Temporal variation in dwarf sperm whale (Kogia sima) habitat use and group size off Great Abaco Island, Bahamas

Dwarf sperm whales (Kogia sima) are among the most commonly stranded yet least known pelagic cetaceans. Few studies have occurred at sea, and none have quantified temporal and spatial variation in dwarf sperm whale abundance and group size. We assessed seasonal and spatial variation in dwarf sperm whale group size and abundance off Great Abaco Island, Bahamas using surveys within a 126 km² study area with depths between 2 and 1,600 m. After correcting for survey effort and variation in sighting efficiency among sea states, we found that dwarf sperm whale group size and habitat use varied seasonally. In summer, dwarf sperm whale groups were small (median = 2.5, range = 1–8) and were found only in the two deep habitats within the study area (slope 400–900 m, deep 900–1,600 m). In winter, group sizes increased (median = 4, range = 1–12) and sightings were almost six times higher in the slope habitat, where vertical relief is highest, than other habitats. Our results suggest that studies of pelagic cetaceans and conservation plans must explicitly account for seasonal variation in group size and habitat use.     

Isotopic niche width differentiation between common bottlenose dolphin ecotypes and sperm whales in the Gulf of California

World populations or stock distinction of Tursiops truncatus has been difficult to assess, because of large variations in morphology, habitat, feeding habits, and social structure among areas, which may reflect phylogenetic segregation or ecological plasticity. In the Gulf of California, Mexico, two common bottlenose dolphin ecotypes (inshore and offshore) have been reported. The offshore ecotype is frequently observed in association with sperm whales (Physeter macrocephalus) but the reason for this is still unknown. To explore the degree of resource partitioning/overlap between these species and stocks, we used skin stable isotope values (δ¹³C, δ¹⁵N) to estimate quantitative metrics of isotopic niche width (Bayesian standard ellipse areas, SEA_B) and estimated their diet composition using Bayesian isotopic mixing models. The inshore ecotype in different regions (north, central, and south) of the Gulf of California exhibited distinct δ¹⁵N values and SEA_B, suggesting a latitudinal gradient in nitrogen sources of coastal localities. The SEA_B of inshore and offshore bottlenose dolphin ecotypes was completely distinct, indicating resource partitioning. Associated offshore ecotype and sperm whales had overlapping SEA_B. The isotopic mixing model indicates that a considerable proportion of both species’ diet is large Humbolt squid. Our results suggest that resource partitioning and species association are two strategies that bottlenose dolphin ecotypes use in this zone.     

PYGMY SPERM WHALES KOGIA BREVICEPS IN THE NORTHEAST ATLANTIC: NEW INFORMATION ON STOMACH CONTENTS AND STRANDINGS

Little is known about the feeding ecology of pygmy sperm whales ( Kogia breviceps ) in the Northeast Atlantic. Results are presented on the stomach contents of five whales stranded on the Galician coast (NW Spain) between 1995 and 2002 and seven whales stranded on the French Atlantic coast between 1984 and 2001. These results are compared with those obtained from the stomach contents of two pygmy sperm whales (a pregnant female and her calf ) stranded on the Scottish (UK) coast in 1999, the first records of the species in Scotland. In 13 out of 14 cases, food remains consisted almost entirely of cephalopod beaks, although some crustacean and fish remains were also present. In all the Spanish specimens, the identified prey were oceanic species: the cephalopods Histioteuthis reversa , H. bonnellii , Todarodes sagittatus , the viperfish Chauliodus sloani , and the giant mysid Gnatophausia sp. The same cephalopod species were found in the stomachs of the whales stranded in Scotland, although both whales had also consumed neritic cephalopod species such as Rossia macrosoma and other sepiolids. In the French specimens, almost all prey identified were oceanic cephalopods ( H. reversa , Brachioteuthis riseii , T. sagittatus , Taonius pavo , etc. ), but remains of crustaceans and a neritic squid ( Loligo forbesi ) were also found. One whale from France had eaten mainly Henslow's swimming crab ( Polybius henslowi ). Results from the present study are consistent with those found by other authors in the Azores and the Canary Islands in that pygmy sperm whales appear to be mainly teuthophagous, with histioteuthid squids forming an important part of the diet. Strandings records suggest that occurrence of pygmy sperm whales in the NE Atlantic may be seasonal, with most strandings occurring in autumn and winter.     

