Lipid Peroxide-Derived Short-Chain Carbonyls Mediate Hydrogen Peroxide-Induced and Salt-Induced Programmed Cell Death in Plants

Lipid peroxide-derived toxic carbonyl compounds (oxylipin carbonyls), produced downstream of reactive oxygen species (ROS), were recently revealed to mediate abiotic stress-induced damage of plants. Here, we investigated how oxylipin carbonyls cause cell death. When tobacco (Nicotiana tabacum) Bright Yellow-2 (BY-2) cells were exposed to hydrogen peroxide, several species of short-chain oxylipin carbonyls [i.e. 4-hydroxy-(E)-2-nonenal and acrolein] accumulated and the cells underwent programmed cell death (PCD), as judged based on DNA fragmentation, an increase in terminal deoxynucleotidyl transferase dUTP nick end labeling-positive nuclei, and cytoplasm retraction. These oxylipin carbonyls caused PCD in BY-2 cells and roots of tobacco and Arabidopsis (Arabidopsis thaliana). To test the possibility that oxylipin carbonyls mediate an oxidative signal to cause PCD, we performed pharmacological and genetic experiments. Carnosine and hydralazine, having distinct chemistry for scavenging carbonyls, significantly suppressed the increase in oxylipin carbonyls and blocked PCD in BY-2 cells and Arabidopsis roots, but they did not affect the levels of ROS and lipid peroxides. A transgenic tobacco line that overproduces 2-alkenal reductase, an Arabidopsis enzyme to detoxify α,β-unsaturated carbonyls, suffered less PCD in root epidermis after hydrogen peroxide or salt treatment than did the wild type, whereas the ROS level increases due to the stress treatments were not different between the lines. From these results, we conclude that oxylipin carbonyls are involved in the PCD process in oxidatively stressed cells. Our comparison of the ability of distinct carbonyls to induce PCD in BY-2 cells revealed that acrolein and 4-hydroxy-(E)-2-nonenal are the most potent carbonyls. The physiological relevance and possible mechanisms of the carbonyl-induced PCD are discussed.In plants, environmental stressors such as extreme temperatures, drought, intense UV-B radiation, and soil salinity can cause tissue damage, growth inhibition, and even death. These detrimental effects are often ascribed to the action of reactive oxygen species (ROS) produced in the stressed plants for the following reasons: (1) various environmental stressors commonly cause the oxidation of biomolecules in plants; and (2) transgenic plants with enhanced antioxidant capacities show improved tolerance to environmental stressors (Suzuki et al., 2014). The production of ROS such as superoxide anion radical and hydrogen peroxide (H₂O₂) is intrinsically associated with photosynthesis and respiration (Foyer and Noctor, 2003; Asada, 2006).Plant cells are equipped with abundant antioxidant molecules such as α-tocopherol, β-carotene, and ascorbic acid and an array of ROS-scavenging enzymes such as superoxide dismutase and ascorbate peroxidase to maintain low intracellular ROS levels. When plants are exposed to severe and prolonged environmental stress, the balance between the production and scavenging of ROS is disrupted and the cellular metabolism reaches a new state of higher ROS production and lower antioxidant capacity. Then, the oxidation of vital biomolecules such as proteins and DNA proceeds, and as a consequence, cells undergo oxidative injury (Mano, 2002). The cause-effect relationship between ROS and tissue injury in plants is thus widely accepted, but the biochemical processes between the generation of ROS and cell death are poorly understood.Increasing evidence shows that oxylipin carbonyls mediate the oxidative injury of plants (Yamauchi et al., 2012; for review, see Mano, 2012; Farmer and Mueller, 2013). Oxylipin carbonyls are a group of carbonyl compounds derived from oxygenated lipids and fatty acids. The production of oxylipin carbonyls in living cells is explained as follows. Lipids in the membranes are constitutively oxidized by ROS to form lipid peroxides (LOOHs; Mène-Saffrané et al., 2007) because they are the most immediate and abundant targets near the ROS production sites. There are two types of LOOH formation reaction from ROS (Halliwell and Gutteridge, 2007). One is the radical-dependent reaction. Highly oxidizing radicals, such as hydroxyl radical (standard reduction potential of the HO^•/H₂O pair, +2.31 V) and the protonated form of superoxide radical (HO₂/H₂O₂, +1.06 V), can abstract a hydrogen atom from a lipid molecule, especially at the central carbon of a pentadiene structure in a polyunsaturated fatty acid, to form a radical. This organic radical rapidly reacts with molecular oxygen, forming a lipid hydroperoxyl radical, which then abstracts a hydrogen atom from a neighboring molecule and becomes a LOOH. The other reaction is the addition of singlet oxygen to a double bond of an unsaturated fatty acid to form an endoperoxide or a hydroperoxide (both are LOOHs). A variety of LOOH species are formed, depending on the source fatty acid and also by the oxygenation mechanism (Montillet et al., 2004). LOOH molecules are unstable, and in the presence of redox catalysts such as transition metal ions or free radicals, they decompose to form various aldehydes and ketones (i.e. oxylipin carbonyls; Farmer and Mueller, 2013). The chemical species of oxylipin carbonyl formed in the cells differ according to the fatty acids and the type of ROS involved (Grosch, 1987; Mano et al., 2014a).More than a dozen species of oxylipin carbonyls are formed in plants (for review, see Mano et al., 2009). Oxylipin carbonyls are constitutively formed in plants under normal physiological conditions, and the levels of certain types of oxylipin carbonyls rise severalfold under stress conditions, detected as increases in the free carbonyl content (Mano et al., 2010; Yin et al., 2010; Kai et al., 2012) and by the extent of the carbonyl modification of target proteins (Winger et al., 2007; Mano et al., 2014b). Among the oxylipin carbonyls, the α,β-unsaturated carbonyls, such as acrolein and 4-hydroxy-(E)-2-nonenal (HNE), have high reactivity and cytotoxicity (Esterbauer et al., 1991; Alméras et al., 2003). They strongly inactivate lipoate enzymes in mitochondria (Taylor et al., 2002) and thiol-regulated enzymes in chloroplasts (Mano et al., 2009) in vitro and cause tissue injury in leaves when they are fumigated (Matsui et al., 2012).The physiological relevance of oxylipin carbonyls has been shown by the observation that the overexpression of different carbonyl-scavenging enzymes commonly confers stress tolerance to transgenic plants (for review, see Mano, 2012). For example, 2-alkenal reductase (AER)-overproducing tobacco (Nicotiana tabacum) showed tolerance to aluminum (Yin et al., 2010), aldehyde dehydrogenase-overproducing Arabidopsis (Arabidopsis thaliana) showed tolerance to osmotic and oxidative stress (Sunkar et al., 2003), and aldehyde reductase-overproducing tobacco showed tolerance to chemical and drought stress (Oberschall et al., 2000). In addition, the genetic suppression of a carbonyl-scavenging enzyme made plants susceptible to stressors (Kotchoni et al., 2006; Shin et al., 2009; Yamauchi et al., 2012; Tang et al., 2014). Under stress conditions, there are positive correlations between the levels of certain carbonyls and the extent of tissue injury (Mano et al., 2010; Yin et al., 2010; Yamauchi et al., 2012). Thus, it is evident that oxylipin carbonyls, downstream products of ROS, are causes of oxidative damage in plant cells.To investigate how oxylipin carbonyls damage cells in oxidatively stressed plants, we here examined the mode of cell death that is induced by oxylipin carbonyls and identified the carbonyl species responsible for the cell death. We observed that oxylipin carbonyls cause programmed cell death (PCD), and our results demonstrated that the oxylipin carbonyls mediate the oxidative stress-induced PCD in tobacco Bright Yellow-2 (BY-2) cultured cells and in roots of tobacco and Arabidopsis plants. We then estimated the relative strengths of distinct carbonyl species to initiate the PCD program. Our findings demonstrate a critical role of the lipid metabolites in ROS signaling.     

