水稻耐盐/碱性鉴定评价方法

土壤盐/碱化是盐/碱稻作区水稻生产稳定发展的主要限制因素.为了提高水稻耐盐/碱性,扩大水稻种植面积,减轻盐/碱胁迫导致的水稻减产,许多学者广泛开展了水稻耐盐/碱性的基因型差异、生理生化、遗传及定位等研究,并取得了显著成绩.但国内在耐盐/碱性鉴定评价方法方面还缺乏统一标准,这影响着水稻耐盐/碱性研究的深入开展.本文阐述了国内外至今所采用的水稻耐盐/碱性鉴定方法、耐盐/碱指标和分级标准等,以期为我国水稻耐盐/碱性鉴定评价技术规范的制定以及水稻耐盐/碱性种质资源鉴定、生理生化分析和遗传育种提供参考依据.     

普通野生稻染色体片段代换系的孕穗期耐冷性研究

为筛选出在苗期和孕穗期都具有强耐冷性的种质以供水稻耐冷研究与育种利用,本研究利用人工低温胁迫的方法,对20份苗期耐冷的普通野生稻染色体片段代换系进行了孕穗期耐冷性鉴定评价。结果表明:(1)在20份代换系材料中,孕穗期耐冷性表现强(3级)、中(5级)和弱(7级)级别的材料为2份、15份和3份,分别占供试材料的10%、75%和15%;(2)水稻苗期和孕穗期的耐冷性呈显著正相关(p0.05),所鉴定出的2份抗性3级材料(DC907和DC866)不但可以作为苗期耐冷性抗源,同时也可以作为孕穗期耐寒性抗源;(3)可溶性蛋白、可溶性糖、游离氨基酸、脯氨酸、丙二醛和超氧化物歧化酶等各项生理指标与相对结实率之间均无显著的相关关系,因此均不适宜作为孕穗期耐冷性的鉴定评价指标。     

中国水稻微核心种质不同生育时期耐冷性鉴定及其相关分析

以204份中国水稻微核心种质为试验材料,进行了水稻发芽期、芽期、幼苗期、孕穗期等耐冷性鉴定及其相关性分析。结果表明,水稻各生育时期耐冷性在籼粳亚种间、各种质之间存在明显的差异。粳稻种质的耐冷性明显强于籼稻种质,但籼稻种质中也存在耐冷性较强的种质。高阳淀稻大红芒、肥东塘稻、木樨球、卫国、兴国、山酒谷、中花8号等粳稻种质和包选21号、红米三担白、寸谷糯、红谷等籼稻种质在水稻各生育时期均表现较强的耐冷性,在水稻耐冷性育种及耐冷基因发掘研究中应加以利用。自然低温和冷水胁迫下水稻结实率与低温下发芽率呈显著或极显著正相关,而与死苗率呈显著负相关,即低温下发芽期耐冷性和芽期耐冷性强的水稻种质一般表现为较强的孕穗期耐冷性。认为低温下发芽率和芽期低温处理后的死苗率可以作为孕穗期耐冷性早期鉴定的间接指标。     

中国水稻微核心种质不同生育时期耐冷性鉴定及其相关分析

以204份中国水稻微核心种质为试验材料,进行了水稻发芽期、芽期、幼苗期、孕穗期等耐冷性鉴定及其相关性分析。结果表明,水稻各生育时期耐冷性在籼粳亚种间、各种质之间存在明显的差异。粳稻种质的耐冷性明显强于籼稻种质,但籼稻种质中也存在耐冷性较强的种质。高阳淀稻大红芒、肥东塘稻、木樨球、卫国、兴国、山酒谷、中花8号等粳稻种质和包选21号、红米三担白、寸谷糯、红谷等籼稻种质在水稻各生育时期均表现较强的耐冷性,在水稻耐冷性育种及耐冷基因发掘研究中应加以利用。自然低温和冷水胁迫下水稻结实率与低温下发芽率呈显著或极显著正相关,而与死苗率呈显著负相关,即低温下发芽期耐冷性和芽期耐冷性强的水稻种质一般表现为较强的孕穗期耐冷性。认为低温下发芽率和芽期低温处理后的死苗率可以作为孕穗期耐冷性早期鉴定的间接指标。     

