Spawning,maturity, growth and movement of Platycephalus fuscus (Cuvier, 1829) (Platycephalidae): fishery management considerations

The dusky flathead (Platycephalus fuscus) is an important teleost harvested by recreational and commercial fishers throughout its endemic distribution along eastern Australia. This study indicates that the species has an extended spawning period throughout the austral summer, with females in spawning condition occurring in lower estuarine and coastal waters. Total length (L₅₀) and age (A₅₀) at which 50% (±1 SE) of the population was mature was 31.72 (±1.08) cm TL and 1.22 (±0.44) years for males and 56.75 (±0.60) cm TL and 4.55 (±0.13) years for females. The von Bertalanffy growth parameters differed significantly between sexes; females grew faster and attained a greater maximum TL and age than males. The largest female was 98.5 cm TL (7.5 kg), and the oldest 16 years, whereas the largest male was 61.5 cm TL (1.58 kg) and 11 years of age. A tag‐and‐release study identified the exchange of sub‐adult and mature‐sized individuals among estuaries. Determinations of length‐based management regulations for the species are compounded by the large gender‐based differences in growth and length‐at‐maturity. Current minimum legal lengths of 30–40 cm TL protect approximately 3–9% of the female spawning population. Alternative management options, including harvest slot sizes, need to be investigated and tested.     

Age and growth of the Giant Kelpfish,Heterostichus rostratus Girard 1854, in Southern California,USA

In order to update existing life history parameters, age and growth patterns were determined for Giant Kelpfish, Heterostichus rostratus sampled from nearshore kelp forest and estuary habitats in southern California (USA) from April 2012 through June 2015. Fish were collected by pole spear, beach seine, beam trawl, purse seine, and square enclosure. Using age‐at‐length data derived from otolith readings, Giant Kelpfish were found to have a relatively short life span with the largest examined fish reaching a maximum total length of 413 mm at an age of 5 years. Von Bertalanffy growth parameters estimated for this species were: L_∞ = 45.1 cm, k = 0.25, t₀ = ?0.66. Standard length (SL, cm)‐total length (TL, cm) and total length (TL, cm)‐weight (W, g) relationships were described by the equations: SL = 0.90 TL – 1 and W = 2.21 × 10^?3 TL^3.39, respectively. Wild juvenile Giant Kelpfish collected for this study had a higher growth rate than laboratory‐reared fish from a previous study.     

Age validation and variation in growth,mortality and population structure of Liza argentea and Myxus elongatus (Mugilidae) in two temperate Australian estuaries

This study investigated variation in the rates of growth and mortality, and age and fork‐length (L_F) compositions of two exploited species of Mugilidae, Liza argentea and Myxus elongatus, in two south‐east Australian estuaries (Lake Macquarie and St Georges Basin). An ageing protocol was developed by counting opaque growth zones on sectioned otoliths which was validated by periodically examining the otoliths of captive‐reared young‐of‐the‐year fishes, and marginal increment analysis of wild fishes. The maximum recorded age was 17 years for L. argentea and 12 years for M. elongatus, which is greater than generally observed in other species of mugilids. Growth models of each species significantly differed between sexes and, except for male L. argentea, between estuaries. Fishes from Lake Macquarie generally had a greater mean L_F at age than those from St Georges Basin and females of both species generally attained a greater maximum L_F and age than males. Gillnet catches of L. argentea were of similar L_F and age compositions in both estuaries, whereas the age composition of catches of M. elongatus in Lake Macquarie contained a greater proportion of younger fish. Estimates of total, natural and fishing mortality were greater for M. elongatus than L. argentea across both estuaries, and estimates of total mortality were greatest for both species in Lake Macquarie. The data indicate that neither species has been overfished in these estuaries.     

Three new species of <Emphasis Type="Italic">Sarcocornia</Emphasis> (Chenopodiaceae) from South Africa

Sarcocornia decussata, S. freitagii and S. tegetaria from South Africa are described as new taxa. Sarcocornia decussata and S. freitagii are narrow endemics of the West Coast of South Africa where they are found in inland saline habitats (quartz patches, salt pans and saline alluvia) while S. tegetaria is an endemic of southern African coasts (spanning Namibia, South Africa and Mozambique) where it is confined to low-lying intertidal habitats of estuaries.     

