两种核酸染料染色效果的比较研究

用前染和后染两种不同的染色方法,研究比较SYBRGreenI和溴化乙锭(EB)两种核酸染料对凝胶中DNA的染色效果和灵敏度,及SYBRGreenI取代EB用于常规凝胶中核酸染色的可能性。结果表明,用前染法染色SYBRGreenI对琼脂糖凝胶中的核酸染色效果与EB相当;用后染法染色前者要优于后者,可显示5ng以下的DNA条带,在完全相同的操作条件下,其染色DNA条带背景清晰,灵敏度较高。因此,无致突变性新型染料SYBRGreenI可替代强致突变性染料EB用于检测凝胶中DNA片段大小、含量等,从而减少由于使用EB带来的环境污染和人体健康危害。     

果蝇唾腺染色体的几种染色方法比较

《生物学通报》编委 :您好。笔者对贵刊 2 0 0 2年第 37卷第 2期第 2 3页刊登的“用 Feuglen染色法制作果蝇唾腺染色体”一文感兴趣 ,但笔者认为文中几处不妥 ,比如 1)水浴温度波幅偏高 ;2 )染色时间不确定 ;3)试剂配方不全 ;4 )盐酸的浓度单位有误 ,mol?M?;5 )注意事项影响实验结果表述不清。特撰写下文与各位读者商榷。双翅类昆虫如黑腹果蝇 (Drosophila melanogaster)的唾腺染色体 (Salivary chromosome)比普通染色体大的多 ,处于体细胞同源染色体的配对状态 ,是由于唾腺染色体经过多次复制而并不分开形成的 ,大约有 10 0 0～4 0 0 0根…     

皮肤组织神经髓鞘几种染色方法的比较

对皮肤组织神经髓鞘应用髓磷脂硷性蛋白myelin basic protein简称MBP）免疫组织化学,劳克坚牢蓝(Luxol fast blue,简称LFB）,砂罗铬花青（solochrome cyanine简称SC）,KOH-HIO4-Schiff四种不同的染色方法进行染色比较,结果显示,MBP法具有特异性强,背景干净,对比清晰等特点。SC、Schiff法髓鞘着色效果亦较好,但背景中其他组织也着色,只要分化适当,LFB法髓鞘着色鲜明,且有一定特异性。     

细菌鞭毛染色中几种制片方法比较

细菌鞭毛染色是微生物学实验教学内容之一,也是对细菌进行分类鉴定的重要实验之一。但由于在染色过程中鞭毛常脱落,而且背景上也堆积了染料沉淀,给镜检观察造成困难。为此,我们采用鞭毛染色实验常用菌种,用几种制片方法进行比较,发现用液体培养菌种或菌悬液为材料,用适当方法制片,然后再进行染色观察,可较好地克服上述困难。具体方法及结果如下：１　材料１．１　菌种　苏云金杆菌（Ｂａｃｉｌｌｕｓｔｈｕｒｉｎｇｉｅｎｓｉｓ）１．２　鞭毛染色液１）Ａ液：单宁酸：５ｇ;ＦｅＣｌ３：１．５ｇ;蒸馏水：１００ｍｌ;福尔马林（…     

两种常用的免疫组化染色方法对NOS染色效果的比较

目的比较ABC法和SP法两种免疫组织化学染色方法的染色效果。方法通过免疫组化检测一氧化氮合酶的三个亚型的蛋白i NOS、e NOS和n NOS的表达,观察三种蛋白的染色结果。结果 SP法检测i NOS和e NOS的敏感性要明显强于ABC法;SP法蛋白染色结果明显优于ABC法。结论 SP法检测NOS优于ABC法。     

应用RT-qPCR技术定量检测湖泊水体中蓝藻方法的比较

利用RT-qPCR技术建立了对湖泊水体中的微囊藻和蓝藻的SYBR Green Ⅰ荧光定量PCR检测方法,在所建立的方法中,对以微囊藻藻蓝蛋白基因、蓝藻16S rRNA基因、微囊藻16S rRNA基因分别作为RT-qPCR检测的目的基因所得结果进行了比较,并对实验室培养的微囊藻和太湖的环境样品进行了检测。结果表明,用藻蓝蛋白基因作为检测目的基因,以M.aeruginosa PCC 7806基因组DNA作为标准品的测定方法与显微镜计数的结果有较好的相关性和一致性,并具有简便、快速、特异性高的特点,可以满足检测的要求。     

