Species composition,relative abundance and habitat association of small mammals along the altitudinal gradient of Jiren Mountain,Jimma, Ethiopia

To document the species composition, relative abundance and habitat association of small mammals, wet and dry season surveys were conducted along the altitudinal gradient of Jiren Mountain, Jimma area, Ethiopia. Sherman traps were used to capture small mammals from the six habitats: wetland, mixed plantation, open shrub, eucalyptus plantation, montane grassland and coffee plantation. The 393 trap nights, from the six habitat types, yielded 106 individual small mammals of tweleve species. The trapped rodents were Lophuromys flavopunctatus, Stenocephalemys albipes, Desmomys harringtoni, Mus mahomet, Lemniscomys barbarous, L. striatus, Tachyoryctes splendens, Mastomys natalensis and the insectivores Crocidura fumosa and C. turba. Two species of rodents Hystrix cristata and Helioscuirus gambianus were observed. Lophuromys flavopunctatus and S. albipes contributed 83.8% of the total capture. L. flavopunctatus, S. albipes and D. harringtoni were distributed in all habitats and gradients. T. splendens was captured from montane habitat, while the zebra mice were associated with the lower altitude habitats. Lophuromys flavopunctatus and M. natalensis extended their range deep into the coffee plantation habitats. Uncontrolled vegetation exploitation of the mountains for timber production and fire wood collection are the major threats. Conservation of the area to reduce the anthropogenic pressure is essential.     

Small mammals of the Bale Mountains, Ethiopia

A sample of 535 small mammals, caught over a range of altitudes from 1500 to 4000 m in the Bale Mountains, on various expeditions from December 1971 to August 1986, enables the altitudinal zonation of the species to be delimited. The most abundant species, Lophuromys flavopunctatus, ranged from near the lower tree line at 1550 m, right up through the forested zones and onto the Afro-alpine moorland at 3900 m. The endemic Praomys albipes also ranged through the forest from 1550 to 3200 m, but was replaced in open habitats between 2400 and 3900 m by Stenocephalemys griseicauda and between 3000 and 4000 m by S. albocaudata, which was relatively more abundant than its congener at higher altitudes. Other moorland species, including Crocidura fumosa, Otomys typus, Lophuromys melanonyx and Arvicanthis blicki were also commonest at 3800–4000 m, but, like the Stenocephalemys spp., penetrated to lower altitudes in open habitats. Mus mahomet was confined to lower altitudes (1510–3000 m) and open habitats, apparently replaced by Mus triton, not previously recorded from Ethiopia, in forested habitats at middle altitudes (1950–2400 m).     

Species diversity and abundance of small mammals in Nechisar National Park,Ethiopia

Species diversity and abundance of small mammals were studied in Nechisar National Park, Ethiopia, during August 2008 – March 2009. Twenty species of rodents and four species of insectivores were recorded from the study area. Mastomys natalensis (17.37%), Arvicanthis dembeensis (17.09%), Mastomys erythroleucus (8.90%), Stenocephalemys albipes (8.76%), Arvicanthis niloticus (8.19%), Acomys cahirinus (7.34%), Lemniscomys striatus (6.92%), Gerbilliscus nigricauda (6.21%), Grammomys dolichurus (3.67%), Gerbilliscus robusta (2.12%), Mus proconodon (1.98%), Mus mahomet (1.41), Dendromus melanotis (1.27%), Arvicanthis abyssinicus (1.13%), Mus musculus (0.99%), Praomys fumatus (0.85%), Xerus erythropus (0.85%), Lemniscomys barbarus (0.71%), Mus tenellus (0.71%) and Otomys typus (0.28%) were the rodents and their respective relative abundance in the study area. Crocidura olivieri (1.55%), Crocidura fumosa (0.85%), Crocidura bicolor (0.57%) and Elephantulus rufescens (0.28%) were the insectivores recorded with their respective relative abundance. Mastomys natalensis was the most abundant and O. typus and E. rufescens were the least (two each). Diversity of small mammals ranged from 2.299 to 2.625 with an average of 2.412. The highest small mammal diversity was in grasslands and the lowest was in Lake Chamo shore. Small mammal density varied from 5 to 43 ha^?1 and biomass varied from 244 to 2559 g ha^?1 with significant changes in relation to seasons and habitats.     

