内蒙古高原小叶锦鸡儿与中间锦鸡儿遗传多样性的研究

利用ISSR分子标记,选取内蒙古高原自东向西共15个锦鸡儿种群(7个小叶锦鸡儿种群,8个中间锦鸡儿种群)进行遗传多样性分析。结果表明:(1)7个小叶锦鸡儿种群总的多态位点百分数为98.19%,Nei’s基因多样性指数与Shannon信息指数分别为0.289 7、0.444 0;居群间遗传分化系数Gst为0.119 0,表明小叶锦鸡儿种群存在中等程度的遗传分化;居群间基因交流频繁,基因流(Nm)为3.701 0。(2)8个中间锦鸡儿种群多态位点百分数为99.7%,Nei’s基因多样性指数为0.312 8,Shannon信息指数为0.478 4;居群间遗传分化系数(Gst)为0.188 1,表明中间锦鸡儿种群存在较大的遗传分化,基因流(Nm)为2.157 8。(3)中间锦鸡儿遗传多样性及遗传分化均高于小叶锦鸡儿,这是中间锦鸡儿替代小叶锦鸡儿适应不良环境扩展分布的遗传基础。(4)邻接聚类分析结果显示,15个锦鸡儿种群表现为从东到西逐渐聚类,体现了这2个种在分布上的地理渐变性及地理替代性;遗传多样性各指数与气象因子及土壤因子之间的相关性分析表明,平均气温对锦鸡儿种群的遗传分化起着重要的作用。     

内蒙古高原小叶锦鸡儿(Caragana microphylla)、中间锦鸡儿(C. davazamcii)和柠条锦鸡儿(C. korshinskii)的遗传多样性及遗传关系

采用RAPD技术对10个具较大地理跨度的小叶锦鸡儿、中间锦鸡儿和柠条锦鸡儿种群的遗传多样性和遗传关系进行了研究.共检测到678个位点,多态条带比率(PPB)为100%;特有位点41个,占6.05%.总体上3种锦鸡儿的遗传多样性表现出自东向西递减的趋势,分析表明其与生长地点年均气温呈显著负相关.AMOVA表明:3种锦鸡儿种间变异只占总体变异的6.08%,且显著性检验表明这种变异不显著;种内种群间的变异占总变异的11.90%;总变异的主要部分来自种群内部(82.02%). 3种锦鸡儿各种群总体分析结果表明:种群内变异比率Hpop/Hsp为0.8013,基因分化系数Gst为0.1603,种群每代迁移数Nm为2.6192,显示种群间存在一定强度的基因流,3种锦鸡儿间表现为异交性.3种锦鸡儿多样性高低及种群聚类分布格局都表现出一定的地理连续性.     

内蒙古草原小叶锦鸡儿遗传分化的研究

采用RAPD技术对内蒙古草原5个具较大地理跨度的小叶锦鸡儿(Caragana microphylla)地理群的遗传多样性和遗传结构特点进行了研究。共检测到466个位点,多态位点463个,多态位点百分率(PPB)为99.36%;特有位点37个,占7.94%。Nei指数和Shannon指数都表明阿巴嘎旗小叶锦鸡儿地理群遗传多样性最高,其它地理群的遗传多样性有向东、向西降低的趋势。AMOVA得到的固定系数φst为0.055 26;基因分化系数Gst为0.067 3,用Shannon指数估算的地理群间变异比率(Hsp-Hpop)/Hsp为0.147 9,说明遗传变异主要存在于各地理群内部。地理群每代迁移数Nm为6.930 5,显示地理群间存在较强的基因流。Mantel检验表明5个小叶锦鸡儿地理群间遗传距离与地理距离有显著相关性。     

鄂尔多斯高原不同降雨量梯度中间锦鸡儿（Caragana davazamcii Sancz）种群的遗传结构

为了阐明环境条件对中间锦鸡儿适应状况的影响，在鄂尔多斯高原从东向西按照降雨逐渐减少的梯度选取了5个生境，从遗传多样性的角度出发，应用简单重复间序列（ISSR）方法，对各生境的中间锦鸡儿种群进行了分子生态学研究，结果表明随着生境由东向西的变化，多年平均降雨量的减少，中间锦鸡儿种群遗传多样性有所增加，大部分变异发生在种群内（79.95%），属异交类型，中间锦鸡儿群体间遗传距离缓慢增加，遗传一致度降低，说明生境条件的变化特别是长期形成的水分条件对中间锦鸡儿的遗传多样性有一定的影响。     

