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1.
鲤鱼cDNA-AFLP技术反应体系的建立   总被引:1,自引:0,他引:1  
将cDNA扩增片段长度多态性(cDNA-amplified fragment length polymorphism)技术应用在鲤鱼基因的转录表达研究中,本文通过对cDNA-AFLP主要步骤的优化和改进,建立起鲤鱼cDNA-AFLP反应体系.结果表明,采用MseⅠ和 BstYⅠ酶切鲤鱼cDNA 100 ng,分别处理2 h和3 h后,以接头浓度分别为2 pmol/μL和0.2 pmol/μL、T4连接酶浓度为0.12 U/μL的反应体系进行连接.以稀释50倍的预扩增产物为模板、BstYⅠ和MseⅠ比例为1:4的引物配比进行选择扩增可得到稳定的扩增结果.本研究建立的cDNA-AFLP技术将为鲤鱼转录组研究建立基础和技术支持.  相似文献   

2.
低盐缓冲液中盐缓冲液高盐缓冲液smal缓冲液 10mM 10mM lmM 10mM 50mM 10mM lmM100mM 50mM 10mM lmM 20mM 10mM 10口IM lmMTris一el(pH7 .5)MgCI:盛TTTr七一el(pH7.5)NaCIMgC】:D口fTNaCITr此一el(pH7.5)MgCI:八TTKCITr认cl(pHS.o)MgCI,奋TT。限制性内切酶反应缓冲液配制 ~~  相似文献   

3.
甘蔗双低频酶cDNA-AFLP体系的优化   总被引:2,自引:1,他引:1  
目的:建立一个适合于甘蔗(Saccharum officenarum)为研究材料的cDNA-AFLP反应的优化体系。方法:用Rever-tAidTM First Strandc DNA Synthesis Kit反转录获得第一链,用Rnase H、E.coliDNA聚合酶Ⅰ和E.coliDNA连接酶合成双链cDNA,用双低频酶EcoRⅠ和PstⅠ对dscDNA酶切,连接,预扩增,和选择性扩增的关键因素进行分析。结果:500ng的dscDNA双酶切5h,将16℃过夜连接的产物稀释1倍用作预扩增的模板,预扩增产物稀释50倍作为选择性扩增模板,6%聚丙烯酰胺凝胶检测及银染,扩增条带均匀分布,清晰可辨且主要分布在200~2000bp之间。结论:该体系具有稳定性高,重复性好等优点,可用于甘蔗cDNA-AFLP分析。  相似文献   

4.
以多倍体罗汉果DNA为材料,采用L16(4~5)正交组合试验和单因素梯度试验,研究Mg~(2+)、dNTP、引物、Taq DNA聚合酶、模板DNA浓度和退火温度、循环次数等对PCR扩增结果以及内切酶量、酶切时间对酶切反应的影响。结果表明,多倍体罗汉果RFLP最优PCR反应体系和扩增参数为:在25μL扩增反应体系中,10×Buffer 2.5μL,MgCl_2 1.5 mmol/L,dNTP 0.2 mmol/L,引物0.1μmol/L,Taq DNA聚合酶2.0 U,模板DNA 60 ng;退火温度为56℃,循环次数为35次。酶切反应体系:内切酶10×Buffer 2.0μL,内切酶5.0U,PCR产物15μL,超纯水补至20μL;酶切时间2 h。  相似文献   

5.
以芒DNA为材料,对AFLP分子标记分析中的基因组酶切体系选择性扩增中Mg2+、dNTP和Taq酶浓度等4个因素进行了比较。结果表明20μL基因组双酶切体系中,使用1UEcoRⅠ和1UM seⅠ酶切3 h能够实现完全酶切;选择性扩增的PCR 10μL反应体系中1.4 mmol.L-1Mg2+,0.4 mmol.L-1dNTP及0.6 U Taq酶是进行芒AFLP分析的最佳反应条件,能够得到丰富稳定的带纹。该体系的构建为AFLP技术在芒相关研究中的应用奠定了基础。  相似文献   

6.
鸡随机扩增多态性DNA最优化体系探讨   总被引:2,自引:0,他引:2  
以鸡基因组DNA为模板,对RAPD反应程序中一些重要参数进行摸索和优化实验,建立了随机扩增多态性DNA分析反应体系。即反应体积为25μl,Mg^2 浓度为3.0mM,dNTP浓度为0.1mM,模板DNA最为100mg,随机引物浓度为0.3μmol,Tap酶2.0单位;反应循环过程为92℃变性30s,36℃复性40s,72℃延伸1min,共40个循环。该体系可有效地应用于鸡遗传育种研究中,重复性好。  相似文献   

