Isotopic biosignatures in carbonate‐rich,cyanobacteria‐dominated microbial mats of the Cariboo Plateau,B.C.

Photosynthetic activity in carbonate‐rich benthic microbial mats located in saline, alkaline lakes on the Cariboo Plateau, B.C. resulted in pCO₂ below equilibrium and δ¹³C_DIC values up to +6.0‰ above predicted carbon dioxide (CO₂) equilibrium values, representing a biosignature of photosynthesis. Mat‐associated δ¹³C_carb values ranged from ~4 to 8‰ within any individual lake, with observations of both enrichments (up to 3.8‰) and depletions (up to 11.6‰) relative to the concurrent dissolved inorganic carbon (DIC). Seasonal and annual variations in δ¹³C values reflected the balance between photosynthetic ¹³C‐enrichment and heterotrophic inputs of ¹³C‐depleted DIC. Mat microelectrode profiles identified oxic zones where δ¹³C_carb was within 0.2‰ of surface DIC overlying anoxic zones associated with sulphate reduction where δ¹³C_carb was depleted by up to 5‰ relative to surface DIC reflecting inputs of ¹³C‐depleted DIC. δ¹³C values of sulphate reducing bacteria biomarker phospholipid fatty acids (PLFA) were depleted relative to the bulk organic matter by ~4‰, consistent with heterotrophic synthesis, while the majority of PLFA had larger offsets consistent with autotrophy. Mean δ¹³C_org values ranged from ?18.7 ± 0.1 to ?25.3 ± 1.0‰ with mean Δ¹³C_inorg‐org values ranging from 21.1 to 24.2‰, consistent with non‐CO₂‐limited photosynthesis, suggesting that Precambrian δ¹³C_org values of ~?26‰ do not necessitate higher atmospheric CO₂ concentrations. Rather, it is likely that the high DIC and carbonate content of these systems provide a non‐limiting carbon source allowing for expression of large photosynthetic offsets, in contrast to the smaller offsets observed in saline, organic‐rich and hot spring microbial mats.     

Estimating stable carbon isotope values of microphytobenthos in the Arctic for application to food web studies

Most studies on Arctic food webs have neglected microphytobenthos as a potential food source because we currently lack robust measurements of δ¹³C values for microphytobenthos from this environment. As a result, the role of microphytobenthos in high latitude marine food webs is not well understood. We combined field measurements of the concentration of aqueous carbon dioxide and the stable carbon isotopic composition of dissolved inorganic carbon (δ¹³C_DIC) from bottom water in the Beaufort and Chukchi seas with a set of stable carbon isotopic fractionation factors reflecting differences in algal taxonomy and physiology to estimate the stable carbon isotope composition of microphytobenthos-derived total organic carbon (δ¹³C_p). The δ¹³C_p for Phaeodactylum tricornutum, a pennate diatom likely to be a dominant microphytobenthos taxon, was estimated to be ?23.9 ± 0.4 ‰ as compared to a centric diatom (Porosira glacialis, δ¹³C_p = ?20.0 ± 1.6 ‰) and a marine haptophyte (Emiliana huxleyi, δ¹³C_p = ?22.7 ± 0.5 ‰) at a growth rate (µ) of 0.1 divisions per day (d^?1). δ¹³C_p values increased by ~2.5 ‰ when µ increased from 0.1 to a maximum growth rate of 1.4 d^?1. We compared our estimates of δ¹³C_p values for microphytobenthos with published measurements for other carbon sources in the Arctic and sub-Arctic. We found that microphytobenthos values overlapped with pelagic sources, yet differed from riverine and ice-derived carbon sources. These model results provide valuable insight into the range of possible isotopic values for microphytobenthos from this region, but we remain cautious in regard to the conclusiveness of these findings given the paucity of field measurements currently available for model validation.     