Species composition,abundance and habitat association of rodents and insectivores from Chilalo–Galama Mountain range,Arsi, Ethiopia

A study on the ecology of rodents and insectivores on Mount Chilalo and the Galama Mountain range was conducted during August, 2007–April, 2008. Study grids were marked in nine randomly selected habitats. Sherman live traps and snap traps were used to capture the small mammals. A total of 2525 (including recaptures) individual rodents and insectivores were captured in 5488 (Sherman) and 1590 (snap) trap‐nights. Among the live‐trapped animals, 2037 (96.2%) and 80 (3.8%) were rodents and insectivores, respectively, that comprised 17 species. These were as follows: Arvicanthis abyssinicus, Arvicanthis blicki, Arvicanthis dembeensis, Lophuromys flavopunctatus, Lophuromys melanonyx, Mastomys natalensis, Mus mahomet, Otomys typus, Rattus rattus, Stenocephalemys albipes, Stenocephalemys albocaudata, Stenocephalemys griseicauda, Crocidura glassi, Crocidura flavescens and Crocidura thalia. Tachyoryctes splendens and Hystrix cristata were sighted but not captured. Endemics to Ethiopia constituted 60% of the trapped small mammals. Lophuromys flavopunctatus was the most abundant and widely distributed rodent species, while M. mahomet was the least. The altitudes between 3301 and 3400 m asl had the highest species composition and abundance although it is second in number of catches per trap‐nights. The majority of rodents and insectivores were associated with montane forest habitat, whereas the least were in the shrubland. Anthropogenic effects were witnessed affecting the distribution of small mammals.     

Diversity of rodents and shrews along an elevational gradient in Bwindi Impenetrable National Park, south-western Uganda

Small mammal species diversity in the major vegetation zones of Bwindi Impenetrable National Park is discussed in relation to altitude. Species richness of the small mammals was found to decrease with an increase in altitude. The main factors accounting for the observed diversity are the wide altitudinal variation and a complex array of vegetation types. Sixty‐seven species of rodents and shrews were found to exist in the Park; 47 of which were rodents and 20 shrews. Of these, 26 species are new to the Bwindi Park list. Three species have probably not been described before. The study found 10 species of small mammals to be Albertine Rift endemics. Three genera are recorded in Uganda for the first time: Rwenzorisorex, Suncus and Paracrocidura. Five species are new records for East Africa. These are Crocidura stenocephala, Lophuromys rahmi, L. medicaudatus, Paracrocidura maxima and Hylomyscus aeta. Because of the high endemism of plants, butterflies, birds and now of small mammal species, Bwindi forest is a unique biodiversity hotspot and is among the highest conservation priorities in the Albertine Rift.     

Ecology of a typical West African Sudanian savannah rodent community

The small‐mammal community of a typical Sudanian savannah area of south‐eastern Senegal was studied by way of intensive sampling at the beginning (July) and at the end (November) of the rainy season. A total of 5931 trapnights and 200 pitfallnights yielded 767 small mammals, including 757 rodents of 12 species, as well as a few shrews and hedgehogs. Accumulation curve indicated that the rodent community was well sampled. Murine rodents were far more numerous than gerbilline rodents, and among them, Mastomys erythroleucus was the dominant species, being caught in high numbers in all habitats. Arvicanthis niloticus and Praomys daltoni were also abundant, followed by Mastomys natalensis and Gerbilliscus guineae. Abundances were high at the beginning of the rainy season when reproductive activity was low in all species. At the end of the rainy season, murine rodents were actively involved in reproduction, while gerbilline rodents were at their lowest density. Significant changes in relative abundance among habitats (including human dwellings) were observed between periods in some species, suggesting seasonal trends in habitat preferences. This may help species coexistence in this species‐rich rodent community, in an area likely to be submitted to significant habitat alterations in the years to come.     