DNA bar-coding reveals source and patterns of <Emphasis Type="Italic">Thaumastocoris peregrinus</Emphasis> invasions in South Africa and South America

Thaumastocoris peregrinus is a recently introduced invertebrate pest of non-native Eucalyptus plantations in the Southern Hemisphere. It was first reported from South Africa in 2003 and in Argentina in 2005. Since then, populations have grown explosively and it has attained an almost ubiquitous distribution over several regions in South Africa on 26 Eucalyptus species. Here we address three key questions regarding this invasion, namely whether only one species has been introduced, whether there were single or multiple introductions into South Africa and South America and what the source of the introduction might have been. To answer these questions, bar-coding using mitochondrial DNA (COI) sequence diversity was used to characterise the populations of this insect from Australia, Argentina, Brazil, South Africa and Uruguay. Analyses revealed three cryptic species in Australia, of which only T. peregrinus is represented in South Africa and South America. Thaumastocoris peregrinus populations contained eight haplotypes, with a pairwise nucleotide distance of 0.2–0.9% from seventeen locations in Australia. Three of these haplotypes are shared with populations in South America and South Africa, but the latter regions do not share haplotypes. These data, together with the current distribution of the haplotypes and the known direction of original spread in these regions, suggest that at least three distinct introductions of the insect occurred in South Africa and South America before 2005. The two most common haplotypes in Sydney, one of which was also found in Brisbane, are shared with the non-native regions. Sydney populations of T. peregrinus, which have regularly reached outbreak levels in recent years, might thus have served as source of these three distinct introductions into other regions of the Southern Hemisphere.     

Phylogenomics and historical biogeography of the monocot order Liliales: out of Australia and through Antarctica

We present the first phylogenomic analysis of relationships among all ten families of Liliales, based on 75 plastid genes from 35 species in 29 genera, and 97 additional plastomes stratified across angiosperm lineages. We used a supermatrix approach to extend our analysis to 58 of 64 genera of Liliales, and calibrated the resulting phylogeny against 17 fossil dates to produce a new timeline for monocot evolution. Liliales diverged from other monocots 124 Mya and began splitting into separate families 113 Mya. Our data support an Australian origin for Liliales, with close relationships between three pairs of lineages (Corsiaceae/Campynemataceae, Philesiaceae/Ripogonaceae, tribes Alstroemerieae/Luzuriageae) in South America and Australia or New Zealand reflecting teleconnections of these areas via Antarctica. Long‐distance dispersal (LDD) across the Pacific and Tasman Sea led to re‐invasion of New Zealand by two lineages (Luzuriaga, Ripogonum); LDD allowed Campynemanthe to colonize New Caledonia after its submergence until 37 Mya. LDD permitted Colchicaceae to invade East Asia and Africa from Australia, and re‐invade Africa from Australia. Periodic desert greening permitted Gloriosa and Iphigenia to colonize Southeast Asia overland from Africa, and Androcymbium–Colchicum to invade the Mediterranean from South Africa. Melanthiaceae and Liliaceae crossed the Bering land‐bridge several times from the Miocene to the Pleistocene.     

Understanding niche shifts: using current and historical data to model the invasive redlegged earth mite,Halotydeus destructor

Aim Niche conservatism is key to understanding species responses to environmental stress such as climate change or arriving in new geographical space such as biological invasion. Halotydeus destructor is an important agricultural pest in Australia and has been the focus of extensive surveys that suggest this species has undergone a niche shift to expand its invasive range inland to hotter and drier environments. We employ modern correlative modelling methods to examine niche conservatism in H. destructor and highlight ecological differences between historical and current distributions. Location Australia and South Africa. Methods We compile comprehensive distribution data sets for H. destructor, representing the native range in South Africa, its invasive range in Australia in the 1960s (40 yr post‐introduction) and its current range in Australia. Using MAXENT, we build correlative models and reciprocally project them between South Africa and Australia and investigate range expansion with models constructed for historical and current data sets. We use several recently developed model exploration tools to examine the climate similarity between native and invasive ranges and subsequently examine climatic variables that limit distributions. Results The invasive niche of H. destructor in Australia transgresses the native niche in South Africa, and the species has expanded in Australia beyond what is predicted from the native distribution. Our models support the notion that H. destructor has undergone a more recent range shift into hotter and drier inland areas of Australia since establishing a stable distribution in the 1960s. Main conclusions Our use of historical and current data highlights that invasion is an ongoing dynamic process and demonstrates that once a species has reached an established range, it may still expand at a later stage. We also show that model exploration tools help understand factors influencing the range of invasive species. The models generate hypotheses about adaptive shifts in H. destructor.     

