The bioassessment of fish and macroinvertebrates in a Mediterranean–Atlantic climate: Habitat assessment and concordance between contrasting ecological samples

Human intervention and drought conditions in Mediterranean rivers may necessitate the collection of organisms from a different habitat type to that specified by the original bioassessment protocol; it is therefore critical to understand the consequences of adaptive sampling strategies in these lotic systems. In a survey of 31 streams (2nd–4th order) in northern Portugal we collected separate macroinvertebrate samples from running-water and standing-water habitats and fish samples from a delineated reach, inclusive of all habitat types. In addition to collecting habitat data specific to macroinvertebrates and fish we conducted a generalized River Habitat Survey (RHS) and derived scores designed to report habitat quality and habitat degradation. Ecological data were described in terms of taxonomic structure, functional organization and by biotic indices and interpreted in relation to habitat data, comparing samples within and between sites for concordance. Macroinvertebrates from respective habitats differed in their relationship with habitat variable with running-water samples more strongly related to substrate and water quality and standing-water samples more strongly reflecting habitat characteristics at the reach scale. Running- and standing-water samples from the same-site varied widely, indicating that substituting standing-water for running-water samples in macroinvertebrate-based bioassessment carries a high risk of misclassification. However, a consistent bias in index scores suggests that a habitat-adjusted interpretation of biotic indices could be employed to improve measurement precision. Variation in key parameters of the fish community corresponded to changes in water quality and habitat structure and to reach-scale features recorded by the RHS. Trends between macroinvertebrate and fish measurements indicated common patterns for oxygen/flow sensitive taxa and for trophic organization that were related to similar habitat preferences. Whilst macroinvertebrates demonstrated no relationship with derived scores of habitat quality, the fish-based Index of well-being (Iwb) was strongly related to the Habitat Modification Score. Overall these data indicate how different ecological samples can be used to focus on different aspects of habitat quality and are suggestive of strategies for both the collection and interpretation of ecological data that would improve assessment performance. This study emphasizes the need to adapt assessment methods not only to the species pool but also to the differences in the managed and natural habitat characteristics of these types of Mediterranean streams.     

Contrasting community assembly processes structure lotic bacteria metacommunities along the river continuum

The heterogeneous nature of lotic habitats plays an important role in the complex ecological and evolutionary processes that structure the microbial communities within them. Due to such complexity, our understanding of lotic microbial ecology still lacks conceptual frameworks for the ecological processes that shape these communities. We explored how bacterial community composition and underlying ecological assembly processes differ between lotic habitats by examining community composition and inferring community assembly processes across four major habitat types (free-living, particle-associated, biofilm on benthic stones and rocks, and sediment). This was conducted at 12 river sites from headwater streams to the main river in the River Thames, UK. Our results indicate that there are distinct differences in the bacterial communities between four major habitat types, with contrasting ecological processes shaping their community assembly processes. While the mobile free-living and particle-associated communities were consistently less diverse than the fixed sediment and biofilm communities, the latter two communities displayed higher homogeneity across the sampling sites. This indicates that the relative influence of deterministic environmental filtering is elevated in sediment and biofilm communities compared with free-living and particle-associated communities, where stochastic processes play a larger role.     

Patterns of ecological diversity in fossil and modern mammalian faunas

Ecological diversity provides a means of analysing the community structure of fossil mammalian faunas in order to obtain information on the habitat of the fauna. As a basis for the analysis, 23 modern mammalian communities from distinct habitats have been used to establish patterns of community structure for tropical African habitats according to their species diversity by taxonomic group, size, locomotor zonal adaptation, and feeding adaptation. All the communities tested were in tropical Africa, but additional analyses on tropical forest communities in Australia, Malaya, and Panama have shown that these communities, which all have completely different species composition, nevertheless have community structures very similar to each other and to those of the African forest communities.     