Barcoding,molecular taxonomy,and exploration of the diversity of shrews (Soricomorpha: Soricidae) on Mount Nimba (Guinea)

We tested the efficiency of cytochrome oxidase I (COI)‐barcoding as a taxonomic tool to discriminate and identify sympatric shrew species on Mount Nimba (Guinea). We identified 148 specimens at the species level using morphological characters and comparison with type specimens, including several taxa from Mount Nimba. We identified ten morphospecies and tested aspects of genetic diversity and monophyly using genetic data from three mitochondrial (16S, cytochrome b, and COI) and one nuclear marker (the breast cancer gene, BRCA). Nine morphospecies were validated under the phylogenetic and genetic species concepts, including the recently diverged species Crocidura buettikoferi, Crocidura theresae, and Crocidura grandiceps. Under the same concepts, our analyses revealed the presence of two cryptic species amongst animals identified as Crocidura muricauda. We then tested the efficiency of barcoding thanks to commonly used phenetic methods, with the 148 specimens representing 11 potentially valid species based on morphological and molecular data. We show that COI‐barcoding is a powerful tool for shrew identification and can be used for taxonomic surveys. The comparison of genetic divergence values shows the presence of a barcoding gap (i.e. difference between the highest intraspecific and the lowest interspecific genetic divergence values). Given that only a few COI sequences are available for Afrotropical shrews, our work is an important step forward toward their enrichment. We also tested the efficiency of the three other sequenced markers and found that cytochrome b is as efficient as COI for barcoding shrews. © 2012 The Linnean Society of London, Zoological Journal of the Linnean Society, 2012, 166 , 672–687.     

Demography and habitat selection of small mammals on Zomba Plateau, Malawi

Small mammals were studied in tow montane grassland-forest areas on Zomba Plateau (1900m), Malawi, in 1984–85. Seasonal changes in numbers, age-structure and reproduction are given for the three commonest species. Mus triton (36%), Praomys delectorum (29%), and Lophuromys flavopunctatus (19%). Total population numbers for L. flavopunctatus and P. delectorum were lowest at the end of the dry season, and highest at the end of the wet season; reproduction is seasonal, and most young are born in the wet season. Mus triton did not exhibit such large fluctuations in numbers, and reproduced in both wet and early dry seasons. Each species was found in several habitats, but L. flavopunctatus showed a strong preference for unburnt grasslands, M. triton for burnt grasslands, and P. delectorum for forest and tangle habitats. Each species had a different population survival rate, and few individuals survived for more than 5–6 months. Trapped-revealed home ranges were about 3100 m² for L. flavopunctatus , and 2700 m² for M. triton . Monthly changes in grass biomass, cover and height were recorded and related to the numbers of small mammals. General features of the small mammals of African mountains, based on data from the Drakensberg, Ethiopia and this study. are presented.     

Differences in abundance and species richness between shrews and rodents along an elevational gradient in the Udzungwa Mountains,Tanzania

Small mammals (shrews and rodents) were surveyed along an elevational transect in the Udzungwa Scarp Forest Reserve, in the Udzungwa Mountains, Tanzania. Trap lines and pitfall lines were installed at 600, 910, 1460, and 2000 m a.s.l. In a total of 10341 sample nights (7448 trap-nights and 2893 bucket-nights) 343 specimens (148 shrews, 205 rodents) were captured representing 9 shrew and 14 rodent species for a total of 23 species. While overall species diversity generally increased with elevation, this pattern was not constant for each group sampled. For rodents, both species richness and abundance were lowest at 600 m and greatest at 2000 m a.s.l., and were significantly correlated with elevation. While the highest species number and abundance for shrews was at 2000 m, there was no correlation of these two values with elevation. Rainfall appears to have affected the capture of shrews, but not rodents, and capture success of individual buckets and traps indicated a lack of capture independence. Eastern Arc endemics such asCrocidura desperata Hutterer, Jenkins and Verheyen, 1991 andMyosorex kihaulei Stanley and Hutterer, 2000 were more abundant at 2000 m a.s.l., than at lower elevations. Implications of results of this survey for analyses of future biotic surveys are discussed.     

