Human and livestock migrations: a history of bot fly biodiversity in the Mediterranean region

The bot fly (oestrid) is responsible for myiasis in domestic animals. The presence in some regions of southern Europe of an unusually large number of different species of bot fly suggests a high degree of oestrid biodiversity in this area. The many factors that can influence parasitic species composition (e.g. host and parasite genetics, relationships with their hosts and environment, and animal management) include the movement of domestic animals in association with migrating human populations in southern Europe over thousands of years. From its geographical position, which was strategically important in controlling commercial trade routes in early Western civilization, the Mediterranean sea has for more than 3000 years constituted the hub of many different cultures, populations, genes and agricultural practices. The movement of animals and their associated parasites in this region can help to explain the evolution of parasitic biodiversity.     

Analysis of patterns of bushmeat consumption reveals extensive exploitation of protected species in eastern Madagascar

Understanding the patterns of wild meat consumption from tropical forests is important for designing approaches to address this major threat to biodiversity and mitigate potential pathways for transmission of emerging diseases. Bushmeat consumption has been particularly poorly studied in Madagascar, one of the world's hottest biodiversity hotspots. Studying bushmeat consumption is challenging as many species are protected and researchers must consider the incentives faced by informants. Using interviews with 1154 households in 12 communes in eastern Madagascar, as well as local monitoring data, we investigated the importance of socio-economic variables, taste preference and traditional taboos on consumption of 50 wild and domestic species. The majority of meals contain no animal protein. However, respondents consume a wide range of wild species and 95% of respondents have eaten at least one protected species (and nearly 45% have eaten more than 10). The rural/urban divide and wealth are important predictors of bushmeat consumption, but the magnitude and direction of the effect varies between species. Bushmeat species are not preferred and are considered inferior to fish and domestic animals. Taboos have provided protection to some species, particularly the Endangered Indri, but we present evidence that this taboo is rapidly eroding. By considering a variety of potential influences on consumption in a single study we have improved understanding of who is eating bushmeat and why. Evidence that bushmeat species are not generally preferred meats suggest that projects which increase the availability of domestic meat and fish may have success at reducing demand. We also suggest that enforcement of existing wildlife and firearm laws should be a priority, particularly in areas undergoing rapid social change. The issue of hunting as an important threat to biodiversity in Madagascar is only now being fully recognised. Urgent action is required to ensure that heavily hunted species are adequately protected.     

Cryptic biodiversity and phylogenetic relationships revealed by DNA barcoding of Oriental black flies in the subgenus Gomphostilbia (Diptera: Simuliidae)

Understanding the medical, economic, and ecological importance of black flies relies on correct identification of species. However, traditional taxonomy of black flies is impeded by a high degree of morphological uniformity, especially the presence of cryptic biodiversity, historically recognized by details of chromosomal banding patterns. We assess the utility of DNA barcoding, based on cytochrome c oxidase subunit 1 (COI) sequences, for identifying 13 species of Oriental black flies in the subgenus Gomphostilbia. Samples of larvae fixed in Carnoy's solution were used to gather molecular and chromosomal data from the same individual. We found that larvae refrigerated in Carnoy's fixative for as long as 11 years can be used for DNA study. Levels of intraspecific genetic divergence, based on the Kimura-2 parameter, range from 0% to 9.28%, with a mean of 2.75%, whereas interspecific genetic divergence ranges from 0.34% to 16.05%. Values of intraspecific and interspecific genetic divergence overlap in seven species owing to incomplete lineage sorting and imperfect taxonomy, implying that DNA barcoding to identify these species will be ambiguous. Despite a low level of success, we found that DNA barcoding is useful in revealing cryptic biodiversity, potentially facilitating traditional taxonomy. Phylogenetic analyses indicate that species groups currently recognized on morphological criteria are not monophyletic, suggesting a need to reevaluate the classification of the subgenus Gomphostilbia.     