Functional Convergence of Oxylipin and Abscisic Acid Pathways Controls Stomatal Closure in Response to Drought

Membranes are primary sites of perception of environmental stimuli. Polyunsaturated fatty acids are major structural constituents of membranes that also function as modulators of a multitude of signal transduction pathways evoked by environmental stimuli. Different stresses induce production of a distinct blend of oxygenated polyunsaturated fatty acids, “oxylipins.” We employed three Arabidopsis (Arabidopsis thaliana) ecotypes to examine the oxylipin signature in response to specific stresses and determined that wounding and drought differentially alter oxylipin profiles, particularly the allene oxide synthase branch of the oxylipin pathway, responsible for production of jasmonic acid (JA) and its precursor 12-oxo-phytodienoic acid (12-OPDA). Specifically, wounding induced both 12-OPDA and JA levels, whereas drought induced only the precursor 12-OPDA. Levels of the classical stress phytohormone abscisic acid (ABA) were also mainly enhanced by drought and little by wounding. To explore the role of 12-OPDA in plant drought responses, we generated a range of transgenic lines and exploited the existing mutant plants that differ in their levels of stress-inducible 12-OPDA but display similar ABA levels. The plants producing higher 12-OPDA levels exhibited enhanced drought tolerance and reduced stomatal aperture. Furthermore, exogenously applied ABA and 12-OPDA, individually or combined, promote stomatal closure of ABA and allene oxide synthase biosynthetic mutants, albeit most effectively when combined. Using tomato (Solanum lycopersicum) and Brassica napus verified the potency of this combination in inducing stomatal closure in plants other than Arabidopsis. These data have identified drought as a stress signal that uncouples the conversion of 12-OPDA to JA and have revealed 12-OPDA as a drought-responsive regulator of stomatal closure functioning most effectively together with ABA.To colonize a diverse range of environments successfully, plants have developed converging functional pathways to synthesize an array of secondary metabolites for their protection against hostile conditions. For example, in response to environmental challenges, the oxylipin pathway induces the de novo synthesis of biologically active compounds called “oxylipins,” derivatives of oxygenated polyunsaturated fatty acids (Feussner and Wasternack, 2002; Howe and Schilmiller, 2002). Among the oxylipin pathways, the enzymes allene oxide synthase (AOS) and hydroperoxide lyase (HPL) are considered to partition two major branches that compete for the same substrates and are critical plant stress response pathways (Chehab et al., 2008).Production of the AOS pathway metabolites 12-oxo-phytodienoic acid (12-OPDA) and jasmonic acid (JA) originates from α-linolenic acid of chloroplast membranes (Feussner and Wasternack, 2002). Oxygenation of α-linolenic acid by a 13-lipoxygenase followed by the action of AOS forms an unstable allene oxide that is subsequently cyclized by an allene oxide cyclase to form 12-OPDA (Stenzel et al., 2012). 12-OPDA is the end product of the plastid-localized part of the pathway (Stintzi and Browse, 2000; Schaller and Stintzi, 2009). 12-OPDA is then translocated to the peroxisome where it is reduced by 12-OPDA reductase3 (OPR3) and subsequently activated by CoA ester prior to undergoing three rounds of β-oxidation to form JA (Schaller et al., 2000; Koo et al., 2006; Kienow et al., 2008). 12-OPDA is also a signaling molecule with both overlapping and distinct functions from JA. The Arabidopsis (Arabidopsis thaliana) opr3 mutant is deficient in JA synthesis but accumulates 12-OPDA and displays wild-type resistance to the dipteran Bradysia impatiens and to the fungal pathogen Alternaria brassicicola, generally considered JA-dependent responses (Stintzi et al., 2001). In addition, expression studies have identified genes induced by 12-OPDA but not by JA or methyl jasmonate (MeJA; Kramell et al., 2000; Stintzi et al., 2001; Taki et al., 2005; Ribot et al., 2008). These studies collectively show that 12-OPDA mediates gene expression with or without the canonical JA signaling framework (Stintzi et al., 2001; Taki et al., 2005; Ribot et al., 2008).The HPL branch of the oxylipin pathway produces aldehydes and corresponding alcohols. The first enzyme in the pathway is encoded by one or more HPL genes, differing in their subcellular localization, including microsomes (Pérez et al., 1999), lipid bodies (Mita et al., 2005), and the outer envelope of chloroplasts (Froehlich et al., 2001), and in some cases, with no specific localization in a particular organelle (Noordermeer et al., 2000). This variation in the number of genes and subcellular localization of their encoded enzymes is suggestive of the differential regulation of this pathway and, ultimately, the diversity of their responses, potentially tailored to the nature of stimuli.We have previously identified three rice (Oryza sativa) HPLs (HPL1 through HPL3) differing in their enzyme kinetics and substrate preference. Expression of these enzymes in Arabidopsis accession Columbia (Col-0), a natural hpl loss-of-function mutant, reestablished the production of the pathway metabolites (Chehab et al., 2006) and revealed the key role of HPL-derived metabolites in plant stress signaling (Chehab et al., 2008).The HPL and AOS branches of the oxylipin pathway do not function independently; the signaling crosstalk between them is key to fine tuning plant adaptive responses to a diverse range of perturbations (Halitschke et al., 2004; Liu et al., 2012; Scala et al., 2013).To gain deeper insight into the role of AOS- and HPL-derived metabolites in fine-tuning plant stress responses, we have (1) characterized the corresponding oxylipin signatures in response to wounding and drought in three Arabidopsis ecotypes, (2) generated a range of transgenic lines that produce varying blends of oxylipins tailored to the nature of the stress, (3) elucidated a JA-independent role for 12-OPDA in enhanced drought tolerance in part via regulation of stomatal aperture, and (4) reexamined the 12-OPDA-mediated regulation of stomatal aperture, alone or in combination with abscisic acid (ABA) in the model system Arabidopsis as well as in two crop species, namely tomato (Solanum lycopersicum) and Brassica napus. Unexpectedly, these analyses have identified drought as a stress signal that uncouples the conversion of 12-OPDA to JA and have revealed that 12-OPDA is a previously unrecognized regulator of stomatal closure in response to drought. This function of 12-OPDA, however, is most effective when combined with ABA, a phytohormone known to be essential for plant-adaptive responses to drought stress (Seki et al., 2007).     