Mangrove expansion and salt marsh decline at mangrove poleward limits

Mangroves are species of halophytic intertidal trees and shrubs derived from tropical genera and are likely delimited in latitudinal range by varying sensitivity to cold. There is now sufficient evidence that mangrove species have proliferated at or near their poleward limits on at least five continents over the past half century, at the expense of salt marsh. Avicennia is the most cold‐tolerant genus worldwide, and is the subject of most of the observed changes. Avicennia germinans has extended in range along the USA Atlantic coast and expanded into salt marsh as a consequence of lower frost frequency and intensity in the southern USA. The genus has also expanded into salt marsh at its southern limit in Peru, and on the Pacific coast of Mexico. Mangroves of several species have expanded in extent and replaced salt marsh where protected within mangrove reserves in Guangdong Province, China. In south‐eastern Australia, the expansion of Avicennia marina into salt marshes is now well documented, and Rhizophora stylosa has extended its range southward, while showing strong population growth within estuaries along its southern limits in northern New South Wales. Avicennia marina has extended its range southwards in South Africa. The changes are consistent with the poleward extension of temperature thresholds coincident with sea‐level rise, although the specific mechanism of range extension might be complicated by limitations on dispersal or other factors. The shift from salt marsh to mangrove dominance on subtropical and temperate shorelines has important implications for ecological structure, function, and global change adaptation.     

Biogeography of Nicotiana section Suaveolentes (Solanaceae) reveals geographical tracks in arid Australia

Aim Nicotiana section Suaveolentes is largely endemic to Australia but includes one species endemic to Africa, one to New Caledonia and Tongatupa, and one to the Marquesas Islands in the Pacific. Other sections of Nicotiana are found in the New World. In Australia, Suaveolentes is widespread across the continent, with many taxa adapted to the Eremean zone. We aim to analyse the biogeography of the Australian clade, both to shed light on the evolution of the group and to determine general area relationships that provide insight into the history of the arid‐zone biota. Location Mesic and arid regions of continental Australia, the Central–South Pacific and Namibia, Africa. Methods A phylogeny of Suaveolentes, based on morphology and molecular data, was used to analyse the relationships of areas in which the taxa occur. The section is monophyletic, and all but three taxa were included (25). The method of paralogy‐free subtree analysis was employed, with the basal taxon Nicotiana africana used as the outgroup. Results Paralogy‐free subtree analysis found five area subtrees that, when combined, resulted in a minimal area cladogram with six resolved nodes. Pacific and mesic eastern Australia (including Lord Howe Island) are at the base of the area cladogram, followed by the differentiation of North West Australia and later South East Australia. Arid regions of Australia are related, revealing three biogeographical tracks: a northern track including the Great Sandy Desert and Tanami, which are related to the Pilbara; a central track relating the Western Desert, Central Ranges, Eastern Desert and North East Interzone; and a southern track relating the South West Interzone, Nullarbor, Adelaide/Eyre and the South East Interzone. Plesiomorphic taxa with chromosome number n = 24–23 occur on the periphery of the continent, and derived taxa with n = 21, 20, 18, 16–15 identify the tracks across arid Australia. Main conclusions The patterns of distribution and differentiation of Suaveolentes in Australia show that the age of the clade is at least Early Miocene, dating to before the onset of aridification in Australia about 15 Ma. The patterns are also interpreted as evidence that it was vicariance that largely shaped speciation in the Eremean zone, with range expansion of some widespread taxa probably occurring in the most recent cycles of severe drying and mobilization of desert dune sands.     

Molecular evidence that fireweed (Senecio madagascariensis, Asteraceae) is of South African origin

ITS1 sequence data was obtained for fireweed (Senecio madagascariensis) andS. lautus from Australia,S. madagascariensis andS. inaequidens from South Africa andS. madagascariensis from Madagascar. Despite the low level of variation (0.0–3.4%), these data further resolve the controversy concerning the identity and origin of fireweed. They confirm that fireweed is part of the South AfricanS. madagascariensis/S. inaequidens complex, and indicate that the infestation in Australia originated from South Africa as opposed to Madagascar. This will facilitate a resumption of biological control efforts in Australia and will direct surveys for control agents to South Africa.     