7.
本文报道了从615小鼠肝细胞核提取和分离A、B、C三种RNA聚合酶的方法。在80mM硫酸铵离子浓度下,B酶能选择性地吸附在DEAE-纤维素DE52上,从而和A、C酶分开,用500mM硫酸铵洗脱,呈现单一的峰。在50mM硫酸铵离子浓度下,将A、C酶吸附在DEAE-SephadexA25上,经50-500mM硫酸铵线性梯度洗脱,得到A酶和c酶两个峰。测定了这三种酶对α-鹅膏蕈碱的敏感性。A酶是抗α-鹅膏蕈碱的(在最高浓度为200微克/毫升时,酶活完全不受抑制);B酶在α-鹅膏蕈碱浓度为0.2微克/毫升时,活性受到50%以上的抑制;C酶在α-鹅膏蕈碱浓度为100微克/毫升时,活性受到50%以上的抑制。用提取的B酶免疫母鸡,获得了抗B酶的抗血清,这种抗血清在双向免疫扩散实验中和B酶之间产生沉淀反应,而和A酶或C酶之间不产生沉淀反应。  相似文献   

8.
短蛸AFLP分子标记分析体系的优化与建立   总被引:3,自引:0,他引:3  
本研究构建了短蛸扩增片段长度多态性(AFLP)分析体系,对DNA提取、双酶切反应、连接反应、预扩增反应、选择性扩增反应和银染等步骤进行了分析。得到了一种适于短蛸AFLP技术分析的优化体系,该体系中各优化因素为:模板DNA浓度为200 ng/μL;酶切体系中,MseI和EcoR I各加入5 units,缓冲液使用MseI buffer Tango,反应时间为3-4 h;连接最适反应时间为12 h;预扩增产物最适稀释倍数为20倍。该体系的构建为AFLP技术在短蛸分子遗传多样性研究中的应用奠定了基础。  相似文献   

9.
日本沼虾AFLP反应体系的建立   总被引:1,自引:1,他引:0  
目的:建立一个适于日本沼虾研究用的 AFLP 反应体系.方法:以日本沼虾 DNA 为材料,对基因组酶切时间、选择性扩增中Mg2 、dNTP浓度、预扩增产物稀释倍数及选扩性引物M 3/E 3配比等进行了比较分析.结果:酶切5h,选扩 25ul PCR 反应体系中Mg2 2mmol/L,dNTP 1.2rmnol/L,预扩产物稀释 40 倍,选扩引物M 3/E 3配比为8:1,所得产物在毛细管电泳中可得剑稳定的结果.结论:该体系的构建为 AFLP 技术在日本沼虾相关研究中的应用奠定了基础.  相似文献   

10.
目的:以高粱丝黑穗病2381(抗病)、矮四(感病)为材料,以优化SSR反应体系为 目的.方法:采用CTAB法提取高粱基因组总DNA,用SSR分子标记技术对其进行多态性扩增, 通过对体系中不同的Taq酶浓度、模板浓度、dNTP浓度和引物浓度的梯度分析. 结果:建立 并优化了的SSR-PCR反应体系为20ìl反应体系:dNTP浓度为200ìmol/L、Taq酶浓度为1.5U 、 DNA浓度为100ng和引物浓度为0.4ìmol/L.达到了较理想的扩增效果.用该体系对94对SSR 引 物进行了筛选,其中47对引物扩增出了多态性谱带,其中Xtxp3和Xtxp13在抗感的品种间扩 增出了差异谱带.结论:应用优化的SSR反应体系可以对高粱丝黑穗病基因进行分析.  相似文献   

11.
Chrysanthemum lavandulifolium (Fisch. ex Trautv.) Makino is a halophyte species that belongs to the Asteraceae family, and the genus Chrysanthemum. It is one of the ancestors of C. × morifolium Ramatella. Understanding the tolerance mechanism associated with salt stress in C. lavandulifolium could provide important information for explaining the salt tolerance of higher plants and could also help enhancing breeding programs of cultivated Chrysanthemum. In this study, cDNA amplified fragment length polymorphism (cDNA-AFLP) was used to detect differential gene expression in leaves of C. lavandulifolium in response to NaCl treatment. The determination of membrane permeablility, peroxidase activity (POD), malon-dialdehyde (MDA), as well as proline and leaf chlorophyll contents under different NaCl concentrations showed that a 200 mM NaCl treatment was an optimal condition for the cDNA-AFLP experiment. Using this concentration during different times (0, 3 h, 12 h, 24 h and 48 h), we obtained 1930 cDNA fragments using 64 primers. After sequencing 234 randomly chosen cDNA clones and BLASTx analyzing, we got 129 expressed sequence tags (ESTs) which had no significant homology with other sequences, 85 ESTs were homologous to genes with known functions, whereas the rest of ESTs showed homology to unclassified or putative proteins. 25 ESTs that were similar to known functional genes involved in several abiotic and biotic stresses were confirmed by semi-quantitative RT-PCR and qRT-PCR. The expression patterns of these salt-responsive genes not only responded to salt stress but also to plant hormones, such as abscisic acid (ABA), and to other abiotic stresses such as drought and cold. These results indicate an extensive cross-talk among several stresses. Our results provide interesting information for further understanding the molecular mechanisms of salt tolerance in C. lavandulifolium.  相似文献   

