Abundance and production of bacteria, and relationship to phytoplankton production, in a large tropical lake (Lake Tanganyika)

1. Abundance and bacterial production (BP) of heterotrophic bacteria (HBact) were measured in the north and south basins of Lake Tanganyika, East Africa, during seasonal sampling series between 2002 and 2007. The major objective of the study was to assess whether BP can supplement phytoplankton particulate primary production (particulate PP) in the pelagic waters, and whether BP and particulate PP are related in this large lake. HBact were enumerated in the 0–100 m surface layer by epifluorescence microscopy and flow cytometry; BP was quantified using ³H‐thymidine incorporation, usually in three mixolimnion layers (0–40, 40–60 and 60–100 m). 2. Flow cytometry allowed three subpopulations to be distinguished: low nucleic acid content bacteria (LNA), high nucleic acid content bacteria (HNA) and Synechococcus‐like picocyanobacteria (PCya). The proportion of HNA was on average 67% of total bacterial abundance, and tended to increase with depth. HBact abundance was between 1.2 × 10⁵ and 4.8 × 10⁶ cells mL⁻¹, and was maximal in the 0–40 m layer (i.e. roughly, the euphotic layer). Using a single conversion factor of 15 fg C cell⁻¹, estimated from biovolume measurements, average HBact biomass (integrated over a 100‐m water column depth) was 1.89 ± 1.05 g C m⁻². 3. Significant differences in BP appeared between seasons, especially in the south basin. The range of BP integrated over the 0–100 m layer was 93–735 mg C m⁻² day⁻¹, and overlapped with the range of particulate PP (150–1687 mg C m⁻² day⁻¹) measured in the same period of time at the same sites. 4. Depth‐integrated BP was significantly correlated to particulate PP and chlorophyll‐a, and BP in the euphotic layer was on average 25% of PP. 5. These results suggest that HBact contribute substantially to the particulate organic carbon available to consumers in Lake Tanganyika, and that BP may be sustained by phytoplankton‐derived organic carbon in the pelagic waters.     

Spatial variations of size-fractionated Chlorophyll, Cyanobacteria and Heterotrophic bacteria in the Central and Western Pacific

Geographic and vertical variations of size-fractionated (0.2–1μm, 1–10 μm, and >10 μm) Chlorophyll a (Chl.a) concentration, cyanobacteria abundance and heterotrophic bacteria abundance were investigated at 13 stations from 4^°S, 160^°W to 30^°N, 140^°E in November 1993. The results indicated a geographic distribution pattern of these parameters with instances of high values occurring in the equatorial region and offshore areas, and with instance of low values occurring in the oligotrophic regions where nutrients were almost undetectable. Cyanobacteria showed the highest geographic variation(ranging from 27×10³ to 16,582×10³cell l^-1), followed by Chl.a (ranging from 0.048 to 0.178μg l^-1), and heterotrophic bacteria (ranging from2.84×10³ to 6.50 ×10⁵ cell l^-1). Positive correlations were observed between nutrients and Chl.a abundance. Correspondences of cyanobacteria and heterotrophic bacteria abundances to nutrients were less significant than that of Chl.a. The total Chl.a was accounted for 1.0–30.9%, 35.9–53.7%, and 28.1–57.3% by the >10μm, 1–10 μm and 0.2–1 μm fractions respectively. Correlation between size-fractionated Chl.a and nutrients suggest that the larger the cell size, the more nutrient-dependent growth and production of the organism. The ratio of pheophytin to chlorophyll implys that more than half of the >10 μm and about one third of the 1–10 μm pigment-containing particles in the oligotrophic region were non-living fragments, while most of the 1–10 μm fraction was living cells. In the depth profiles, cyanobacteria were distributed mainly in the surface layer, whereas heterotrophic bacteria were abundant from surface to below the euphotic zone. Chl.a peaked at the surface layer (0–20 m) in the equatorial area and at the nitracline (75–100 m) in the oligotrophic regions. Cyanobacteria were not the principle component of the picoplankton. The carbon biomass ratio of heterotroph to phytoplankton was greater than 1 in the eutrophic area and lower than 1 in oligotrophic waters. This revised version was published online in August 2006 with corrections to the Cover Date.     