Bacterial abundance and composition in marine sediments beneath the Ross Ice Shelf,Antarctica

Marine sediments of the Ross Sea, Antarctica, harbor microbial communities that play a significant role in the decomposition, mineralization, and recycling of organic carbon (OC). In this study, the cell densities within a 153‐cm sediment core from the Ross Sea were estimated based on microbial phospholipid fatty acid (PLFA) concentrations and acridine orange direct cell counts. The resulting densities were as high as 1.7 × 10⁷ cells mL^?1 in the top ten centimeters of sediments. These densities are lower than those calculated for most near‐shore sites but consistent with deep‐sea locations with comparable sedimentation rates. The δ¹³C measurements of PLFAs and sedimentary and dissolved carbon sources, in combination with ribosomal RNA (SSU rRNA) gene pyrosequencing, were used to infer microbial metabolic pathways. The δ¹³C values of dissolved inorganic carbon (DIC) in porewaters ranged downcore from ?2.5‰ to ?3.7‰, while δ¹³C values for the corresponding sedimentary particulate OC (POC) varied from ?26.2‰ to ?23.1‰. The δ¹³C values of PLFAs ranged between ?29‰ and ?35‰ throughout the sediment core, consistent with a microbial community dominated by heterotrophs. The SSU rRNA gene pyrosequencing revealed that members of this microbial community were dominated by β‐, δ‐, and γ‐Proteobacteria, Actinobacteria, Chloroflexi and Bacteroidetes. Among the sequenced organisms, many appear to be related to known heterotrophs that utilize OC sources such as amino acids, oligosaccharides, and lactose, consistent with our interpretation from δ¹³C_PLFA analysis. Integrating phospholipids analyses with porewater chemistry, δ¹³C_DIC and δ¹³C_POC values and SSU rRNA gene sequences provides a more comprehensive understanding of microbial communities and carbon cycling in marine sediments, including those of this unique ice shelf environment.     

Underwater sinkhole sediments sequester Lake Huron’s carbon

Lake Huron’s submerged sinkhole habitats are impacted by high-conductivity groundwater that allows photosynthetic cyanobacterial mats to form over thick, carbon-rich sediments. To better understand nutrient cycling in these habitats, we measured the stable isotopic content of carbon and nitrogen in organic and inorganic carbon pools in Middle Island sinkhole, a ~23 m deep feature influenced by both groundwater and overlying lake water. Two distinct sources of dissolved CO₂ (DIC) were available to primary producers. Lake water DIC (δ ¹³C = ?0.1 ‰) differed by +5.9 ‰ from groundwater DIC (δ ¹³C = ?6.0 ‰). Organic carbon fixed by primary producers reflected the two DIC sources. Phytoplankton utilizing lake water DIC were more enriched in ¹³C (δ ¹³C = ?22.2 to ?23.2 ‰) than mat cyanobacteria utilizing groundwater DIC (δ ¹³C = ?26.3 to ?30.0 ‰). Sinkhole sediments displayed an isotopic signature (δ ¹³C = ?23.1 ‰) more similar to sedimenting phytoplankton than the cyanobacterial mat. Corroborated by sediment C/N ratios, these data suggest that the carbon deposited in sinkhole sediments originates primarily from planktonic rather than benthic sources. ²¹⁰Pb/¹³⁷Cs radiodating suggests rapid sediment accumulation and sub-bottom imaging indicated a massive deposit of organic carbon beneath the sediment surface. We conclude that submerged sinkholes may therefore act as nutrient sinks within the larger lake ecosystem.     

Stromatolite records of environmental change in perennially ice-covered Lake Joyce,McMurdo Dry Valleys,Antarctica

Calcite-rich columnar stromatolites grew in perennially ice-covered Lake Joyce in the McMurdo Dry Valleys, Antarctica, during a period of environmental change associated with rising lake level. Stromatolite calcite contains carbon and oxygen isotope records of changes to microbial activity in response to variable light environments and water chemistry through time. The stromatolites grew synchronously with correlative calcite zones. The innermost (oldest) calcite zone has a wide range of δ¹³C_calcite values consistent with variable photosynthetic effects on local DIC ¹³C/¹²C. Subsequent calcite zones preserve a progressive enrichment in δ¹³C_calcite values of approximately + 2.6‰ through time, with δ¹³C_calcite values becoming less variable. This enrichment likely records the removal of ¹²C by photosynthesis from the DIC reservoir over decades, with photosynthetic effects decreasing as light levels became lower and more consistent through time. Mean δ¹⁸O_calcite values of the innermost calcified zone were at least 1‰ lower than those of the other calcified zones (t test p-level < 0.001). The significant difference in δ¹⁸O_calcite values between the innermost and other calcified zones could be a product of mixing source waters with different isotopic values associated with the initiation of lake stratification associated with rising lake level. Overall, Lake Joyce stromatolites record significant lateral variability in relative photosynthetic rate and long-lived lake water stratification with microbial modification of the DIC pool. Such processes provide criteria for interpreting microbial activity within polar paleolake deposits and may shed light on variability in lake environments associated with changing climate in the McMurdo Dry Valleys.     