HE染色细胞核灰染的处理方法比较研究

目的探讨HE染色细胞核灰染的处理方法,提高HE染色质量。方法收集10例HE染色发灰的胃粘膜、肠息肉和子宫内膜等不同类型的组织,重新切片,通过调整苏木素染色条件以及染色前对组织进行修复处理,设对照组,比较各种处理方法的染色效果。结果通过延长时间、水浴加热和微波加热等调整苏木素染色条件的方法以及水煮修复处理法能够不同程度地促进核染色,但灰染现象未能彻底解决。PBS、EDTA、柠檬酸分别采用高压和微波修复处理均能较好地改善HE染色细胞核灰染现象,以PBS微波处理法效果最佳。结论 PBS微波处理法是HE染色细胞核灰染现象的一种有效处理方法。     

水貂肠炎病毒SYBR GreenⅠ荧光定量PCR检测方法的建立

根据Gen Bank登录的水貂肠炎病毒(MEV)VP2蛋白基因的保守序列设计了1对特异性引物,经PCR扩增出146bp的目的片段,并克隆到pMD 18-T载体上,提取重组质粒经PCR及测序鉴定正确后,以10倍梯度稀释质粒作为阳性标准品,绘制荧光定量标准曲线,以此建立一种基于SYBR Green荧光染料的定量PCR特异性检测水貂肠炎病毒的方法。结果表明:该方法对MEV有很好的特异性,检测灵敏度为34拷贝/μL,且重复性试验变异系数均小于2%。临床检测中,在80份样品中检测到30份阳性样品,高于普通PCR和电镜观察方法的检出率。该方法的建立实现了对MEV临床早期快速诊断和定量分析,为毛皮动物MEV的防控提供了可靠的检测方法。     

SYBR Green Ⅰ实时荧光定量RT-PCR测定猴免疫缺陷病毒RNA拷贝数方法的建立

目的 建立SYBR Green Ⅰ荧光染料实时定量RT-PCR方法,测定猴免疫缺陷病毒(SIV)RNA拷贝数.方法 巢式RT-PCR扩增SIV病毒RNA gag基因上1360-1837之间的长度为477 bp的片段,将该片段克隆到pGEM T载体上,构建pGEM-SIVgag477质粒.该质粒经限制性内切酶Not I酶切后,进行体外转录,转录出的RNA产物(RS)纯化后10倍系列稀释,作出标准曲线,作为SIV病毒RNA荧光定量检测的外标准品.结果 应用Qiagen公司QuantiTect SYBR GREEN RT-PCR Kit,该标准品可精确定量到100 copies/μL.结论 制备的RS外标准品纯度高,SYBR Green Ⅰ荧光染料实时定量RT-PCR法特异性、敏感性高,稳定性好,可用于定量测定猴免疫缺陷病毒(SIV)RNA拷贝数.     

SYBR Green Ⅰ荧光定量RT-PCR检测埃博拉病毒方法的建立

为了建立一种快速准确的检测埃博拉病毒(EBOV)亚型的方法。本研究根据GenBank中公布的EBOV NP基因序列,通过设计引物和优化反应条件,建立了一种SYBR GreenⅠ荧光定量RT-PCR检测方法检测EBOV。以体外转录的EBOV RNA为模板进行试验,该方法检测的灵敏度可以达到1.0×102个拷贝/μL,检测范围达到9个数量级为102～1010,可检测5种亚型EBOV。建立的方法对马尔堡病毒(MARV)、登革病毒(DENV)、新疆出血热病毒(XHFV)、乙型脑炎病毒(JEV)、流感病毒(H1N1和H3N2)和猪繁殖和呼吸综合征病毒(PRRSV)E基因组RNA无非特异性扩增。本文将荧光定量RT-PCR技术用于埃博拉病毒的定量检测中,并且建立了EBOV SYBRGreenⅠ荧光定量RT-PCR检测方法。     