Trophic status of Tilitso,a high altitude Himalayan lake

The trophic status and water quality of Lake Tilitso (4920 m above sea level) in a high altitude region in central Nepal were surveyed in September, 1984. The lake is rather large with a maximum depth of 95 m and a surface area of 10.2 km². The lake water was turbid due to glacier silt and the euphotic layer was only 5 m deep. The nutrient concentration was very low with total phosphorus concentration 1–6 μg l⁻¹, and DTN concentration 0.10–0.22 mg l⁻¹. The phytoplankton biomass and chlorophyll-a concentration were also low. Primary production was estimated to be about 12 mg C m⁻² d⁻¹. The concentrations of particulate matter and most cations and bacterial number were higher in the epilimnion than in the hypolimnion. The trophic status of this lake was estimated as ultraoligotrophic.     

Cerium negative anomaly just before the Permian and Triassic boundary event — The upward expansion of anoxia in the water column

A negative excursion of Ce and a succeeding steep decline in δ¹³C found just before the Permian and Triassic boundary (PTB) of Julfa area offer a geochemical constraint on the cause of the mass extinction event of PTB. The geochemical studies of recent anoxic basins like the Black Sea strongly suggest that the Ce negative excursion of these carbonate platform sequence indicates the buildup of anoxic water in the offshore realm. The suboxic water mass associated with the Ce negative anomaly zone migrated and invaded into shallow carbonate shelf around 600 thousand years before the PTB. This was followed by an anoxic water mass without Ce anomaly, and resulted in a steep decline in δ¹³C and then mass extinction of marine shelf biota.     

Primary production and respiration of the phytoplankton of the Rivers Thames and Kennet at Reading

During the period April 1967-ApriI 1968 the phytoplankton production and respiration of the River Thames and its tributary, the River Kennet, were measured at approxi-mately 2-week intervals using the light and dark bottle technique. Concentrations of chlorophyll and pheopigment were determined weekly. On fourteen occasions sets of light and dark bottles were rotated in a specially designed apparatus, and production and respiration values obtained were found to be 1·38 ± 0·31 times higher than in stationary bottles at identical depths over the same period. There was little horizontal, vertical or diurnal variation in chlorophyll concentration showing that the water was well mixed. Peaks of chlorophyll were found in spring, summer and autumn in the Thames (max. 219 mg/m³) but there was very little variation in the Kennet (max. 38·2 mg/m³). In both rivers lowest concentrations were found during winter. Pheo-pigment concentration was low in both rivers for most of the period although in the Kennet this represented on average 50% of the pigments present. In the Thames a peak of pheopigments(1·33–5 mg/m³) was associated with the autumnal bloom and repre-sented 61 % of the total pigments. No pheopigments were detected during the spring bloom. The average concentration of suspended organic matter was identical in both rivers but in the Thames over 25 % was due to phytoplankton and in the Kennet almost 95 % was non-algal. In the Thames, net oxygen production reached a peak in May (10·81 gO₂/m²/day) and was negative from November to February (min. ?0·45 gO₂/m²/day). In the Kennet, maximum production also occurred in May (0·85 gO₂/m2) but was negative from the middle of May until the following March. The average annual net production was 1250 and ?78 g O₂/m² in the Thames and Kennet respectively. Respiration rates showed similar fluctuations being 4·59 g O₂/m²/day in spring in the Thames to 0·09 g O₂/m²/day in November. The Kennet was almost always lower (1·05–0·34 g O₂/m2/day. The average annual respiration was almost three times higher in the Thames than in the Kennet (641–228 g O₂/m²). Various factors which might influence production are discussed. The average net efficiency ofthe Thames phytoplankton fell within ranges described from other rivers. Net efficiencies ofthe Kennet were almost always negative. In the Thames it appeared that net production could be explained as a function of solar radiation, chlorophyll concentration and euphotic depth.     