Discovering and developing primary biodiversity data from social networking sites: A novel approach

Detailed, authoritative Digital Accessible Knowledge (DAK) about biodiversity is crucial to any biodiversity informatics or conservation project. In most developing nations, significant DAK gaps exist both geographically and taxonomically. This paper explores a novel source of photo-vouchered biodiversity occurrence data, in the form of records associated with photos posted on social networking sites (SNSs). SNSs like Flickr, Facebook, and Picasaweb allow naturalists to share images and associated metadata with other users. I explore the idea of discovering and organizing massive numbers of biodiversity occurrence records now available on SNSs. I present a proof-of-concept with Flickr as the SNS and the Snowy Owl (Bubo scandiacus) and the Monarch Butterfly (Danaus plexippus) as target species, but methods presented here can easily be used for any other SNS, region, or species group, particularly for developing, mega-diverse countries where the need for biodiversity DAK is particularly acute. These approaches are broadly applicable to animal and plant groups that are photographed and that can be identified from photographs with some degree of confidence (e.g., birds, butterflies, cetaceans, orchids, dragonflies, amphibians, plants), and thus offer a rich new source of biodiversity data.     

广州外来入侵植物

根据野外调查及相关文献资料,初步探讨了广州市外来入侵植物的种类组成、分布生境、生长特性、危害以及来源.结果表明:广州市现有外来人侵植物73种,隶属于27科59属,其中菊科(19种)、禾本科(8种)、豆科(7种)和苋科(7种)植物占了入侵植物总种数的56.2%.生活型分析发现,在广州有分布的外来入侵植物中,陆生草本植物最多(58种),其次为灌木(10种)、水生草本(3种),乔木种类最少(2种),它们主要生长在人类干扰比较频繁的低海拔地区.另外,基于对外来入侵植物目前在野外的生长和分布状况等生态学特性进行分析,可大致将它们对本地生物多样性危害程度分为3级,其中危害严重的有11种,危害中等的有25种,危害较轻的有37种.从原产地分析来看,61种来自于热带美洲地区,占广州外来入侵植物总种数的83.6%.与国内其他地区外来入侵植物进行比较发现,广州和广西共有种数最多,有62种,然而,对已经造成严重危害的外来植物种类,在数量上广州与香港、深圳和广西相同种类较多,分别有8种、7种和6种.对广州市目前外来植物的入侵风险(潜在威胁)的评估结果表明,对一些在其它地区已经造成严重危害的外来植物,应当加强监控,防止入侵扩散并造成重大生态灾难.还对广州市外来植物入侵的主要途径及防治策略做了简要分析和说明.     

A novel approach to assess livestock management effects on biodiversity of drylands

In drylands livestock grazing is the main production activity, but overgrazing due to mismanagement is a major cause of biodiversity loss. Continuous grazing around water sources generates a radial gradient of grazing intensity called the piosphere. The ecological sustainability of this system is questionable and alternative management needs to be evaluated. We apply simple indicators of species response to grazing gradients, and we propose a novel methodological approach to compare community response to grazing gradients (double reciprocal analysis). We assessed degradation gradients of biodiversity under different management strategies in semiarid rangelands of the Monte desert (Argentina) by analyzing changes in vegetation, ants and small mammal richness and diversity, and variation due to seasonality. At the species level, we determined the trend in abundance of each species along the gradient, and the potential cross-taxa surrogacy. At the community level, the new methodological consists of assessing the magnitude of biodiversity degradation along different piospheres by comparing the slopes of linear functions obtained by the double reciprocal analysis. We found that most species showed a decreasing trend along the gradient under continuous grazing; while under rotational grazing fewer species showed a decreasing trend, and a neutral trend (no change in the abundance along the gradient of grazing intensity) was the most common. We found that vegetation cannot be used as a surrogacy taxon of animal response. Moreover, weak cross-taxa surrogacy was found only for animal assemblages during the wet season. The double reciprocal analysis allowed for comparison of multi-taxa response under different seasons and management types. By its application, we found that constrains in precipitation interacted with disturbance by increasing the negative effect of grazing on vegetation, but not on animal assemblages. Continuous grazing causes biodiversity loss in all situations. Rotational grazing prevents the occurrence of vegetation degradation and maintains higher levels of animal diversity, acting as an opportunity for biodiversity conservation under current scenarios of land use extensification. Our approach highlights the importance of considering multi-taxa and intrinsic variability in the analysis, and should be of value to managers concerned with biodiversity conservation.     