Brassinosteroid Regulates Cell Elongation by Modulating Gibberellin Metabolism in Rice

Brassinosteroid (BR) and gibberellin (GA) are two predominant hormones regulating plant cell elongation. A defect in either of these leads to reduced plant growth and dwarfism. However, their relationship remains unknown in rice (Oryza sativa). Here, we demonstrated that BR regulates cell elongation by modulating GA metabolism in rice. Under physiological conditions, BR promotes GA accumulation by regulating the expression of GA metabolic genes to stimulate cell elongation. BR greatly induces the expression of D18/GA3ox-2, one of the GA biosynthetic genes, leading to increased GA₁ levels, the bioactive GA in rice seedlings. Consequently, both d18 and loss-of-function GA-signaling mutants have decreased BR sensitivity. When excessive active BR is applied, the hormone mostly induces GA inactivation through upregulation of the GA inactivation gene GA2ox-3 and also represses BR biosynthesis, resulting in decreased hormone levels and growth inhibition. As a feedback mechanism, GA extensively inhibits BR biosynthesis and the BR response. GA treatment decreases the enlarged leaf angles in plants with enhanced BR biosynthesis or signaling. Our results revealed a previously unknown mechanism underlying BR and GA crosstalk depending on tissues and hormone levels, which greatly advances our understanding of hormone actions in crop plants and appears much different from that in Arabidopsis thaliana.     

Crystal Structures of Physcomitrella patens AOC1 and AOC2: Insights into the Enzyme Mechanism and Differences in Substrate Specificity