Limnological characteristics of subtropical Lakes Phewa, Begnas, and Rupa in Pokhara Valley, Nepal

Limnological characteristics were studied and analyzed in the subtropical Lakes Phewa, Begnas, and Rupa of Pokhara Valley, Nepal, from 1993 to 1997. The annual water temperature ranged from 12° to 29°C in all lakes. Lake Phewa and Lake Begnas were monomictic and anoxic in the hypolimnion during thermal stratification from April to September. Dissolved oxygen was drastically depleted in April and/or May in shallow Lake Rupa when the macrophyte community began to decompose. NH₄ ⁺-N accumulated below 5 m during March–September when dissolved oxygen was depleted in Lakes Phewa and Begnas. The PC : PP ratio was higher, but the PC : PN and PN : PP ratios were close to the Redfield ratio (106C : 16N : 1P) in Lakes Phewa and Begnas, denoting that P was limited. Annual net primary production showed that the lakes were productive but will tend to become heterotrophic in the future. The seasonal variation of chlorophyll a concentration was high, but its annual variation was low. Ceratium hirundinella and Peridinium spp. in Lake Phewa, Microcystis aeruginosa and Aulacoseira granulata in Lake Begnas, and Tabellaria fenestra in Lake Rupa were the dominant species. The zooplankton population and species varied irregularly. On the basis of chlorophyll a concentration in the euphotic zone and phytoplankton species composition, the lakes seem to be oligoeutrophic and to have some characteristics of temperate lakes rather than tropical lakes. Received: April 26, 1999 / Accepted: September 20, 1999     

CO2 Saturation and Trophic Shift Induced by Microbial Metabolic Processes in a River-Dominated Ocean Margin (Tropical Shallow Lagoon,Chilika, India)

An effort has been made for the first time in Asia's largest brackish water lagoon, Chilika, to investigate the spatio-temporal variability in primary productivity (PP), bacterial productivity (BP), bacterial abundance (BA), bacterial respiration (BR) and bacterial growth efficiency (BGE) in relation to partial pressure of CO₂ (pCO₂) and CO₂ air–water flux and the resultant trophic switchover. Annually, PP ranged between 24 and 376 µg C L^?1 d^?1 with significantly low values throughout the monsoon (MN), caused by light limitation due to inputs of riverine suspended matter. On the contrary, BP and BR ranged from 11.5 to 186.3 µg C L^?1 d^?1 and from 14.1 to 389.4 µg C L^?1 d^?1, respectively, with exceptionally higher values during MN. A wide spatial and temporal variation in the lagoon trophic status was apparent from BP/PP (0.05–6.4) and PP/BR (0.10–18.2) ratios. The seasonal shift in net pelagic production from autotrophy to heterotrophy due to terrestrial organic matter inputs via rivers, enhanced the bacterial metabolism during the MN, as evident from the high pCO₂ (10,134 µatm) and CO₂ air–water flux (714 mm m^?2 d^?1). Large variability in BGE and BP/PP ratios especially during MN led to high bacteria-mediated carbon fluxes which was evident from significantly high bacterial carbon demand (BCD >100% of PP) during this season. This suggested that the net amount of organic carbon (either dissolved or particulate form) synthesized by primary producers in the lagoon was not sufficient to satisfy the bacterial carbon requirements. Lagoon sustained low to moderate autotrophic–heterotrophic coupling with annual mean BCD of 231% relative to the primary production, which depicted that bacterioplankton are the mainstay of the lagoon biogeochemical cycles and principal players that bring changes in trophic status. Study disclosed that the high CO₂ supersaturation and oxygen undersaturation during MN was attributed to the increased heterotrophic respiration (in excess of PP) fuelled by allochthonous organic matter. On a spatial scale, lagoon sectors such as south sector, central sector and outer channel recorded “net autotrophic,” while the northern sector showed “net heterotrophic” throughout the study period.     