Impacts of traditional land uses on biodiversity outside conservation areas: effects on dung beetle communities of Vaalbos National Park

Grazing is one of the key processes in terrestrial ecosystems and this can be provided by both indigenous and domestic ungulates. However, a question remains whether or not traditional forms of land use such as the grazing of domestic animals support the maintenance of biodiversity. If it does not, then the second question becomes to what extent does grazing of domestic animals alter the systems and processes that support biodiversity? This study demonstrates that in attempting to answer this question, small organisms like dung beetles are ideal indicators that can be used to express significant differences between conserved (indigenous) and non‐conserved (domestic) land. As a general trend, studies that investigated these differences displayed differences through analysis of the diversity indices. This method has in most cases demonstrated a lack of contrast between conserved and non‐conserved land. In the existence of such uncertainty this study has demonstrated that in such cases, where the analysis of biodiversity indices fail to demonstrate significant differences a closer examination of actual species such as guilds and functional groups could confirm significant differences between conserved and non‐conserved land. These apparently conflicting findings reflect the need to consider the actual elements of biodiversity (e.g. species) when assessing conservation issues rather than just the statistical measures of biodiversity.     

川西亚高山针叶林土壤动物群落对模拟林下植物丧失的响应

受研究手段的限制,有关森林物种组成对土壤动物群落影响的研究少有报道。采用人工除灌和除草的林地控制实验方法,研究了亚高山人工林灌草层关键物种丧失对土壤动物群落结构的影响。结果表明:(1)灌木层去除后土壤动物密度极显著低于对照(P0.01);线虫纲(Nematoda)优势度持续增加,处理15个月时极显著高于对照(P0.01);土壤动物群落多样性指数极显著低于对照(P0.01);腐食性功能团类群数及个体数百分比有所下降。(2)草本层去除后土壤动物密度显著低于对照(P0.05);线虫纲优势度持续增加,处理15个月时显著高于对照(P0.05);土壤动物群落多样性指数极显著低于对照(P0.01);腐食性功能团类群数略低于对照,个体数百分比无显著差异。综上所述,林下灌草层去除,尤其是灌木层去除,导致土壤动物群落个体数量、多样性指数降低,优势类群格局、腐食性功能团构成发生变化,从而在一定程度上影响到森林生态系统的物质循环功能。     

Biodiversity hotspots: hot for what?

In complex areas of international policy, such as biodiversity conservation, there is a risk that well-promoted strategies will be received by decision makers as a cure-all. The U.S.-based Conservation International is promoting biodiversity hotspots as a 'silver bullet' strategy for conserving most species for least cost. We assess the degree to which this goal is compatible with four social values that characterize the conservation movement. We find that biodiversity hotspots provide only a partial response because conservation does not treat all species as equal. We argue that explicit recognition of such values is fundamental to a structured debate contributing to the development of a common strategy for biodiversity conservation.     