Age, Growth Rates, Sex Change and Feeding Habits of Notothenioid Fish Eleginops Maclovinus from the Central-southern Chilean Coast

The róbalo, Eleginops maclovinus, a protandrous hermaphrodite species, is an important component of the ichthyofauna in the coastal areas and estuaries of southern Chile. However, there are many aspects about its life history that are unknown. Three hundred and eighty-three specimens of E. maclovinus (19–79 cm total length, TL) were collected between November 2002 and December 2003 from central-southern Chile. Marginal increment analysis from sagittal otoliths showed a single annual minimum in March, demonstrating that a single growth ring is formed each year. The growth of E. maclovinus was described by the von Bertalanffy growth model by following parameters: L _∞ = 105.4 cm TL, K = 0.08 per year, and t ₀ = −1.03 years. E. maclovinus can live for 10 years. The length and age at which the 50% of the males in the population transformed into females was estimated at ~36 cm TL and ~5-years old. A total of 27 prey items were identified. The most important prey items were the crustaceans Hemigrapsus crenulatus and Emerita analoga associated with estuarial and marine habitats respectively. Ontogenetic changes in the diet were related to the spatial distributional pattern of males (1–4 years old, in the estuary) and females (5–8 years old, in the sea). Also, diet changes are associated with the type of available prey in each habitat occupied, indicating a generalized opportunist strategy.     

Redescription of the hagfishes (Myxinidae: Eptatretus) from southern Africa

The hagfishes of the genus Eptatretus (Myxinidae) from southern Africa are known from three poorly studied species: Eptatretus hexatrema, a common species from Namibia and South Africa; Eptatretus profundus, known only from the holotype collected off Cape Point (South Africa); and Eptatretus octatrema, known from two syntypes from the Agulhas Bank (South Africa). Taxonomic, morphological and distributional information about these three species are reviewed and updated based on the examination of additional specimens collected in South African waters. Eptatretus hexatrema differs from all congeners by having six pairs (rarely seven) of gill apertures arranged in a straight line, 3/2 multicusp pattern of teeth, total cusps 44–49, trunk pores 53–60, total pores 93–107, preventral length 45.1–57.4% TL, tail length 11.6–14.3% TL, tail depth 5.7–8.1% TL, and two bilaterally symmetrical nasal-sinus papillae. Eptatretus octatrema differs from all congeners by having usually eight (some specimens with seven) pairs of gill apertures arranged in a straight line, 3/2 multicusp pattern of teeth, 42–46 total cusps, 22–26 prebranchial pores, 63–68 trunk pores, 104–117 total pores, and two bilaterally symmetrical nasal-sinus papillae. Eptatretus profundus differs from all congeners by having five pairs of gill apertures arranged in a straight line, 3/2 multicusp pattern of teeth, total cusps 42–46, prebranchial pores 12–15, branchial pores 4–5, trunk pores 48–52, tail pores 15–17, total pores 81–86, and body depth at PCD 7.0–9.7% TL. An identification key for the hagfishes from southern Africa is provided and the conservation status of E. octatrema, a species considered to be Critically Endangered, is discussed in light of the new findings.     

Two new species of Acutogordius (Nematomorpha), with a brief review of literature data of this genus

We describe two new species of the nematomorph genus Acutogordius, A. sulawensis from Sulawesi and A. protectus from Madagascar. For comparative reasons, the other known species are briefly described and discussed. The genus Acutogordius now comprises nine species regarded as valid. They are distributed on the entire southern hemisphere, from South and Central America over Africa and South‐east Asia to Australia. The three male specimens of Acutogordius protectus differ in the shape of a cuticular structure, the postcloacal crescent, which has implications for the potential of this character as a taxonomic tool.     