长江口潮沟大型底栖动物群落的初步研究

通过对长江口崇明东滩潮沟系统与大型底栖无脊椎动物进行取样调查 ,研究了潮沟不同生境的底栖动物群落及其多样性 ,分析了潮沟生境异质性与底栖动物群落的关系。研究发现 :①潮沟剖面中出现明显的动物群落分带现象 ,从潮沟底、潮沟边滩到草滩 ,底栖动物种类、生活型组成和生活类群比例反映了河口潮滩潮沟底栖动物生态系列 ;②密度和生物量的分布皆为潮沟边滩 >草滩 >潮沟底 ,但密度与生物量的面上群 /面下群值格局却有不同 ,说明了密度和生物量的优势生活型和生活类群随潮沟生境的差异而变化 ;③潮沟系统 3种生境的多样性指数D ,H′和J值均为草滩 >潮沟边滩 >潮沟底 ,是潮沟系统生境结构分化的结果。潮沟底和潮沟边滩等特殊生境的存在 ,提高了淤泥质河口潮滩的生境异质性 ,说明了潮沟系统在维持河口生态系统底栖动物物种多样性中的重要作用。     

Rareness starts early for disturbance-dependent grassland plant species

Ecological communities always contain a few common species and an abundance of uncommon species. Given that most plant mortality occurs in seeds and seedlings, recruitment success often predicts plant community assemblage and patterning, but observational patterns do not reveal whether plant populations are seed or habitat limited. Grassland plant species make up a sizable portion of the overall native flora in northeastern North America (N.A.), but approximately 30 % of the area’s threatened and endangered flora are grassland species, possibly leftovers from the post-glacial landscape. Yet, close relatives of many rare grassland species thrive in the same range. We investigated whether seed or habitat limitation explained rarity and commonness in remnant grassland species. We used seed addition experiments coupled with microhabitat manipulations (burning and herbivore exclusion) in three different habitat types to evaluate recruitment (germination and seedling survival) limitation for three rare and three common grassland species. Rare grassland species successfully recruited where burning reduced initial competitor density, but seedling survival suggested they were severely limited by interspecific competition. Both the rare and common plant species survived equally well in forest habitats where herbaceous density was low whereas neither survived in the edge habitats. Only the common plants thrived in the high-competition meadow habitat, further suggesting that the rare grassland species are poor competitors. Commonness and rarity are temporal designations that can change as disturbance alters the landscape. Glacial retreat and low precipitation in northeastern N.A. created a landscape suitable for poor competitors that tolerated poor conditions. Our results suggest that rare remnant grassland plants, unlike their close relatives, display more biotic than abiotic limitation as they do not compete well with other plants. These results suggest that suitable habitat is not a spatial location but a temporally transient assemblage of species requirements.     

Implications of the spatial variability of macroinvertebrate communities for monitoring of ephemeral lakes. An example from turloughs

Turloughs, ephemeral water bodies associated with karstified limestone, are an important habitat found in the West of Ireland. They are a priority habitat under the European Habitats Directive (92/43/EEC) and are groundwater-dependent habitats under the European Water Framework Directive (2000/60/EC; WFD). Sampling to meet the objectives of either Directive requires discrimination of inherent natural variation from anthropogenically induced disturbances and accounting for both spatial and seasonal patterns of biotic distribution. This study reports within- (submerged grassland) and between-habitat (submerged and emergent grassland) variability of macroinvertebrate communities in six turloughs. Two different habitat types were sampled from two turloughs in April 2007, and further assessment of spatial pattern in commonly found submerged grassland habitat was determined from four additional turloughs in spring 2008. While cluster analysis and non-metric multidimensional scaling identified differences in macroinvertebrate community structures between habitats in one out of two turloughs, congruence of invertebrate communities was, nevertheless, greater within than among turloughs. Within-habitat variability of macroinvertebrate communities across sampling locations of submerged grassland habitat was sufficiently low so that samples collected at any location of a turlough can provide a reliable metric of the macroinvertebrate community of a turlough as a whole. A standardized submerged grassland sampling approach for routine turlough sampling is recommended as a pressure response method to fulfil the requirements of the WFD. For a comprehensive conservation assessment, however, as demanded under the EC Habitats Directive, we suggest a multi-habitat sampling approach to obtain a thorough assessment of turlough macroinvertebrate biodiversity.     

