Rearing and migration of juvenile Chinook salmon (<Emphasis Type="Italic">Oncorhynchus tshawytscha</Emphasis>) in a large river floodplain

Off-channel habitat has become increasingly recognized as key for migratory fishes such as juvenile Chinook salmon (Oncorhynchus tshawytscha). Hence, floodplain habitat has been identified as critical for the continued persistence of California’s Central Valley salmon, particularly the Yolo Bypass, the primary floodplain of the Sacramento River. To provide insight into factors supporting juvenile salmon use of this 240 km², partially leveed floodplain, we examined inter- and intra-annual relationships between environmental correlates and residency time, apparent growth, emigration, migratory phenotype, and survival over more than a decade for natural-origin (“wild”) fish and experimentally-released hatchery fish. Flood duration was positively associated with hatchery juveniles residing longer and achieving larger size. Wild juveniles grew larger and emigrated later with cumulative temperature experience (accumulated thermal units) and warmer average annual temperatures during flood years. Within years, both wild and hatchery salmon departed the floodplain as flood waters receded. Parr-sized juveniles dominated outmigrant composition, though fry and smolt-sized juveniles were also consistently observed. Survival to the ocean fishery was not significantly different between hatchery fish that reared in the Yolo Bypass versus those that reared in the main stem Sacramento River. Our study indicates improved frequency and duration of connectivity between the Sacramento River and the Yolo Bypass could increase off-channel rearing opportunities that expand the life history diversity portfolio for Central Valley Chinook salmon.     

Benefits of adjacent habitat patches to the distribution of a crayfish population in a hydro-dynamic wetland landscape

Aquatic macrophyte patches are natural features of wetland ecosystems that serve as habitat for aquatic animals. Previous studies suggest animal densities in Everglades, USA, wetlands are generally less numerous in sawgrass ridges than in deeper lily sloughs. We studied the density distribution of a population of Procambarus fallax in ridge and slough habitat types over a 2-year period, spanning two wet–dry cycles and estimated growth and survival rates under flooded conditions to understand comparative value of each to the crayfish population. Procambarus fallax individuals inhabited and recruited in both marsh habitats. During periods of high water, crayfish densities were similar in both habitats; however, densities in both habitats varied seasonally, leading us to postulate some degree of population redistribution in response to fluctuating water depths. Analysis of size distributions over time revealed juveniles in both habitats and two major recruitment periods each year; distinct juvenile cohorts were present in early winter (Nov–Dec) and mid-summer (July–Aug). An in situ experiment of juvenile growth demonstrated that slough habitat type supported faster growth over ridge habitat. To understand habitat-specific mortality risk, a tethering study during flooded conditions indicated that relative predation risk by aquatic predators was greater in sloughs for all sizes and higher for smaller individuals in both habitats. The comparative importance of ridge and slough balances growth potential and survival probability during flooded conditions. This is the first study through time and across both habitat types analyzing the distribution and size structure of P. fallax population in the Everglades.     

Velocity and dominance affect prey capture and microhabitat selection in juvenile Chinook (<Emphasis Type="Italic">Oncorhynchus tshawytscha</Emphasis>)

Habitat selection is an important phenomenon that may greatly affect individual fitness. Using an artificial stream, we examined the relationship between the percentage of prey captured, reactive distance, dominance, and water velocity for juvenile Chinook Salmon (Oncorhynchus tshawytscha) from the Chena River, Alaska, and tested the fitness-based microhabitat selection model of Grossman et al. (Ecol Freshw Fish 11:2–10, 2002). Recent declines in the abundance of Chinook accentuate our need for habitat selection studies on this species. We conducted three experiments: two with single fish (1st N?=?27, fish SL 58–84 mm, 2nd N?=?14, fish SL 49–56 mm) and one with pairs of dominant and subordinate fish (N?=?10 pairs, 64–96 mm, mean difference in SL?=?7 mm). We placed individual or pairs of fish in an artificial flume and recorded reactive distance and the percent prey capture with individual dead brine shrimp (Artemia spp.) as prey. Prey were presented at 10 cm/s velocity intervals ranging from 10 to 60 cm/s; velocities found in the natural habitat. Mean reactive distance in single fish experiments (henceforth SFE) averaged 33 and 29 cm respectively, and was not related to velocity. We detected a negative, curvilinear relationship between velocity and percent prey capture. Holding velocities for juvenile Chinook were significantly lower than prey capture velocities. The Grossman et al. (Ecol Freshw Fish 11:2–10, 2002) model yielded an optimal focal-point velocity prediction of 35 cm/s for juvenile Chinook, however focal-point velocities occupied by juveniles in the Chena River averaged 12 cm/s. Predicted optimal velocities were present in the Chena River; hence, this discrepancy suggests that other factors such as distraction from drifting debris or predation risk influenced habitat selection. There were no differences in reactive distances or holding velocity/capture velocity relationships for dominant and subordinate fish; however, dominants captured significantly more prey than subordinates. Being subordinate resulted in a decrease of 61% in mean percent prey capture (the difference between what was captured by the fish alone versus the difference with a dominant), whereas the mean cost to fish with dominant rank was a 21% decline between the percentage captured alone versus that with a subordinate.     