鄂尔多斯高原不同降雨量梯度中间锦鸡儿(Caragana davazamcii Sancz)种群的遗传结构

为了阐明环境条件对中间锦鸡儿适应状况的影响,在鄂尔多斯高原从东向西按照降雨逐渐减少的梯度选取了5个生境,从遗传多样性的角度出发,应用简单重复间序列（ISSR）方法,对各生境的中间锦鸡儿种群进行了分子生态学研究．结果表明随着生境由东向西的变化,多年平均降雨量的减少,中间锦鸡儿种群遗传多样性有所增加,大部分变异发生在种群内（79．95％）,属异交类型,中间锦鸡儿群体间遗传距离缓慢增加,遗传一致度降低,说明生境条件的变化特别是长期形成的水分条件对中间锦鸡儿的遗传多样性有一定的影响。     

鄂尔多斯高原不同降雨量地区中间锦鸡儿(Caragana davazamcii Sancz)种群的ISSR遗传分析

采用简单重复间序列（ISSR）方法,对鄂尔多斯高原从东向西降雨量逐渐减少选5个地区的中间锦鸡儿种群进行分子生态学研究的结果表明,随着这一地区多年平均降雨量由东向西的逐渐减少,中间锦鸡儿种群遗传多样性有所增加,大部分变异发生在种群内（79.95％）,属异交类型,中间锦鸡儿群体间遗传距离缓慢增加,遗传一致度降低。这种随着水分递减呈现生态梯度变异的现象,说明水分变化特别是长期形成的水分条件对中间锦鸡儿的遗传多样性可能有一定的影响。     

内蒙古中部地区小叶锦鸡儿天然居群表型多样性分析

对采自内蒙古中部地区的7个小叶锦鸡儿(Caragana microphylla Lam.)天然居群的207份材料进行了表型多样性分析.结果表明:小叶锦鸡儿种内表型性状存在丰富的变异,无论在居群间还是在居群内均表现出极显著差异(P<0.001);叶片、荚果、种子等11个表型性状居群间分化系数为16.90%,居群内表型性状分化系数为83.10%,是小叶锦鸡儿表型变异的主要来源;主成分分析显示荚果柄长、荚果长、关节长是造成小叶锦鸡儿表型变异的主要影响因子;依据小叶锦鸡儿表型性状,通过聚类分析将7个小叶锦鸡儿居群分为3类,第1类为多伦居群,第2类为西乌旗居群,第3类为四子王旗、察右后旗、化德、镶黄旗和正镶白旗5个居群.     

同质园环境和遗传分化影响锦鸡儿属植物根际土壤固氮菌多样性和群落结构

环境和遗传分化共同影响植物的功能性状,进而能够通过根系分泌物影响根际微生物。本研究利用同质园试验,通过高通量测序技术,基于固氮酶基因nifH的同源性,分析同质园栽培的不同种源小叶锦鸡儿(Caraganamicrophylla)、中间锦鸡儿(C. liouana)和荒漠锦鸡儿(C.roborovskyi)根际土壤固氮菌多样性,并探究其与种源地气候及同质园土壤属性的关系。结果表明, 3种锦鸡儿植物根际土壤固氮菌隶属6门9纲18目21科33属72种,其中变形菌门、疣微菌门和蓝细菌门为优势门,优势属为中慢生根瘤菌属(Mesorhizobium)、固氮氢自养单胞菌属(Azohydromonas)和慢生根瘤菌属(Bradyrhizobium)。3种锦鸡儿根际土壤固氮菌α多样性种间差异不显著,但中间锦鸡儿和荒漠锦鸡儿根际土壤固氮菌的α多样性存在显著的种内差异(P<0.05),小叶锦鸡儿和荒漠锦鸡儿根际土壤固氮菌群落结构存在显著的种内差异(P<0.05)。冗余分析表明同质园土壤p H和种源地年均温分别是影响3种锦鸡儿根际土壤固氮菌多样性和群落结构变化的主要因子,说明3种锦鸡儿属植物根际土壤...     