Evaluating the impacts of wood production and trade on bird extinction risks

Biodiversity loss can be accelerated by human consumption in regions that are far removed from habitat degradation because of economic globalization, but no study has directly quantified the effects of global trade on extinction risks at a global scale with consideration for species differences. We propose a novel biodiversity footprint index based on bird extinction risks to evaluate the effects of global wood production and trade on biodiversity. Using 536 endangered bird species threatened by wood harvesting and logging, we calculated the “quasi-extinction” probabilities, that is, the probabilities that population sizes become lower than an extinction threshold after habitat loss based on initial population sizes and forest habitat loss rates. We then used bilateral wood trade data to link the biodiversity impacts in wood exporters to wood importers. We found that if recent trends in forest cover loss continue until 2100, bird species in Brazil would be the most rapidly and heavily affected by wood production and trade, followed by those in Indonesia; these two countries alone would account for about half of all global bird extinctions. Large-scale wood importers (i.e., China, Japan, and the United States) significantly elevate overseas extinction risks and, simultaneously, reduce domestic impacts, indicating a heavy responsibility of these countries for global biodiversity loss. We also conducted a scenario analysis, which showed that the total projected number of extinct species would not decrease if each country produced the amount of wood materials necessary to meet current consumption levels. This is because bird extinction risks in tropical wood importers, such as Mexico and the Philippines, as well as Japan and China will increase if these countries increase domestic wood production. Our biodiversity footprint index is useful to identify countries whose bird species are highly affected by wood production and trade, and to quantify the role of wood trade in bird species extinctions. Additional scenario analyses are needed to establish effective patterns of wood production and consumption for bird biodiversity conservation.     

我国东北三省自然保护区物种保护价值评估

自然保护区作为保护生物多样性最主要的手段之一,得到了世界各国的重视。如何科学客观地评价自然保护区的保护价值,并依据保护价值对其进行分类管理是当前我国自然保护区建设与管理的重要课题之一。以我国东北地区40个国家级自然保护区为研究对象,分别对其物种多样性保护价值和遗传种质资源保护价值进行了评估。通过选取物种的濒危性、特有性和保护等级等指标来计算野生动植物的多样性保护价值;选取分类独特性、近缘程度和濒危性等指标来计算遗传种质资源保护价值,进而计算出各自然保护区的综合物种保护价值。研究结果显示:该评价方法能够很好的反映自然保护区生物多样性及其各个层次和类群的保护价值,能够较准确地识别其物种保护优先性。不同自然保护区其保护价值存在一定差异;同一自然保护区中野生动物与植物之间的物种多样性保护价值没有显著差异,但其野生动物与植物之间的遗传种质资源保护价值存在一定差异性;绝大多数自然保护区其植物遗传种质资源保护价值大于动物遗传种质资源保护价值;虽同为国家级自然保护区,其综合物种多样性保护价值差异很大。吉林长白山国家级自然保护区、吉林珲春东北虎国家级自然保护区、吉林松花江三湖国家级自然保护区的综合保护价值显著高于同类型的其他自然保护区,而辽宁章古台国家级自然保护区、黑龙江双河国家级自然保护区和黑龙江三环泡国家级自然保护区的综合物种保护价值较低,不同类型自然保护区之间其综合保护价值则没有明显差异。该评价方法能较好地进行自然保护区物种保护价值评价,并用于进行自然保护区之间的比较,并不会因自然保护区所处生境、所分布物种不同而产生评价结果上的偏差;该方法在对自然保护区遗传种质资源部分的计算方面需要进一步完善;总体上来说该评价方法不会因自然保护区类型的不同产生差异;今后在对东北地区自然保护区管理分类研究中可将此评价结果作为参考,并作为评价该地区自然保护区能否晋升为国家级自然保护区的辅助工具。这在一定程度上减少了人为主观性,具有较大可行性。     

栖息地片断化对动物种群间基因流的影响及其测定方法

栖息地片断化指在人为活动和自然干扰下,大面积连续分布的自然栖息地被其它非适宜栖息地分隔成许多面积较小的斑块(岛屿)的过程。栖息地片断化是导致生物多样性丧失和物种绝灭的主要因素,也是威胁自然界生物生存的重要因素之一。栖息地片断化将影响基因在种群间和种群内的运动(基因流),开展栖息地片断化研究对保持物种间遗传多样性具有重要意义。本文介绍了片断化程度和基因流的测定方法。回顾了国内外的研究现状,并探讨了片断化对种群间基因流的影响和对濒危物种保护的意义。     