Effects of land use on sources and ages of inorganic and organic carbon in temperate headwater streams

The amounts, sources and relative ages of inorganic and organic carbon pools were assessed in eight headwater streams draining watersheds dominated by either forest, pasture, cropland or urban development in the lower Chesapeake Bay region (Virginia, USA). Streams were sampled at baseflow conditions six different times over 1 year. The sources and ages of the carbon pools were characterized by isotopic (δ¹³C and ?¹⁴C) analyses and excitation emission matrix fluorescence with parallel factor analysis (EEM–PARAFAC). The findings from this study showed that human land use may alter aquatic carbon cycling in three primary ways. First, human land use affects the sources and ages of DIC by controlling different rates of weathering and erosion. Relative to dissolved inorganic carbon (DIC) in forested streams which originated primarily from respiration of young, ¹⁴C-enriched organic matter (OM; δ¹³C = ?22.2 ± 3 ‰; ?¹⁴C = 69 ± 14 ‰), DIC in urbanized streams was influenced more by sedimentary carbonate weathering (δ¹³C = ?12.4 ± 1 ‰; ?¹⁴C = ?270 ± 37 ‰) and one of pasture streams showed a greater influence from young soil carbonates (δ¹³C = ?5.7 ± 2.5 ‰; ?¹⁴C = 69 ‰). Second, human land use alters the proportions of terrestrial versus autochthonous/microbial sources of stream water OM. Fluorescence properties of dissolved OM (DOM) and the C:N of particulate OM (POM) suggested that streams draining human-altered watersheds contained greater relative contributions of DOM and POM from autochthonous/microbial sources than forested streams. Third, human land uses can mobilize geologically aged inorganic carbon and enable its participation in contemporary carbon cycling. Aged DOM (?¹⁴C = ?248 to ?202 ‰, equivalent¹⁴C ages of 1,811–2,284 years BP) and POM (?¹⁴C = ?90 to ?88 ‰, ¹⁴C ages of 669–887 years BP) were observed exclusively in urbanized streams, presumably a result of autotrophic fixation of aged DIC (?297 to ?244 ‰, ¹⁴C age = 2,251–2,833 years BP) from sedimentary shell dissolution and perhaps also watershed export of fossil fuel carbon. This study demonstrates that human land use may have significant impacts on the amounts, sources, ages and cycling of carbon in headwater streams and their associated watersheds.     

Fatty acid and stable isotope characteristics of sea ice and pelagic particulate organic matter in the Bering Sea: tools for estimating sea ice algal contribution to Arctic food web production

We determined fatty acid (FA) profiles and carbon stable isotopic composition of individual FAs (δ¹³C_FA values) from sea ice particulate organic matter (i-POM) and pelagic POM (p-POM) in the Bering Sea during maximum ice extent, ice melt, and ice-free conditions in 2010. Based on FA biomarkers, differences in relative composition of diatoms, dinoflagellates, and bacteria were inferred for i-POM versus p-POM and for seasonal succession stages in p-POM. Proportions of diatom markers were higher in i-POM (16:4n-1, 6.6–8.7 %; 20:5n-3, 19.6–25.9 %) than in p-POM (16:4n-1, 1.2–4.0 %; 20:5n-3, 5.5–14.0 %). The dinoflagellate marker 22:6n-3/20:5n-3 was highest in p-POM. Bacterial FA concentration was higher in the bottom 1 cm of sea ice (14–245 μg L^?1) than in the water column (0.6–1.7 μg L^?1). Many i-POM δ¹³C_FA values were higher (up to ~10 ‰) than those of p-POM, and i-POM δ¹³C_FA values increased with day length. The higher i-POM δ¹³C_FA values are most likely related to the reduced dissolved inorganic carbon (DIC) availability within the semi-closed sea ice brine channel system. Based on a modified Rayleigh equation, the fraction of sea ice DIC fixed in i-POM ranged from 12 to 73 %, implying that carbon was not limiting for primary productivity in the sympagic habitat. These differences in FA composition and δ¹³C_FA values between i-POM and p-POM will aid efforts to track the proportional contribution of sea ice algal carbon to higher trophic levels in the Bering Sea and likely other Arctic seas.     