Cephalopod remains from stomachs of sperm whales (Physeter macrocephalus) that mass‐stranded along the Oregon coast

On 16 June 1979, a herd of 41 sperm whales stranded near the mouth of the Siuslaw River in Florence, Oregon. The stomach contents from 32 whales were collected, identified to the lowest taxonomic level possible, enumerated, and measured. A total of 20,247 cephalopod lower beaks that represented 24 species from 14 different families were recovered. The most numerous species were Histioteuthis hoylei (25.9%), Taonius borealis (12.9%), Galiteuthis phyllura (11.2%), Gonatopsis/Berryteuthis type (10.9%), and Moroteuthis robusta (10.7%). Reconstructed estimates of mass indicated that M. robusta contributed almost 50% of the total mass of cephalopods consumed, followed by H. hoylei (19.3%), and T. borealis (7.0%). The most important species in the diet of stranded whales were M. robusta, H. hoylei, T. borealis, G. phyllura, Octopoteuthis deletron, and Gonatopsis/Berryteuthis type. There were significant differences in the diet of males and females, but no differences between sperm whales of different age groups. Overall, sperm whales primarily consumed small cephalopods that were likely eaten south of 45ºN in or near the California Current System. This study provides new estimates of the food habits of sperm whales in the northeast Pacific from one of the largest strandings of this species.     

The diet of pygmy sperm whales, Kogia breviceps, stranded in New Zealand: implications for conservation

The stomach contents of 27 pygmy sperm whales, Kogia breviceps, stranded on New Zealand beaches between 1991 and 2003 are reported. These individuals comprise 16 males, 10 females, and one for which no sex information is available. The diet was found to include fish and crustaceans, but is comprised primarily of cephalopods, with 0–526 lower beaks, representing an estimated maximum of c. 60 kg of cephalopod prey consumed by any one whale. Cephalopod prey is attributed to 23 species from 13 families, and is dominated by juvenile individuals of the families Histioteuthididae and Cranchiidae (adults of which usually occur at depths exceeding 400 m). Perceived threats to this whale, particularly those affecting distribution and abundance of prey species, are also discussed. These are the first data reporting the diet of this whale species in New Zealand waters. A comparison of the diet of K. breviceps is made with that of the sperm whale, Physeter macrocephalus from New Zealand waters, and with the diet of Kogia known elsewhere.     

BILIARY BILE ACID COMPOSITION OF THE PHYSETERIDAE (SPERM WHALES)

Abstract: The bile acid composition of bile obtained from the hepatopancreatic ducts of three species of sperm whales (Cetacea: Physeteridae) was investigated. Bile acids were isolated by adsorption chromatography and analyzed by sequential HPLC, SIMS, and GLC-MS. In each species the dominant bile acids were deoxycholic acid (a secondary bile acid formed by bacterial 7α-dehydroxylation of cholic acid), and chenodeoxycholic acid (a primary bile acid) which together composed more than 86% of biliary bile acids in all three species. In Physeter catodon (sperm whale) deoxycholic acid constituted 79%, and in Kogia breviceps (pygmy sperm whale) it was 61% of biliary bile acids. The sperm whale, which differs from other whales in having a remnant of a large intestine, is the second mammal identified to date in which deoxycholic acid is the predominant bile acid. The high proportion of deoxycholic acid indicates that in the Physeteridae, anaerobic fermentation occurs in its cecum, and that bile acids undergo enterohepatic cycling. Also found were minor proportions of cholic acid, as well as bacterial derivatives of chenodeoxycholic acid (ursodeoxycholic acid, lithocholic acid, and the 12β-epimer of allo-deoxycholic acid). Bile acids were conjugated with taurine in all species; however, in the sperm whale ( Physeter ) glycine conjugates were present in trace proportions. The bile acid hydroxylation pattern (12α- but not 6α-hydroxylation), lack of primary 5α- (allo) bile acids, and presence of glycine conjugated bile acids suggests the possibility that sperm whales originated from ancient artiodactyls.     