Adjacent woodlands rather than habitat connectivity influence grassland plant,carabid and bird assemblages in farmland landscapes

One response to biodiversity decline is the definition of ecological networks that extend beyond protected areas and promote connectivity in human-dominated landscapes. In farmland, landscape ecological research has focused more on wooded than open habitat networks. In our study, we assessed the influence of permanent grassland connectivity, described by grassland amount and spatial configuration, on grassland biodiversity. We selected permanent grasslands in livestock farming areas of north-western France, which were sampled for plants, carabids and birds. At two spatial scales we tested the effects of amount and configuration of grasslands, wooded habitats and crops on richness and abundance of total assemblages and species ecological groups. Grassland connectivity had no significant effects on total richness or abundance of any taxonomic group, regardless of habitat affinity or dispersal ability. The amount of wooded habitat and length of wooded edges at the 200 m scale positively influenced forest and generalist animal groups as well as grassland plant species, in particular animal-dispersed species. However, for animal groups such as open habitat carabids or farmland bird specialists, the same wooded habitats negatively influenced richness and abundance at the 500 m scale. The scale and direction of biodiversity responses to landscape context were therefore similar among taxonomic groups, but opposite for habitat affinity groups. We conclude that while grassland connectivity is unlikely to contribute positively to biodiversity, increasing or maintaining wooded elements near grasslands would be a worthwhile conservation goal. However, the requirements of open farmland animal species groups must be considered, for which such action may be deleterious.     

Antimicrobial Activity of Essential Oils Against the Fungal Pathogens <Emphasis Type="Italic">Ascosphaera apis</Emphasis> and <Emphasis Type="Italic">Pseudogymnoascus destructans</Emphasis>

Fungal pathogens are a growing worldwide concern. Declines in a number of economically and agriculturally important plant and animal species pose a significant threat to both biodiversity and food security. Although many effective antifungal agents have been identified, their toxicity often precludes their use with food products or sensitive animal species. This has prompted the exploration of natural products as effective treatment compounds. In the present study, several essential oils were tested for their capacity to limit the growth of the fungal pathogens Ascosphaera apis and Pseudogymnoascus destructans, the causative agents of chalkbrood disease among honey bee larvae and white-nose syndrome among bats, respectively. Essential oils of cinnamon bark, citronella, lemongrass, and orange were exposed to A. apis in contact-dependent oil-agar suspensions as well as in contact-independent shared airspaces. Essential oils of cinnamon bark, citronella, and lemongrass were exposed to P. destructans in contact-dependent oil-agar suspensions. All compounds were found to significantly inhibit mycelial growth at low concentrations, suggesting the potential for these natural products to be used for controlling these and other select fungal pathogens.     

淮南市重金属污染对土壤动物群落和多样性影响研究

通过对淮南煤矿和发电厂及灰场污染地的土壤动物群落结构进行分析。结果表明,土壤动物群落的组成与数量随着污染的加重而减少,土壤动物的密度也有同样的变化趋势;在重污染土壤中,优势类群与常见类群的种类明显减少。随着污染的加重使土壤动物的种类和数量逐渐减少。重金属污染对土壤动物群落结构的影响是随着污染的加重,多样性指数、均匀性指数、密度类群指数都有减少的趋势,优势度指数在灰场外围是先增加后减少。在群落指标的相关性中,多样性指数和均匀性指数呈密切正相关,多样性指数与优势性指数呈负相关,有机质含量与土壤动物个体数量关系不密切。     

Conservation evaluation and the choice of faunal taxa to sample

Since the coining of the term, biodiversity has come to be understood as being more than a synonym for species richness. It also embraces a diversity of lifestyles, so that of two samples with the same number of species one that solely comprises a diversity of herbivores is considered to be less biodiverse than one that includes detritivores, predators, parasitoids, parasites, etc. as well. It seems that Phoridae could be a prime candidate for use in conservation evaluation exercises because the larvae of this family exhibit a greater range of habits than any other family of animals on the planet.     