Kangaroo tooth enamel oxygen and carbon isotope variation on a latitudinal transect in southern Australia: implications for palaeoenvironmental reconstruction

Tooth enamel apatite carbonate carbon and oxygen isotope ratios of modern kangaroos (Macropus spp.) collected on a 900-km latitudinal transect spanning a C₃–C₄ transition zone were analysed to create a reference set for palaeoenvironmental reconstruction in southern Australia. The carbon isotope composition of enamel carbonate reflects the proportional intake of C₃ and C₄ vegetation, and its oxygen isotope composition reflects that of ingested water. Tooth enamel forms incrementally, recording dietary and environmental changes during mineralisation. Analyses show only weak correlations between climate records and latitudinal changes in δ¹³C and δ¹⁸O. No species achieved the δ¹³C values (~?1.0 ‰) expected for 100 % C₄ grazing diets; kangaroos at low latitudes that are classified as feeding primarily on C₄ grasses (grazers) have δ¹³C of up to ?3.5 ‰. In these areas, δ¹³C below ?12 ‰ suggests a 100 % C₃ grass and/or leafy plant (browse) diet while animals from higher latitude have lower δ¹³C. Animals from semi-arid areas have δ¹⁸O of 34–40 ‰, while grazers from temperate areas have lower values (~28–30 ‰). Three patterns with implications for palaeoenvironmental reconstruction emerge: (1) all species in semi-arid areas regularly browse to supplement limited grass resources; (2) all species within an environmental zone have similar carbon and oxygen isotope compositions, meaning data from different kangaroo species can be pooled for palaeoenvironmental investigations; (3) relatively small regional environmental differences can be distinguished when δ¹³C and δ¹⁸O data are used together. These data demonstrate that diet–isotope and climate–isotope relationships should be evaluated in modern ecosystems before application to the regional fossil record.     

Use of stable isotopes to understand food webs in Macao wetlands

In this study, components of the food-web in Macao wetlands were quantified using stable isotope ratio techniques based on carbon and nitrogen values. The δ¹³C and δ¹⁵N values of particulate organic matter (δ¹³C_POM and δ¹⁵N_POM, respectively) ranged from ?30.64 ± 1.0 to ?28.1 ± 0.7 ‰, and from ?1.11 ± 0.8 to 3.98 ± 0.7 ‰, respectively. The δ¹³C values of consumer species ranged from ?33.94 to ?16.92 ‰, showing a wide range from lower values in a freshwater lake and inner bay to higher values in a mangrove forest. The distinct dietary habits of consumer species and the location-specific food source composition were the main factors affecting the δ¹³C values. The consumer ¹⁵N-isotope enrichment values suggested that there were three trophic levels; primary, secondary, and tertiary. The primary consumer trophic level was represented by freshwater herbivorous gastropods, filter-feeding bivalves, and plankton-feeding fish, with a mean δ¹⁵N value of 5.052 ‰. The secondary consumer level included four deposit-feeding fish species distributed in Fai Chi Kei Bay and deposit-feeding gastropods in the Lotus Flower Bridge flat, with a mean δ¹⁵N value of 6.794 ‰. The tertiary consumers group consisted of four crab species, one shrimp species, and four fish species in the Lotus Flower Bridge Flat, with a mean δ¹⁵N value of 13.473 ‰. Their diet mainly comprised organic debris, bottom fauna, and rotten animal tissues. This study confirms the applicability of the isotopic approach in food web studies.     

Carbon isotopic composition of lipid biomarkers from an endoevaporitic gypsum crust microbial mat reveals cycling of mineralized organic carbon

