Benefits of Turbid River Plume Habitat for Lake Erie Yellow Perch (Perca flavescens) Recruitment Determined by Juvenile to Larval Genotype Assignment

Nutrient-rich, turbid river plumes that are common to large lakes and coastal marine ecosystems have been hypothesized to benefit survival of fish during early life stages by increasing food availability and (or) reducing vulnerability to visual predators. However, evidence that river plumes truly benefit the recruitment process remains meager for both freshwater and marine fishes. Here, we use genotype assignment between juvenile and larval yellow perch (Perca flavescens) from western Lake Erie to estimate and compare recruitment to the age-0 juvenile stage for larvae residing inside the highly turbid, south-shore Maumee River plume versus those occupying the less turbid, more northerly Detroit River plume. Bayesian genotype assignment of a mixed assemblage of juvenile (age-0) yellow perch to putative larval source populations established that recruitment of larvae was higher from the turbid Maumee River plume than for the less turbid Detroit River plume during 2006 and 2007, but not in 2008. Our findings add to the growing evidence that turbid river plumes can indeed enhance survival of fish larvae to recruited life stages, and also demonstrate how novel population genetic analyses of early life stages can contribute to determining critical early life stage processes in the fish recruitment process.     

Interannual Recruitment Dynamics for Resident and Transient Marsh Species: Evidence for a Lack of Impact by the Macondo Oil Spill

The emulsification of oil at the Deepwater Horizon (DWH) well head relegated a large proportion of resultant hydrocarbon plumes to the deep sea, facilitated the incorporation of oil droplets into microbial and planktonic food web, and limited the severity of direct, wetland oiling to coastal Louisiana. Nevertheless, many transient fish and invertebrate species rely on offshore surface waters for egg and larval transport before settling in coastal habitats, thereby potentially impacting the recruitment of transient species to coastal nursery habitats quite distant from the well site. We compared the utilization of salt-marsh habitats by transient and resident nekton before and after the DWH accident using data obtained from an oyster reef restoration project in coastal Alabama. Our sampling activities began in the summer preceding the DWH spill and continued almost two years following the accident. Overall, we did not find significant differences in the recruitment of marsh-associated resident and transient nekton in coastal Alabama following the DWH accident. Our results, therefore, provide little evidence for severe acute or persistent oil-induced impacts on organisms that complete their life cycle within the estuary and those that spent portions of their life history in potentially contaminated offshore surface waters prior to their recruitment to nearshore habitats. Our negative findings are consistent with other assessments of nekton in coastal vegetated habitats and bolster the notion that, despite the presence of localized hydrocarbon enrichments in coastal habitats outside of Louisiana the most severe oil impacts were relegated to coastal Louisiana and the deep sea. Analyzing all the information learned from this accident will undoubtedly provide a synthesis of what has or has not been affected in the Northern Gulf of Mexico, which when put in context with oil spill studies elsewhere should improve our ability to avert and manage the negative consequences of such accidents.     

Long-Term Changes in the Distributions of Larval and Adult Fish in the Northeast U.S. Shelf Ecosystem

Many studies have documented long-term changes in adult marine fish distributions and linked these changes to climate change and multi-decadal climate variability. Most marine fish, however, have complex life histories with morphologically distinct stages, which use different habitats. Shifts in distribution of one stage may affect the connectivity between life stages and thereby impact population processes including spawning and recruitment. Specifically, many marine fish species have a planktonic larval stage, which lasts from weeks to months. We compared the spatial distribution and seasonal occurrence of larval fish in the Northeast U.S. Shelf Ecosystem to test whether spatial and temporal distributions changed between two decades. Two large-scale ichthyoplankton programs sampled using similar methods and spatial domain each decade. Adult distributions from a long-term bottom trawl survey over the same time period and spatial area were also analyzed using the same analytical framework to compare changes in larval and adult distributions between the two decades. Changes in spatial distribution of larvae occurred for 43% of taxa, with shifts predominately northward (i.e., along-shelf). Timing of larval occurrence shifted for 49% of the larval taxa, with shifts evenly split between occurring earlier and later in the season. Where both larvae and adults of the same species were analyzed, 48% exhibited different shifts between larval and adult stages. Overall, these results demonstrate that larval fish distributions are changing in the ecosystem. The spatial changes are largely consistent with expectations from a changing climate. The temporal changes are more complex, indicating we need a better understanding of reproductive timing of fishes in the ecosystem. These changes may impact population productivity through changes in life history connectivity and recruitment, and add to the accumulating evidence for changes in the Northeast U.S. Shelf Ecosystem with potential to impact fisheries and other ecosystem services.     