Distribution and coexistence of shrews in patchy landscapes: A field test of multiple hypotheses

Despite the important role of shrews (Soricomorpha: Soricidae) in the functioning of ecosystems, as predators and prey, the effects of habitat loss and fragmentation on this guild of mammals are still unclear. We studied the distribution of 5 species (the greater white toothed shrew Crocidura leucodon; the lesser white toothed shrew Crocidura suaveolens; the pigmy shrew Sorex minutus; the Appennine shrew Sorex samniticus and the Etruscan shrew Suncus etruscus) in a fragmented landscape in central Italy.Shrews were trapped with pitfall traps made from plastic water bottles, the number of traps increased with patch size. A total of 170 individuals, of 5 species of shrews were captured. Shrews were widely distributed in our study area, however patch occupancy was determined mainly by vegetation and geometrical characteristics of the patches. Our data supports the hypotheses that patterns of habitat selection and the dynamics of seasonal abundance (habitat and temporal partitioning between similarly sized species) reduce competitive pressure, thus allowing coexistence of shrews in relatively species-rich assemblages, for such small amounts of habitat. The most important outcome of our results is the crucial role played by vegetation structure in determining distribution patterns. These results strongly suggest that measurements of the vegetation structure of habitat patches should always be included as explanatory variables when studying the distribution of shrews in fragmented landscapes.     

Tick-borne zoonotic bacteria in wild and domestic small mammals in northern Spain

The prevalence and diversity of tick-borne zoonotic bacteria (Borrelia spp., Anaplasma phagocytophilum, Coxiella burnetii, and spotted fever group rickettsiae) infecting 253 small mammals captured in the Basque Country (Spain) were assessed using PCR and reverse line blot hybridization. Trapping sites were selected around sheep farms (study 1, 2000 to 2002) and recreational parks (study 2, 2003 to 2005). The majority of the studied mammals (162) were wood mice (Apodemus sylvaticus), but six other different species were also analyzed: yellow-necked mice (Apodemus flavicollis), shrews (Crocidura russula and Sorex coronatus), bank voles (Clethrionomys glareolus), domestic mice (Mus domesticus), and moles (Talpa europaea). The results showed an infection rate ranging from 10.7% to 68.8%, depending on the small mammal species. One C. russula shrew and one A. sylvaticus mouse gave positive reactions for A. phagocytophilum, and C. burnetii was detected in two domestic mice and one A. sylvaticus mouse in a farm. The DNA of Borrelia spp. was detected in 67 animals (26.5%), most of them presenting positive hybridization with the probe for Borrelia sp. strain R57, the new Borrelia species previously detected in small mammals in our region. Furthermore, a second PCR and reverse line blot hybridization specific for B. burgdorferi sensu lato revealed the presence of Borrelia afzelii in 6.3% of C. glareolus voles and 14.3% of S. coronatus shrews. All small mammals were negative for spotted fever group rickettsiae. These results highlight the relevance of small mammals as reservoirs of some zoonotic bacteria.     