Microbial mats that inhabit gypsum deposits in ponds at Guerrero Negro, Baja California Sur, Mexico, developed distinct pigmented horizons that provided an opportunity to examine the fixation and flow of carbon through a trophic structure and, in conjunction with previous phylogenetic analyses, to assess the diagenetic fates of molecular δ¹³C biosignatures. The δ¹³C values of individual biomarker lipids, total carbon, and total organic carbon (TOC) were determined for each of the following horizons: tan‐orange (TO) at the surface, green (G), purple (P), and olive‐black (OB) at the bottom. δ¹³C of individual fatty acids from intact polar lipids (IPFA) in TO were similar to δ¹³C of dissolved inorganic carbon (DIC) in the overlying water column, indicating limited discrimination by cyanobacteria during CO₂ fixation. δ¹³C_TOC of the underlying G was 3‰ greater than that of TO. The most δ¹³C‐depleted acetogenic lipids in the upper horizons were the cyanobacterial biomarkers C₁₇ n‐alkanes and polyunsaturated fatty acids. Bishomohopanol was 4 to 7‰ enriched, relative to alkanes and intact polar fatty acids (IPFA), respectively. Acyclic C₂₀ isoprenoids were depleted by 14‰ relative to bishomohopanol. Significantly, ?[δ¹³C_TOC ? δ¹³C_∑IPFA] increased from 6.9‰ in TO to 14.7‰ in OB. This major trend might indicate that ¹³C‐enriched residual organic matter accumulated at depth. The permanently anoxic P horizon was dominated by anoxygenic phototrophs and sulfate‐reducing bacteria. P hosted an active sulfur‐dependent microbial community. IPFA and bishomohopanol were ¹³C‐depleted relative to upper crust by 7 and 4‰, respectively, and C₂₀ isoprenoids were somewhat ¹³C‐enriched. Synthesis of alkanes in P was evidenced only by ¹³C‐depleted n‐octadecane and 8‐methylhexadecane. In OB, the marked increase of total inorganic carbon δ¹³C (δ¹³C_TIC) of >6‰ perhaps indicated terminal mineralization. This δ¹³C_TIC increase is consistent with degradation of the osmolyte glycine betaine by methylotrophic methanogens and loss of ¹³C‐depleted methane from the mat.     

Symbiotic performance of grain and wild herbaceous legumes in the Okavango Delta and Tswapong region of Botswana

The low inherent soil fertility, especially nitrogen (N) constrains arable agriculture in Botswana. Nitrogen is usually added to soil through inorganic fertilizer application. In this study, biological nitrogen fixation by legumes is explored as an alternative source of N. The objectives of this study were to measure levels of N₂ fixation by grain legumes such as cowpea, Bambara groundnut and groundnut in farmers’ fields as well as to estimated N₂ fixation by indigenous herbaceous legumes growing in the Okavango Delta. Four flowering plants per species were sampled from the panhandle part of the Okavango Delta and Tswapong area. Nitrogen fixation was measured using the ¹⁵N stable isotope natural abundance technique. The δ¹⁵N values of indigenous herbaceous legumes indicated that they fixed N₂ (?1.88 to +1.35 ‰) with the lowest value measured in Chamaecrista absus growing in Ngarange (Okavango Delta). The δ¹⁵N values of grain legumes growing on farmers’ fields ranging from ?1.2 ‰ to +3.3 ‰ indicated that they were fixing N₂. For grain legumes growing at most farms, %Ndfa were above 50% indicating that they largely depended on symbiotic fixation for their N nutrition. With optimal planting density, Bambara groundnuts on farmers’ fields could potentially fix over 90 kg N/ha in some parts of Tswapong area and about 60 kg N/ha in areas around the Okavango Delta. Results from this study have shown that herbaceous indigenous legumes and cultivated legumes play an important role in the cycling of N in the soil. It has also been shown that biological N₂ on farmer’s field could potentially supply the much needed N for the legumes and the subsequent cereal crops if plant densities are optimized with the potential to increase food security and mitigate climate change.     

Thermophilic Archaeal Diversity and Methanogenesis from El Tatio Geyser Field,Chile

The hydrothermal fluid chemistry at El Tatio Geyser Field (ETGF) in northern Chile suggests that biogenic CO₂–CH₄ cycling may play an important role in water chemistry, and relatively low sulfate (0.6–1 mM) and high molecular hydrogen (H₂) concentrations (67–363 nM) suggest that methanogenic Archaea are present in ETGF microbial mats. In this study, δ¹³C analysis of dissolved inorganic carbon and methane was not indicative of biogenic methane production (δ¹³C_CH4 values ranging from ?15‰ to ?5.3‰); however, methanogenic Archaea were successfully cultured from each of the hydrothermal sites sampled. Sanger sequencing using universal Archaea primers identified putative methanogenic orders with varying metabolic capabilities, including Methanobacteriales, Methanomicrobiales and Methanosarcinales.     