Convergence of fish communities from the littoral zone of reservoirs

1. Understanding factors that regulate the assembly of communities is a main focus of ecology. Human‐engineered habitats, such as reservoirs, may provide insight into these assembly processes because they represent novel habitats that are subjected to colonization by fishes from the surrounding river basin or transported by humans. By contrasting community similarity within and among reservoirs from different drainage basins to nearby stream communities, we can test the relative constraints of reservoir habitats and regional species pools in determining species composition of reservoirs. 2. We used a large spatial database that included intensive collections from 143 stream and 28 reservoir sites within three major river basins in the Great Plains, U.S.A., to compare patterns of species diversity and community structure between streams and reservoirs and to characterize variation in fish community structure within and among major drainage basins. We expected reservoir fish faunas to reflect the regional species pool, but would be more homogeneous that stream communities because similar species are stocked and thrive in reservoirs (e.g. planktivores and piscivores), and they lack obligate stream organisms that are not shared among regional species pools. 3. We found that fish communities from reservoirs were a subset of fishes collected from streams and dominant taxa had ecological traits that would be favoured in lentic environments. Although there were regional differences in reservoir fish communities, species richness, patterns of rank abundance and community structure in reservoir communities were more homogonous across three major drainage basins than for stream communities. 4. The general pattern of convergence of reservoir fish community structure suggests their assembly is constrained by local factors such as habitat and biotic interactions, and facilitated by the introduction of species among basins. Because there is a reciprocal transfer of biota between reservoirs and streams, understanding factors structuring both habitats is necessary to evaluate the long‐term dynamics of impounded river networks.     

Metacommunities of spiders in grassland habitat fragments of an agricultural landscape

Arthropod communities in fragmented agricultural landscapes depend on local processes and the interactions between communities in the habitat islands. We aimed to study metacommunity structure of spiders, a group that is known for high dispersal power, local niche partitioning and for engaging in species interactions. While living in fragmented habitats could lead to nestedness, other ecological traits of spiders might equally lead to patterns dominated either by species interactions or habitat filtering. We asked, which community pattern will prevail in a typical agricultural landscape with isolated patches of semi-natural habitats. Such a situation was studied by sampling spiders in 28 grassland locations in a Hungarian agricultural landscape. We used the elements of metacommunity structure (EMS) framework to distinguish between alternative patterns that reveal community organization. The EMS analysis indicated coherent species ranges, high turnover and boundary clumping, suggesting Clementsian community organization. The greatest variation in species composition was explained by local habitat characteristics, indicating habitat filtering. The influence of dispersal could be detected by the significant effect of landscape composition, which was strongest at 500 m. We conclude that dispersal allows spiders to respond coherently to the environment, creating similar communities in similar habitats. Consistent habitat differences, such as species rich versus species poor vegetation, lead to recognisably different, recurrent communities. These characteristics make spiders a predictable and diverse source of natural enemies in agricultural landscapes. Sensitivity to habitat composition at medium distances warns us that landscape homogenization may alter these metacommunity processes.     

Changhsingian brachiopod communities along a marine depth gradient in South China and their ecological significance in the end-Permian mass extinction

Diversity indices (dominance and evenness) and ecological spatial structure (lifestyles and relative abundances) are important features of Changhsingian brachiopod communities prior to the end-Permian mass extinction (EPME) and could predict temporal and spatial extinction patterns during the EPME. In South China, Changhsingian brachiopod communities show higher diversity than other contemporaneous brachiopod communities in the world and have been reported from a variety of sedimentary environments. In this paper, brachiopods from 18 sections in South China were selected to divide communities and compare their ecological structure. Based on the results of network analysis, cluster analysis and quantitative data from the selected sections, we show that Changhsingian brachiopod communities in South China can be categorized into three assemblages along a marine depth gradient: the Neochonetes–Fusichonetes–Paryphella Assemblage from the shallow-water clastic-rock facies, Spinomarginifera–Peltichia–Oldhamina Assemblage from the shallow-water carbonate platform facies and Fusichonetes–Crurithyris Assemblage from the deep-water siliciclastic intracontinental basin facies. Compared with communities from carbonate platform facies, the communities from siliciclastic facies were characterized by high dominance, low evenness and low lifestyle diversity, which might be important biotic factors leading to earlier extinctions. After the extinction began in all environments, the whole earliest Triassic brachiopod community was first dominated by Fusichonetes and then by Crurithyris. These patterns of domination and replacement could be explained by morphological and ecological advantages. The domination of these two genera, which were already adapted to the oxygen and food-limited deep-water habitat, indicates that the cooler deep-water environment might have been a relatively less stressed habitat after the beginning of the EPME. This suggests that global warming might be the main trigger among the previously proposed synergistic environmental stresses, while anoxia might not, at least for the beginning of EPME.     