基于ITS序列和trnL-F序列探讨小叶锦鸡儿、中间锦鸡儿和柠条锦鸡儿的种间关系

中间锦鸡儿Caragana davazamcii Sancz.的分类处理一直存在争议, 它与小叶锦鸡儿C. microphylla Lam.和柠条锦鸡儿C. korshinskii Kom.的关系尚不清楚。该种被处理为一个独立的种或后两个种的变种。本文利用ITS序列和叶绿体trnL-F序列, 综合形态和地理分布, 探讨了中间锦鸡儿的起源及与另外两个种的种间关系。结果显示, 中间锦鸡儿的trnL-F序列与小叶锦鸡儿完全一致, 而与柠条锦鸡儿有明显差异。中间锦鸡儿的ITS序列高度纯合, 不支持该种可能是杂交起源的假设。相反, 另外两个种的ITS序列均出现多个位点杂合, 克隆后均得到2种不同的序列。中间锦鸡儿的ITS序列与小叶锦鸡儿2种序列中的1种完全一致。该结果表明, 中间锦鸡儿可能作为亲本之一参与了小叶锦鸡儿的杂交起源, 或者基因流是造成这两个种形态相似的主要原因。中间锦鸡儿与柠条锦鸡儿形态上的相似可能是趋同进化的表现。     

毛乌素沙地中间锦鸡儿根瘤菌的多样性及其抗逆性

从内蒙古毛乌素沙地优势物种中间锦鸡儿收集根瘤,分离根瘤菌15株,对其进行同工酶电泳,聚类分析证明中间锦鸡儿的遗传多样性.对其耐盐性、耐酸碱性、生长温度范围、产酸产碱性、过氧化氢酶活性以及唯一碳源利用能力进行比较研究,结果表明,所有中间锦鸡儿根瘤菌均分泌H⁺,都具有过氧化氢酶活性,73.3%的菌株可以在含3%NaCl的YMA培养基上生长,80%的菌株可以抵抗50℃高温,除对乳糖和淀粉利用表现出差异外,中间锦鸡儿根瘤菌对其余碳源没有选择性,证明中间锦鸡儿根瘤菌具有较强的抗逆性,但仍存在菌株间差异,是对毛乌素沙地多种景观生态类型的适应.作为一种新的种质资源,中间锦鸡儿根瘤菌可用于恶劣生境固氮.     

Genetic variation of the genus Kengyilia by ISSR markers

We investigated the genetic variation within 32 accessions distributed to 14 species and one variety by using ISSR (inter-simple sequence repeat) markers.The results showed that genetic variation was relatively higher among the accessions.A total of 593 bands were amplified by 12 ISSR primers,of which 535 bands (90.2%) were polymorphic.Eleven to 80 polymorphie bands were amplified from each prime,with an average of 44.6 bands.The interspecies GS (genetic similarity)value ranged from 0.430 to 0.866,and the average was 0.620.Cluster analysis showed that all accessions could be classified into 4 groups by ISSR markers.The different accessions in a species were clustered together,but they had genetic variation in molecular levels.There was obvious interspecies genetic variation.Species with similar morphological characteristics and from the same areas or neighboring geographical regions were clustered together and had close relationships.ISSR markers are useful in analyzing interspecies variation in Kengyilia.     

送春与多花兰种间杂交后代的ISSR分析

该文使用简单重复序列间( ISSR)分子标记,对送春与多花兰种间杂交后代进行了研究。结果表明：从80个ISSR引物中筛选出14个扩增效果稳定的ISSR引物,对两亲本和59个F1代个体进行了ISSR扩增,得到107个扩增位点,扩增的片段大小位于90~2100 bp之间,平均每个引物扩增7.64条条带,得到11种类型的带。 ISSR标记在送春×多花兰的F1代中表现出一定的多态性,分离频率为44.86％,分离位点有83.33％符合孟德尔1︰1或3︰1的分离规律,产生偏孟德尔分离的位点占12.50％,余下的4.17％属于特殊分离带型。可能导致后代变异的位点为偏孟德尔分离的6条带、缺失的8条带或新生成的2条带。聚类图中父本和母本与F1代个体间的遗传距离较远,59个杂交后代先聚集成一组,再同母本相聚为一组,最后才同父本聚在一起,59个杂种均偏母本型。送春与多花兰的杂交后代在植株形态、染色体、遗传物质方面都具备双亲特点,61个个体间的ISSR分子量标记结果和植株形态学特征都说明,59个F1代杂种包含送春和多花兰的遗传特性是真杂种;F1代杂种既有双亲的互补特征带,又有双亲的重组片断即产生新的特异带,这说明送春与多花兰的杂交后代具有遗传变异的特点。该研究结果可以有效地对杂交后代进行定向选择,为兰花的杂交育种提供了分子依据。     