Between-year variations in the development of crustacean zooplankton in the Norwegian subalpine lake, Øvre Heimdalsvatn

Data from the International Biological Programme (IBP) and subsequent studies have been re-analysed to test the two hypotheses which previously have been suggested concerning the zooplankton in the mountain lake, Øvre Heimdalsvatn: (1) the average temperature in June, more than other summer months, is affecting the growth rate and population densities of zooplankton in the lake, (2) the invasion of the European minnow (Phoxinus phoxinus) has caused changes in the zooplankton community. The analyses have demonstrated that the June temperature strongly affects the growth rate of all the zooplankton species, but that there is no relationship with the population maxima. The species composition in the crustacean zooplankton has not changed between 1969 and 1999, and any direct impact of the minnows on the zooplankton community could not be detected. Indirectly, the minnows may have reduced the density of invertebrate predators, and thus caused an increase in juvenile survival and increased summer maximum density of Bosmina longispina. The variation in density of the copepod, Cyclops scutifer, was correlated with the density of Heterocope saliens, most likely the result of predator–prey interactions.     

Ontogenetic shifts in the diets of juvenile Chinook Salmon: new insight from stable isotopes and fatty acids

Variations in marine prey availability and nutritional quality can affect juvenile salmon growth and survival during early ocean residence. Salmon growth, and hence survival, may be related to the onset of piscivory, but there is limited knowledge on the interplay between the prey field, environment, and salmon ontogeny. Subyearling Chinook Salmon (Oncorhynchus tshawytscha) and their potential prey were sampled in coastal waters off Willapa Bay, USA to explore this issue. Three seasonal prey assemblages were identified, occurring in spring (May), early summer (June – July), and late summer (August – September). The onset of piscivory, based on salmon stomach contents, fatty acids, and stable isotopes occurred later in 2011 compared to 2012, and coincided with the appearance of Northern Anchovy (Engraulis mordax). Salmon fork length (FL) and carbon isotope values (δ¹³C) increased with a fatty acid biomarker for marine phytoplankton and decreased with a freshwater marker, indicating dietary carbon sources changed as salmon emigrated from the Columbia River. Salmon FL also increased with nitrogen isotope ratios (δ¹⁵N), trophic position, and a fatty acid marker for piscivory – a consequence of the ontogenetic shift in diet to fish. Salmon grew faster and obtained larger size and condition by September 2011 compared to 2012, which was related to inter-annual differences in ocean conditions and the duration over which Northern Anchovy were available. Our results support the idea that juvenile salmon growth depends on the onset and duration of piscivory, suggesting both of these factors may be important components of lifetime growth and fitness.     