The diets of humpback whales (Megaptera novaeangliae) on the shelf and oceanic feeding grounds in the western North Pacific inferred from stable isotope analysis

Humpback whales feed on a variety of prey, but significant differences likely occur between regional feeding grounds. In this study, the diets of humpback whales were analyzed by comparing stable isotope ratios in animal tissues at three humpback whale feeding grounds in the Russian Far East: Karaginsky Gulf, Anadyr Gulf, and the Commander Islands. Anadyr Gulf is a neritic zone far from a shelf break, Karaginsky Gulf is a neritic zone close to a shelf break, and the Commander Islands represent an open oceanic ecosystem where whales feed off the shelf break. Samples from the Commander Islands had the lowest mean δ¹³C and δ¹⁵N values (mean ± SE: δ¹³C = ?18.7 ± 0.1, δ¹⁵N = 10.4 ± 0.1) compared to the samples from Karaginsky Gulf (δ¹³C = ?17.2 ± 0.1, δ¹⁵N = 12.7 ± 0.2) and Anadyr Gulf (δ¹³C= ?17.8 ± 0.1, δ¹⁵N = 14.0 ± 0.4). The samples from Anadyr Gulf had the highest δ¹⁵N values, while the samples from Karaginsky Gulf had the highest δ¹³C values. Both δ¹³C and δ¹⁵N values differed significantly among all three areas. Our data support the hypothesis that humpback whales tend to feed on fish in neritic areas and on plankton in deep oceanic waters.     

Isotopic niche differs between seal and fish‐eating killer whales (Orcinus orca) in northern Norway

Ecological diversity has been reported for killer whales (Orcinus orca) throughout the North Atlantic but patterns of prey specialization have remained poorly understood. We quantify interindividual dietary variations in killer whales (n = 38) sampled throughout the year in 2017–2018 in northern Norway using stable isotopic nitrogen (δ¹⁵N: ¹⁵N/¹⁴N) and carbon (δ¹³C: ¹³C/¹²C) ratios. A Gaussian mixture model assigned sampled individuals to three differentiated clusters, characterized by disparate nonoverlapping isotopic niches, that were consistent with predatory field observations: seal‐eaters, herring‐eaters, and lumpfish‐eaters. Seal‐eaters showed higher δ¹⁵N values (mean ± SD: 12.6 ± 0.3‰, range = 12.3–13.2‰, n = 10) compared to herring‐eaters (mean ± SD: 11.7 ± 0.2‰, range = 11.4–11.9‰, n = 19) and lumpfish‐eaters (mean ± SD: 11.6 ± 0.2‰, range = 11.3–11.9, n = 9). Elevated δ¹⁵N values for seal‐eaters, regardless of sampling season, confirmed feeding at high trophic levels throughout the year. However, a wide isotopic niche and low measured δ¹⁵N values in the seal‐eaters, compared to that of whales that would eat solely seals (δ_N‐measured = 12.6 vs. δ_N‐expected = 15.5), indicated a diverse diet that includes both fish and mammal prey. A narrow niche for killer whales sampled at herring and lumpfish seasonal grounds supported seasonal prey specialization reflective of local peaks in prey abundance for the two fish‐eating groups. Our results, thus, show differences in prey specialization within this killer whale population in Norway and that the episodic observations of killer whales feeding on prey other than fish are a consistent behavior, as reflected in different isotopic niches between seal and fish‐eating individuals.     

Evidence of two subaggregations of humpback whales on the Kodiak,Alaska, feeding ground revealed from stable isotope analysis

Knowledge of humpback whale (Megaptera novaeangliae) foraging on feeding grounds is becoming increasingly important as the growing North Pacific population recovers from commercial whaling and consumes more prey, including economically important fishes. We explored spatial and temporal (interannual, within‐season) variability in summer foraging by humpback whales along the eastern side of the Kodiak Archipelago as described by stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope ratios of humpback whale skin (n = 118; 2004–2013). The trophic level (TL) of individual whales was calculated using basal food web δ¹⁵N values collected within the study area. We found evidence for the existence of two subaggregations of humpback whales (“North,” “South”) on the feeding ground that fed at different TLs throughout the study period. Linear mixed models suggest that within an average year, Kodiak humpback whales forage at a consistent TL during the feeding season. TL estimates support mixed consumption of fish and zooplankton species in the “North” (mean ± SE; 3.3 ± 0.1) and predominant foraging on zooplankton in the “South” (3.0 ± 0.1). This trend appears to reflect spatial differences in prey availability, and thus, our results suggest North Pacific humpback whales may segregate on feeding aggregations and target discrete prey species.     