Methanogenesis in Arizona,USA dryland streams

Methanogenesis was studied in five streams of central and southern Arizona by examining the distribution of methane in interstitial water and evasion of methane in three subsystems (hyporheic, parafluvial and bank sediments). In Sycamore Creek, the primary study site (studied during summer and early autumn), methane content of interstitial water exhibited a distinct spatial pattern. In hyporheic (sediments beneath the wetted channel) and parfluvial zones (active channel sediments lateral to the wetted channel), which were well oxygenated due to high hydrologic exchange with the surface stream and had little particulate organic matter (POM), interstitial methane concentration averaged only 0.03 mgCH₄-C/L. Bank sediments (interface between the active channel and riparian zone), in contrast, which were typically vegetated, had high POM, low hydrologic exchange and concomitantly low dissolved oxygen levels, had interstitial concentration averaging 1.5 mgCH4-C/L. Methane emission from Sycamore Creek, similar to methane concentration, averaged only 3.7 mgCH₄-C·m⁻²·d⁻¹ from hyporheic and parafluvial zones as opposed to 170 mgCH₄-C·m⁻²·d⁻¹ from anoxic bank sediments. Methane in four additional streams sampled (one sampling date during late winter) was low and exhibited little spatial variation most likely due to cooler stream temperatures. Interstitial methane in parafluvial and bank sediments of all four streams ranged from only 0.005 to 0.1 mgCH₄-C/L. Similarly methane evasion was also low from these streams varying from 0 to 5.7 mgCH₄-C·m⁻²·d⁻¹. The effects of organic matter and temperature on methanogenesis were further examined by experimentally manipulating POM and temperature in stoppered flasks filled with hyporheic sediments and stream water. Methane production significantly increased with all independent variables. Methane production is greatest in bank sediments that are relatively isolated hydrologically and lowest in hyporheic and parafluvial sediments that are interactive with the surface stream.     

Responses of intertidal nematodes to short-term anoxic events

We investigated tolerance to, and activity of, nematodes in hypoxic and anoxic/partially sulphidic conditions and their ability for recovery after reoxygenation of anoxic sediment. To this end, sediments from an intertidal flat were incubated under oxic, suboxic and anoxic/partially sulphidic conditions for a 14-day period and the final density of nematodes, as a group, and of the most abundant species were assessed. In one treatment, oxygen was restored after anoxic incubation. The incorporation of ¹³C, originating from labeled algae added on top of the sediment, was taken as an indication of nematode activity.Short-term suboxic and anoxic/partially sulphidic conditions had similar structuring impact on the nematode community, reducing total densities by about one third. Survival in suboxic and anoxic/partially sulphidic conditions was species-specific. Daptonema setosum, D. tenuispiculum and Chromadora macrolaima, dominant in the oxic incubation, disappeared when the oxygen level was reduced. The density of the other dominant species was slightly reduced (Sabatieria pulchra), similar (Terschellingia communis) or even increased in the suboxic and anoxic conditions (Metachromadora vivipara). The activity level of these three species was, however, reduced under oxygen limitation. Our results are discussed in terms of the life-history strategies of these species.     

Microplankton respiratory activity and CO2 production rates in the Otranto Strait (Mediterranean Sea)