Stage structure alters how complexity affects stability of ecological networks

Resolving how complexity affects stability of natural communities is of key importance for predicting the consequences of biodiversity loss. Central to previous stability analysis has been the assumption that the resources of a consumer are substitutable. However, during their development, most species change diets; for instance, adults often use different resources than larvae or juveniles. Here, we show that such ontogenetic niche shifts are common in real ecological networks and that consideration of these shifts can alter which species are predicted to be at risk of extinction. Furthermore, niche shifts reduce and can even reverse the otherwise stabilizing effect of complexity. This pattern arises because species with several specialized life stages appear to be generalists at the species level but act as sequential specialists that are hypersensitive to resource loss. These results suggest that natural communities are more vulnerable to biodiversity loss than indicated by previous analyses.     

Absence of Obvious Short Term Impact of the Nematode-Trapping Fungus Duddingtonia Flagrans on Survival and Growth of the Earthworm Aporrectodea Longa

The nematode-trapping fungus Duddingtonia flagrans may be used in biological control of parasitic nematode larvae in faeces of domestic host animals after feeding the hosts with fungal chlamydospores. In this experiment a possible undesirable fungal impact on earthworms, of the species Aporrectodea longa, was investigated. As earthworms eat animal faeces, D. flagrans may come into contact with earthworms both in their alimentary tract and on their body surface. However during the experimental period of 20 days, when earthworms were living in soil and eating cattle faeces that were heavily infested with viable chlamydospores of D. flagrans there were no indications of internal or external mycosis among the earthworms.     

乡村景观生物多样性研究进展

乡村景观是一种人文和自然共生的复合生态系统, 为生物多样性的维持提供了支持。目前, 中国传统乡村地区生物多样性的维持正面临着农业集约化、人工林树种单一化、非农业用地急剧扩张及生态传承机制解体等复杂多样的威胁, 亟待展开深入研究。本文在总结乡村景观生物多样性相关概念及特征的基础上, 通过文献分析概括了国际乡村景观生物多样性的热点研究方向, 包括农业集约化下的生物多样性管理、区域尺度乡村景观与生物多样性的协同关系、局地尺度不同乡村景观类型的物种多样性及乡村景观中的生物文化多样性, 进一步梳理了国内在相关研究方向上的主要进展并指出研究不足。在此基础上提出未来研究展望, 包括突出生物文化多样性特征、加强多时空尺度分析、深化动态维持机制研究、推进生物多样性研究在乡村生态景观规划中的全过程应用等建议。     

The influence of sampling intensity on the perception of the spatial distribution of tropical diversity and endemism: a case study of ferns from Bolivia

The distribution of tropical plant and animal diversity is still poorly documented, especially at spatial resolutions of practical use for conservation. In the present study, we evaluated the level to which geographical incomplete data availability of species occurrence affects the perception of biodiversity patterns (species richness and endemism) among pteridophytes in Bolivia. We used a data base of Bolivian pteridophytes (27,501 records), divided it into three time periods (1900–70, up to 1990 and up to 2006), and created grid-files at 15'-resolution for species richness and endemism. For each of these biodiversity properties we estimated the species richness (Chao 2) and the index of sampling completeness (C index) per grid, and then all these variables at both species richness and endemism were correlated. Patterns of richness were fairly consistent along all periods; the richest areas were placed along the humid-montane forest, even though they were strongly influenced by collecting intensity. Endemism had a lower degree of correlation with collecting intensity, but varied much more strongly through time than species richness. According to the C index, which gives the ratio between estimated (by Chao 2) and recorded values of species richness and endemism, both biodiversity properties tended to be undersampled in the richest grid cells. Inter-temporal correlations showed sharper differences of correlations for endemism than species richness. Consequently, already in 1970, botanists had a correct idea of the spatial distribution of pteridophyte richness in Bolivia (even though the magnitude was grossly underestimated). In contrast, patterns of endemism, which are of high conservation importance, may not even today be reliably known.