In plants, oxylipins regulate developmental processes and defense responses. The first specific step in the biosynthesis of the cyclopentanone class of oxylipins is catalyzed by allene oxide cyclase (AOC) that forms cis(+)-12-oxo-phytodienoic acid. The moss Physcomitrella patens has two AOCs (PpAOC1 and PpAOC2) with different substrate specificities for C₁₈- and C₂₀-derived substrates, respectively. To better understand AOC’s catalytic mechanism and to elucidate the structural properties that explain the differences in substrate specificity, we solved and analyzed the crystal structures of 36 monomers of both apo and ligand complexes of PpAOC1 and PpAOC2. From these data, we propose the following intermediates in AOC catalysis: (1) a resting state of the apo enzyme with a closed conformation, (2) a first shallow binding mode, followed by (3) a tight binding of the substrate accompanied by conformational changes in the binding pocket, and (4) initiation of the catalytic cycle by opening of the epoxide ring. As expected, the substrate dihydro analog cis-12,13S-epoxy-9Z,15Z-octadecadienoic acid did not cyclize in the presence of PpAOC1; however, when bound to the enzyme, it underwent isomerization into the corresponding trans-epoxide. By comparing complex structures of the C₁₈ substrate analog with in silico modeling of the C₂₀ substrate analog bound to the enzyme allowed us to identify three major molecular determinants responsible for the different substrate specificities (i.e. larger active site diameter, an elongated cavity of PpAOC2, and two nonidentical residues at the entrance of the active site).Oxylipins comprise a large family of oxidized fatty acids and metabolites thereof (Acosta and Farmer, 2010). They are abundant in mammals (Funk, 2001) and flowering plants (Creelman and Mulpuri, 2002). In addition, they have been found in fungi (Brodhun and Feussner, 2011) as well as in nonflowering plants like mosses and algae (Andreou et al., 2009). In plants, these lipids serve as signaling molecules regulating developmental processes and mediating defense reactions (Howe and Jander, 2008; Browse, 2009; Acosta and Farmer, 2010). The first committed step in oxylipin biosynthesis is the peroxidation of a polyunsaturated fatty acid containing a 1Z,4Z-pentadiene system by lipoxygenase (LOX) or the peroxidation at the C2 position of a fatty acid by α-dioxygenase. These reactions start the so-called LOX or oxylipin pathway (Feussner and Wasternack, 2002) and are followed by further enzymatic reactions in which the hydroperoxy fatty acid is converted to a set of different secondary products. In the case of LOX-derived hydroperoxy fatty acids, such conversions are mainly catalyzed by members of the cytochrome P450 subfamily Cyp74 (i.e. fatty acid hydroperoxide lyase, divinyl ether synthase, epoxy alcohol synthase, and allene oxide synthase [AOS]; Stumpe and Feussner, 2006; Lee et al., 2008). Additional conversions of the fatty acid hydroperoxide are catalyzed by other proteins, such as LOX or peroxygenase (Mosblech et al., 2009).Jasmonic acid (JA) biosynthesis is one specific branch of the oxylipin pathway. It may start with the release of α-linolenic acid [18:3(n-3)] from membrane lipids by a lipase (Schaller and Stintzi, 2009). This free fatty acid is subsequently oxidized by a 13-LOX to yield 13-hydroperoxy octadecatrienoic acid (13-HPOTE) and converted by the action of AOS into the unstable allene oxide 12,13S-epoxy-9Z,11E,15Z-octadecatrienoic acid (12,13-EOT; Fig. 1). 12,13-EOT is then cyclized by allene oxide cyclase (AOC) to the cyclopentenone derivative cis(+)-12-oxo-phytodienoic acid [cis(+)-OPDA]. In the absence of AOC, the epoxide is hydrolyzed into ketols and racemic 12-oxo-phytodienoic acid (OPDA). cis(+)-OPDA is the first cyclic and biologically active compound in that pathway (Dave and Graham, 2012). While the reactions leading from 18:3(n-3) to cis(+)-OPDA occur in the plastid, all further enzymatic steps resulting in the formation of JA are localized in the peroxisomes (Wasternack, 2007). Here, cis(+)-OPDA is reduced in a NADPH-dependent reaction by cis(+)-OPDA reductase isoform 3 to 3-oxo-2(2′Z-pentenyl)-cyclopentane-1-octanoic acid. This step is followed by activation of the carboxyl group and three steps of β-oxidation and finally leads to the formation of (+)-7-iso-JA (Dave and Graham, 2012).Open in a separate windowFigure 1.Overview of the enzymatic steps in JA biosynthesis with molecular focus (box) on the reaction catalyzed by AOC. JA biosynthesis may start with the release of 18:3(n-3) or roughanic acid from a lipid. Next, the fatty acid is oxidized by a 13-LOX, yielding the 13-hydroperoxy derivative. This serves as a substrate for a subsequent conversion catalyzed by AOS and AOC, yielding the cyclopentenone derivatives cis(+)-OPDA and cis(+)-dinorOPDA, respectively, via an unstable allene oxide. Cyclization of the allene oxide seems to be initiated by one particular Glu residue in the active site of AOC that leads to an opening of the epoxy ring, conformational changes, and a concerted pericyclic ring closure (details are explained in the text). After reduction of the cyclopentenone by cis(+)-OPDA reductase isoform 3 (OPR3), the octanoic or hexanoic side chain is shortened by β-oxidation cycles.The conversion of 13-HPOTE into cis(+)-OPDA was first observed using a flaxseed (Linum usitatissimum) acetone powder preparation and was suggested to take place via a hypothetical epoxide intermediate (Vick et al., 1980). Later studies unequivocally demonstrated that 12,13-EOT (Hamberg, 1987; Brash et al., 1988), an allene oxide formed from 13-HPOTE by AOS (Song and Brash, 1991; Song et al., 1993), serves as substrate for the cyclization reaction catalyzed by AOC (Hamberg and Fahlstadius, 1990). The enzyme was purified (Ziegler et al., 1997), characterized with regard to the substrate specificity (Ziegler et al., 1999), and cloned and recombinantly expressed (Ziegler et al., 2000; Stenzel et al., 2003). In 2006, the crystal structure of an AOC from Arabidopsis (Arabidopsis thaliana; AtAOC2) was solved (Hofmann et al., 2006), and the reaction mechanism as well as the subcellular localization were studied (Schaller et al., 2008). The enzyme crystallized as a homotrimer, with each subunit forming an eight-stranded antiparallel β-barrel harboring a hydrophobic cavity in which the active site of the enzyme is located. While the exterior loops showed a high degree of flexibility, the central part of the enzyme was very rigid, and no induced-fit mechanism could be observed upon binding of a substrate analog (Hofmann et al., 2006). Based on the structure of AtAOC2 in complex with vernolic acid [cis(+/−)-12,13-epoxy-9Z-octadecenoic acid (12,13-EOM)] as an inert substrate analog, the following reaction mechanism has been proposed (Fig. 1, box): the allene oxide substrate binds with its fatty acid backbone deep in the barrel, where it interacts with hydrophobic amino acid residues, while the polar carboxy head group is located on the exterior of the cavity. One particular Glu residue (Glu-23 in AtAOC2) pointing to the Δ^15Z-double bond of the substrate may induce a partial charge separation that leads to a delocalization of the π-electron system, thereby facilitating opening of the epoxide ring. The oxyanion thus formed is stabilized via polar interactions with a catalytic, structurally conserved water molecule that is positioned in the polar cavity of the enzyme formed by two Asn residues (Asn-25 and Asn-53 in AtAOC2, respectively), one Ser (Ser-31 in AtAOC2), and one Pro (Pro-32 in AtAOC2). The ring closure that leads to the formation of the cyclopentenone derivative is achieved by a conformational reorganization of the C10-C11 substrate bond from the trans- to the cis-geometry. Due to steric limitations in the active site, this rotation may be accompanied by a cis/trans-isomerization of the C8-C9 substrate bond. Since the enzyme dictates the stereochemistry of the final ring closure, the released product is exclusively the (+)-enantiomer, cis(+)-OPDA (Schaller et al., 2008). Notably, this reaction competes with the spontaneous decomposition of the allene oxide substrate that leads to the formation of racemic OPDA as well as α-ketols and γ-ketols. This hints toward a low-energy barrier of the cyclization reaction and suggests that AOC does not need much of a catalytic functionality in terms of lowering this barrier (Schaller and Stintzi, 2009). It has been proposed that the enzymatic cyclization reaction is achieved according to the rules of Hoffmann and Woodward (1970) via a concerted pericyclic ring closure while spontaneous cyclization proceeds through a dipolar ring closure (Grechkin et al., 2002). The facts that the allene oxide formed by AOS has a very short half-life in aqueous solution and that natural OPDA is found in its enantiopure cis(+)-configuration suggest that AOS and AOC are coupled. However, no physical interaction of both enzymes may be necessary to form cis(+)-OPDA in vitro (Zerbe et al., 2007).Recently, it was shown that the moss Physcomitrella patens harbors and metabolizes not only C₁₈ but also C₂₀ polyunsaturated fatty acids to form oxylipins (Fig. 2; Stumpe et al., 2010). In particular, it was shown that (12S)-hydroperoxy eicosatetraenoic acid (12-HPETE) is endogenously formed by a bifunctional LOX as the major hydroperoxy fatty acid of arachidonic acid [20:4(n-6)] (Wichard et al., 2004). 12-HPETE serves as a substrate for further conversions either leading to the formation of C₈- and C₉-volatiles (e.g. octenals, octenols, and nonenals) or the cyclopentenone derivative 11-oxo prostatrienoic acid (11-OPTA; Stumpe et al., 2010). Whereas the volatiles are formed by at least two bifunctional LOXs with an additional hydroperoxide lyase activity (Wichard et al., 2004; Senger et al., 2005; Anterola et al., 2009) or by a Cyp74-derived hydroperoxide lyase (Stumpe et al., 2006), 11-OPTA is formed in analogy to the octadecanoids by one particular AOC, PpAOC2, via the allene oxide intermediate formed by PpAOS (Bandara et al., 2009). In contrast, PpAOC1 does not accept the 12-HPETE-derived C₂₀-allene oxide and thus converts only the 13-HPOTE-derived allene oxide.Open in a separate windowFigure 2.AOS/AOC pathways in P. patens. 13-HPOTE is converted by PpAOS to 12,13-EOT, which may either hydrolyze in the absence of PpAOC1 or PpAOC1 to ketols and racemic OPDA or, in the presence of PpAOC1 and PpAOC2, cyclize to cis(+)-OPDA. 12-HPETE is converted by PpAOS to 11,12-EET, which again may either hydrolyze in the absence of PpAOC2 to ketols and racemic OPDA or, in the presence of PpAOC2, cyclize to 11-OPTA.In this study, the crystal structures of PpAOC1 and PpAOC2 were solved. Data were also obtained for mutated forms of PpAOC1 and for PpAOC1 and PpAOC2 in complex with the allene oxide stable analog 12,13-EOD. In this way, detailed information about the allene oxide-to-cyclopentenone conversions promoted by the two AOCs was obtained.     

A Wheat SIMILAR TO RCD-ONE Gene Enhances Seedling Growth and Abiotic Stress Resistance by Modulating Redox Homeostasis and Maintaining Genomic Integrity

Plant growth inhibition is a common response to salinity. Under saline conditions, Shanrong No. 3 (SR3), a bread wheat (Triticum aestivum) introgression line, performs better than its parent wheat variety Jinan 177 (JN177) with respect to both seedling growth and abiotic stress tolerance. Furthermore, the endogenous reactive oxygen species (ROS) was also elevated in SR3 relative to JN177. The SR3 allele of sro1, a gene encoding a poly(ADP ribose) polymerase (PARP) domain protein, was identified to be crucial for both aspects of its superior performance. Unlike RADICAL-INDUCED CELL DEATH1 and other Arabidopsis thaliana SIMILAR TO RCD-ONE (SRO) proteins, sro1 has PARP activity. Both the overexpression of Ta-sro1 in wheat and its heterologous expression in Arabidopsis promote the accumulation of ROS, mainly by enhancing the activity of NADPH oxidase and the expression of NAD(P)H dehydrogenase, in conjunction with the suppression of alternative oxidase expression. Moreover, it promotes the activity of ascorbate-GSH cycle enzymes and GSH peroxidase cycle enzymes, which regulate ROS content and cellular redox homeostasis. sro1 is also found to be involved in the maintenance of genomic integrity. We show here that the wheat SRO has PARP activity; such activity could be manipulated to improve the growth of seedlings exposed to salinity stress by modulating redox homeostasis and maintaining genomic stability.     