Eelgrass,Zostera marina,as essential fish habitat for young‐of‐the‐year winter flounder,Pseudopleuronectes americanus (Walbaum, 1792) in Maine estuaries

Distribution and density by habitat for age‐0, young‐of‐the‐year (YOY) winter flounder, Pseudopleuronectes americanus (Walbaum, 1792), were compared for two Maine estuaries to help define essential fish habitat for this life history stage. Two estuaries (Weskeag River and Penobscot Bay) along Mid‐coast Maine were sampled monthly with daytime 1.0 m² fixed‐frame throw traps around neap low tide, May–December over two consecutive years (2003–2004). Both eelgrass and adjacent sand/mud (20–60 cm deep) were randomly sampled with equal effort (4–12 samples per month) at two sites in both the Weskeag River and Penobscot Bay. Significantly higher densities of YOY winter flounder (2–9 cm TL) occurred in eelgrass relative to sand/mud. Density increased significantly in both habitats in 2004, and was higher in Penobscot Bay relative to the Weskeag River. YOY densities compared by eelgrass coverage within throw traps were found to be significantly higher in eelgrass that exceeded 30% coverage when compared with adjacent sand/mud areas and eelgrass coverage of 10–20%. YOY occurred in all months sampled (May–December); no density differences existed by month. These results indicate that very shallow (<0.6 m) eelgrass habitat is of key importance to YOY winter flounder in Maine estuaries and should be viewed as essential fish habitat (EFH) for this species and life stage.     

Protein requirement of the prawn Marsupenaeus japonicus estimated by a factorial method

The protein requirement to give maximum body protein retention in the prawn Marsupenaeus japonicus was assessed by determining both daily protein needed for maintenance (M) and daily body protein increment (G) when the juvenile prawn was maintained on a diet containing high quality protein. The body protein increment was obtained by determining carcass nitrogen increment when the prawn was fed on casein-based diets. The protein required for maintenance was estimated by regressing weight gains of the prawn on the diets containing graded levels of casein. True daily increase or retention of body protein in the prawn corresponded to the sum of G and M, and it was 3.2 g protein per kg body weight per day. The dietary protein requirement of juvenile M. japonicus for maximum body protein retention was suggested to be about 10 g per kg body weight per day providing that the prawn was fed the casein-based diet containing 50% crude protein (net protein utilization = 32) at the feeding level of 2%.     

The current and future potential geographic range of West Indian fruit fly,Anastrepha obliqua （Diptera： Tephritidae）

The West Indian fruit fly, Anastrepha obliqua （Macquart）, is one of the most important pests throughout the Americas. CLIMEX 3.0 and ArcGIS 9.3 were used to model the current and future potential geographical distribution of this pest. Under current climatic conditions, A. obliqua is predicted to be able to establish throughout much of the tropics and subtropics, including not only North and South America, where it has been reported, but also southern Asia, northeastern Australia and Sub-Saharan Africa. The main factors limiting the pest＇s range expansion may be cold stress. Climate change expands the potential distribution of A. obliqua poleward as cold stress boundaries recede, but the predicted distribution in northwestern Australia and northern parts of Sub-Saharan Africa will decrease because of heat stress. Considering the widely suitable range for A. obliqua globally and in China, enhanced quarantine and monitoring measures should be implemented in areas that are projected to be suitable for the establishment of the pest under current and future climatic conditions.     

Growth and mortality of the brushtooth lizardfish (Saurida undosquamis) in Iskenderun Bay (eastern Mediterranean Sea) using length frequency analysis

The growth and mortality of brushtooth lizardfish Saurida undosquamis (Richardson, 1848) in Iskenderun Bay (eastern Mediterranean Sea) were investigated based on length frequency data using the fisat software. Total length of the sampled 4711 fish ranged from 6.0 to 39.0 cm. The von Bertalanffy growth function estimates were L_∞ = 42.00 cm, k = 0.51 year^‐1, t₀ = −0.29 years. Total mortality rate (Z) was computed as 1.76 year^‐1 and the exploitation ratio was 0.51, indicating that the brushtooth lizardfish stock is on the verge being overfished.     

Coupling between Marine Plankton and Freshwater Flow in the Plumes off a Small Estuary