Respiratory activity and metabolic CO₂production of the microplankton in the Otranto Strait (Mediterranean Sea) were determined by monitoring the Electron Transport System activity. Ten stations were repeatedly investigated during two oceanographic surveys in February–March and August 1994. Respiratory activity and CO₂ production, estimated from the surface to the bottom, were higher in the euphotic layers (0-200 m) during summer (mean values: Winter = 0.024 μg C h⁻¹ dm⁻³; Summer = 0.042 μg C h⁻¹ dm⁻³); in the aphotic zone (deeper than 200 m), the rates were similar throughout different seasons (0.013 and 0.014 μg C h⁻¹ dm⁻³, respectively). A comparison with data collected by other authors from the euphotic layers of the Mediterranean Sea was made. Respiratory activities decreased from Western to Eastern Mediterranean Basins. The values of CO₂ production, integrated between 200 and 1000 m in the Otranto Strait (mean value 237.7 mg C m⁻² d⁻¹), were compared with other data collected from the Mediterranean Sea as well as from the Pacific, Atlantic and Indian Oceans. The comparison showed the Otranto Strait to be a site of organic matter oxidation. This revised version was published online in August 2006 with corrections to the Cover Date.     

Phytoplankton of shallow lakes: Seasonal succession, standing crop and the chief determinants of primary productivity, 1. Cooking Lake, Alberta, Canada

Cooking Lake (113°02′W, 53°26′N), a well-mixed, shallow (mean depth (1.59 m), eutrophic lake in Alberta, Canada, is characterized by eutrophic chlorococcalean and cyanophycean phytoplankton associations, and little change in standing crop with increasing depth. Standing crop and primary productivity are low during the winter but pronounced spring and summer maxima occur. Mean yearly areal standing crop (ΔB) and primary productivity (ΔA) were 212.4 mg m^?2 chlorophyll a and 301.8 mg C h^?1 m^?2 respectively. Annual productivity was estimated at 1322 g C m^?2. The mean increase in the extinction coefficient (?) per unit increase in standing crop (B) was 0.03 In units m^?1. High non-algal light attenuation (?_q) occurred avenging 41 which prevented the ratio B/? from attaining more than 65% of the theoretical maximum except once when algal self-shading occurred. Close correlations existed between B (mg m^?3 chlorophyll a) and A _max (mg h_?1 m_?3) ΔA and ΔB, ΔA and B, A_max, and A_max/?, and ΔA and I_o′, (W m^?2). The depth of the euphotic zone (Z_eu) varied between 0.5 and 1 25 m; the average relationship between z_eu and E was Z_eu= 3.74/?, and the mean standing Crop found in the euphotic zone represented 55.2% of the theoretical maximum, The high ?_q, values made the model of Tailing (1957) inapplicable to Cooking Lake. The Q₁₀ value for the lake was 2.2. The maximum rate of photosynthesis per unit of population per h. Ø^max, (mg C sag chlorophyll a_?1 h_?1) was more closely related to temperature than irradiance and ma depressed by pH values greater than 9.1. Growth of the phytoplankton was not nutrient limited: instead irradiance and temperature were more important. Indirect evidence that free CO₂ limited photosynthetic rates, is provided by the Ø_max: pH relationship.     

Porewater nutrient profiles and nutrient sediment–water exchange in a tropical mangrove waterway, Mapopwe Creek, Chwaka Bay, Zanzibar

Sediments were examined in the Mapopwe Creek, a tidally dominated mangrove waterway in the Chwaka Bay mangrove forest, Zanzibar, to assess their significance in the nutrient dynamics of the mangrove forest and the adjacent bay. Porewater concentrations of dissolved ammonium and that of soluble reactive phosphorus (SRP) were generally higher during the dry season than during the wet season. NO₃^? plus NO₂^? concentration averaged 1 µm and did not vary much between the two periods. Fluxes of ammonium ranged from ?575 to 523 µm m^?2 h^?1 and those of SRP from ?55.7 to 69.5 µm m^?2 h^?1. Measurements of NO_x did not show any consistent fluxes of this dissolved nitrogen species. Variations of flux rates between the two seasons were not significant even though there were small variations in the flux direction in both nutrients. Results imply that Mapopwe sediments are a source of NH₄⁺ but act as a sink for SRP.     