Ecological and biodiversity gradients across alpine dry grassland habitats: implications for an endangered species

Dry grasslands are of great interest for nature conservation in Europe, because they have a central role in the conservation of numerous rare and endangered species. In this study carried out in the Brenta mountain group (Italian alps), we investigated the effect of environmental factors mainly controlled by topography, on the biodiversity trends across different dry grassland habitats where the threatened alpine stenoendemic Erysimum aurantiacum grows. Plant community data and ecological factors were analysed by means of a multi‐habitat CCA approach and by analysis of biodiversity gradients in 7 natural and semi‐natural habitats. We found that species turnover and biodiversity patterns vary as a function of multi‐factorial ecological gradients. For the single habitats, elevation gradient was the main factor explaining compositional variation, followed by inclination and proportion of exposed rock surface. Despite its endangered status, E. aurantiacum showed a relatively high degree of ecological plasticity across these semiarid grassland habitats that probably allows it to survive in different environments, including in some cases those impacted by human activities. This prompts for habitat‐ more than species‐level conservation actions. According to their characteristics and threats, habitat‐specific management practices are recommended for long term conservation of plant species communities in the different ecological niches.     

Exploring tree-habitat associations in a Chinese subtropical forest plot using a molecular phylogeny generated from DNA barcode loci

Elucidating the ecological mechanisms underlying community assembly in subtropical forests remains a central challenge for ecologists. The assembly of species into communities can be due to interspecific differences in habitat associations, and there is increasing evidence that these associations may have an underlying phylogenetic structure in contemporary terrestrial communities. In other words, by examining the degree to which closely related species prefer similar habitats and the degree to which they co-occur, ecologists are able to infer the mechanisms underlying community assembly. Here we implement this approach in a diverse subtropical tree community in China using a long-term forest dynamics plot and a molecular phylogeny generated from three DNA barcode loci. We find that there is phylogenetic signal in plant-habitat associations (i.e. closely related species tend to prefer similar habitats) and that patterns of co-occurrence within habitats are typically non-random with respect to phylogeny. In particular, we found phylogenetic clustering in valley and low-slope habitats in this forest, indicating a filtering of lineages plays a dominant role in structuring communities in these habitats and we found evidence of phylogenetic overdispersion in high-slope, ridge-top and high-gully habitats, indicating that distantly related species tended to co-occur in these high elevation habitats and that lineage filtering is less important in structuring these communities. Thus we infer that non-neutral niche-based processes acting upon evolutionarily conserved habitat preferences explain the assembly of local scale communities in the forest studied.     

Importance of scalar and riparian habitat effects for assessment of ecological status using littoral diatoms

The classification of waterbodies under the Water Framework Directive is dependent on the ability of monitoring programmes to reflect habitat quality using biotic elements including benthic diatom communities. This study investigated the influence of specific riparian habitats, of mixed woodland, grassland and lake artificial structures such as jetties and slipways, on benthic diatom assemblages in nine lakes across gradients of total phosphorus, alkalinity and in the presence or absence of Dreissena polymorpha. The heterogeneity of the benthic diatom assemblages at riparian and lake scale was assessed by taking three replicates per site category per lake, following standard European Union protocols. Canonical correspondence analysis (CCA) and mixed effect modelling was used to investigate the main environmental controls on assemblage structure. Non-metric Multidimensional Scaling (NMDS) was used to examine patterns in assemblage structure. No single environmental gradient was found to control benthic diatom composition, with differences among assemblages influenced both by riparian habitat type within lakes and interaction of multiple environment gradients, including presence of D. polymorpha. Greater control was exerted on community structure at the lake than local riparian scale. The influence of scalar factors on diatom assemblages increased with increasing scale. We recommend that for effective monitoring and assessment of ecological status, standard sampling protocols should include localised littoral habitats with individual samples pooled across riparian habitat types, thereby accounting for both multiple environmental and spatial controls on community structure.     

