: ITS, LSU) of 64 specimens were applied. The phylogeny resulted in two major clades. Clade I consists of specimens with Lamiaceae hosts and three specimens of Verbena. Clade II consists of two sister groups, the first (IIa) with Salvia spp. and the second (IIb) with Lycopus europaeus (the type host G. biocellatus) and Glechoma. Clades I and IIb and two subclades of IIa with Salvia hosts are characterized by specific morphological traits (differences in conidiophore length, conidial shape, width, and germination patterns). Based on these data, we suggest to consider specimens of clades I (including specimens on Verbena) and IIb and the two subclades of IIa as distinct species, namely G. monardae, G. biocellatus, G. salviae, and G. neosalviae sp. nov. A key for the identification of species based on asexual state features is provided. The results are discussed with respect to host range, jumps, co-evolutionary aspects, and distribution patterns.     

Interaction of the amyloid <Emphasis Type="Italic">β</Emphasis> peptide with sodium dodecyl sulfate as a membrane-mimicking detergent

The amyloid β (A β) peptide is important in the context of Alzheimer’s disease, since it is one of the major components of the fibrils that constitute amyloid plaques. Agents that can influence fibril formation are important, and of those, membrane mimics are particularly relevant, because the hydrophobic part of A β suggests a possible membrane activity of the peptide. We employed spin-label EPR to investigate the aggregation process of A β1–40 in the presence of the sodium dodecyl sulfate (SDS) detergent as a membrane-mimicking agent. In this work, the effect of SDS on A β is studied using two positions of spin label, the N-terminus and position 26. By comparing the two label positions, the effect of local mobility of the spin label is eliminated, revealing A β aggregation in the SDS concentration regime below the critical micelle concentration (CMC). We demonstrate that, at low SDS concentrations, the N-terminus of A β participates in the solubilization, most likely by being located at the particle–water interface. At higher SDS concentrations, an SDS-solubilized state that is a precursor to the one A β/micelle state above the CMC of SDS prevails. We propose that A β is membrane active and that aggregates include SDS. This study reveals the unique potential of EPR in studying A β aggregation in the presence of detergent.     

Detection of <Emphasis Type="Italic">Helicobacter</Emphasis> DNA in different water sources and penguin feces from Greenwich,Dee and Barrientos Islands,Antarctica

Helicobacter spp. colonize the gastrointestinal tract of humans and animals and have been associated with gastrointestinal diseases. Antarctic habitats are considered pristine ecosystems, but the increase in human activity could be introducing human bacteria hosted into waters and wildlife. However, Helicobacter spp. occurrence has not been studied in Antarctica. The aim of our study was to detect the Helicobacter DNA in different water sources and penguin feces from Greenwich, Dee and Barrientos Islands during summer of 2012 and 2013. High Helicobacter proportion was observed in water sources amplifying the 16S rRNA (33/40) and 23S rRNA genes (37/40) by semi-nested PCR. Similar results were observed in feces from Gentoo penguins (16S rRNA: 32/39, and 23S rRNA: 28/39) and Chinstrap penguins (16S rRNA: 16/17, and 23S rRNA: 15/17) by PCR. The phylogenetic relationship of 16S rRNA and 23S rRNA sequences from penguin feces was closely related to Helicobacter brantae. Analyses of 16S rRNA sequences showed that the majority of water samples are related to penguin (3/6) and Helicobacter pylori (2/6) sequences, but the 23S rRNA sequences matched with Campylobacter and Arcobacter. These results show for the first time the presence of the genus Helicobacter in different Antarctica water sources and in Gentoo and Chinstrap penguin feces. A few 16S rRNA sequences are very closely related to H. pylori, but specific glmM and ureA H. pylori genes were not detected. More studies are needed to determine the Helicobacter species present in this ecosystem and to establish the human impact in these Antarctic Islands.     

Impacts on Micro- and Macro-Structure of Thermally Stabilised Whey Protein-Pectin Complexes: A Fluorescence Approach

Stability of whey protein-pectin complexes is an essential criterion for their application in different food matrices. The impact of process parameters on micro- and macro-structural characteristics of thermally stabilised whey protein-pectin complexes was investigated using fluorescence spectroscopy, ζ-potential measurements, dynamic light scattering and phase separation. Complexes prepared from whey protein isolate (WPI) and pectins with different degrees of esterification (HMP, LMP) were generated at different biopolymer concentrations (WPI + pectin: 5.0 % + 1.0 %, c _{h i g h} ; 2.75 % + 0.55 %, c _{m e d} ; 0.5 % + 0.1 %, c _{l o w} ), heating temperatures (80-90^°C) and pH levels (6.1-4.0). Micro- and macro-structural characteristics of the complexes depended on concentration level and degree of esterification, with complexes being more sensitive towards environmental changes at c _{l o w} than at c _{m e d} and c _{h i g h} . WPI-LMP complexes exhibited sizes <1 μm suitable for micro-encapsulation, whereas WPI-HMP complexes at c _{m e d} achieved sizes from 1-10 μm and at c _{h i g h} from 10-200 μm underlining their potential as fat-replacers and structuring agents, respectively. Slopes and intercepts derived from intensity ratios of fluorescence spectra gave insights into the state of unfolding of β-lactoglobulin within the complexes and thus about the protective effect of pectin addition.     

Evolution of errantiviruses of <Emphasis Type="Italic">Drosophila melanogaster</Emphasis>. Strategy 2: From retroviruses to retrotransposons

Drosophila melanogaster retrotransposons of the gypsy group are considered to be potential errantiviruses. Their infectivity is caused by the functional activity of the third open reading frame (ORF3) encoding the Env protein, which was probably captured from baculoviruses. Mobile genetic elements (MGEs) of the gypsy group can be conventionally divided into three subgroups: with three ORFs, with a defective ORF3, and without the ORF3. To establish the patterns of evolution of gypsy retrotransposons in D. melanogaster, the members of the three subgroups were examined. Structural analysis of retrotransposons opus and rover, which carry a defective ORF3, as well as retrotransposons Burdock, McClintock, qbert, and HMS-Beagle, which lack the ORF3, suggests that the evolution of these MGEs followed the pattern of loosing the ORF3. At the same time, an MGE of the same subgroup, Transpac, may be an ancestral form, which had acquired the env gene and gave rise to the first errantiviruses. The capture of the ORF3 by retrotransposons provided their conversion to a fundamentally new state. However, the ORF3 in the genome is not subjected to strong selective pressure, because it is not essential for intragenomic transpositions. Because of this, the process of its gradual loss seems quite natural.