12.
利用光学显微镜对5种安徽野生菊属(Chrysanthemum)植物(野菊、甘菊、菊花脑、毛华菊和紫花野菊)的叶下表面特征进行研究,并探索与植物分布、生态的相关性.结果显示,这些类群非腺毛、腺毛的形态、大小和密度均有差异;气孔的大小和密度、表皮细胞的大小和角质纹理等方面也存在差异.叶片表面的特征与植物生长环境有相关性.依据这些特征讨论了菊花脑的分类并尝试性地编制了这些类群的检索表.  相似文献   

13.
14.
The Chrysanthemum indicum polyploid complex comprises morphologically differentiated diploids, tetraploids and hybrids between C. indicum and C. lavandulifolium. The relationships between species and cytotypes within this complex remain poorly understood. Random amplified polymorphic DNAs (RAPDs), intersimple sequence repeats (ISSRs) and chloroplast SSR markers were used to elucidate the genetic diversity and relationships of the C. indicum polyploid complex. Molecular analysis of three diploid and nine tetraploid populations provided strong evidence for recurrent origins and lineage recombination in the C. indicum polyploid complex. The high similarity in molecular marker profiles and cpDNA haplotypes between the diploids and tetraploids distributed in the Shen-Nong-Jia Mountain area of China suggested an autopolyploid origin of the tetraploids, while the tetraploids from other populations may have originated via allopolyploidization. Lineage recombination was revealed by the extensive sharing of chloroplast haplotypes and genetic markers among the tetraploid populations with different origins. Multiple differentiation and hybridization/polyploidization cycles have led to an evolutionary reticulation in the C. indicum polyploid complex, and resulted in the difficulties in systematic classification.  相似文献   

15.
We describe a simple and rapid method for determining the critical micelle concentration (CMC) of surfactants from fiber-optic measurements of refractive index. The refractive index of an aqueous surfactant solution was monitored as the surfactant concentration was increased using an automated dispensing system. On reaching the surfactant’s CMC value, an abrupt change was observed in the rate of increase of the refractive index with increasing concentration. The measurement system provides rapid semiautomatic data collection and analysis, increasing the precision, sensitivity, and range of applicability of the technique while substantially decreasing the amount of manual intervention required. Measurements of CMC for sodium dodecyl sulfate (8.10 mM), cetyltrimethylammonium chloride (1.58 mM), and Triton X-100 (0.21 mM) were in excellent agreement with values previously reported in the literature. The method is applicable to cationic, anionic, and nonionic surfactants, and it offers a facile, in situ, and sensitive means of detecting micelle formation over a broad range of CMC values larger than 10−1 mM.  相似文献   

16.
Plants were regenerated successfully through shoot organogenesis of a NaCl-selected callus line of Chrysanthemum morifolium Ramat. cv. Maghi Yellow (a salt sensitive cultivar), developed through stepwise increase in NaCl concentration (0-100mM) in the MS medium. The stepwise increase in NaCl concentration from a relatively low level to cytotoxic level was found to be a better way to isolate NaCl-tolerant callus line, since direct transfer of callus to high saline medium was detrimental to callus survival and growth. The selected callus line exhibited significant increase in superoxide dismutase (EC 1.15.1.1), ascorbate peroxidase (EC 1.11.1.11) and glutathione reductase (EC 1.6.4.2) activities compared to control callus (grown in medium devoid of NaCl). Stability of salt tolerance character of the selected callus line was checked by growing the calli in NaCl-free medium for 3 consecutive months followed by re-exposure to higher salinity stress (120mM NaCl). Among different growth regulator treatments, a combination of 5mgl(-1) TDZ (Thidiazuron) along with 0.25mgl(-1) NAA and 0.5mgl(-1) GA(3) was found to be the most effective for shoot organogenesis in selected callus line. The regeneration potential of the NaCl-tolerant callus ranged from 20.8% to 0% against 62.4% to 0% in control callus line. Under elevated stress condition (medium supplemented with 250mM NaCl), selected calli derived regenerants (S1 plants) exhibited significantly higher SOD and APX activities over both PC (positive control: control callus derived plants grown on MS medium devoid of NaCl) and NC (negative control: control callus derived plants subjected to 250mM NaCl stress) plants. In addition, the NC plants showed stunted growth, delayed root initiation, and had lesser number of roots as compared to S1 plants. Based on growth performance and antioxidant capacity, the S1 plants could be considered as NaCl-tolerant line showing all positive adaptive features towards the salinity stress. Further study on agronomic performance of these S1 plants under saline soil condition need to be undertaken to check the genetic stability of the induced salt-tolerance.  相似文献   