<Emphasis Type="Italic">Genista</Emphasis> dwarf shrubs as key structures for a Mediterranean grasshopper species on alluvial gravel banks

Natural floodplains belong to the most species-rich ecosystems worldwide. However, over the last decades there has been a strong decrease in the extent of natural floodplains. As a consequence, the biodiversity of these ecosystems has experienced a dramatic decline. In this study, we investigated the habitat and food preferences of the grasshopper species Chorthippus binotatus on gravel banks of a nearly natural river system in the Spanish Pyrenees. The studied plots on the alluvial gravel banks in the Spanish Pyrenees were characterised by strong differences in habitat structure. However, C. binotatus only occurred in sparsely-vegetated sub-Mediterranean dry grasslands. The abundance of the grasshopper species was also strongly related to habitat structure and cover of the main food source and dominant plant species of these open grasslands, the dwarf shrub Genista scorpius. Concerning habitat structure, the grasshopper species preferred habitats with sparse and low-growing vegetation with a high cover of bare ground and gravel/stones. C. binotatus occupies a very narrow ecological niche within the studied floodplain. It requires sparsely-vegetated gravel banks that ensure sufficient oviposition sites and a favourable ambient temperature for optimal development. G. scorpius dwarf shrubs have to be considered as multi-functional key elements in the habitats of C. binotatus. They offer high-quality food, shelter against predators and allow thermoregulation in a hot and dry Mediterranean environment. For the conservation of C. binotatus, we recommend maintaining and restoring both natural floodplain dynamics as well as traditional grazing systems.     

Field associations of first generation densities of the pest mites <Emphasis Type="Italic">Halotydeus destructor</Emphasis> and <Emphasis Type="Italic">Penthaleus major</Emphasis> in pasture

Halotydeus destructor and Penthaleus major are species of earth mite commonly found at high densities in agricultural fields in Australia and other parts of the world. These mites pose a risk to a range of winter crops and pastures when seedlings emerge in autumn. In order to predict likely mite pressure, we investigated whether autumn densities in pastures can be determined from agronomic and environmental field variables. For H. destructor, field densities showed little association with a range of vegetation variables but could largely be explained using the variable field type, with high densities present when fields had mixtures of grass, clover and weeds. For P. major, we found a regional effect. In the region where most data were available, P. major field densities were associated with grass abundance, whereas an association with field type was significant but different to that found for H. destructor. For both species, densities were not associated with rainfall, but there was a weak association with soil moisture capacity. We discuss how these results can help in managing these important pest mites.     

New Agrostis from the California coast

Agrostis clivicola, A. clivicola var.punta-reyesensis andA. blasdalei var.marinensis are described from the California coast. A key distinguishes these from other species of similar habit and habitat.     

Caprinae (Bovidae,Artiodactyla, Mammalia) from the Neogene of Mongolia

Gobiocerus mongolicus Sokolov, 1952, Turcocerus kekemaidengensis Ye Jie et al., 1999; and Hypsodontus sp. were recorded in Miocene deposits of the Valley of Lakes (MN4-MN8) and Oioceros atropatenes (Rodler et Weithofer, 1890) occurred in the Mio-Pliocene (MN11-MN20) of northwestern Mongolia. Gobiocerus, Turcocerus, and Hypsodontus represent the same evolutionary lineage. Thus, Caprinae existed in Central Asia in the Early Miocene. They diverged from the Bovidae at the Oligocene-Miocene boundary. The presence of early bovids in this region suggests that this group could have appeared in Central Asia.     

Optimization of Methodology for Rearing <Emphasis Type="Italic">Spodoptera albula</Emphasis> on Artificial Diet

Advances in techniques for rearing insects on artificial diets are fundamental to solving issues of basic and applied entomology. In this study, we evaluated the development of Spodoptera albula (Walker) (Lepidoptera: Noctuidae) on three artificial diets used for other species of Lepidoptera, at three larval densities, and two densities of adult couples housed in oviposition cages of two sizes, with the aim of optimizing methodology for rearing S. albula in the laboratory. Biological parameters were recorded from S. albula, and a fitness index was calculated based on the larval survival and duration and weight of pupae. The total and daily oviposition was recorded using 5 or 10 adult couples of S. albula housed in two cage sizes. Concentrations of total nitrogen and protein in the tested diets were determined. Development of S. albula was completed in all artificial diets; however, the diet used for rearing Anticarsia gemmatalis (Hübner) larvae was the most suitable for S. albula, yielding intermediate development time and higher survival relative to the other diets. Individualization of larvae favored S. albula development by producing overall greater weights of larvae and pupae, higher survival rates, and longer adult longevity. Cage size and number of couples per cage did not influence S. albula fecundity in the experiment conditions. Spodoptera albula can be satisfactorily reared on the artificial diet used for A. gemmatalis, using one larva per tube, and either density of adults at any cage size. Additional amendments are needed in the rearing methodology to achieve optimal conditions for larval development to adulthood.     