Genetic variation of the genus Kengyilia by ISSR markers

We investigated the genetic variation within 32 accessions distributed to 14 species and one variety by using ISSR (inter-simple sequence repeat) markers. The results showed that genetic variation was relatively higher among the accessions. A total of 593 bands were amplified by 12 ISSR primers, of which 535 bands (90.2%) were polymorphic. Eleven to 80 polymorphic bands were amplified from each prime, with an average of 44.6 bands. The interspecies GS (genetic similarity) value ranged from 0.430 to 0.866, and the average was 0.620. Cluster analysis showed that all accessions could be classified into 4 groups by ISSR markers. The different accessions in a species were clustered together, but they had genetic variation in molecular levels. There was obvious interspecies genetic variation. Species with similar morphological characteristics and from the same areas or neighboring geographical regions were clustered together and had close relationships. ISSR markers are useful in analyzing interspecies variation in Kengyilia. __________ Translated from Guihaia, 2006, 26 (4): 375–380 [译自: 广西植物]     

应用ISSR标记研究仲彬草属植物的遗传变异

利用ISSR标记对仲彬草属14个种和1个变种共32份材料进行了研究。结果表明:仲彬草属材料间ISSR标记多态性较高,变异较大。12个引物共扩增出593条带,其中535条(90.2%)具有多态性,每个引物可扩增出11~80条多态性带,平均44.6条。ISSR标记遗传相似系数在种间变化范围为0.430~0.866,平均值为0.620。从聚类分析得知,ISSR标记能将32份仲彬草属材料完全分开,32份材料聚为4类。同种不同居群的材料分别聚在一起,亲缘关系较近,同时,在分子水平上种内不同居群间也存在分化;种间存在明显的遗传差异;形态相似、地理分布一致的物种倾向于聚类在一起,有一定的亲缘关系。因此,ISSR分子标记能有效地评价仲彬草属物种的亲缘关系。     

用ISSR标记检测黄麻野生种与栽培种遗传多样性

利用ISSR标记对黄麻属((Corchorus)10个种27份材料的遗传多样性进行分析,25个ISSR引物共扩增出283条带,平均每个引物扩增出10．48条带,多态性条带比例(PPB)为92．85％;种间遗传相似系数在0．33～0．97之间。表现出丰富的遗传多样性．系统聚类结果显示,第I、Ⅲ类群均为黄麻属8个种11份原始野生种,种间存在丰富的遗传多样性;第Ⅱ类群为黄麻两个栽培种及其近缘野生种,共16份材料。种遗传相似性较高;基因组聚类结果与经典分类相符．利用分子标记技术研究初步可以认为。荨麻叶种为最原始的黄麻野生种之一;三室种21C为三室种的一个变种;甜麻为一个尚待定性的野生种．同组材料的RAPD和ISSR分析结果,具有较高的相似性和可信度．     

Patterns of Genetic Variation in Swertia przewalskii, an Endangered Endemic Species of the Qinghai-Tibet Plateau

Swertia przewalskii Pissjauk. (Gentianaceae) is a critically endangered and endemic plant of the Qinghai-Tibet Plateau in China. RAPD and ISSR analyses were carried out on a total of 63 individuals to assess the extent of genetic variation in the remaining three populations. Percentage of polymorphic bands was 94% (156 bands) for RAPD and 96% (222 bands) for ISSR. A pairwise distance measure calculated from the RAPD and ISSR data was used as input for analysis of molecular variance (AMOVA). AMOVA indicated that a high proportion of the total genetic variation (52% for RAPD and 56% for ISSR) was found among populations; pairwise Φ _ST comparisons showed that the three populations examined were significantly different (p < 0.001). Significant genetic differentiation was found based on different measures (AMOVA and Hickory θ_B) in S. przewalskii (0.52 on RAPD and 0.56 on ISSR; 0.46 on RAPD and 0.45 on ISSR). The differentiation of the populations corresponded to low average gene flow (0.28 based on RAPD and 0.31 based on ISSR), whereas genetic distance-based clustering and coalescent-based assignment analyses revealed significant genetic isolation among populations. Our results indicate that genetic diversity is independent of population size. We conclude that although sexual reproduction and gene flow between populations of S. przewalskii are very limited, they have preserved high levels of genetic diversity. The main factors responsible for the high level of difference among populations are the isolation and recent fragmentation under human disturbance.     