Functional reorganization of marine fish nurseries under climate warming

While climate change is rapidly impacting marine species and ecosystems worldwide, the effects of climate warming on coastal fish nurseries have received little attention despite nurseries’ fundamental roles in recruitment and population replenishment. Here, we used a 26‐year time series (1987–2012) of fish monitoring in the Bay of Somme, a nursery in the Eastern English Channel (EEC), to examine the impacts of environmental and human drivers on the spatial and temporal dynamics of fish functional structure during a warming phase of the Atlantic Multidecadal Oscillation (AMO). We found that the nursery was initially dominated by fishes with r‐selected life‐history traits such as low trophic level, low age and size at maturity, and small offspring, which are highly sensitive to warming. The AMO, likely superimposed on climate change, induced rapid warming in the late 1990s (over 1°C from 1998 to 2003), leading to functional reorganization of fish communities, with a roughly 80% decline in overall fish abundance and increased dominance by K‐selected fishes. Additionally, historical overfishing likely rendered the bay more vulnerable to climatic changes due to increased dominance by fishing‐tolerant, yet climatically sensitive species. The drop in fish abundance not only altered fish functional structure within the Bay of Somme, but the EEC was likely impacted, as the EEC has been unable to recover from a regime shift in the late 1990s potentially, in part, due to failed replenishment from the bay. Given the collapse of r‐selected fishes, we discuss how the combination of climate cycles and global warming could threaten marine fish nurseries worldwide, as nurseries are often dominated by r‐selected species.     

Marine dock pilings foster diverse,native cryptobenthic fish assemblages across bioregions

Anthropogenic habitats are increasingly prevalent in coastal marine environments. Previous research on sessile epifauna suggests that artificial habitats act as a refuge for nonindigenous species, which results in highly homogenous communities across locations. However, vertebrate assemblages that live in association with artificial habitats are poorly understood. Here, we quantify the biodiversity of small, cryptic (henceforth “cryptobenthic”) fishes from marine dock pilings across six locations over 35° of latitude from Maine to Panama. We also compare assemblages from dock pilings to natural habitats in the two southernmost locations (Panama and Belize). Our results suggest that the biodiversity patterns of cryptobenthic fishes from dock pilings follow a Latitudinal Diversity Gradient (LDG), with average local and regional diversity declining sharply with increasing latitude. Furthermore, a strong correlation between community composition and spatial distance suggests distinct regional assemblages of cryptobenthic fishes. Cryptobenthic fish assemblages from dock pilings in Belize and Panama were less diverse and had lower densities than nearby reef habitats. However, dock pilings harbored almost exclusively native species, including two species of conservation concern absent from nearby natural habitats. Our results suggest that, in contrast to sessile epifaunal assemblages on artificial substrates, artificial marine habitats can harbor diverse, regionally characteristic assemblages of vertebrates that follow macroecological patterns that are well documented for natural habitats. We therefore posit that, although dock pilings cannot function as a replacement for natural habitats, dock pilings may provide cost‐effective means to preserve native vertebrate biodiversity, and provide a habitat that can be relatively easily monitored to track the status and trends of fish biodiversity in highly urbanized coastal marine environments.     