Community ecology of the terrestrial small mammals of Zakouma National Park,Chad

The terrestrial small mammal community of the Zakouma National Park (Chad) was assessed by live trapping in various habitats during the dry season. Nearly 3000 trap-nights yielded 505 captures of nine rodent and two shrew species, making up a representative small mammal community for the Sudanian savanna biotic zone. Murine rodents of the genusMastomys dominated, withM. erythroleucus andM. cf.kollmannspergeri occuring at similar abundances. The former was widespread and especially abundant in habitats with high tree cover. The latter was more localized, predominantly in annually flooded habitats characterized by a clay-rich soil, often withAcacia seyal as the main vegetation. Population structure differed between the two species, suggesting distinct reproductive strategies possibly linked with habitat preferences: theM. erythroleucus population comprised mainly young, immature individuals, whereasM. cf.kollmannspergeri was represented by older individuals, a significant fraction of which had already reproduced.Taterillus congicus andTatera kempi (gerbilline rodents), together withLemniscomys zebra, were mainly found in more open habitats with sand-rich soils.Arvicanthis niloticus, Acomys cf.johannis, Mus mattheyi andXerus erythropus were the other rodents captured, whereas shrews were represented byCrocidura fulvastra andSuncus sp.     

The small mammals from the Holocene site of Guenfouda (Jerada,Eastern Morocco): chronological and paleoecological implications

The study of small mammals may provide important chronological and paleoenvironmental information in the archaeological context of a particular geographic region. Few specific studies have been conducted on fossil small mammals in North Africa, especially for the late Quaternary period. However, the Holocene site of the Guenfouda Cave, situated in the region of Oujda (Eastern Morocco), provides new data on the chronology and the paleoecology of this period. The small-mammal association from Guenfouda comprises at least 12 taxa: two soricomorphs (Crocidura russula and C. whitakeri), one macroscelian (Elephantulus rozeti), two bats (Myotis blythii and Rhinolophus hipposideros) and seven rodents (Mus spretus, Meriones shawii, Apodemus sylvaticus, Dipodillus campestris, Eliomys sp., Atlantoxerus getulus and Ctenodactylus sp.). The absence in our assemblage of species recently introduced to Morocco, such as Mus musculus and Rattus spp. (R. rattus and R. norvegicus), allows us to establish relative data for the beginning of the Holocene (Neolithic) for the Guenfouda Cave in accordance with the archaeological remains recovered. From a paleoecological point of view, the small-mammal assemblage shows a mosaic landscape dominated by a Mediterranean climate similar to today but slightly drier, comparable to that found in other sites in North Africa with an analogous chronology.     

Effects of urban habitat fragmentation on common small mammals: species versus communities

There is an increasing interest in understanding how species respond to the modifications of habitat attributes in urban areas. Patterns in the occurrence and abundance of small mammal communities in 15 isolated patches of remnant natural and semi-natural habitat of Porto Metropolitan Area (Portugal) were assessed against environmental characteristics (from both the patch and the surrounding matrix) of each patch using multiple regressions and canonical correspondence analysis. Four species of common small mammals were found: wood mouse (Apodemus sylvaticus), greater white-toothed shrew (Crocidura russula), Algerian mouse (Mus spretus) and house mouse (Mus musculus). Our results showed that both relative abundance and species richness were negatively affected by urbanization. The species richness also displayed a negative association with the increase of forest around the patch but relative abundance showed the opposite trend. At the species level, the relative abundance of A. sylvaticus and C. russula showed a negative association with urbanization. Our results reveal that these two species also benefit from a mosaic of habitats and pervious areas in the surrounding matrix. The relative abundance of M. spretus and M. musculus showed a negative effect of forest area around the patch. Understanding how the increase of urbanization affects small mammals will be particularly useful for the managers of urban landscapes, as these animals occupy a pivotal position in the ecosystems.     