Ethylene Responses in Rice Roots and Coleoptiles Are Differentially Regulated by a Carotenoid Isomerase-Mediated Abscisic Acid Pathway

Ethylene and abscisic acid (ABA) act synergistically or antagonistically to regulate plant growth and development. ABA is derived from the carotenoid biosynthesis pathway. Here, we analyzed the interplay among ethylene, carotenoid biogenesis, and ABA in rice (Oryza sativa) using the rice ethylene response mutant mhz5, which displays a reduced ethylene response in roots but an enhanced ethylene response in coleoptiles. We found that MHZ5 encodes a carotenoid isomerase and that the mutation in mhz5 blocks carotenoid biosynthesis, reduces ABA accumulation, and promotes ethylene production in etiolated seedlings. ABA can largely rescue the ethylene response of the mhz5 mutant. Ethylene induces MHZ5 expression, the production of neoxanthin, an ABA biosynthesis precursor, and ABA accumulation in roots. MHZ5 overexpression results in enhanced ethylene sensitivity in roots and reduced ethylene sensitivity in coleoptiles. Mutation or overexpression of MHZ5 also alters the expression of ethylene-responsive genes. Genetic studies revealed that the MHZ5-mediated ABA pathway acts downstream of ethylene signaling to inhibit root growth. The MHZ5-mediated ABA pathway likely acts upstream but negatively regulates ethylene signaling to control coleoptile growth. Our study reveals novel interactions among ethylene, carotenogenesis, and ABA and provides insight into improvements in agronomic traits and adaptive growth through the manipulation of these pathways in rice.     

Dimethyl Disulfide Produced by the Naturally Associated Bacterium Bacillus sp B55 Promotes Nicotiana attenuata Growth by Enhancing Sulfur Nutrition

Bacillus sp B55, a bacterium naturally associated with Nicotiana attenuata roots, promotes growth and survival of wild-type and, particularly, ethylene (ET)–insensitive 35S-ethylene response1 (etr1) N. attenuata plants, which heterologously express the mutant Arabidopsis thaliana receptor ETR1-1. We found that the volatile organic compound (VOC) blend emitted by B55 promotes seedling growth, which is dominated by the S-containing compound dimethyl disulfide (DMDS). DMDS was depleted from the headspace during cocultivation with seedlings in bipartite Petri dishes, and ³⁵S was assimilated from the bacterial VOC bouquet and incorporated into plant proteins. In wild-type and 35S-etr1 seedlings grown under different sulfate (SO₄⁻²) supply conditions, exposure to synthetic DMDS led to genotype-dependent plant growth promotion effects. For the wild type, only S-starved seedlings benefited from DMDS exposure. By contrast, growth of 35S-etr1 seedlings, which we demonstrate to have an unregulated S metabolism, increased at all SO₄⁻² supply rates. Exposure to B55 VOCs and DMDS rescued many of the growth phenotypes exhibited by ET-insensitive plants, including the lack of root hairs, poor lateral root growth, and low chlorophyll content. DMDS supplementation significantly reduced the expression of S assimilation genes, as well as Met biosynthesis and recycling. We conclude that DMDS by B55 production is a plant growth promotion mechanism that likely enhances the availability of reduced S, which is particularly beneficial for wild-type plants growing in S-deficient soils and for 35S-etr1 plants due to their impaired S uptake/assimilation/metabolism.     

One Divinyl Reductase Reduces the 8-Vinyl Groups in Various Intermediates of Chlorophyll Biosynthesis in a Given Higher Plant Species,But the Isozyme Differs between Species