17.
18.
姜自红  殷培峰 《病毒学报》2021,37(1):169-180
菊花容易受到病毒感染而造成品质下降,目前国内对菊花病毒的检测主要根据外观表现或者定性PCR检测,无法准确判定病毒载量。为构建一种可同时用于检测菊花B病毒(Chrysanthemum virus B,CVB)、番茄不孕病毒(Tomato aspermy virus,TAV)和菊花褪绿斑驳类病毒(Chrysanthemum chloritic mottle viroid,CChMVd)的实时荧光定量RT-PCR检测方法,本研究分别以保守区域作为靶标设计相应的引物探针,通过优化扩增体系中CVB、TAV、CChMVd 3种病毒/类病毒探针浓度、引物浓度、Mg2+浓度、dNTPs浓度,摸索扩增程序中反转录时间、退火温度和扩增循环数,构建了一种可同时用于CVB、TAV、CChMVd的3重实时荧光定量RT-PCR检测体系,优化后的扩扩增体系中CVB、TAV和CChMVd的探针浓度分别为100 nmol/L、120 nmol/L和80 nmol/L,引物浓度分别为200 nmol/L、240 nmol/L和160 nmol/L,Mg2+浓度为3.0 mmol/L;dNTPs浓度200μmol/L;最适反转录时间为25 min,退火温度为60℃,循环数为40。敏感性实验结果表明,该反应体系对3种病毒/类病毒的敏感性为1.0×103拷贝/mL,敏感性好;定量线性范围为1.0×103拷贝/mL~1.0×1010拷贝/mL,线性范围宽;特异性好,对菊花矮化类病毒、烟草花叶病毒和黄瓜花叶病毒核酸检测结果为阴性;对1.0×104拷贝/mL的低浓度参考品平行检测10次,定量结果lg值偏差(CV%)为4.81%,重复性好。在南京农业大学"中国菊花种质资源保存中心"基地随机选择菊花20株进行本研究试剂检测,检出6例CVB病毒株和4例TAV病毒株,其病毒载量为2.5×104拷贝/mL~5.5×107拷贝/mL,随机选择1株CVB病毒株定量PCR,产物进行TA克隆后经测序与NCBI Blast比对,其与MH678704.1的同源性为100%。因此,本研究建立了一种能同时检测CVB、TAV、CChMVd 3种菊花常见病毒/类病毒的灵敏、快速、可定量的检测方法。  相似文献   

19.
目的研究菊花水煎液促进长双歧杆菌的体外增殖与活性的作用,初步探讨它作为一种双歧因子的条件。方法以菌液A600值、pH、活菌计数及发酵牛乳的凝乳时间、pH、滴定酸度等为指标,研究菊花水煎液对长双歧杆菌生长的影响,并用K—B琼脂法初步研究菊花水煎液对几种常见肠道菌群的抑/促菌作用。结果在5%添加菊花水煎液的培养基中长双歧杆菌的菌体浓度(A600值及活菌计数)均明显高于空白对照,菌液pH也均低于空白对照;长双歧杆菌发酵含有菊花水煎液的牛奶后,凝乳时间缩短,乳液的滴定酸度高于空白对照,pH也相应降低。菊花水煎液对几种常见肠道致病菌有较强的抑菌作用。结论菊花水煎液能促进长双歧杆菌的体外增殖与活性,且具有一定的选择性;菊花有可能成为一种良好的双歧因子或益生元制剂的候选物质。  相似文献   

20.
The unidirectional influx of hypoxanthine across cerebral capillaries, the anatomical locus of the blood=brain barrier, was measured with an in situ rat brain perfusion technique employing [3H]hypoxanthine. Hypoxanthine was transported across the blood-brain barrier by a saturable system with a one-half saturation concentration of approximately 0.4 mM. The permeability-surface area product was 3×10–4 sec–1 with a hypoxanthine concentration of 0.02 M in the perfusate. Adenine (4 mM) and uracil and theophylline (both 10 mM), but not inosine (10 mM) or leucine (1 mM), inhibited hypoxanthine transfer through the blood-brain barrier. Thus, hypoxanthine is transported through the blood-brain barrier by a high-capacity, saturable transport system with a half-saturation concentration about 100 times the plasma hypoxanthine concentration. Although involved in the transport hypoxanthine from blood into brain, this system is not powerful enough to transfer important quantities of hypoxanthine from blood into brain.  相似文献   

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