Elevational Distribution and Ecology of Small Mammals on Africa’s Highest Mountain

Mt Kilimanjaro is Africa’s highest mountain, and an icon for a country famous for its mammalian fauna. The distribution and abundance of small mammals on the mountain are poorly known. Here we document the distribution of shrews and rodents along an elevational gradient on the southeastern versant of Kilimanjaro. Five sites were sampled with elevational center points of 2000, 2500, 3000, 3500 and 4000 m, using a systematic methodology of standard traps and pitfall lines, to inventory the shrews and rodents of the slope. Sixteen species of mammal were recorded, including 6 shrew and 10 rodent species, and the greatest diversity of both was found at 3000 m, the elevational midpoint of the transect. No species previously unrecorded on Kilimanjaro were observed. Two genera of rodents that occur in nearby mountains (Hylomyscus and Beamys) were not recorded. Myosorex zinki, the only mammal endemic to Mt. Kilimanjaro, which previously was known by only a few specimens collected in the ericaceous or moorland habitat, was found in all but one (the lowest) of the sites sampled, and was one of the most widespread species of small mammal along the gradient. Two shrews (Crocidura allex and Sylvisorex granti) and one rodent (Dendromus insignis) were found throughout the entire transect, with Dendromus being observed at our highest trap point (4240 m). As in similar faunal surveys on other mountains of Tanzania, rainfall influenced the sample success of shrews, but not rodents. Trap success for rodents at 3500 m was notably low. This study contributes further justification for the conservation of the forest habitat of Mt. Kilimanjaro.     

Comparative study of Spanish and Italian terrestrial small mammal coenoses from different biotopes in Mediterranean peninsular tip regions

A comparison of terrestrial small mammal coenoses belonging to nine different biotopes in the tips of the Iberian and Italian peninsulas was carried out using the pitfall trapping method. The influence of both habitat type and peninsular effect on composition of small mammal coenoses was analysed. In Southern Italy, 203 specimens belonging to seven species were trapped: Suncus etruscus (Savi, 1822), Crocidura suaveolens (Pallas, 1811), C. leucodon (Hermann, 1780), Microtus savii (de Sélys-Longchamps, 1838), Apodemus sylvaticus (L., 1758), A. flavicollis (Melchior, 1834) and Mus musculus domesticus Schwarz & Schwarz, 1943. In Southern Spain 428 specimens belonging to five species were trapped: Suncus etruscus, Crocidura russula (Hermann, 1780), Microtus duodecimcostatus (de Sélys-Longchamps, 1839), Apodemus sylvaticus and Mus spretus Lataste, 1883. The relative density of small mammals occurring in the nine Spanish sampling stations was twice that recorded in the Italian stations; however the number of species recorded in the different biotopes show similar mean values, ranging from three to five in Andalusia and from three to six in Calabria. Apodemus sylvaticus was the dominant species in the Calabrian stations, whereas Crocidura russula prevailed in Andalusia. The biotic diversity values are very similar in the Calabrian and Andalusian biotopes. By contrast, the Insectivora/Rodentia ratio was always higher in Andalusia. The more xerophytic biotopes showed greater similarities between the communities in Southern Spain and Southern Italy, while the cooler biotopes differed between these two peninsulas.     

On the Parasitic Protozoa of Liberia. V. Coccidia of Liberian Rodents.

SYNOPSIS. In a survey of coccidia of rodents from Harbel, Libera, the following species of Eimeria were found and described: E. musculoidei n. sp. from Mus (Leggada) musculoides; E. separata Becker & Hall, 1931 from Rattus (Dephomys) defua (new host record); E. praomysis n. sp. from Rattus (Praomys) tullbergi rostratus; E. dasymysis n. sp. from Dasymys incomptus rufulus; E. lemniscomysis n. sp. from Lemniscomys striatus striatus; and E. lophuromysis n. sp., E. sikapusii n. sp., E. liberiensis n. sp., E. harbelensis n. sp., E. africana n. sp., and E. kruidenieri n. sp. from Lophuromys sikapusi sikapusi.     