Carbon dioxide and methane emissions from interfluvial wetlands in the upper Negro River basin, Brazil

Extensive interfluvial wetlands occur in the upper Negro River basin (Brazil) and contain a mosaic of vegetation dominated by emergent grasses and sedges with patches of shrubs and palms. To characterize the release of carbon dioxide and methane from these habitats, diffusive and ebullitive emissions and transport through plant aerenchyma were measured monthly during 2005 in permanently and seasonally flooded areas. CO₂ emissions averaged 2193 mg C m^?2 day^?1. Methane was consumed in unflooded environments and emitted in flooded environments with average values of ?4.8 and 60 mg C m^?2 day^?1, respectively. Bubbles were emitted primarily during falling water periods when hydrostatic pressure at the sediment?Cwater interface declined. CO₂ and CH₄ emissions increased when dissolved O₂ decreased and vegetation was more abundant. Total area and seasonally varying flooded areas for two wetlands, located north and south of the Negro River, were determined through analysis of synthetic aperture radar and optical remotely sensed data. The combined areas of these two wetlands (3000 km²) emitted 1147 Gg C year^?1 as CO₂ and 31 Gg C year^?1 as CH₄. If these rates are extrapolated to the area occupied by hydromorphic soils in the upper Negro basin, 63 Tg C year^?1 of CO₂ and 1.7 Tg C year^?1 as CH₄ are estimated as the regional evasion to the atmosphere.     

Facies development and sequence stratigraphy of the Ludfordian (Upper Silurian) deposits in the Zbruch River Valley, Podolia, western Ukraine: local facies overprint on the δ13Ccarb record of a global stable carbon isotope excursion

The Ludfordian (Upper Silurian) succession in Podolia, western Ukraine, represents a Silurian carbonate platform developed in an epicontinental sea on the shelf of the paleocontinent of Baltica. Coeval deposits throughout this basin record a positive stable carbon isotope excursion known as the Lau excursion. The record of this excursion in Podolia exhibits an unusual amplitude from highly positive (+6.9 ‰) to highly negative (?5.0 ‰) δ¹³C_carb values. In order to link δ¹³C_carb development with facies, five sections in the Zbruch River Valley were examined, providing microfacies characterization and revised definitions of the Isakivtsy, Prygorodok, and Varnytsya Formations. The Isakivtsy Fm. is developed as dolosparite replacing originally bioclastic limestone. The Prygorodok Fm., recording strongly depleted (down to ?10.53 ‰) to near zero (0.12 ‰) δ¹³C_carb values is developed as laminated, organic-rich dolomicrite with metabentonite and quartz siltstone beds. The Varnytsya Fm. is characterized by peritidal deposition with consistent, slightly negative δ¹³C_carb values (?0.57 to ?3.20 ‰). It is proposed that dolomitization of the Isakivtsy Fm. is associated with a sequence boundary and erosional surface. The overlying Prygorodok Fm. represents the proximal part of a TST deposited in restricted and laterally extremely variable environments dominated by microbial carbonate production. The transition to the overlying Varnytsya Fm. facies is marked by a maximum flooding surface. The SB and MFS are potentially correlative within the basin and support a global rapid sea-level fall previously proposed for this interval. The interpretation of the Prygorodok Fm. as coastal lake deposits may explain the unusual δ¹³C_carb values and constitute one of the few records of this type of environment identified in the early Paleozoic.     

Disproportionate Contribution of Riparian Inputs to Organic Carbon Pools in Freshwater Systems

A lack of appropriate proxies has traditionally hampered our ability to distinguish riverine organic carbon (OC) sources at the landscape scale. However, the dissection of C₄ grasslands by C₃-enriched riparian vegetation, and the distinct carbon stable isotope signature (δ¹³C) of these two photosynthetic pathways, provides a unique setting to assess the relative contribution of riparian and more distant sources to riverine C pools. Here, we compared δ¹³C signatures of bulk sub-basin vegetation (δ¹³C_VEG) with those of riverine OC pools for a wide range of sites within two contrasting river basins in Madagascar. Although C₃-derived carbon dominated in the eastern Rianala catchment, consistent with the dominant vegetation, we found that in the C₄-dominated Betsiboka basin, riverine OC is disproportionately sourced from the C₃-enriched riparian fringe, irrespective of climatic season, even though δ¹³C_VEG estimates suggest as much as 96% of vegetation cover in some Betsiboka sub-basins may be accounted for by C₄ biomass. For example, δ¹³C values for river bed OC were on average 6.9 ± 2.7‰ depleted in ¹³C compared to paired estimates of δ¹³C_VEG. The disconnection of the wider C₄-dominated basin is considered the primary driver of the under-representation of C₄-derived C within riverine OC pools in the Betsiboka basin, although combustion of grassland biomass by fire is likely a subsidiary constraint on the quantity of terrestrial organic matter available for export to these streams and rivers. Our findings carry implications for the use of sedimentary δ¹³C signatures as proxies for past forest-grassland distribution and climate, as the C₄ component may be considerably underestimated due to its disconnection from riverine OC pools.     