Divinyl reductase (DVR) converts 8-vinyl groups on various chlorophyll intermediates to ethyl groups, which is indispensable for chlorophyll biosynthesis. To date, five DVR activities have been detected, but adequate evidence of enzymatic assays using purified or recombinant DVR proteins has not been demonstrated, and it is unclear whether one or multiple enzymes catalyze these activities. In this study, we systematically carried out enzymatic assays using four recombinant DVR proteins and five divinyl substrates and then investigated the in vivo accumulation of various chlorophyll intermediates in rice (Oryza sativa), maize (Zea mays), and cucumber (Cucumis sativus). The results demonstrated that both rice and maize DVR proteins can convert all of the five divinyl substrates to corresponding monovinyl compounds, while both cucumber and Arabidopsis (Arabidopsis thaliana) DVR proteins can convert three of them. Meanwhile, the OsDVR (Os03g22780)-inactivated 824ys mutant of rice exclusively accumulated divinyl chlorophylls in its various organs during different developmental stages. Collectively, we conclude that a single DVR with broad substrate specificity is responsible for reducing the 8-vinyl groups of various chlorophyll intermediates in higher plants, but DVR proteins from different species have diverse and differing substrate preferences, although they are homologous.Chlorophyll (Chl) molecules universally exist in photosynthetic organisms. As the main component of the photosynthetic pigments, Chl molecules perform essential processes of absorbing light and transferring the light energy in the reaction center of the photosystems (Fromme et al., 2003). Based on the number of vinyl side chains, Chls are classified into two groups, 3,8-divinyl (DV)-Chl and 3-monovinyl (MV)-Chl. The DV-Chl molecule contains two vinyl groups at positions 3 and 8 of the tetrapyrrole macrocycle, whereas the MV-Chl molecule contains a vinyl group at position 3 and an ethyl group at position 8 of the macrocycle. Almost all of the oxygenic photosynthetic organisms contain MV-Chls, with the exceptions of some marine picophytoplankton species that contain only DV-Chls as their primary photosynthetic pigments (Chisholm et al., 1992; Goericke and Repeta, 1992; Porra, 1997).The classical single-branched Chl biosynthetic pathway proposed by Granick (1950) and modified by Jones (1963) assumed the rapid reduction of the 8-vinyl group of DV-protochlorophyllide (Pchlide) catalyzed by a putative 8-vinyl reductase. Ellsworth and Aronoff (1969) found evidence for both MV and DV forms of several Chl biosynthetic intermediates between magnesium-protoporphyrin IX monomethyl ester (MPE) and Pchlide in Chlorella spp. mutants. Belanger and Rebeiz (1979, 1980) reported that the Pchlide pool of etiolated higher plants contains both MV- and DV-Pchlide. Afterward, following the further detection of MV- and DV-tetrapyrrole intermediates and their biosynthetic interconversion in tissues and extracts of different plants (Belanger and Rebeiz, 1982; Duggan and Rebeiz, 1982; Tripathy and Rebeiz, 1986, 1988; Parham and Rebeiz, 1992, 1995; Kim and Rebeiz, 1996), a multibranched Chl biosynthetic heterogeneity was proposed (Rebeiz et al., 1983, 1986, 1999; Whyte and Griffiths, 1993; Kolossov and Rebeiz, 2010).Biosynthetic heterogeneity refers to the biosynthesis of a particular metabolite by an organelle, tissue, or organism via multiple biosynthetic routes. Varieties of reports lead to the assumption that Chl biosynthetic heterogeneity originates mainly in parallel DV- and MV-Chl biosynthetic routes. These routes are interconnected by 8-vinyl reductases that convert DV-tetrapyrroles to MV-tetrapyrroles by conversion of the vinyl group at position 8 of ring B to the ethyl group (Parham and Rebeiz, 1995; Rebeiz et al., 2003). DV-MPE could be converted to MV-MPE in crude homogenates from etiolated wheat (Triticum aestivum) seedlings (Ellsworth and Hsing, 1974). Exogenous DV-Pchlide could be partially converted to MV-Pchlide in barley (Hordeum vulgare) plastids (Tripathy and Rebeiz, 1988). 8-Vinyl chlorophyllide (Chlide) a reductases in etioplast membranes isolated from etiolated cucumber (Cucumis sativus) cotyledons and barley and maize (Zea mays) leaves were found to be very active in the conversion of exogenous DV-Chlide a to MV-Chlide a (Parham and Rebeiz, 1992, 1995). Kim and Rebeiz (1996) suggested that Chl biosynthetic heterogeneity in higher plants may originate at the level of DV magnesium-protoporphyrin IX (Mg-Proto) and would be mediated by the activity of a putative 8-vinyl Mg-Proto reductase in barley etiochloroplasts and plastid membranes. However, since these reports did not use purified or recombinant enzyme, it is not clear whether the reductions of the 8-vinyl groups of various Chl intermediates are catalyzed by one enzyme of broad specificity or by multiple enzymes of narrow specificity, which actually has become one of the focus issues in Chl biosynthesis.Nagata et al. (2005) and Nakanishi et al. (2005) independently identified the AT5G18660 gene of Arabidopsis (Arabidopsis thaliana) as an 8-vinyl reductase, namely, divinyl reductase (DVR). Chew and Bryant (2007) identified the DVR BciA (CT1063) gene of the green sulfur bacterium Chlorobium tepidum, which is homologous to AT5G18660. An enzymatic assay using a recombinant Arabidopsis DVR (AtDVR) on five DV substrates revealed that the major substrate of AtDVR is DV-Chlide a, while the other four DV substrates could not be converted to corresponding MV compounds (Nagata et al., 2007). Nevertheless, a recombinant BciA is able to reduce the 8-vinyl group of DV-Pchlide to generate MV-Pchlide (Chew and Bryant, 2007). Recently, we identified the rice (Oryza sativa) DVR encoded by Os03g22780 that has sequence similarity with the Arabidopsis DVR gene AT5G18660. We also confirmed that the recombinant rice DVR (OsDVR) is able to not only convert DV-Chlide a to MV-Chlide a but also to convert DV-Chl a to MV-Chl a (Wang et al., 2010). Thus, it is possible that the reductions of the 8-vinyl groups of various Chl biosynthetic intermediates are catalyzed by one enzyme of broad specificity.In this report, we extended our studies to four DVR proteins and five DV substrates. First, ZmDVR and CsDVR genes were isolated from maize and cucumber genomes, respectively, using a homology-based cloning approach. Second, enzymatic assays were systematically carried out using recombinant OsDVR, ZmDVR, CsDVR, and AtDVR as representative DVR proteins and using DV-Chl a, DV-Chlide a, DV-Pchlide a, DV-MPE, and DV-Mg-Proto as DV substrates. Third, we examined the in vivo accumulations of various Chl intermediates in rice, maize, and cucumber. Finally, we systematically investigated the in vivo accumulations of Chl and its various intermediates in the OsDVR (Os03g22780)-inactivated 824ys mutant of rice (Wang et al., 2010). The results strongly suggested that a single DVR protein with broad substrate specificity is responsible for reducing the 8-vinyl groups of various intermediate molecules of Chl biosynthesis in higher plants, but DVR proteins from different species could have diverse and differing substrate preferences even though they are homologous.     

The Calcium-Dependent Protein Kinase CPK28 Regulates Development by Inducing Growth Phase-Specific,Spatially Restricted Alterations in Jasmonic Acid Levels Independent of Defense Responses in Arabidopsis

Phytohormones play an important role in development and stress adaptations in plants, and several interacting hormonal pathways have been suggested to accomplish fine-tuning of stress responses at the expense of growth. This work describes the role played by the CALCIUM-DEPENDENT PROTEIN KINASE CPK28 in balancing phytohormone-mediated development in Arabidopsis thaliana, specifically during generative growth. cpk28 mutants exhibit growth reduction solely as adult plants, coinciding with altered balance of the phytohormones jasmonic acid (JA) and gibberellic acid (GA). JA-dependent gene expression and the levels of several JA metabolites were elevated in a growth phase-dependent manner in cpk28, and accumulation of JA metabolites was confined locally to the central rosette tissue. No elevated resistance toward herbivores or necrotrophic pathogens was detected for cpk28 plants, either on the whole-plant level or specifically within the tissue displaying elevated JA levels. Abolishment of JA biosynthesis or JA signaling led to a full reversion of the cpk28 growth phenotype, while modification of GA signaling did not. Our data identify CPK28 as a growth phase-dependent key negative regulator of distinct processes: While in seedlings, CPK28 regulates reactive oxygen species-mediated defense signaling; in adult plants, CPK28 confers developmental processes by the tissue-specific balance of JA and GA without affecting JA-mediated defense responses.     

Priming of Wheat with the Green Leaf Volatile Z-3-Hexenyl Acetate Enhances Defense against Fusarium graminearum But Boosts Deoxynivalenol Production