Record of five new endemic small mammal hosts for four ectoparasite species from Sri Lanka

Both ticks and fleas are medically important arthropods, which act as vectors for a number of zoonotic diseases. In Sri Lanka, 35 species of ticks and 20 species of fleas have been reported from mammals, birds and reptiles. However, records of these parasites from small mammals are scanty. Here, we report ticks and fleas infesting muroid rodents and shrews including endemic species collected from around the country. Of the 149 small mammals collected, 48 individuals were infested with ticks, fleas or both. Immature stages of three tick species, Ixodes ceylonensis, Haemaphysalis hystricis and Hyalomma brevipunctata and unidentified species of Rhipicephalus were recorded from ten small mammal species. Four species of fleas, Stivalius phoberus, Stivalius aporus, Lentistivalius ferinus and Nosopsyllus tamilanus were identified from five species of small mammals. We report new host species for I. ceylonensis (Crocidura miya, Suncus montanus and Solisorex pearsoni), S. aporus (S. montanus and Mus fernandoni), N. tamilanus (S. pearsoni) and Rhipicephalus spp. (Crocidura hikmiya, S. montanus, S. pearsoni, M. fernandoni). All new host species reported here are endangered or critically endangered endemics to Sri Lanka.     

Molecular and morphometric variation in two sibling species of the genus Praomys (Rodentia: Muridae): implications for biogeography

The rodent genus Praomys is widely distributed in the African tropics. The species are cryptic, rendering the species taxonomy unclear. There are differences of opinion concerning the specific status of Praomys misonnei and Praomys tullbergi, and their geographical distribution. We sequenced the cytochrome b and/or the 16S gene of 221 specimens from 12 countries in order to evaluate the genetic variability within these two species, and to precisely determine their geographical distribution. Morphological and morphometrical analyses on the sequenced specimens were also performed to find criteria useful for the identification of museum specimens. Our results confirm that P. misonnei and P. tullbergi are two valid species that can be separated by molecular data. However, no single discrete morphological character or simple metric measurement can be used to discriminate them. The percentage of misclassified individuals in multivariate discriminant analysis is relatively high (10%). The two species have allopatric distributions: P. tullbergi occurs in West Africa, from eastern Guinea to western Ghana, and P. misonnei is widely distributed from eastern Ghana to western Kenya. Within P. misonnei we identified three or four major geographical clades: a West Central African clade, an East African clade, a Nigerian clade, and a possible West African clade. Within P. misonnei, high geographical morphometrical variability was also identified. The role of both rivers and Pleistocene forest refugia in promoting speciation within the genus Praomys is discussed. © 2010 The Linnean Society of London, Zoological Journal of the Linnean Society, 2010, 160 , 397–419.     

Tick-Borne Zoonotic Bacteria in Wild and Domestic Small Mammals in Northern Spain

The prevalence and diversity of tick-borne zoonotic bacteria (Borrelia spp., Anaplasma phagocytophilum, Coxiella burnetii, and spotted fever group rickettsiae) infecting 253 small mammals captured in the Basque Country (Spain) were assessed using PCR and reverse line blot hybridization. Trapping sites were selected around sheep farms (study 1, 2000 to 2002) and recreational parks (study 2, 2003 to 2005). The majority of the studied mammals (162) were wood mice (Apodemus sylvaticus), but six other different species were also analyzed: yellow-necked mice (Apodemus flavicollis), shrews (Crocidura russula and Sorex coronatus), bank voles (Clethrionomys glareolus), domestic mice (Mus domesticus), and moles (Talpa europaea). The results showed an infection rate ranging from 10.7% to 68.8%, depending on the small mammal species. One C. russula shrew and one A. sylvaticus mouse gave positive reactions for A. phagocytophilum, and C. burnetii was detected in two domestic mice and one A. sylvaticus mouse in a farm. The DNA of Borrelia spp. was detected in 67 animals (26.5%), most of them presenting positive hybridization with the probe for Borrelia sp. strain R57, the new Borrelia species previously detected in small mammals in our region. Furthermore, a second PCR and reverse line blot hybridization specific for B. burgdorferi sensu lato revealed the presence of Borrelia afzelii in 6.3% of C. glareolus voles and 14.3% of S. coronatus shrews. All small mammals were negative for spotted fever group rickettsiae. These results highlight the relevance of small mammals as reservoirs of some zoonotic bacteria.