Ocean nomads: Distribution and movements of sperm whales in the North Pacific shown by whaling data and Discovery marks

We investigated the distribution and movements of sperm whales (Physeter macrocephalus) in the North Pacific by analyzing whaling data and movement data of whales marked with Discovery marks. Prior studies suggested that there were discrete “stocks” of sperm whales, assuming that the intervals between historical areas of concentration indicated subpopulation boundaries. Our analyses clearly refute this assumption: whaling and marking data suggest no obvious divisions between separate demes or stocks within the North Pacific. Sperm whales appear to be nomadic and show widespread movements between areas of concentration, with documented movements of over 5,000 km, time spans between marking and recovery over 20 yr, and ranges that cover many thousand km². Males appear to range more widely than females. Sperm whales likely travel in response to geographical and temporal variations in the abundance of medium‐ and large‐sized pelagic squids, their primary prey. Our analyses demonstrate that males and females concentrated seasonally in the Subtropical Frontal Zone (ca. 28ºN–34ºN) and the Subarctic Frontal Zone (ca. 40ºN–43ºN), and males also concentrated seasonally near the Aleutian Islands and along the Bering Sea shelf edge. It appears that the sperm whales targeted by the pelagic whalers range widely across this ocean basin.     

Using dive behavior and active acoustics to assess prey use and partitioning by fin and humpback whales near Kodiak Island,Alaska

Near the Kodiak Archipelago, fin (Balaenoptera physalus) and humpback (Megaptera novaeangliae) whales frequently overlap spatially and temporally. The Gulf Apex Predator‐prey study (GAP) investigated the prey use and potential prey partitioning between these sympatric species by combining concurrent analysis of vertical whale distribution with acoustic assessment of pelagic prey. Acoustic backscatter was classified as consistent with either fish or zooplankton. Whale dive depths were determined through suction cup tags. Tagged humpback whales (n = 10) were most often associated with distribution of fish, except when zooplankton density was very high. Associations between the dive depths of tagged fin whales (n = 4) and the vertical distribution of either prey type were less conclusive. However, prey assessment methods did not adequately describe the distribution of copepods, a potentially significant resource for fin whales. Mean dive parameters showed no significant difference between species when compared across all surveys. However, fin whales spent a greater proportion of dive time in the foraging phase than humpbacks, suggesting a possible difference in foraging efficiency between the two. These results suggest that humpback and fin whales may target different prey, with the greatest potential for diet overlap occurring when the density of zooplankton is very high.     

Fine‐scale spatial differences in humpback whale diet composition near Kodiak,Alaska

On the North Pacific feeding grounds, humpback whales (Megaptera novaeangliae) are recovering from commercial whaling at a rapid rate (6.8%). The potential effect that this recovery will have on trophic dynamics involving these predators is currently unknown. To better elucidate complex trophic dynamics, variability in diet composition of apex predators on their respective feeding grounds needs to be understood. Thus, we explored the diet composition of two defined subaggregations of humpback whales of the Kodiak Archipelago population (“North,” “South”) using stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope ratios of humpback whale skin and regional prey samples in Bayesian dietary mixing models. Humpback whales in the “North” region consumed proportionally more fish, dominated by capelin (Mallotus villosus), whereas, whales in the “South” region consumed predominantly krill. The difference in diet composition appears to reflect regional differences in prey availability. Thus, regional variability in diet composition by humpback whales may have disproportionate impacts on prey resources of sympatric predators depending on available prey biomass. As a result, we suggest fine‐scale studies of apex predator diets are needed to better model trophic dynamics with accuracy.     

Prey preferences of sympatric fin (Balaenoptera physalus) and humpback (Megaptera novaeangliae) whales revealed by stable isotope mixing models

Over‐exploitation of top predators and fish stocks has altered ecosystems towards less productive systems with fewer trophic levels. In the Celtic Sea (CS), discards and bycatch levels have prompted concern about some fisheries, while fin and humpback whales are recovering from centuries of over‐exploitation. A lack of empirical evidence on the preferred diet of some predators such as whales in the CS has hindered the implementation of effective conservation measures using an ecosystem‐based approach to fisheries management. Using a Bayesian framework (SIAR), stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotope mixing models were used to assign proportionate diet solutions to fin and humpback whales (skin biopsies) and putative prey items: herring (Clupea harengus), sprat (Sprattus sprattus), and krill (Meganyctiphanes norvegica and Nyctiphanes couchii) in the CS. Krill was the single most important prey item in the diet of fin whales, but one of the least important for humpback whales (albeit based on a small sample of humpback whale samples). Age 0 sprat and herring comprised a large proportion of the diet of both species, followed by older sprat (age 1–2) and older herring (age 2–4). An ecosystem based approach to fisheries management will be required in the CS if we seek effective conservation of both fin and humpback whales, and sustainable fisheries.     