核酸染料Genefinder使用方法的比较

目的:使用核酸染料Genefinder检测琼脂糖凝胶中的核酸,通过比较预染样品法、胶内染色法和后染法三种染色方法的染色效果,了解该染料的染色特性,以期找到性能稳定,染色效果好的染色方法.方法:在琼脂糖凝胶电泳中,以不同的染色方法使用核酸染料Genefinder进行染色,对染色结果进行比较分析.结果:使用电泳后染色方法染色效果较好,胶内染色法次之,预染样品法效果最差.结论:核酸染料Genefinder会干扰DNA的迁移效率,因此,使用Genefinder进行电泳后染色是一种较好的染色方法.     

植物细胞壁组织化学定位染色方法和技术的比较研究

利用光学和荧光显微镜比较研究几种植物细胞壁组织化学定位染色方法和技术,结果表明：（1）硫酸消化法和硫酸氢黄连素-苯胺兰对染法研究凯氏带,对取材时间和部位要求高,建议两种方法配合使用,可相互印证是否具凯氏带;（2）苏丹7B染色法,蓝色激发光下不染色和硫酸氢黄连素-苯胺兰对染研究细胞壁栓质层3种方法中,不染色蓝色激发光下结果比苏丹7B染色法敏感显色,但苏丹7B染色法在普通光学显微镜下观察较为便捷;（3）木质化细胞壁染色方法中硫酸氢黄连素-苯胺兰对染法比间苯三酚-盐酸染色法易显色观察;（4）甲苯胺兰快速染色细胞壁取代常规苏丹Ⅲ/Ⅳ法,细胞边界和层次更清楚。     

A Comparative Study of Two Ambulatory Core Temperature Assessment Methods

Background. Given the need to identify reliable non-invasive solutions for core temperature ambulatory monitoring, the purpose of this study was to evaluate the performance of zero-heat-flux (ZHF) temperature sensor on the forehead ($T_{\mathrm{COzhf}}$) by comparing it with intestinal temperature ($T_{\mathrm{COpill}}$) in different ambient and physiological conditions.Methods. Seven trained male subjects were followed during a 45-min rest period (STA) and a 25-min self-regulated cycling exercise performed in neutral (TMP, 22.8?°C) and hot (HOT, 38.5 °C) ambient temperature.Results.$T_{\mathrm{COzhf}}$ values differed from $T_{\mathrm{COpill}}$ of ?0.23 ± 0.13 in STA, 0.15 ± 0.30 °C in TMP and $0.28\pm 0.38$?°C in HOT. The 95% limits of agreement showed an acceptable bias between $T_{\mathrm{COzhf}}$ and $T_{\mathrm{COpill}}$ in STA (±0.26?°C), but not in TMP and HOT (±0.60 and ±0.75?°C).Conclusion. The non-invasive ZHF sensor gave an accurate estimation of $T_{\mathrm{COpill}}$ in steady state but not during exercise. However, complementary results let suppose that ZHF performance is not affected by ambient conditions and could be a relevant alternative for deep body temperature measurement during whole-body heat stress.     

Sensitive Determination of Microbial Growth by Nucleic Acid Staining in Aqueous Suspension