基于引物扩增受阻突变技术开发水稻耐冷基因CTB4a特异性分子标记

水稻(Oryza sativa)作为热带与亚热带起源的作物对低温敏感.对水稻种质进行耐冷性鉴定,能筛选出耐冷性强的种质,发展耐冷基因分子标记,能够有效鉴别种质中耐冷基因的基因型.本研究使用芽期4℃低温处理10d对41份水稻材料进行芽期耐冷鉴定,对品种的芽期耐冷能力进行评价,获得了参试材料中除了'昆明小白谷'之外的芽期耐冷性最强的品种'南特号'.对已克隆的耐冷基因CTB4a开发分子标记,能够辅助选择水稻的耐冷育种.水稻孕穗期耐冷基因CTB4a来源于'昆明小白谷',能够影响水稻抵抗低温的能力.参照公布的CTB4a序列信息,从中挑选出序列中的作用位点SNP(单核苷酸多态性,single nucleotide polymorphism),结合引物扩增受阻突变技术(Penta-primer amplification refractory mutation system,PARMS),用Primer 6.0设计引物,建立CTB4a基因荧光分子标记GM-CTB4a,使用荧光分子标记GM-CTB4a对41份水稻品种进行鉴定,使用酶标仪在'昆明小白谷'中检测到利用标记扩增产物中包含'昆明小白谷'特异SNP、T碱基引物携带的FAM荧光信号,在另外40份品种的扩增产物中检测到包含作用位点的C碱基引物携带的HEX荧光信号.本研究利用设计的分子标记,鉴定了 41份水稻品种的耐冷性和基因型.比对分析耐冷性和基因型鉴定结果,说明我们开发的分子标记GM-CTB4a特异性较强,具有实际应用价值.研究结果为利用水稻孕穗期耐冷基因CTB4a培育强耐冷水稻品种奠定坚实基础.     

水稻耐冷相关基因克隆研究进展

全球约有一半的人口以稻米为主食,然而,大多数栽培水稻品种(尤其是籼稻品种)的耐冷性不强,易受冷害(冰点以上低温危害)。采用分子育种方法培育耐冷水稻新品种是提高水稻耐冷性、减轻冷害的措施之一,对水稻耐冷相关基因进行定位与克隆是水稻耐冷分子育种的重要环节。介绍了以东乡野生稻为研究对象的耐冷相关基因定位以及以栽培稻为研究对象的OsDREB1A与OSISAP1等耐冷相关基因的克隆,并指出了今后该领域研究的重点。     

基于单片段代换系的水稻芽期耐冷QTL定位和聚合北大核心CSCD

芽期耐冷性是华南双季稻地区水稻育种的一个重要目标。虽然水稻芽期耐冷QTL的标记定位已取得了一定的进展,但是这些QTL/基因尚未在水稻育种中得到有效的应用。定位稳定表达的芽期耐冷QTL,开展QTL聚合育种是水稻芽期耐冷性育种取得突破的关键。在本研究中,利用以粳稻IR65598-112-2为供体,籼稻华粳籼74为受体构建的单片段代换系(SSSL)开展芽期耐冷QTL定位,并进行聚合育种。通过评价SSSL与受体华粳籼74的芽期耐冷性差异,定位了2个稳定的芽期耐冷QTLs(qCTBB-3和qCTBB-12)。试验表明,分别携带有耐冷QTL qCTBB-3和qCTBB-12的SSSL在冷处理后都比华粳籼74表现出更高的幼苗成活率。通过代换作图,发现在qCTBB-3区间存在2个紧密连锁的耐冷QTLs(qCTBB-3a和qCTBB-3b)。利用本研究携带qCTBB-3a/qCTBB-3b的单片段代换系和前期研究鉴定出的芽期耐冷QTL qCTBB-6的单片段代换系为亲本进行杂交,通过分子标记辅助选择,获得了2份含有这3个QTL的聚合系。耐冷性评价表明,来源于两个供体/亲本的QTL不存在显著的上位性效应,聚合系的芽期耐冷性较亲本显著增强。可见,通过聚合芽期耐冷QTLs qCTBB-3a/qCTBB-3b和qCTBB-6能显著提高水稻芽期的耐冷性,获得的QTL及三耐冷QTL聚合系为水稻芽期耐冷性分子育种提供了优良的基因资源和亲本材料。     

广西水稻地方品种耐冷性鉴定及相关分析

对419份广西水稻地方品种初级核心种质进行芽期、苗期的耐冷性鉴定及相关分析,结果表明:广西水稻地方品种芽期、苗期耐冷性主要集中在7级和9级,总体耐冷性较弱。芽期、苗期极强耐冷种质(1级)分别为24份和27份,占参试总数的5.73%和6.44%,其中10份种质芽期和苗期均表现极强耐冷(1级)。芽期、苗期耐冷性呈极显著正相关(r=0.66)。粳稻芽期、苗期耐冷性均显著高于籼稻;粘糯稻之间耐冷性差异是由籼粳稻类型的耐冷差异引起的;来自高寒山区稻作区的品种芽期和苗期平均耐冷表现最强。利用34个SSR标记与芽期、苗期耐冷性进行Pearson相关分析,在第7和第9染色体上,各鉴定出1个同时与芽期和苗期耐冷性相关联的位点。本研究为水稻芽期、苗期耐冷育种提供新的抗源材料,并为水稻耐冷基因定位及机理研究奠定基础。     

不同海拔来源云南地方稻种资源各生育时期耐冷性鉴定评价

本研究以不同海拔生态区来源的307份云南地方稻种资源为试验材料,进行了水稻发芽期、芽期、苗期、孕穗开花期等4个生育时期耐冷性的鉴定评价.鉴定结果表明,云南地方稻种的各生育时期耐冷性分级与其分布的生态区海拔高度均呈显著或极显著的负相关,即云南地方稻种的耐冷性与其来源生态区的海拔高度密切相关,分布在高海拔生态区的地方稻种各...     