Carbonate facies‐specific stable isotope data record climate,hydrology, and microbial communities in Great Salt Lake,UT

Organic and inorganic stable isotopes of lacustrine carbonate sediments are commonly used in reconstructions of ancient terrestrial ecosystems and environments. Microbial activity and local hydrological inputs can alter porewater chemistry (e.g., pH, alkalinity) and isotopic composition (e.g., δ¹⁸O_water, δ¹³C_DIC), which in turn has the potential to impact the stable isotopic compositions recorded and preserved in lithified carbonate. The fingerprint these syngenetic processes have on lacustrine carbonate facies is yet unknown, however, and thus, reconstructions based on stable isotopes may misinterpret diagenetic records as broader climate signals. Here, we characterize geochemical and stable isotopic variability of carbonate minerals, organic matter, and water within one modern lake that has known microbial influences (e.g., microbial mats and microbialite carbonate) and combine these data with the context provided by 16S rRNA amplicon sequencing community profiles. Specifically, we measure oxygen, carbon, and clumped isotopic compositions of carbonate sediments (δ¹⁸O_carb, δ¹³C_carb, ?₄₇), as well as carbon isotopic compositions of bulk organic matter (δ¹³C_org) and dissolved inorganic carbon (DIC; δ¹³C_DIC) of lake and porewater in Great Salt Lake, Utah from five sites and three seasons. We find that facies equivalent to ooid grainstones provide time‐averaged records of lake chemistry that reflect minimal alteration by microbial activity, whereas microbialite, intraclasts, and carbonate mud show greater alteration by local microbial influence and hydrology. Further, we find at least one occurrence of ?₄₇ isotopic disequilibrium likely driven by local microbial metabolism during authigenic carbonate precipitation. The remainder of the carbonate materials (primarily ooids, grain coatings, mud, and intraclasts) yield clumped isotope temperatures (T(?₄₇)), δ¹⁸O_carb, and calculated δ¹⁸O_water in isotopic equilibrium with ambient water and temperature at the time and site of carbonate precipitation. Our findings suggest that it is possible and necessary to leverage diverse carbonate facies across one sedimentary horizon to reconstruct regional hydroclimate and evaporation–precipitation balance, as well as identify microbially mediated carbonate formation.     

Species-specific differences in temporal and spatial variation in δ13C of plant carbon pools and dark-respired CO2 under changing environmental conditions

Stable carbon isotope signatures are often used as tracers for environmentally driven changes in photosynthetic δ¹³C discrimination. However, carbon isotope signatures downstream from carboxylation by Rubisco are altered within metabolic pathways, transport and respiratory processes, leading to differences in δ¹³C between carbon pools along the plant axis and in respired CO₂. Little is known about the within-plant variation in δ¹³C under different environmental conditions or between species. We analyzed spatial, diurnal, and environmental variations in δ¹³C of water soluble organic matter (δ¹³C_WSOM) of leaves, phloem and roots, as well as dark-respired δ¹³CO₂ (δ¹³C_res) in leaves and roots. We selected distinct light environments (forest understory and an open area), seasons (Mediterranean spring and summer drought) and three functionally distinct understory species (two native shrubs—Halimium halimifolium and Rosmarinus officinalis—and a woody invader—Acacia longifolia). Spatial patterns in δ¹³C_WSOM along the plant vertical axis and between respired δ¹³CO₂ and its putative substrate were clearly species specific and the most δ¹³C-enriched and depleted values were found in δ¹³C of leaf dark-respired CO₂ and phloem sugars, ~?15 and ~?33 ‰, respectively. Comparisons between study sites and seasons revealed that spatial and diurnal patterns were influenced by environmental conditions. Within a species, phloem δ¹³C_WSOM and δ¹³C_res varied by up to 4 ‰ between seasons and sites. Thus, careful characterization of the magnitude and environmental dependence of apparent post-carboxylation fractionation is needed when using δ¹³C signatures to trace changes in photosynthetic discrimination.     