The determination of cell numbers or biomass in laboratory cultures or environmental samples is usually based on turbidity measurements, viable counts, biochemical determinations (e.g., protein and lipid measurements), microscopic counting, or recently, flow cytometric analysis. In the present study, we developed a novel procedure for the sensitive quantification of microbial cells in cultures and most-probable-number series. The assay combines fluorescent nucleic acid staining and subsequent fluorescence measurement in suspension. Six different fluorescent dyes (acridine orange, DAPI [4′,6′-diamidino-2-phenylindole], ethidium bromide, PicoGreen, and SYBR green I and II) were evaluated. SYBR green I was found to be the most sensitive dye and allowed the quantification of 50,000 to up to 1.5 × 10⁸ Escherichia coli cells per ml sample. The rapid staining procedure was robust against interference from rRNA, sample fixation by the addition of glutaric dialdehyde, and reducing agents such as sodium dithionite, sodium sulfide, and ferrous sulfide. It worked well with phylogenetically distant bacterial and archaeal strains. Excellent agreement with optical density measurements of cell increases was achieved during growth experiments performed with aerobic and sulfate-reducing bacteria. The assay offers a time-saving, more sensitive alternative to epifluorescence microscopy analysis of most-probable-number dilution series. This method simplifies the quantification of microbial cells in pure cultures as well as enrichments and is particularly suited for low cell densities.     

核酸探针传感器的构建

依据石英振子的晶体谐振频率是其表面沉积物的函数,建立了简便、特异、敏感性达100pg,并能对受检样品相对定量的核酸杂交检测新方法,即压电晶体式核酸探针传感器,该方法的主要特点是以快速、敏感的频变信息作为核酸杂交的显示系统.     

Combined Staining by Thiolacetic Acid and Bielschowsky Methods

Tongues of mice were fixed in 10% Baker's Ca-formalin and sectioned at 50 μ with a freezing microtome. The thiolacetic acid method (Wachstein et al., J. Histochem. Cytochem., 9: 325-39) was used for motor endplates and after this cholinesterase staining, the Bielschowsky method was applied for nerve fibers. Thus, both motor endplates and nerve fibers were fully demonstrated.     

Comparative Analysis of Nucleic Acid and Protein Primary Structures

The review considers the original works on the primary structure of biopolymers carried out from 1983 to 2003. Most works were supported by the Russian program Human Genome and earlier similar Russian programs. Little-known publications of 1983–1993 and recent unpublished results are described in detail. In the field of genome comparisons, these concern the OWEN hierarchic algorithm aligning syntenic regions of two genome sequences. The resulting global alignment is obtained as an ordered chain of local similarities. Alignment of megabase sequences takes several minutes. The concept of local similarity conflicts is generalized to multiple comparisons. New algorithms aligning protein sequences are described and compared with the Smith–Waterman algorithm, which is now most accurate. The ANCHOR hierarchic algorithm generates alignments of much the same accuracy and is twice as rapid as the Smith–Waterman one. The STRSWer algorithm takes into account the secondary structures of proteins under study. With the secondary structures predicted using the PSI-PRED software for pairs of proteins having 10–30% similarity, the average accuracy of alignments generated by STRSWer is 15% higher than that achieved with the Smith–Waterman algorithm.     

2种染色方法在微核试验中的比较

DNA存储着生物体赖以生存和繁衍的遗传信息,维护DNA分子的完整性对细胞至关紧要.外界环境和生物体内部的因素都会导致DNA分子的损伤或改变,微核试验是检测外来化合物对染色体损伤作用的重要方法,已在国内外普遍应用.蜘蛛是许多农、林害虫的天敌,在生物防治中起重要作用,保护和利用蜘蛛已成为生物防治的一项重要内容.本文主要是通过2种染色方法吉姆萨染色法和吖啶橙染色法对蜘蛛血细胞进行微核试验,比较2种染色方法的优劣.     

A Spectroscopic and Thermodynamic Study of Taxol Nucleic Acid Complexes

Abstract

The interactions of natural and synthetic polynucleotide double strands with the antitumor agent paclitaxel and the oncological product “Taxol® for Injection Concentrate” (abbreviated as taxol) were examined in diluted aqueous solutions by thermal denaturation profiles (T_m), CD spectra and UV-absorption measurements. Furthermore, DNA-paclitaxel and -taxol complexes in condensed nucleic acid solutions were studied by differential scanning calorimetry. As polynucleotides alternating and homologous poly[d(AT)] and poly[d(GC)] and calf thymus DNA were used. The results point to stabilizing interactions of paclitaxel to AT nucleotides, whereas in the presence of GC base pairings no interaction took place. Thereby the interaction to homologous (dA)-(dT)-tracts seems to be preferred.