水稻种质资源芽期耐冷性的鉴定与评价

对新收集的879份水稻种质资源进行了水稻芽期耐冷性的鉴定与评价,从中筛选出芽期耐冷性极强的水稻种质资源39份,均为贵州地方粳稻品种.供试粳稻品种61.23%具有强芽期耐冷性(3级),而籼稻品种只有13.77%具有强芽期耐冷性(3级 ),粳稻品种的芽期耐冷性显著强于籼稻品种.无论籼稻,还是粳稻,贵州地方稻种的芽期耐冷性显著强于来自其他地区的品种,从贵州地方稻种中挖掘极强耐冷种质资源的潜力较大 .     

中国野生稻遗传资源的保护及其在育种中的利用

我国有三种野生稻,即普通野生稻(Oryza rufipogon)、药用野生稻(O.officinalis)和瘤粒野生稻(O.meyeriana)。这三种野生稻均被列为国家二级保护植物(渐危种)。调查结果表明,野生稻由于其自然群落大量丧失而濒危,濒危程度为普通野生稻>药用野生稻>瘤粒野生稻。造成濒危的主要原因是人为的破坏活动。人类的经济活动导致了野生稻生境丧失、生境质量不断恶化、栖息地越来越少;人类的活动也导致了外来种的入侵。目前,对野生稻的保护措施主要有就地保护(原地保护或原位保护)和迁地保护(易地保护或异位保护)。易地保护包括以种子保存的种质厍、以种茎保存的种质圃和以器官培养物作为材料的超低温保存。野生稻具有许多优良特性,如特强的耐寒性、高的抗病虫性、优质蛋白质含量高、功能叶片耐衰老的特异性、特强的再生性、良好的繁茂性及生长优势等等,这些优良特性已被广泛用于水稻常规育种和杂交育种中,并取得了巨大的社会效益和经济效益。有关野生稻生物技术方面的研究,如花药培养、原生质培养、体细胞杂交和基因工程等方面已取得了较大的进展。野生稻将在水稻育种中发挥越来越重要的作用。     

东北中部地区水稻不同生育时期低温处理下生理变化及耐冷性比较

摘要：研究水稻不同生育时期低温条件下各种生理指标的变化,选育耐低温水稻新品种,对于东北地区的水稻生产具有重要意义。以东北中部地区目前主要栽培的15个主要栽培水稻品种为实验材料,利用人工气候箱进行低温处理,分析苗期、孕穗期、抽穗期和灌浆期4个不同生育时期各个品种过氧化物酶（POD）、丙二醛（MDA）、脯氨酸和叶绿素4种生理指标含量变化与耐低温系数之间的关系。同时利用不同生理指标隶属函数的加权平均值（D值）对不同水稻品种的抗冷性进行分类划分。结果表明,每个生育时期的低温处理下,过氧化物酶（POD）、脯氨酸、叶绿素均呈下降趋势,丙二醛（MDA）则呈上升趋势,并且4种指标的变化幅度与水稻耐低温系数之间呈极显著相关性（P＜0.01）,各种指标的加权平均值（D值）与抗低温系数之间相关系数达到极显著,并且高于每一个单一指标。因此,D值可以更有效的对水稻进行抗低温评价和分级。     

Mapping of Quantitative Trait Loci Underlying Cold Tolerance in Rice Seedlings via High-Throughput Sequencing of Pooled Extremes

Low temperature is a major limiting factor in rice growth and development. Mapping of quantitative trait loci (QTLs) controlling cold tolerance is important for rice breeding. Recent studies have suggested that bulked segregant analysis (BSA) combined with next-generation sequencing (NGS) can be an efficient and cost-effective way for QTL mapping. In this study, we employed NGS-assisted BSA to map QTLs conferring cold tolerance at the seedling stage in rice. By deep sequencing of a pair of large DNA pools acquired from a very large F₃ population (10,800 individuals), we obtained ∼450,000 single nucleotide polymorphisms (SNPs) after strict screening. We employed two statistical methods for QTL analysis based on these SNPs, which yielded consistent results. Six QTLs were mapped on chromosomes 1, 2, 5, 8 and 10. The three most significant QTLs on chromosomes 1, 2 and 8 were validated by comparison with previous studies. Two QTLs on chromosomes 2 and 5 were also identified previously, but at the booting stage rather than the seedling stage, suggesting that some QTLs may function at different developmental stages, which would be useful for cold tolerance breeding in rice. Compared with previously reported QTL mapping studies for cold tolerance in rice based on the traditional approaches, the results of this study demonstrated the advantages of NGS-assisted BSA in both efficiency and statistical power.     