Distribution and habitat associations of the California moray (<Emphasis Type="Italic">Gymnothorax mordax</Emphasis>) within Two Harbors,Santa Catalina Island,California

While kelp forests are some of the best-surveyed ecosystems in California, information on cryptic inhabitants and their role within the community are lacking. Kelp itself provides overall structure to the habitat; however the rocky reef to which the kelp attaches is known to provide additional structure for cryptic species. Gymnothorax mordax, the California moray, is an elusive predatory species that is considered abundant in the waters around Catalina Island. However, no life history data exists for this species. We examined habitat composition, relative abundance, size pattern distributions, and biomass of G. mordax within Two Harbors, Catalina Island. Habitats were sampled using a combination of baited trap collection and transect surveys using SCUBA. A total of 462 G. mordax were captured, primarily in shallow (< 10 m) waters. Individuals of G. mordax were associated with mostly boulder and cobble substrates. Measurements of relative abundance and density indicate that G. mordax is more prevalent than reported in previous studies. We also discovered that the 6 trapping sites from which all morays were collected, differed in size structuring and density while the relatively high biomass did not change across sites. In general, southern facing sites exhibited higher densities of morays, while northern facing sites showed more size structuring. We show how the structural complexity of the rocky reef habitat in an already diverse kelp forest ecosystem, can support a high biomass of a cryptic elongate predatory fish.     

Forest Type Influences Population Densities of Nocturnal Lemurs in Manompana,Northeastern Madagascar

Forest loss, fragmentation, and anthropization threaten the survival of forest species all over the world. Shifting agriculture is one of these threatening processes in Madagascar. However, when its cycle is halted and the land is left to regenerate, the resulting growth of secondary forest may provide a viable habitat for folivorous and omnivorous lemur species. We aimed to identify the response of nocturnal lemurs to different successional stages of regenerating secondary, degraded mature, and mature forest across a mosaic-type landscape. We surveyed four nocturnal lemur species (Avahi laniger, Microcebus cf. simmonsi, Allocebus trichotis, and Daubentonia madagascariensis) in four forest types of varying habitat disturbance in northeastern Madagascar. We estimated densities in mature and regenerating secondary forest for the eastern woolly lemur (Avahi laniger) and mouse lemur (Microcebus cf. simmonsi), two sympatric species with folivorous and omnivorous diets respectively. We did not estimate densities of Allocebus trichotis and Daubentonia madagascariensis owing to small sample size; however, we observed both species exclusively in mature forest. We found higher population densities of A. laniger and M. cf. simmonsi in secondary than in mature forest, showing the potential of regenerating secondary forest for lemur conservation. Several environmental factors influenced the detectability of the two lemur species. While observer and habitat type influenced detection of the eastern woolly lemur, canopy height and vine density influenced detection of mouse lemurs. Understanding how different species with different diets interact with anthropogenically impacted habitat will aid future management decisions for the conservation of primate species.     

California vernal pool endemic responses to hydroperiod,plant thatch,and nutrients

Many endemic large branchiopods inhabit ephemeral freshwater ecosystems, including California vernal pools. Hydroperiod, inundation length, has been well studied in these systems that cycle between aquatic and terrestrial phases, but species’ responses to other ecological processes are still poorly known. For example, temporal (plant thatch from the previous terrestrial phase) and spatial (nutrient runoff) factors may have strong effects on emergence and population densities during the aquatic phase. We examined the effects of hydroperiod stability, thatch, and nutrients on the emergence and density of 4 vernal pool endemic species: Branchinecta lynchi (Anostraca), Linderiella occidentalis (Anostraca), Lepidurus packardi (Notostraca), and Cyzicus californicus (Spinicaudata). A full factorial mesocosm experiment was conducted which measured species densities, along with water quality variables. Hydroperiod and thatch differentially affected 3 of the 4 species based on emergence timing and life cycle. Treatments had effects on many water quality variables, and these variables were correlated with densities. These results highlight how hydroperiod stability along with other processes can affect large branchiopod species in temporary freshwater ecosystems. California vernal pools are a greatly reduced habitat rich in endemic and endangered species (including Branchinecta lynchi and Lepidurus packardi), and therefore, these results have implications for conservation and management.     