The physical, chemical and biological characteristics of the holomictic sulphated Lake Arcas-2 (Cuenca, Spain)

The main limnological features of Lake Arcas-2 were followed through two consecutive stratification periods. Its morphometrical characteristics, such as the high relative depth (31%) and steep basin walls, enhance the sharp water stratification with the formation of an oxic-anoxic boundary at 8.8–9 m and a sulphide-rich hypolimnion during the thermal stagnation. The ionic sequence was SO ₄ ^2- >Alkal.>Cl^- and Ca²⁺>Mg²⁺>Na⁺>K⁺ and the mineralization was high, with water conductivity higher than 2500 S cm^-1. It is mesotrophic with epilimnetic chlorophyll a concentrations of 2–5 g l^-1 and metalimnetic of 8 g l^-1. The depth of the euphotic zone was established at around 8 m. Phosphorus concentration in the oxic waters was low but largely accumulated in the anoxic hypolimnion, together with other compounds such as ammonium, silicate, sulphide, etc. Nitrate was abundant in the oxic waters and is related to the use of fertilizers in the surrounding fields. A fine-layer sampler was used to study the oxic–anoxic interface where a dense plate of Chromatiaceae developed. The dominant species, Chromatium weissei, reached a maximum integrated biomass of 121 gWW m^-2 during August. Thiocapsa sp., representing less than 1% of total purple bacteria, had an integrated biomass of 0.8 gWW m^-2 and Amoebobacter sp. (1%) had 1 gWW m^-2. Other populations were sharply stratified i.e. Oscillatoria cf. ornata and Cryptomonas erosa. Those organisms, and mainly the cyanobacterium, accounted for the high chlorophyll a concentrations (>100 g l^-1) recorded in the anoxic waters of the hypolimnion. Green bacteria were scarcely developed due to the shadowing effect caused mainly by the purple bacterial bloom.     

EFFECTS OF ENVIRONMENTAL VARIATION ON SINKING RATES OF MARINE PHYTOPLANKTON1

The effects of environmental variables, particularly irradiance, on the sinking rates of phytoplankton were investigated using cultures of Chaetoceros gracilis Schütt and C. flexuosum Mangin in laboratory experiments; these data were compared with results from assemblages in the open ocean and marginal ice zone of the Greenland Sea. In culture experiments both the irradiance under which the diatom was grown and culture growth rate were positively correlated with sinking rates. Sinking rates (ψ) in the Greenland Sea were smallest when determined from chlorophyll (mean ψ_chl= 0.14 m · d^?1) and biogenic silica (ψ_si= 0.14 m · d^?1) and greatest when determined from particulate carbon (ψ_c= 0.55 m · d^?1) and nitrogen (ψ_N= 0.64 m · d^?1). Field measurements indicated that variations in sinking may be associated with changes in irradiance and nitrate concentrations. Because these factors do not directly affect water density, they must be inducing physiological changes in the cell which affect buoyancy. Although a direct response to a single environmental variable was not always evident, sinking rates were positively correlated with growth rates in the marginal ice zone, further indicating a connection to physiological processes. Estimats of carbon flux at stations with vertically mixed euphotic zones indicated that approximately 30% of the daily primary production sank from the euphotic zone in the form of small particulates. Calculated carbon flux tended to increase with primary productivity.     

Acantharian abundance and symbiont productivity at the VERTEX seasonal station

The abundances of acantharians and the carbon fixation ratesof their symbiotic algae were measured over an 18 month periodat the VERTEX seasonal station, 1400 km west of Monterey, CA.Abundances varied up to 4 1 acantharians l^–1, with thehighest values in the upper euphotic zone. Integrated abundancesvaried seasonally by a factor of two and were highest (<170000 acantharians m^–2) in the summer and fall The biomassof acantharians (estimated from cell volume) ranged from 6.8to 56.7 mg C m^–2 and did not exhibit a seasonal pattern.The mean number of symbiotic algae per acantharian averaged14 7 and varied between 11 and 23 on different cruises. Approximatelyhalf of the acantharians at this station had symbiotic algae.Carbon fixation rates of the acantharian symbionts were highestnear the surface (maximum rate of 26.7 ng C acantharian^–1day^–1) and declined exponentially with depth. In the upper20 m, symbiont carbon fixation in acantharians was >4% ofthe total primary production and between 6 and 35% of the primaryproduction by plankton larger than 100 µm Exports of acanthariansfrom the euphotic zone by the sinking of intact cells were atleast 2–6% of the standing stock per day and would representup to 9% of the total sinking organic carbon flux. These ratesof carbon exports are comparable to the rate of carbon fixationby the symbionts in the acantharian population     