Priming refers to a mechanism whereby plants are sensitized to respond faster and/or more strongly to future pathogen attack. Here, we demonstrate that preexposure to the green leaf volatile Z-3-hexenyl acetate (Z-3-HAC) primed wheat (Triticum aestivum) for enhanced defense against subsequent infection with the hemibiotrophic fungus Fusarium graminearum. Bioassays showed that, after priming with Z-3-HAC, wheat ears accumulated up to 40% fewer necrotic spikelets. Furthermore, leaves of seedlings showed significantly smaller necrotic lesions compared with nonprimed plants, coinciding with strongly reduced fungal growth in planta. Additionally, we found that F. graminearum produced more deoxynivalenol, a mycotoxin, in the primed treatment. Expression analysis of salicylic acid (SA) and jasmonic acid (JA) biosynthesis genes and exogenous methyl salicylate and methyl jasmonate applications showed that plant defense against F. graminearum is sequentially regulated by SA and JA during the early and later stages of infection, respectively. Interestingly, analysis of the effect of Z-3-HAC pretreatment on SA- and JA-responsive gene expression in hormone-treated and pathogen-inoculated seedlings revealed that Z-3-HAC boosts JA-dependent defenses during the necrotrophic infection stage of F. graminearum but suppresses SA-regulated defense during its biotrophic phase. Together, these findings highlight the importance of temporally separated hormone changes in molding plant health and disease and support a scenario whereby the green leaf volatile Z-3-HAC protects wheat against Fusarium head blight by priming for enhanced JA-dependent defenses during the necrotrophic stages of infection.Biogenic volatile organic compounds (BVOCs) are known regulators of communication of sedentary plants with their direct environment (Dudareva et al., 2006). Besides attracting pollinators (Pichersky and Gershenzon, 2002), repelling insect herbivores (Birkett et al., 2010), and exerting direct antimicrobial properties (Friedman et al., 2002), BVOCs can act as an alarm signal to warn neighboring plants of an imminent herbivorous or pathogen attack (Heil and Ton, 2008) or serve as an intraplant signal for the induction of resistance (Karban et al., 2006). Engelberth et al. (2004) found that maize (Zea mays) seedlings emitted the green leaf volatiles (GLVs) Z-3-hexenal, Z-3-hexenol (Z-3-HOL), and Z-3-hexenyl acetate (Z-3-HAC) after they had been infested with caterpillars of Spodoptera exigua. Neighboring uninfested seedlings that had been exposed to these GLVs subsequently showed a considerable higher production of the plant defense hormone jasmonic acid (JA) after treatment with caterpillar regurgitant. This form of induced resistance is called priming. Plants in a primed state display faster and/or stronger activation of defense pathways when challenged by microbial pathogens, herbivorous insects, or abiotic stresses (Conrath, 2009). Exposure to these priming signals does not entail a direct activation of costly defense mechanisms but rather a stronger up-regulation of defense pathways when the plant is actually under attack (van Hulten et al., 2006). Besides resulting in a stronger induction of the JA pathway, priming also has been shown to enhance defense associated with the salicylic acid (SA) pathway, which plays a critical role in plant defense against biotrophic pathogens (Conrath et al., 2006; Jung et al., 2009).The lion’s share of attention on the use of GLVs in induced resistance has been directed to plant-insect interactions. However, the literature regarding priming by GLVs in plant-pathogen interactions remains scarce (Heil, 2014). Few studies have been performed investigating the effect of priming by GLVs on plant-fungus interactions (Scala et al., 2013a, and refs. therein). For example, hexanoic acid, a molecule with a similar structure to GLVs, has been shown to act as a priming agent in tomato (Solanum lycopersicum) plants against an infection by the necrotrophic fungus Botrytis cinerea, leading to a reduced accumulation of reactive oxygen species in primed plants (Vicedo et al., 2009; Kravchuk et al., 2011; Finiti et al., 2014). Since the GLVs E-2-hexenal (E-2-HAL), Z-3-HOL, E-2-hexenol, and Z-3-HAC also have been reported to be emitted by perennial ryegrass (Lolium perenne) after infection with Fusarium poae (Pańka et al., 2013) and by wheat (Triticum aestivum) seedlings after infection with Fusarium graminearum (Piesik et al., 2011), one may speculate that GLVs not only serve as a priming agent against the impending threat of herbivorous insects but rather constitute a general warning and priming mechanism against insects, bacteria, and fungi alike.Fusarium head blight (FHB) is an important disease in cereals caused by a complex of Fusarium spp., of which the hemibiotroph F. graminearum is one of the most prevalent (Parry et al., 1995; Goswami and Kistler, 2004; Audenaert et al., 2009). Besides yield losses of up to 40%, FHB also confers quality losses because of the production of mycotoxins such as deoxynivalenol (DON; Parry et al., 1995; Bottalico and Perrone, 2002; Vanheule et al., 2014).The hemiobiotrophic nature of F. graminearum entails that its lifestyle is characterized by a biotrophic phase followed by a necrotrophic phase. During the biotrophic phase, spores will germinate and hyphae will grow extracellularly and intercellularly. To counteract fungal colonization during the biotrophic phase, the host plant will accumulate hydrogen peroxide (H₂O₂) to induce programmed cell death. However, H₂O₂ acts as a signal for F. graminearum to produce DON, which in turn creates a positive feedback loop leading to increased H₂O₂ and DON production, clearing the way for F. graminearum to further colonize the host plant (Desmond et al., 2008). Plant defense against the biotrophic and necrotrophic phases generally has been linked to SA- and JA-related pathways, respectively (Glazebrook, 2005). This was also found in the study by Ding et al. (2011). They reported higher endogenous SA concentrations during the first hours of infection, followed by a rise in JA concentrations later on. However, plant defense against pathogens is regulated by a whole array of plant hormones, between which an intricate cross talk exists (Pieterse et al., 2012). One of the best-studied antagonistic signaling pathways is between SA and JA (Thaler et al., 2002; Pieterse et al., 2012). Research investigating the hormonal modulation of plant immunity has been done primarily in dicots. The negative relationship between SA and JA also seems to be conserved in rice (Oryza sativa), another monocot (De Vleesschauwer et al., 2013). Because of the presence of this possible antagonistic signaling and the hemibiotrophic lifestyle of F. graminearum, it is important to look more closely to the effect of priming on these two defense pathways in wheat.Here, we show that preexposure of wheat to the GLV Z-3-HAC primes wheat plants for an enhanced defense against a future infection with F. graminearum. Furthermore, our results indicate that pretreatment with Z-3-HAC leads to a stronger activation of JA-related defense while exerting suppressive effects on SA-responsive gene expression. Lastly, we found evidence that enhanced plant defense led to increased DON production by F. graminearum.     

Arabidopsis sphingolipid fatty acid 2-hydroxylases (AtFAH1 and AtFAH2) are functionally differentiated in fatty acid 2-hydroxylation and stress responses