Functional Response and Matrix Population Model of <Emphasis Type="Italic">Podisus nigrispinus</Emphasis> (Dallas, 1851) (Hemiptera: Pentatomidae) fed on <Emphasis Type="Italic">Chrysomya putoria</Emphasis> (Wiedemann, 1818) (Diptera: Calliphoridae) as Alternative Prey

Among the predators with high potential for use in biological control, the species of the genus Podisus (Hemiptera: Pentatomidae) have received special attention for laboratory rearing, since they feed on different agricultural and forestry pest insects. However, the type of diet offered to insects in the laboratory may affect the viability of populations, expressed essentially by demographic parameters such as survival and fecundity. This study assessed demographic and development aspects in experimental populations of Podisus nigrispinus (Dallas, 1851) fed on larvae of Chrysomya putoria (Wiedemann, 1818) (Diptera: Calliphoridae) as an alternative prey. The demographic parameters fecundity and survival were investigated in life stages of P. nigrispinus with ecological modeling, by applying the Leslie matrix population model, producing histograms of life stages in successive time steps. The functional response of P. nigrispinus was also investigated on seven densities of C. putoria third-instar larvae at 24 and 48 h. The survival of predators that reached adulthood was 65% and the development time from egg to adult was 23.15 days. The predator showed a type III functional response for consumption of C. putoria at 24 and 48 h. The Leslie-matrix simulation of the age structure provided perpetuation of the predator population over time steps and the prey proved to be feasible for use in rearing and maintenance of P. nigrispinus in the laboratory.     

An endangered seahorse selectively chooses an artificial structure

The development of a residential marina estate within the Knysna estuary, South Africa, introduced Reno mattresses (horizontal wire cages filled with rocks) as a novel habitat for the endangered Knysna seahorse Hippocampus capensis. Consistently high seahorse densities on these artificial structures, despite the availability of seagrass habitat, begged the question of whether this habitat was chosen by the seahorse in preference to natural vegetation. An in situ habitat choice experiment was conducted which focused on the choice made by adult H. capensis between natural vegetation (Zostera capensis) and artificial (Reno mattress) habitat within a choice chamber. Seahorses were significantly more likely to move away from Z. capensis onto a Reno mattress structure or remain on this structure. This study concludes that higher H. capensis densities on Reno mattresses within Thesen Islands Marina are owing to some positive feature of this habitat and the underlying processes responsible for the choice made by this species (additional food, holdfasts, protection) can now be investigated.     

Diversity of juvenile Chinook salmon life history pathways

Life history variability includes phenotypic variation in morphology, age, and size at key stage transitions and arises from genotypic, environmental, and genotype-by-environment effects. Life history variation contributes to population abundance, productivity, and resilience, and management units often reflect life history classes. Recent evidence suggests that past Chinook salmon (Oncorhynchus tshawytscha) classifications (e.g., ‘stream’ and ‘ocean’ types) are not distinct evolutionary lineages, do not capture the phenotypic variation present within or among populations, and are poorly aligned with underlying ecological and developmental processes. Here we review recently reported variation in juvenile Chinook salmon life history traits and provide a refined conceptual framework for understanding the causes and consequences of the observed variability. The review reveals a broad continuum of individual juvenile life history pathways, defined primarily by transitions among developmental stages and habitat types used during freshwater rearing and emigration. Life history types emerge from discontinuities in expressed pathways when viewed at the population scale. We synthesize recent research that examines how genetic, conditional, and environmental mechanisms likely influence Chinook salmon life history pathways. We suggest that threshold models hold promise for understanding how genetic and environmental factors influence juvenile salmon life history transitions. Operational life history classifications will likely differ regionally, but should benefit from an expanded lexicon that captures the temporally variable, multi-stage life history pathways that occur in many Chinook salmon populations. An increased mechanistic awareness of life history diversity, and how it affects population fitness and resilience, should improve management, conservation, and restoration of this iconic species.     