菘蓝二倍体及其同源四倍体遗传差异的ISSR分析

以1个菘蓝二倍体及其10个同源四倍体株系为材料,利用19个随机扩增ISSR引物分析其遗传差异性,为菘蓝多倍体诱变的基因表达调控以及遗传改良提供依据。结果显示:菘蓝二倍体与其同源四倍体及四倍体之间的ISSR多态性有明显差异,除主要遗传位点相同外,有些四倍体株系扩增条带数多于二倍体,有些四倍体株系扩增条带数少于二倍体,四倍体株系间亦有多态位点;11个株系共扩增111条多态性条带,多态性达55.22%。聚类分析显示,不同四倍体株系与二倍体的遗传差异大小亦不同。研究表明,菘蓝二倍体与其同源四倍体具有中等偏高的遗传差异性。     

Assessment of genetic instabilities induced by tissue culture in alkaligrass

Alkaligrass (Puccinellia chinampoensis Ohwi), one of the important forage grasses in saline-alkalieroded grasslands, has been proved to be invaluable for improving saline-alkali soils. However, little is known of its genetic instabilities during in vitro culture for its artificial breeding. In this paper, a simple and efficient regeneration system of mature seed-induced calli in alkaligrass was established, and the somaclonal variation in the regenerated plants was assessed by inter-simple sequence repeat (ISSR) and retrotransposon-microsatellite amplified polymorphism (REMAP) markers. 18 randomly chosen regenerants were subjected to ISSR and REMAP analysis with the shoot from the same grain of seed as the control. ISSR analysis showed that of the 145 scored bands, 13 were polymorphic among the analyzed samples, giving rise to a genetic variation frequency of 8.97%. REMAP analysis revealed that 4 out of 127 scored bands were polymorphic, a genetic variation frequency of 3.15% occurred. Cluster analysis indicated that the genetic similarity index calculated on the basis of ISSR data or REMAP data among the 18 regenerated plants and the donor plant was 0.974 and 0.996 respectively. All the results confirmed that somaclonal variation was induced by tissue culture in alkaligrass at a higher frequency, and indicated that the regeneration system could be a viable option for genetic improvement of alkaligrass by biotechniques.     

新疆地区番茄潜叶蛾遗传多样性的ISSR分析

[目的]番茄潜叶蛾已成为世界性番茄的重要害虫,对番茄产业的发展造成了严重的威胁,研究其遗传多样性有利于揭示不同地理种群的遗传变异结构。[方法]采用ISSR分子标记技术分析了20个地理种群番茄潜叶蛾的遗传多样性和遗传结构特征。[结果]15条引物扩增出137条ISSR条带,其中多态性条带占96.35%,所有个体显示了各自独特的ISSR图谱。ISSR的标记遗传多样性结果表明,20个番茄潜叶蛾地理种群遗传距离大小范围为0.0065~0.1623,遗传一致度范围为0.8502~0.9935。种群变异来源分析表明,25.36%的遗传变异来自种群间,74.64%的变异来源于种群内部。UPGMA系统发育分析结果表明,各地理种群的聚类与地理位置无较强的关联性。[结论]番茄潜叶蛾尚处在入侵早期阶段,且具备频繁入侵和多点的特征。防控上要注意加强检疫,阻绝多点入侵来源。     

Genetic variation within and among populations of a wild rice Oryza granulata from China detected by RAPD and ISSR markers

Genetic variation within and between five populations of Oryza granulata from two regions of China was investigated using RAPD (random amplified polymorphic DNA) and ISSR (inter-simple sequence repeat amplification) markers. Twenty RAPD primers used in this study amplified 199 reproducible bands with 61 (30.65%) polymorphic; and 12 ISSR primers amplified 113 bands with 52 (46.02%) polymorphic. Both RAPD and ISSR analyses revealed a low level of genetic diversity in wild populations of O. granulata. Furthermore, analysis of molecular variance (AMOVA) was used to apportion the variation within and between populations both within and between regions. As the RAPD markers revealed, 73.85% of the total genetic diversity resided between the two regions, whereas only 19.45% and 6.70% were present between populations within regions and within a population respectively. Similarly, it was shown by ISSR markers that a great amount of variation (49.26%) occurred between the two regions, with only 38.07% and 12.66% between populations within regions and within a population respectively. Both the results of a UPGMA cluster, based on Jaccard coefficients, and pairwise distance analysis agree with that of the AMOVA partition. This is the first report of the partitioning of genetic variability within and among populations of O. granulata at the DNA level, which is in general agreement with a recent study on the same species in China using allozyme analysis. Our results also indicated that the percentage of polymorphic bands (PPB) detected by ISSR is higher than that detected by RAPD. It seems that ISSR is superior to RAPD in terms of the polymorphism detected and the amplification reproducibility. Received: 29 March 2000 / Accepted: 15 May 2000