High species richness of early stages of fish in a locality of the Mesoamerican Barrier Reef System: a small-scale survey using different sampling gears

The Mesoamerican Barrier Reef System (MBRS) contains a diverse array of coastal habitats that are critical for the survival of the early stages of reef fish; however, the knowledge on the abundance and distribution of the early stages of coastal fishes is still limited in this region. This study investigated the species richness of larval and juvenile fishes using a combination of a sled net, standard plankton net, and a nightlight lift-net; these were deployed simultaneously at Bacalar Chico, a site on the MBRS within the protected “Parque Nacional Arrecifes de Xcalak” (PNAX). We collected 53 families and 118 species of larval and juvenile fishes in a small area of about 3 km². This species diversity of early life-history stages is greater than previously found in surveys on the MBRS. Each gear caught a number of species exclusively, so combined sampling with the three methods provided a much fuller picture of the local larval and juvenile fish assemblage. A species-accumulation model estimated that the samples likely represented 84% of the total assemblage. Many species caught were represented predominantly by newly settled juveniles, underscoring the importance of this coastal habitat for settlement of many ecologically and economically important fish species. This information is expected to improve the conservation and management strategies in the fragile PNAX coastal zones by providing additional information based on original field data to raise awareness among managers about the ecological relevance of these coastal habitats. This study provides encouraging evidence that the PNAX is a well-suited natural protected area to preserve a critical fish habitat in a hotspot of marine biodiversity.     

Elevated CO2 affects embryonic development and larval phototaxis in a temperate marine fish

As an effect of anthropogenic CO₂ emissions, the chemistry of the world's oceans is changing. Understanding how this will affect marine organisms and ecosystems are critical in predicting the impacts of this ongoing ocean acidification. Work on coral reef fishes has revealed dramatic effects of elevated oceanic CO₂ on sensory responses and behavior. Such effects may be widespread but have almost exclusively been tested on tropical reef fishes. Here we test the effects elevated CO₂ has on the reproduction and early life history stages of a temperate coastal goby with paternal care by allowing goby pairs to reproduce naturally in an aquarium with either elevated (ca 1400 μatm) CO₂ or control seawater (ca 370 μatm CO₂). Elevated CO₂ did not affect the occurrence of spawning nor clutch size, but increased embryonic abnormalities and egg loss. Moreover, we found that elevated CO₂ significantly affected the phototactic response of newly hatched larvae. Phototaxis is a vision‐related fundamental behavior of many marine fishes, but has never before been tested in the context of ocean acidification. Our findings suggest that ocean acidification affects embryonic development and sensory responses in temperate fishes, with potentially important implications for fish recruitment.     

Recruitment of coral reef fishes along a cross-shelf gradient in the Red Sea peaks outside the hottest season

Knowledge on the early life history, ecology, and biology of marine species is crucial for future projections of the resilience of coral reef ecosystems and for adequate management strategies. A fundamental component of population dynamics is the recruitment of new individuals, and in some marine populations, this may be a limiting factor. Recruitment peaks of coral reef fishes commonly occur during the warmer months of the year in many subtropical and temperate locations worldwide. In the Red Sea, very little is known about the influence of temperature on reproductive patterns of coral reef fishes and studies on recruitment are missing. The Red Sea is one of the hottest and most isolated tropical seas in the world. We hypothesized that sea surface temperatures (SSTs) during the Red Sea’s hottest season may exceed the optimum for successful recruitment of some coral reef fishes, which therefore has to occur during other, cooler seasons, unlike recruitment among coral reef ecosystems around the world. We identified taxa among fish recruits by matching mitochondrial DNA sequences (using COI, commonly known as “barcoding”) and assessed potential biological and environmental drivers of recruitment. We studied three reefs located along a cross-shelf gradient for 12 consecutive months in the central Red Sea to capture seasonal changes in biotic and abiotic parameters along this gradient. Our results indicated that recruitment peaks did not occur during the hottest SSTs for most taxa, especially at the hottest inshore and mid-shelf reefs, and identified fish recruitment to be mainly and strongly correlated with the biomass of planktonic invertebrates. Moreover, temporal patterns of fish recruitment differed within and among taxonomic families among the reefs.