Eulittoral macroinvertebrate communities of lowland lakes: discrimination among trophic states

1. Nutrient inputs from urban and agricultural land use often result in shifts in species composition of pelagic and profundal invertebrate communities. Here, we test if nutrient enrichment affects the composition of eulittoral macroinvertebrate communities, and, if so, if macroinvertebrate communities of five different habitat types reflect differences in trophic state. 2. Macroinvertebrate community composition of 36 lakes was significantly correlated with total phosphorus (TP) concentration, the proportion of coarse woody debris (CWD) and root habitats and the proportion of grassland. 3. However, macroinvertebrate communities of five major habitat types from eight lakes were more dissimilar among habitats than among trophic states. Community composition of reed and stone habitats was significantly correlated with wind exposure but not TP concentration, while macroinvertebrate composition of sand habitats was related to TP concentration and coarse sediments. In CWD and root habitats, both TP concentration and a predominance of invasive species covaried, which made it difficult to relate the observed compositional differences to either trophic state or to the effects of competition between native and invasive species. 4. Trophic state influenced the composition of eulittoral macroinvertebrate communities but to a lesser extent than has been previously reported for profundal habitats. Moreover, the effects of trophic state were nested within habitat type and were partially superseded by biotic interactions and small‐scaled habitat complexity. Although eulittoral macroinvertebrate communities were not strong indicators of the trophic state of lowland lakes, they may be used to assess other anthropogenic impacts on lakeshores.     

Symbiotic germination capability of four Epipactis species (Orchidaceae) is broader than expected from adult ecology

? Premise of the study: Both abiotic and biotic factors shape species distributions. Orchids produce minute seeds with few nutrient reserves, thus requiring mycorrhizal fungi for germination. Therefore, both environmental conditions and mycorrhizal fungi distribution affect their germination success, but these ecological requirements and their congruence with habitat preferences of adults remain poorly understood. We investigated the importance of these factors during germination in four forest orchid species of the genus Epipactis. ? Methods: We sowed seeds of three habitat specialists and one generalist in different forest types at sites harboring adults of at least one of these ecologically diverging species. We analyzed germination pattern and identified mycorrhizal fungi of both seedlings and adults. ? Key results: Habitat conditions had little influence on germination pattern as seedlings grew in more habitats than expected from the adults' ecology. Ectomycorrhizal fungi availability did not limit germination. Suitable mycorrhizal fungi, mostly pezizalean ascomycetes, were recruited in various forest types, though the fungal communities differed according to habitat type. Finally, orchids with divergent ecological preferences shared similar mycorrhizal fungi. ? Conclusions: Limited adult distribution contrasted with successful seed germination at diverse sites and indicates existence of niche differentiation between adults and seedlings. Ecological specialization may thus be determined by factors other than mycorrhizal fungi that act later in the ontogeny, perhaps during the transition to above-ground development.     

Heterogeneity of ecological patterns,processes, and funding of marine manipulative field experiments conducted in Southeastern Pacific coastal ecosystems

Ecological manipulative experiments conducted in marine coastal ecosystems have substantially improved ecological theory during the last decades and have provided useful knowledge for the management and conservation of coastal ecosystems. Although different studies report global trends in ecological patterns worldwide, Southeastern Pacific coastal ecosystems have been poorly considered. Given that the SE Pacific coast encompasses diverse coastal ecosystems, consideration of studies conducted along this range can shed light on the heterogeneity of processes regulating coastal communities. We reviewed the biotic interactions and habitat type considered, as well as the complexity in terms of spatial and temporal extent of manipulative field experimental studies conducted along the SE Pacific coast from 0°S to 56°S (Ecuador to Chile). We test the effect of funding reported by different studies as a main factor limiting experimental complexity. From field ecological studies published from 1970 to 2016, we found that 81 studies were truly manipulative, in which one or multiple factors were “manipulated.” Around 77% of these studies were located between 21°S and 40°S, and conducted in intertidal rocky habitats. An increase in experimental studies was observed between 2010 and 2015, especially focused on herbivore–alga interactions, although we found that both the temporal extent and spatial extent of these studies have shown a decrease in recent decades. Funding grant amount reported had a positive effect on elapsed time of field experiments, but no effect was observed on spatial extent or in the biotic interactions considered. Elapsed time of experiments was different among the main biotic interactions considered, that is, herbivory, predation, and competition. We suggest that to further progress in applied ecological knowledge, it will be necessary to consider pollution and urbanization processes explicitly using a field experimental framework. This information could improve our understanding of how ecosystems present along the SE Pacific coast respond to climate change and increased levels of human interventions.     