Patterns of microhabitat and larval host-plant use by an imperiled butterfly in northern Florida

The quality of habitat for a given species is fundamental to its persistence in that habitat space. Herbivorous insects often require a specific combination of host plants, floral resources, and physical features such as shelter. Identifying these different habitat features is a focus of ecology and conservation, particularly for managing rare or imperiled taxa. We investigated the patterns of microhabitat and host plant use of the rare frosted elfin butterfly, Callophrys irus, a larval host-plant specialist found in frequently disturbed sand plains, barrens, and sandhill pine-oak forests of the eastern United States. Previous studies have been conducted on populations in the Northeastern and Midwestern US, but the southern part of its range remains unstudied. Our efforts focused on a persistent C. irus colony in northeastern Florida, resulting in a geographically referenced census of larval host-plant Lupinus perennis, along with a multiple year survey of microhabitat features relevant to both C. irus adults and immatures. Results of the larval host-plant census revealed that the highest densities of host plants were located distant to the highest densities of C. irus. Hot-spot analysis confirmed the significance of this pattern, suggesting different habitat requirements for larval host-plant L. perennis and C. irus individuals in order to achieve maximum potential densities. Our survey of C. irus immatures showed a similar pattern of microhabitat affinity that was previously recorded in the Northeast and Midwestern US, including large larval host-plants, low amounts of ground cover vegetation, and the presence of some shade. Unique to our study we found that the presence of other herbivores of L. perennis such as larvae of the crambid moth Uresiphita reversalis had a negative effect on encountering C. irus immatures. Our results suggest that management that aims to conserve these species needs to include habitat factors that favor the overlap of these species and to consider where their densities are the highest.     

Assessing the outcomes of stocking hatchery-reared juveniles in the presence of wild Atlantic salmon

Stocking of hatchery-reared juvenile Atlantic Salmon Salmo salar is a common enhancement and recovery strategy across jurisdictions, yet its impact remains uncertain. We investigate the potential effectiveness of stocking in the Miramichi River system where approximately 150,000 first-feeding fry are stocked annually in reaches where wild juveniles are present. Local site and landscape level characteristics were used to fit predictive models for wild parr densities measured as Percent Habitat Saturation (PHS) using Partial Least Squares Regression (PLSR). The observed PHS of stocked sites was found to be significantly lower than predicted, suggesting stocking has not been effective in increasing the PHS in the studied stocked sites. The results suggest that habitat and other density dependent effects limit productive capacity in this system, and consequently, may limit the effectiveness of stocking in other systems with natural production.     

Field assessment of environmental factors constraining the development and expansion of <Emphasis Type="Italic">Schoenoplectus californicus</Emphasis> marsh at a California tidal freshwater restoration site

The effective restoration of wetland habitats requires understanding the establishment requirements, growth responses, and expansion dynamics of targeted plant species. This is particularly true when restoring areas that have been previously managed for other activities, such as agriculture, which can have legacy effects on the local environment. We investigated environmental factors (specifically hydrology and soil physicochemical conditions) that may influence the establishment, growth and expansion of Schoenoplectus californicus in a tidal freshwater marsh restoration site in the Sacramento–San Joaquin Delta, California, USA. This study site was previously leveed, drained, and utilized for agricultural production. A 1997 levee breach restored tidal connectivity and wetland vegetation has re-established in portions of the area. Our approach coupled an intensively-sampled transect study in S. californicus-dominated marshes with a spatially-extensive survey of S. californicus lateral expansion rates and elevation. Lateral expansion of S. californicus marsh edge was significantly less in lower elevation areas (0.61 ± 0.04 m NAVD88), whereas the marsh edge at higher elevations (0.84 ± 0.03 m NAVD88) exhibited greater expansion, often at rates greater than 1.0 m year^?1. These elevation means correspond to percentages of time that the marsh surface was flooded of 100 and 94 %, respectively. Although marsh edge expansion was influenced by elevation and the resultant hydrology, other factors, such as physical exposure of marsh shorelines and compacted agricultural soils also appear to be important. However, once established, S. californicus appears to be able to ameliorate high soil bulk densities over time as the advancing marsh platform develops.