A point mutation in LTT1 enhances cold tolerance at the booting stage in rice

The cold tolerance of rice at the booting stage is a main factor determining sustainability and regional adaptability. However, relatively few cold tolerance genes have been identified that can be effectively used in breeding programmes. Here, we show that a point mutation in the low-temperature tolerance 1 (LTT1) gene improves cold tolerance by maintaining tapetum degradation and pollen development, by activation of systems that metabolize reactive oxygen species (ROS). Cold-induced ROS accumulation is therefore prevented in the anthers of the ltt1 mutants allowing correct development. In contrast, exposure to cold stress dramatically increases ROS accumulation in the wild type anthers, together with the expression of genes encoding proteins associated with programmed cell death and with the accelerated degradation of the tapetum that ultimately leads to pollen abortion. These results demonstrate that appropriate ROS management is critical for the cold tolerance of rice at the booting stage. Hence, the ltt1 mutation can significantly improve the seed setting ability of cold-sensitive rice varieties under low-temperature stress conditions, with little yield penalty under optimal temperature conditions. This study highlights the importance of a valuable genetic resource that may be applied in rice breeding programmes to enhance cold tolerance.     

Genetic and genomic approaches to develop rice germplasm for problem soils

Soils that contain toxic amounts of minerals or are deficient in essential plant nutrients are widespread globally and seriously constrain rice production. New methods are necessary to incorporate the complex adaptive traits associated with tolerance of these abiotic stresses, while simultaneously retaining the high yield potential of rice varieties when conditions are favorable. Significant progress in the genetic characterization of stress response pathways and recent advances in genomics have provided powerful tools for in-depth dissection of tolerance mechanisms. Additionally, tolerance of most of these abiotic stresses in rice is controlled by a few QTLs with large effects despite the intricacy of the numerous traits involved. Genetic dissection of these QTLs and their incorporation into high-yielding varieties will significantly enhance and stabilize rice productivity in these problem soils. Current efforts at IRRI and in rice breeding programs worldwide are seeking to explore diverse germplasm collections and genetically dissect the causal mechanisms of tolerance to facilitate their use in breeding. This review focuses on salinity and P and Zn deficiency as the major problems encountered in rice soils, and examines current understanding of the mechanisms involved and efforts toward germplasm improvement.     

低温对杂交水稻及其亲本三系始穗期旗叶光合作用的影响

研究了低温对5套杂交水稻组合的影响。始穗期旗叶光合作用的最大速率和表观量子效率受低温抑制的程度表明:其耐冷顺序为粳稻型的“秀优57”>“釉稻型的青优早”>“汕优63”、“汕优64”与“威优64”。杂交水稻 F_1的耐冷水平与母本近似,与父本关系不大,保持系的耐冷性相似于不育系。杂交水稻幼苗经低温处理后的存活率亦表现出同样的规律。证明所试5套杂交水稻的生育后期与苗期对低温的反应是一致的。本文对该结果在杂交水稻抗冷性选育种中的意义进行了讨论。     

Genomics-based precision breeding approaches to improve drought tolerance in rice

Rice (Oryza sativa L.), the major staple food crop of the world, faces a severe threat from widespread drought. The development of drought-tolerant rice varieties is considered a feasible option to counteract drought stress. The screening of rice germplasm under drought and its characterization at the morphological, genetic, and molecular levels revealed the existence of genetic variation for drought tolerance within the rice gene pool. The improvements made in managed drought screening and selection for grain yield under drought have significantly contributed to progress in drought breeding programs. The availability of rice genome sequence information, genome-wide molecular markers, and low-cost genotyping platforms now makes it possible to routinely apply marker-assisted breeding approaches to improve grain yield under drought. Grain yield QTLs with a large and consistent effect under drought have been indentified and successfully pyramided in popular rice mega-varieties. Various rice functional genomics resources, databases, tools, and recent advances in “-omics” are facilitating the characterization of genes and pathways involved in drought tolerance, providing the basis for candidate gene identification and allele mining. The transgenic approach is successful in generating drought tolerance in rice under controlled conditions, but field-level testing is necessary. Genomics-assisted drought breeding approaches hold great promise, but a well-planned integration with standardized phenotyping is highly essential to exploit their full potential.