Relevance of bacterioplankton abundance and production in the oligotrophic equatorial Indian Ocean

Bacterioplankton abundance and production, chlorophyll a (Chl a) concentrations and primary production (PP) were measured from the equatorial Indian Ocean (EIO) during northeast (NEM), southwest (SWM) and spring intermonsoon (SpIM) seasons from 1°N to 5°S along 83°E. The average bacterial abundance was 0.52 ± 0.29, 0.62 ± 0.33 and 0.46 ± 0.19 (× 10⁸ cells l⁻¹), respectively during NEM, SWM and SpIM in the top 100 m. In the deep waters (200 m and below), the bacterial counts averaged ∼0.35 ± 0.14 × 10⁸ cells l⁻¹ in SWM and 0.39 ± 0.16 × 10⁸ cells l⁻¹ in SpIM. The 0–120 m column integrated bacterial production (BP) ranged from 19 to 115 and from 10 to 51 mg C m⁻² d⁻¹ during NEM and SWM, respectively. Compared with many open ocean locations, bacterial abundance and production in this region are lower. The bacterial carbon production, however, is notably higher than that of phytoplankton PP (BP:PP ratio 102% in SWM and 188% in NEM). With perpetually low PP (NEM: 20, SWM: 18 and SpIM: 12 mg C m⁻² d⁻¹) and Chl a concentration (NEM: 16.5, SWM: 15.0 and SpIM: 20.9 mg m⁻²), the observed bacterial abundance and production are pivotal in the trophodynamics of the EIO. Efficient assimilation and mineralization of available organics by bacteria in the euphotic zone might serve a dual role in the ultra-oligotrophic regions including EIO. Thus, bacteria probably sustain microheterotrophs (micro- and meso-zooplankton) through microbial loop. Further, rapid mineralization by bacteria will make essential nutrients available to autotrophs.     

Winter limnology: a comparison of physical,chemical and biological characteristics in two temperate lakes during ice cover

The winter dynamics of several chemical, physical, and biological variables of a shallow, polymictic lake (Opinicon) are compared to those of a deep, nearby dimictic lake (Upper Rock) during ice cover (January to early April) in 1990 and 1991. Both lakes were weakly inversely thermally stratified. Dissolved oxygen concentration was at saturation (11–15 mg l⁻¹) in the top 3 m layer, but declined to near anoxic levels near the sediments. Dissolved oxygen concentrations in the deep lake were at saturation in most of the water column and approached anoxic levels near the sediments only. Nutrient concentrations in both lakes were fairly high, and similar in both lakes during ice cover. Total phosphorus concentrations generally ranged between 10–20 μg l⁻¹, NH₄-N between 16–100 μg l⁻¹, and DSi between 0.9–1.9 mg l⁻¹; these concentrations fell within summer ranges. NO₃-N concentrations were between 51–135 μg l⁻¹ during ice cover, but occurred at trace concentrations (<0.002 μg l⁻¹) during the summer. The winter phytoplankton community of both lakes was dominated by flagellates (cryptophytes, chrysophytes) and occasionally diatoms. Dinoflagellates, Cyanobacteria and green algae were poorly represented. Cryptophytes often occurred in fairly high proportions (20–80%) throughout the water column, whereas chrysophytes were more abundant just beneath the ice. Zooplankton population densities were extremely low during ice cover (compared to maximum densities measured in spring or summer) in both lakes, and were comprised largely of copepods.     