The intersection of ecological risk assessment and plant communities: an analysis of <Emphasis Type="Italic">Agrostis</Emphasis> and <Emphasis Type="Italic">Panicum</Emphasis> species in the northeastern U.S.

Ecological risk assessments for grass species with novel traits are advisable, or required, in order to identify potential environmental harms prior to large-scale cultivation. Credible risk assessments are built upon knowledge of the communities that could be negatively affected by crop-to-wild gene flow, new weeds, or invasive plants. This study focused on two cultivated grasses with different life histories: the exotic, weedy Agrostis stolonifera (creeping bentgrass) and the native Panicum virgatum (switchgrass). Vascular plant communities were analyzed in 190 transects (50 m) in ten habitat types across two ecoregions (inland and coastal) in the northeastern U.S. Ordination plots and dendrogram analysis showed clustering of inland plant community assemblages within habitat types, while coastal plant communities were similar across the habitats studied. Agrostis and Panicum species had unequal distribution across the habitat types and ecoregions. Agrostis species were more common in the inland ecoregion and habitats receiving moderate management or disturbance events. In both ecoregions, A. stolonifera had high co-occurrence values with other exotic Agrostis species, suggesting potential for interspecific gene flow. P. virgatum was most common in inland roadside and wasteland habitats, but was distributed equally in the three coastal habitats. Co-occurrence between P. virgatum and congenerics was infrequent, although one transect had both P. virgatum and the state-listed coastal species Panicum amarum. This is the first study to characterize Agrostis and Panicum plant communities and distribution providing the basis for ecological risk assessments, coexistence-strategies, and geographic exclusion zones.     

Resource Availability and Spatial Heterogeneity Control Bacterial Community Response to Nutrient Enrichment in Lakes

The diversity and composition of ecological communities often co-vary with ecosystem productivity. However, the relative importance of productivity, or resource abundance, versus the spatial distribution of resources in shaping those ecological patterns is not well understood, particularly for the bacterial communities that underlie most important ecosystem functions. Increasing ecosystem productivity in lakes has been shown to influence the composition and ecology of bacterial communities, but existing work has only evaluated the effect of increasing resource supply and not heterogeneity in how those resources are distributed. We quantified how bacterial communities varied with the trophic status of lakes and whether community responses differed in surface and deep habitats in response to heterogeneity in nutrient resources. Using ARISA fingerprinting, we found that bacterial communities were more abundant, richer, and more distinct among habitats as lake trophic state and vertical heterogeneity in nutrients increased, and that spatial resource variation produced habitat specific responses of bacteria in response to increased productivity. Furthermore, changes in communities in high nutrient lakes were not produced by turnover in community composition but from additional taxa augmenting core bacterial communities found in lower productivity lakes. These data suggests that bacterial community responses to nutrient enrichment in lakes vary spatially and are likely influenced disproportionately by rare taxa.     