Freshwater discharge from rivers is a powerful forcing agent in coastal ecosystems. It not only generates strong ecological effects in estuaries, but also drives the dynamics of nearshore marine waters where prominent river plumes form biogeochemical hot spots in coastal seas worldwide. Large plumes from major rivers exert important controls on pelagic processes. The majority of estuaries are smaller, however, and the importance of the smaller plumes they generate is unknown. We measured the degree of coupling between freshwater flow and inshore zooplankton in such a plume from a subtropical estuary on the east coast of Australia. Flow regimes encompassed long periods of low freshwater input, punctuated by pulsed freshets that initiated the formation of buoyant, lower‐salinity plumes in the nearshore marine zone. Plumes stimulated phytoplankton biomass in the receiving waters, and ultimately changes in zooplankton assemblages. Zooplankton responded strongly to river discharge: (1) in the absence of substantial freshwater flows and plumes, zooplankton was broadly similar in density and biomass across the estuarine‐marine gradient; (2) freshets that generated significant plumes strongly modified hydrological conditions and lowered zooplankton in the estuarine and nearshore waters, and (3) after the initial freshet, zooplankton in the residual plume was at a higher density in nearshore than shelf waters. We demonstrate that coupling between riverine and coastal pelagic systems operates in small plumes, but that there is substantial temporal variance linked to fluctuations in freshwater delivery. (© 2008 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Invasion history of Lycium ferocissimum in Australia: The impact of admixture on genetic diversity and differentiation

Aim

We investigated the invasion history of Lycium ferocissimum, a spine-covered shrub native to South Africa that was introduced to Australia in the mid-1800s, and has since developed into a damaging invasive plant of undisturbed landscapes and pastures. In addition to identifying the provenance of the Australian plants, we tested for evidence of admixture, and contrasted genetic diversity and structuring across the native and introduced ranges.

Location

Samples were collected across South Africa (24 localities) and Australia (26 localities).

Methods

We used genotyping-by-sequencing (3117 SNPs across 381 individuals) to assess population genetic structuring in L. ferocissimum across Australia and South Africa. Coalescent analyses were used to explicitly test contrasting invasion scenarios.

Results

Clear geographic genetic structuring was detected across South Africa, with distinct clusters in the Eastern and Western Cape provinces. The L. ferocissimum plants in Australia form their own genetic cluster, with a similar level of genetic diversity as plants in South Africa. Coalescent analyses demonstrated that the lineage in Australia was formed by admixture between Eastern Cape and Western Cape plants, with most of the genetic material from the Australian lineage originating from the Western Cape. Our analyses suggest that L. ferocissimum plants were originally introduced to South Australia, though it is unclear whether admixture occurred before or after its introduction to Australia. We detected little evidence of geographic genetic structure across Australia, although many of the populations were genetically distinct from one another.

Main Conclusions

Our results illustrate how admixture can result in genetically diverse and distinct invasive populations. The complex invasion history of L. ferocissimum in Australia poses particular challenges for biological control. We suggest potential biological control agents should be screened against admixed plants (in addition to plants from the Eastern and Western Cape) to test whether they provide effective control of the genetically distinct invasive lineage.     

Fish communities in temporarily open/closed estuaries from the warm- and cool-temperate regions of South Africa: A review

The majority of estuaries along the coastline of southern Africa are termed temporarily open/closed estuaries (TOCEs) and are closed off from the sea for varying periods by a sandbar which forms at the mouth. It is therefore important to understand the processes occurring within TOCEs and their importance to fishes in order to make sound management recommendations. Estuaries along the coast of South Africa and their associated fish assemblages are biogeographically distinct and occur in either a subtropical, warm-temperate or cool-temperate zone. There are 125 TOCEs found within the cool-temperate and warm-temperate zones. Most fish species found in TOCEs are the juveniles of marine taxa that breed at sea. Permanently open estuaries generally have a higher diversity of species than TOCEs, but TOCEs still provide important nursery areas for many marine species and numerically often have a higher proportion of estuarine resident species. Important taxa in terms of abundance and biomass in warm-temperate TOCEs include the sparids Rhabdosargus holubi and Lithognathus lithognathus, several mugilid species, estuarine residents (particularly Gilchristella aestuaria and Atherina breviceps) and the freshwater cichlid Oreochromis mossambicus. The diversity of fishes in cool-temperate TOCEs is low when compared with warm-temperate systems and Liza richardsonii tends to dominate catches by number and mass in most systems. Several species recorded in TOCEs show clear longitudinal distribution trends. For example Atherina breviceps is generally more abundant in the lower reaches of estuaries. Mouth state, particularly the frequency, timing and duration of mouth opening plays a key role in determining species richness, composition, diversity and abundance in TOCEs. Mouth state is directly linked to freshwater input. Reduced river inflow leads to prolonged mouth closure and shorter open phases, which inhibits immigration and emigration of marine fish species between estuaries and the sea. Understanding of the effects of various processes occurring within these systems, particularly variation in freshwater input, on the biota of these important systems facilitates the development of informed management recommendations.