Analysis of the binding of phenylalanine to phenylalanyl-tRNA synthetase

Using the complete rate equation for the PP_i-ATP exchange reaction at equilibrium, the dissociation constants of phenylalanine (10^?5m), phenylalanine butyl ester (8 × 10^?5m), benzyl alcohol (6 × 10^?4m), phenylalaninol (2 × 10^?4m), hydrocinnamic acid (3 × 10^?3m) and glycine (>1 m) with the phenylalanyl-tRNA synthetase (Escherichia coli K12) were determined. Taking the model of Koshland (1962) for the estimation of the configurational free energy change due to proximity and orientation, and decomposing the process of binding into several thermodynamic steps, the contribution to binding of the benzyl group, glycine unit, protonated amino group, carboxylate group and joint interactions were estimated. The results are: (1) the standard free energy contributions for binding phenylalanine are benzyl group (?8.2 kcal/mol), glycine unit (?2.5 kcal/mol), protonated amino group (?0.8 kcal/mol) and carboxylate group (1 kcal/mol). (2) The standard free energy change due to the change in the interaction between the protonated amino group and carboxylate group when they are transferred from the aqueous environment to the enzyme environment is ?2.7 kcal/mol. (3) A dissociation constant for glycine of 7.5 m is calculated without the hypothesis that a conformational change occurs in the enzyme when the benzyl unit of phenylalanine binds, permitting an interaction of the enzyme with the protonated amino and/or carboxylate groups.The detection of E·AA² and E·ATP shows that a sequential addition of substrates is not necessary for binding. A comparison of the dissociation constants of E·AA (10^?5m), E·ATP (1.5 × 10^?3m), E·PP (5.5 × 10^?4m), E·I (8 × 10^?5m) and the mixed complexes E·I·ATP (6 × 10^?8m²), E·I·PP (5 × 10^?8m²) and E·AA·PP (7 × 10^?9m²), with phenylalanine butyl ester as the inhibitor, indicates no strong interaction between the binding of ATP or PP_i with the binding of phenylalanine.     

The interaction of components controlling net phytoplankton photosynthesis in a well-mixed lake (Lough Neagh, Northern Ireland)

The homogeneous distribution of the phytoplankton in a shallow (mean depth 8·6 m) unstratified lake, L. Neagh, Northern Ireland, facilitated the study of the interaction of components controlling gross photosynthesis per unit area. These included the photosynthetic capacity, the phytoplankton content of the euphotic zone, and a logarithmic function describing the effective radiation input. These factors were analysed for two sites, the open lake and Kinnego Bay, which respectively had standing crops of up to 90 and 300 mg chlorophyll a m^?3 and maximum daily rates of gross integral photosynthesis of 11·7 and 15·6 g O₂ m^?2 day^?1. Values are reduced by the high contribution to light attenuation by non-algal sources, which increases at low standing crops particularly in winter, when values of integral photosynthesis decrease to 0·5 g O₂ m^?2 day^?1. This relative change is the result of self-shading behaviour of the phytoplankton altering the crop content of the euphotic zone at different population densities. Changes in the irradiance function, incorporating day length, are largely responsible for the changes in daily rates of integral gross photosynthesis; as daily irradiance is also a determinant of water temperature, it exerts further influence through the photosynthetic capacity which was strongly correlated with temperature. Much of the gain in gross photosynthesis resulting from higher photosynthetic capacity may not be reflected in a higher net column photosynthesis, because of the greater proportional rise in respiration with temperature. The balance in the water column between respiration losses and photosynthetic input may frequently alter since the ratio of illuminated to dark zones is between 1/4 to 1/5 in the open lake, and small shifts in any of the controlling features may result in conditions unfavourable for growth. This is analysed especially for the increase of diatoms in spring, when small modifications of the underwater light field can delay growth.