     

The icthyofauna of the Mhlathuze coastal lakes: some preliminary results

The fish faunas of the four Mhlathuze coastal lakes and the lower river comprise a diverse assortment of over fifty marine, estuarine and freshwater species. Three freshwater species are endemic to KwaZulu-Natal and nine estuarine species are endemic to southern Africa. Five species are of conservation significance. Species numbers in Lakes Mzingazi and Cubhu are similar historically and both lakes served as secondary nursery habitats for estuarine associated fishes. This role has been impacted by the construction of weirs at their outlets which prevent successful recruitment of estuarine species, especially during drought years when lake water levels are low. The fish faunas of Lakes Nsezi and Mangeza are depauperate and lack marine or estuarine components. In order that these systems fulfil their potential function as secondary nursery habitats to many estuarine fish species, minimum lake water levels must be set to ensure sufficient outflows at proposed fish ladders during critical spawning and migration times.     

Dynamics of the shallow-water fish assemblage of the Patos Lagoon estuary (Brazil) during cold and warm ENSO episodes

In southern Brazil, cold ( La Niña ) and warm ( El Niño ) episodes of the El Niño Southern Oscillation (ENSO) phenomenon cause drought and high rainfall, respectively. The low precipitation and freshwater outflow associated with La Niña during 1995–1996 were associated with an increase in the abundance of marine species in the Patos Lagoon estuary. During the 1997–1998 El Niño , high precipitation and river discharge were associated with low abundance of marine species in the estuary. ANOVA results showed a higher abundance during La Niña than El Niño for estuarine resident (RES) and estuarine dependent (DEP) fishes. During La Niña catch per unit of effort (CPUE) of RES increased from the marine to estuarine area, but during El Niño CPUE increased at the marine area and diminished during summer and autumn in some estuarine sites. DEP fishes had an opposite abundance pattern. During La Niña , these fishes were abundant at the coastal marine area and along some estuarine sites, but during El Niño , CPUE remained almost the same at the marine area but dropped along some estuarine sites. These different abundance patterns for dominant fish groups yielded a positive interaction between stations and climatic events. With higher river discharge and the consequent decline of dominant euryhaline fishes, such as Mugil platanus and Atherinella brasiliensis , freshwater species increased in abundance and richness in the shallow waters of the stuary. The ENSO phenomenon influences precipitation and estuarine salinity in southern Brazil and thereby seems to have a strong influence on recruitment, immigration, and emigration dynamics of fish species living within and adjacent to estuarine habitats.     

Food of anadromous brown trout at sea

The food of migratory Salmo trutta in coastal marine waters along the Norwegian Skagerrak coast varied significantly with age, season and habitat of the fish. The main prey categories in terms of frequency of occurrence were fishes followed by crustaceans, surface insects and polychaetes. Seasonal variation in diet and within habitats was found, supporting the view that brown trout is an opportunistic feeder. An ontogenetic niche shift was observed with post-smolts feeding on inshore and shallow water prey communities, while larger brown trout fed mainly on pelagic fishes.     

Role of habitat in mediating mortality during the post-settlement transition phase of temperate marine fishes

The transition phase describes a distinct post-settlement stage associated with the recruitment to benthic habitats by pelagic life stages. The habitat shift is often accompanied by feeding shifts and metamorphosis from larval to juvenile phases. Density-dependent settlement, growth and mortality are often the major factors controlling recruitment success of this phase. Habitat use also becomes more pronounced after settlement. The role of habitat-mediated post-settlement mortality is elucidated by focusing on the early life history of Atlantic cod ( Gadus morhua ) and cunner ( Tautogolabrus adspersus ) in the north-west Atlantic. In these species, settlement can occur over all bottom types, but habitat-specific differences in post-settlement mortality rates combined with size and priority at settlement effects on growth and survival determine recruitment and eventual year-class strength. These results and those from other temperate marine fish species along with work on tropical reef species emphasize the generality of habitat-based density-dependent mortality during the transition phase and its potential for population regulation. These results have implications for fisheries management and can be used to outline a procedure to assist managers in identifying and managing essential transitional habitats including the potential role of marine protected areas in habitat conservation.     