Evaluation of commercial and natural food in experimental cultures of white shrimp based on stable carbon isotopes

The farming of shrimp is developing quickly worldwide, and recently, ingredients such as seaweeds in low proportion (25 to 4 %), incorporated into the commercial food, have been shown to improve the shrimp productive variables. The change of commercial foods to commercial feed with a proportion of natural food, and finally, to natural food has been little and simultaneously evaluated. The aim of our study was to determine the relative contribution of dietary carbon to the growth of Litopenaeus vannamei fed with a proportion of 4 % Sargassum (δ¹³C = ?20.9?±?0.05?‰), 4 % Ulva (δ¹³C = ?20.6?±?0.6?‰) meal, and a control diet (δ¹³C?=??22.6?±?0.2?‰) in 60-L tanks for 30 days, and finally, with the green seaweed Ulva spp. (δ¹³C = ?13.2?±?0.25?‰) and Ulva meal (δ¹³C = ?14.5?±?0.6?‰) in open-air ponds for 120 days, by measuring δ¹³C for each of the foods and in the muscle of shrimp. After 15 days, the rates of metabolic turnover (Δ¹³C = δ¹³C_shrimp ? δ¹³C_food) were constant until the end of the experiment in the tanks. The muscle of shrimp assimilated carbon from all diets, which demonstrated the potential use of combined diets and the optimization of their use in diets containing seaweed. Our data will be useful in future interpretations of field and laboratory isotopic values for this species.     

Spatial and temporal dynamics of diffusive methane emissions in the Okavango Delta,northern Botswana,Africa

Global warming is associated with the continued increase in the atmospheric concentrations of greenhouse gases; carbon dioxide, methane (CH₄) and nitrous oxide. Wetlands constitute the largest single natural source of atmospheric CH₄ in the world contributing between 100 and 231 Tg year^?1 to the total budget of 503–610 Tg year^?1, approximately 60 % of which is emitted from tropical wetlands. We conducted diffusive CH₄ emission measurements using static chambers in river channels, floodplains and lagoons in permanent and seasonal swamps in the Okavango Delta, Botswana. Diffusive CH₄ emission rates varied between 0.24 and 293 mg CH₄ m^?2 h^?1, with a mean (±SE) emission of 23.2 ± 2.2 mg CH₄ m^?2 h^?1 or 558 ± 53 mg CH₄ m^?2 day^?1. These emission rates lie within the range reported for other tropical wetlands. The emission rates were significantly higher (P < 0.007) in permanent than in seasonal swamps. River channels exhibited the highest average fluxes at 31.3 ± 5.4 mg CH₄ m^?2 h^?1 than in floodplains (20.4 ± 2.5 mg CH₄ m^?2 h^?1) and lagoons (16.9 ± 2.6 mg CH₄ m^?2 h^?1). Diffusive CH₄ emissions in the Delta were probably regulated by temperature since emissions were highest (20–300 mg CH₄ m^?2 h^?1) and lowest (0.2–3.0 mg m^?2 h^?1) during the warmer-rainy and cooler winter seasons, respectively. Surface water temperatures between December 2010 and January 2012 varied from 15.3 °C in winter to 33 °C in summer. Assuming mean inundation of 9,000 km², the Delta’s annual diffusive emission was estimated at 1.8 ± 0.2 Tg, accounting for 2.8 ± 0.3 % of the total CH₄ emission from global tropical wetlands.     

Heterogeneous dissolved organic nitrogen supply over a coral reef: first evidence from nitrogen stable isotope ratios

Dissolved organic nitrogen (DON) potentially plays a major role in sustaining the high productivity and biological diversity of coral reefs. However, data are scarce regarding sources and sinks of DON. This study, for the first time, determined the ¹⁵N isotopic composition of total dissolved nitrogen (δ¹⁵N_TDN), reflecting the isotopic signature of DON, in the water column over a coral reef. The uniformity in δ¹⁵N_TDN during high tide (3.2 ± 0.3 ‰) indicated that the DON was mainly derived from offshore waters. In contrast, higher spatial heterogeneity of δ¹⁵N_TDN (3.1 ± 0.9 ‰) and DON concentrations during low tide indicated the existence of local DON sources patchily distributed over the reef. Low δ¹⁵N_TDN values located mid-reef were indicative of DON release from organisms that obtained their N via N₂ fixation, whereas high δ¹⁵N_TDN appeared to reflect localized release of DON by organisms exposed to dissolved inorganic nitrogen with elevated ¹⁵N, such as from terrestrial and offshore inputs. Collectively, the results highlight the importance of spatial patterns in DON release from reef communities in the N cycling of coral reefs.