2-Hydroxy fatty acids (2-HFAs) are predominantly present in sphingolipids and have important physicochemical and physiological functions in eukaryotic cells. Recent studies from our group demonstrated that sphingolipid fatty acid 2-hydroxylase (FAH) is required for the function of Arabidopsis (Arabidopsis thaliana) Bax inhibitor-1 (AtBI-1), which is an endoplasmic reticulum membrane-localized cell death suppressor. However, little is known about the function of two Arabidopsis FAH homologs (AtFAH1 and AtFAH2), and it remains unclear whether 2-HFAs participate in cell death regulation. In this study, we found that both AtFAH1 and AtFAH2 had FAH activity, and the interaction with Arabidopsis cytochrome b₅ was needed for the sufficient activity. 2-HFA analysis of AtFAH1 knockdown lines and atfah2 mutant showed that AtFAH1 mainly 2-hydroxylated very-long-chain fatty acid (VLCFA), whereas AtFAH2 selectively 2-hydroxylated palmitic acid in Arabidopsis. In addition, 2-HFAs were related to resistance to oxidative stress, and AtFAH1 or 2-hydroxy VLCFA showed particularly strong responses to oxidative stress. Furthermore, AtFAH1 interacted with AtBI-1 via cytochrome b₅ more preferentially than AtFAH2. Our results suggest that AtFAH1 and AtFAH2 are functionally different FAHs, and that AtFAH1 or 2-hydroxy VLCFA is a key factor in AtBI-1-mediated cell death suppression.Sphingolipids are a large class of lipids present ubiquitously in eukaryotic cells and involved in various cellular processes such as signal transduction, protein transport, and programmed cell death as structural components of the plasma membrane and tonoplast and as signaling molecules (Dunn et al., 2004; Pata et al., 2010). These numerous functions are based on the structural diversity of sphingolipids. Complex sphingolipids are largely formed by a variety of head groups and a ceramide, which is comprised of a long-chain base amide linked to a fatty acid. One of the main characteristics of sphingolipid fatty acids is that large number of sphingolipids contained very-long-chain fatty acids (VLCFAs; fatty acids with ≥ C20; Raffaele et al., 2009). Another feature is the 2-hydroxylation of fatty acids (Alderson et al., 2005). The 2-hydroxy fatty acid (2-HFA)-containing sphingolipids are present in most organisms, including yeast (Saccharomyces cerevisiae), vertebrates, and plants. Especially in higher plants, 2-HFAs are contained in more than 90% complex sphingolipids such as glucosylceramides and glycosylinositolphosphorylceramides (Imai et al., 1995; Pata et al., 2010).The 2-hydroxylation of sphingolipid N-acyl chains is catalyzed in yeast and mammals by the enzyme sphingolipid fatty acid 2-hydroxylase (ScFAH1 and FA2H, respectively, and we refer to them as FAH in this report; Mitchell and Martin, 1997; Alderson et al., 2004; Hama, 2010). FAH is an endoplasmic reticulum (ER)-localized membrane protein composed of two domains: an N-terminal cytochrome b₅ (Cb5)-like domain and a putative catalytic site with the His motif (HXXHH), which coordinates the nonheme diiron cluster at the active site of the enzyme and is highly conserved among membrane-bound desaturases and hydroxylases. Mammalian FA2H is reported to catalyze the 2-hydroxylation of free fatty acid in vitro, which was dependent on a reconstituted electron transport system (Alderson et al., 2005). In mammals, FA2H-synthesized 2-HFAs abundantly accumulate in epidermal keratinocytes and the myelin-forming cells of the nervous system (Alderson et al., 2006; Uchida et al., 2007; Maldonado et al., 2008). Loss of FA2H in mouse altered the composition and physicochemical properties of sebum, causing alopecia (Maier et al., 2011). In addition, FA2H deficiency also causes a wide range of neurodegeneration phenotypes such as spastic paraplegia, leukodystrophy, and brain ion deposition (Schneider and Bhatia, 2010). Moreover, FA2H is a negative regulator of the cell cycle and facilitates dibutyryl-cyclic AMP-induced cell cycle exit in D6P2T schwannoma cells (Alderson and Hama, 2009). These studies suggest that 2-hydroxylation of fatty acids is important in various cellular functions in mammals. However, there had been few reports about plant FAHs in the past.Recently, we suggested that FAH could mediate the function of Bax inhibitor-1 (BI-1), which is an ER membrane-localized cell death suppressor widely conserved in animals and plants (Xu and Reed, 1998; Kawai-Yamada et al., 2001; Nagano et al., 2009). Arabidopsis (Arabidopsis thaliana) BI-1 (AtBI-1) plays important roles in the resistance to various biotic and abiotic stresses including pathogens, ER stress, ion stress, and oxidative stress generating reactive oxygen species (ROS; Kawai-Yamada et al., 2001, 2004, 2009; Watanabe and Lam, 2006, 2008; Ihara-Ohori et al., 2007; Ishikawa et al., 2010). Our recent work indicated that AtBI-1 interacted with ScFAH1, and that deletion of ScFAH1 prevented AtBI-1 from suppression of cell death induced by mammalian proapoptotic protein, Bax, in yeast cells (Nagano et al., 2009). In Arabidopsis, there are two highly identical FAH homologs, AtFAH1 and AtFAH2, which possess several His motifs like their yeast and mammalian counterparts. However, AtFAH1 and AtFAH2 lack a Cb5-like domain, which provides electrons to ScFAH1 and FA2H (Mitchell and Martin, 1997; Alderson et al., 2004; Nagano et al., 2009). Instead, we demonstrated the interaction between both AtFAHs and Arabidopsis Cb5s (AtCb5s), which are localized in the ER membrane or mitochondrial outer membrane, by using a split-ubiquitin yeast two-hybrid system. In addition, AtBI-1 also interacted with AtCb5s. Moreover, overexpression of AtBI-1 increased the amounts of 2-hydroxy VLCFAs. These results allowed us to speculate that AtBI-1 interacts with AtFAHs via AtCb5 to activate the synthesis of 2-hydroxy VLCFA in Arabidopsis, which leads to the suppression of cell death. However, it remains unclear whether 2-hydroxy VLCFA is related to the regulation of cell death or stress responses. Furthermore, little is known about the function of AtFAH1 and AtFAH2 in 2-HFA synthesis of plant cells.The results of this study confirmed that both AtFAHs are FAHs, and identified functional differences between AtFAH1 and AtFAH2 in fatty acid 2-hydroxylation in Arabidopsis. In addition, AtFAH1 modified the resistance to oxidative stress more strongly than AtFAH2, which was consistent with the preferential interaction with AtBI-1.     

Natural Variation in Small Molecule–Induced TIR-NB-LRR Signaling Induces Root Growth Arrest via EDS1- and PAD4-Complexed R Protein VICTR in Arabidopsis

In a chemical genetics screen we identified the small-molecule [5-(3,4-dichlorophenyl)furan-2-yl]-piperidine-1-ylmethanethione (DFPM) that triggers rapid inhibition of early abscisic acid signal transduction via PHYTOALEXIN DEFICIENT4 (PAD4)- and ENHANCED DISEASE SUSCEPTIBILITY1 (EDS1)-dependent immune signaling mechanisms. However, mechanisms upstream of EDS1 and PAD4 in DFPM-mediated signaling remain unknown. Here, we report that DFPM generates an Arabidopsis thaliana accession-specific root growth arrest in Columbia-0 (Col-0) plants. The genetic locus responsible for this natural variant, VICTR (VARIATION IN COMPOUND TRIGGERED ROOT growth response), encodes a TIR-NB-LRR (for Toll-Interleukin1 Receptor–nucleotide binding–Leucine-rich repeat) protein. Analyses of T-DNA insertion victr alleles showed that VICTR is necessary for DFPM-induced root growth arrest and inhibition of abscisic acid–induced stomatal closing. Transgenic expression of the Col-0 VICTR allele in DFPM-insensitive Arabidopsis accessions recapitulated the DFPM-induced root growth arrest. EDS1 and PAD4, both central regulators of basal resistance and effector-triggered immunity, as well as HSP90 chaperones and their cochaperones RAR1 and SGT1B, are required for the DFPM-induced root growth arrest. Salicylic acid and jasmonic acid signaling pathway components are dispensable. We further demonstrate that VICTR associates with EDS1 and PAD4 in a nuclear protein complex. These findings show a previously unexplored association between a TIR-NB-LRR protein and PAD4 and identify functions of plant immune signaling components in the regulation of root meristematic zone-targeted growth arrest.