Ecological filtering or random extinction? Beta‐diversity patterns and the importance of niche‐based and neutral processes following habitat loss

Although both niche‐based and neutral processes are involved in community assembly, most models on the effects of habitat loss are stochastic, assuming neutral communities mainly affected by ecological drift and random extinction. Given that habitat loss is considered the most important driver of the current biodiversity crisis, unraveling the processes underlying the effects of habitat loss is critical from both a theoretical and an applied perspective. Here we unveil the importance of niche‐based and neutral processes to species extinction and community assembly across a gradient of habitat loss, challenging the predictions of neutral models. We draw on a large dataset containing the distribution of 3653 individuals of 42 species, representing 35% of the small mammal species of the Atlantic Forest hotspot, obtained in 68 sites across three continuously‐forested landscapes and three adjacent 10 000‐ha fragmented landscapes differing in the amount of remaining forest (50%, 30% and 10%). By applying a null‐model approach, we investigated β‐diversity patterns by detecting deviations of observed community similarity from the similarity between randomly assembled communities. Species extinction following habitat loss was decidedly non‐random, in contrast to the notion that fragmented communities are mainly driven by ecological drift. Instead, habitat loss led to a strong biotic homogenization. Moreover, species composition changed abruptly at the same level of landscape‐scale habitat loss that has already been associated with a drastic decline in species richness. Habitat loss, as other anthropogenic disturbances, can thus be seen as a strong ecological filter that increases (rather than decreases) the importance of deterministic processes in community assembly. As such, critical advances for the development of conservation science lie on the incorporation of the relevant niche traits associated with extinction proneness into models of habitat loss. The results also underscore the fundamental importance of pro‐active measures to prevent human‐modified landscapes surpassing critical ecological thresholds.     

Bird communities of natural and modified habitats in Panama

Only a small proportion of land can realistically be protected as nature reserves and thus conservation efforts also must focus on the ecological value of agroecosystems and developed areas surrounding nature reserves. In this study, avian communities were surveyed in 11 habitat types in central Panama, across a gradient from extensive forest to intensive agricultural land uses, to examine patterns of species richness and abundance and community composition. Wooded habitats, including extensive and fragmented forests, shade coffee plantations, and residential areas supported the most species and individuals. Nearctic-Neotropical migratory species were most numerous in lowland forest fragments, shade coffee, and residential areas. Introduced Pinus caribbea and sugar cane plantations supported the fewest species compared to all other habitats. Cattle pastures left fallow for less than two years supported more than twice as many total species as actively grazed pastures, such that species richness in fallow pastures was similar to that found in wooded habitats. Community similarities were relatively low among all habitat types (none exceeding the observed 65% similarity between extensive and fragmented lowland forests), but communities in shade coffee and residential areas were 43% and 54′% similar to lowland forest fragments, respectively. Fallow pastures and residential areas shared 60% of their species. Bird communities in shade coffee and residential areas were characterized by higher proportions of frugivorous and nectarivorous species than in native forests. These same guilds also were better represented in fallow than in grazed pastures. Raptors and piscivorous species were most prevalent in cattle pastures and rice fields. These results, though based upon only species richness and abundance, demonstrate that many human-altered habitats have potential ecological value for birds, and conservation efforts in tropical areas should focus greater attention on enhancement of agricultural and developed lands as wildlife habitat. To understand the true conservation value of these modified lands will require examination not only of numbers but also of the types of species supported by these habitats, their reproductive output and survival rates.     

Habitat conservation prioritization: A floristic approach applied to a Mediterranean wetland network

The importance of plant communities for conservation purposes is recognized in their inclusion in the “Habitat Directive” (92/43 EEC), that relates habitat types to plant community syntaxonomic units. However, habitat definitions in the Habitat Directive lead to several inaccuracies in local habitat characterization. Several wetland plant communities (and their corresponding habitats), rare in the Mediterranean basin, are not included in the Habitat Directive. This study proposes criteria for assessing the conservation importance of habitats. It deals with plant community types at the alliance level, as promising units for setting conservation priorities. The principle criteria considered as drivers for setting alliance conservation values are the distribution and abundance of plant species of conservation interest and their fidelity to a plant community. Multivariate methods were used, and a quantitative floristic index of alliance conservation priority was created. This procedure was applied to an important wetland in central Italy. Results emphasize: (i) high conservation values of some alliances not listed in the Habitat Directive, confirming various gaps in the current conservation law affecting Mediterranean wetlands; (ii) that habitats widely distributed in other biogeographical areas, may greatly underestimate their conservation importance in Mediterranean region; (iii) need to consider regional peculiarities when setting conservation priorities.