Sea surface temperature dictates movement and habitat connectivity of Atlantic cod in a coastal fjord system

While movements of organisms have been studied across a myriad of environments, information is often lacking regarding spatio‐seasonal patterning in complex temperate coastal systems. Highly mobile fish form an integral part of marine food webs providing linkages within and among habitats, between patches of habitats, and at different life stages. We investigated how movement, activity, and connectivity patterns of Atlantic cod (Gadus morhua) are influenced by dynamic environmental conditions. Movement patterns of 39 juvenile and subadult Atlantic cod were assessed in two coastal sites in the Swedish Skagerrak for 5 months. We used passive acoustic telemetry and network analysis to assess seasonal and spatial movement patterns of cod and their relationships to different environmental factors, using statistical correlations, analysis of recurrent spatial motifs, and generalized linear mixed models. Temperature, in combination with physical barriers, precludes significant connectivity (complex motifs) within the system. Sea surface temperature had a strong influence on connectivity (node strength, degree, and motif frequency), where changes from warmer summer waters to colder winter waters significantly reduced movement activity of fish. As the seasons changed, movement of fish gradually decreased from large‐scale (km) linkages in the summer to more localized movement patterns in the winter (limited to 100s m). Certain localized areas, however, were identified as important for connectivity throughout the whole study period, likely due to these multiple‐habitat areas fulfilling functions required for foraging and shelter. This study provides new knowledge regarding inshore movement dynamics of juvenile and subadult Atlantic cod that use complex, coastal fjord systems. The findings show that connectivity, seasonal patterns in particular, should be carefully considered when selecting conservation areas to promote marine stewardship.     

Dispersal patterns of coastal fish: implications for designing networks of marine protected areas

Information about dispersal scales of fish at various life history stages is critical for successful design of networks of marine protected areas, but is lacking for most species and regions. Otolith chemistry provides an opportunity to investigate dispersal patterns at a number of life history stages. Our aim was to assess patterns of larval and post-settlement (i.e. between settlement and recruitment) dispersal at two different spatial scales in a Mediterranean coastal fish (i.e. white sea bream, Diplodus sargus sargus) using otolith chemistry. At a large spatial scale (～200 km) we investigated natal origin of fish and at a smaller scale (～30 km) we assessed "site fidelity" (i.e. post-settlement dispersal until recruitment). Larvae dispersed from three spawning areas, and a single spawning area supplied post-settlers (proxy of larval supply) to sites spread from 100 to 200 km of coastline. Post-settlement dispersal occurred within the scale examined of ～30 km, although about a third of post-settlers were recruits in the same sites where they settled. Connectivity was recorded both from a MPA to unprotected areas and vice versa. The approach adopted in the present study provides some of the first quantitative evidence of dispersal at both larval and post-settlement stages of a key species in Mediterranean rocky reefs. Similar data taken from a number of species are needed to effectively design both single marine protected areas and networks of marine protected areas.     

A recent marine ancestry for diadromous fishes? Sometimes yes,but mostly no!

Synopsis Diadromy in its three forms (anadromy, catadromy and amphidromy) necessarily involves fish spending part of their lives in the sea. It is not uncommon contention that diadromous fish have a recent marine ancestry and that they are in the process of moving from a marine to a freshwater lifestyle. However, analysis of the distribution of diadromy in fishes suggests that, for most species, it is an ancient life history style though, for a few, a recent marine ancestry seems plausible. In general, there is no reason to consider diadromy anything but a stable and successful life history style, and no reason to regard it as transitional between marine and freshwater habitats.Invited Editorial     

The evolution of diadromy in fishes (revisited) and its place in phylogenetic analysis

Diadromy is a term used to describe migrations of fishes between fresh waters and the sea; these migrations are regular, physiologically mediated movements which occur at predictable life history phases in each diadromous species, they involve most members of a species' populations, and they are usually obligatory. Around 250 fish species are regarded as diadromous. A review of the life history strategies amongst families of fishes that include diadromous species provides little support for a suggested scenario for their evolution that involves: (1) evolution of anadromy via amphidromy from fishes of marine origins, and (2) evolution of catadromy through amphidromy from fishes of freshwater origins, even though these scenarios seem intuitively reasonable. The various forms of diadromy appear to have had multiple independent origins amongst diverse fish groups. There is increasing confidence that behavioural characteristics of animals are heuristic in gener ating and interpreting phylogenies. However, examination of fishes shows wide variability of diadromous life histories within closely related families and genera, within species, and there is even ontogenetic variation in patterns of behaviour by individual fish. In addition, there is multiple loss of diadromy in many diadromous fish species in which the life history becomes restricted to fresh waters. This variation suggests that diadromy is a behavioural character of dubious worth in determining phylogenetic relationships. Moreover, it appears to have been an ancestral condition in some fish families, such as Anguillidae, Salmonidae, Galaxiidae, Osmeridae, and others, and perhaps in the whole salmonoid/osmeroid/galaxioid complex of families. This, too, makes diadromy of dubious worth in phylogenetic analysis     

Characteristics of Settling Coral Reef Fish Are Related to Recruitment Timing and Success

Many marine populations exhibit high variability in the recruitment of young into the population. While environmental cycles and oceanography explain some patterns of replenishment, the role of other growth-related processes in influencing settlement and recruitment is less clear. Examination of a 65-mo. time series of recruitment of a common coral reef fish, Stegastes partitus, to the reefs of the upper Florida Keys revealed that during peak recruitment months, settlement stage larvae arriving during dark lunar phases grew faster as larvae and were larger at settlement compared to those settling during the light lunar phases. However, the strength and direction of early trait-mediated selective mortality also varied by settlement lunar phase such that the early life history traits of 2–4 week old recruit survivors that settled across the lunar cycle converged to more similar values. Similarly, within peak settlement periods, early life history traits of settling larvae and selective mortality of recruits varied by the magnitude of the settlement event: larvae settling in larger events had longer PLDs and consequently were larger at settlement than those settling in smaller pulses. Traits also varied by recruitment habitat: recruits surviving in live coral habitat (vs rubble) or areas with higher densities of adult conspecifics were those that were larger at settlement. Reef habitats, especially those with high densities of territorial conspecifics, are more challenging habitats for young fish to occupy and small settlers (due to lower larval growth and/or shorter PLDs) to these habitats have a lower chance of survival than they do in rubble habitats. Settling reef fish are not all equal and the time and location of settlement influences the likelihood that individuals will survive to contribute to the population.     

基于耳石元素微化学的江苏吕泗近岸小黄鱼生境履历重建

利用电子显微探针元素分析技术,对江苏吕泗近岸海域小黄鱼矢耳石的Sr和Ca微化学特征进行了研究.结果表明: Sr含量在小黄鱼耳石的矢状面上呈非均匀分布,总体为核心部位高,其余部分明显降低.核心高Sr区域的Sr/Ca比值为(7.10±1.00),其余部分为(4.79±1.01),两者差异极显著.后者部分个体存在Sr含量更低的区域,Sr/Ca比值为(3.51±0.76).基于这些结果重建了吕泗近岸小黄鱼的生境履历： 它们在孵化及初期发育阶段生活在高盐度生境,随后的生长和发育过程则会洄游至盐度稍低的生境;部分个体的早期发育阶段还会选择利用更低盐度的生境.     

Patterns of ecological diversification in thelodonts

Here we explore the spatial, temporal and phylogenetic patterns of ecological diversification for the entire clade of thelodonts, one of the earliest groups of vertebrates and longest lasting of the Palaeozoic agnathans in the fossil record. Parsimony and maximum‐likelihood methods are used to reconstruct ancestral states of their geographical distributions, habitats and lifestyles. Our results support the concept that thelodonts originated during the Middle?–Late Ordovician probably in marine open waters of Laurasia, with a demersal lifestyle on hard substrates being the ancestral condition for the whole clade. Later, thelodonts underwent a complex ecological diversification and palaeobiogeographical history, comparable in many aspects to those of some major groups of living fishes. Different modes of life evolved repeatedly and a wide range of habitats were colonized by distinct groups, including deep waters and brackish marine and/or freshwater environments. Diadromous strategies presumably appeared on nine different occasions. The palaeobiogeographical history of thelodonts reveals significant differences in the dispersal potential of some major groups. Dispersal of thelodontiforms entailed displacements over long distances and the crossing of deep‐water biogeographical barriers, whereas those of furcacaudiforms were always limited to areas interconnected by shallow platforms. We propose that the evolution of pelagic larval stages in thelodontiforms might explain this biogeographical pattern and could satisfactorily account for the greater evolutionary success of this group.