Domoic acid exposure in pygmy and dwarf sperm whales (Kogia spp.) from southeastern and mid-Atlantic U.S. waters

The neurotoxin domoic acid (DA) was detected in urine and fecal samples recovered from pygmy sperm whales (Kogia breviceps) and dwarf sperm whales (Kogia sima) stranding along the U.S. Atlantic coast from 1997 to 2008. Of the 41 animals analyzed from Virginia, North Carolina, South Carolina and Florida, 24 (59%) tested positive for DA at concentrations of 0.4–1.8 ng/mL in urine and 12–13,566 ng/g in feces as determined by liquid chromatography–tandem mass spectrometry (LC–MS/MS). Feces appeared to be the best indicator of DA exposure in Kogia spp., with 87% of all fecal samples analyzed testing positive for this toxin. Additional stranded animals (n = 40) representing 11 other cetacean species were recovered from the same region between 2006 and 2008 and analyzed by LC–MS/MS, however DA was not detected in any of these individuals. DA is produced naturally by diatoms in the genus Pseudo-nitzschia. Although blooms of DA-producing Pseudo-nitzschia have been associated with repeated large-scale marine mammal mortalities on the west coast of the U.S., there is no documented history of similar blooms on the southeast U.S. coast, and there were no observed Pseudo-nitzschia blooms in the region associated with any of these strandings. The feeding habits of Kogia spp. are poorly documented; thus, the vector(s) for DA exposure to these deep-diving species remains to be identified. Toxin accumulation in these pelagic whale species may be an indication of cryptic harmful algal bloom activity in offshore areas not currently being monitored. This study highlights the need for a better understanding of the role of toxigenic algae in marine mammal morbidity and mortality globally.     

Climate change alters the trophic niche of a declining apex marine predator

Changes in the world's oceans have altered nutrient flow, and affected the viability of predator populations when prey species become unavailable. These changes are integrated into the tissues of apex predators over space and time and can be quantified using stable isotopes in the inert feathers of historical and contemporary avian specimens. We measured δ¹³C and δ¹⁵N values in Flesh‐footed Shearwaters (Puffinus carneipes) from Western and South Australia from 1936–2011. The Flesh‐footed Shearwaters more than doubled their trophic niche (from 3.91 ± 1.37 ‰² to 10.00 ± 1.79 ‰²), and dropped an entire trophic level in 75 years (predicted δ¹⁵N decreased from +16.9 ‰ to + 13.5 ‰, and δ¹³C from ?16.9 ‰ to ?17.9 ‰) – the largest change in δ¹⁵N yet reported in any marine bird, suggesting a relatively rapid shift in the composition of the Indian Ocean food web, or changes in baseline δ¹³C and δ¹⁵N values. A stronger El Niño‐Southern Oscillation results in a weaker Leeuwin Current in Western Australia, and decreased Flesh‐footed Shearwater δ¹³C and δ¹⁵N. Current climate forecasts predict this trend to continue, leading to increased oceanic ‘tropicalization' and potentially competition between Flesh‐footed Shearwaters and more tropical sympatric species with expanding ranges. Flesh‐footed Shearwater populations are declining, and current conservation measures aimed primarily at bycatch mitigation are not restoring populations. Widespread shifts in foraging, as shown here, may explain some of the reported decline. An improved understanding and ability to mitigate the impacts of global climactic changes is therefore critical to the long‐term sustainability of this declining species.     

Niche dynamics of sympatric non-breeding shearwaters under varying prey availability

Variation in prey availability can cause changes in species interactions among marine predators. Foraging theory predicts that niche breadth will expand when resources become limited, possibly leading to higher niche overlap among sympatric species; however, a species’ niche can become constrained by interactions with other similar species, resulting in an inability to shift niche breadth or position. In coastal Newfoundland, Capelin Mallotus villosus is the main forage fish species and its availability (i.e. biomass) during the summer has varied considerably following a population collapse in the 1990s. During the summer, non-breeding Great and Sooty Shearwaters Ardenna gravis and A. grisea migrate and aggregate at annually persistent Capelin spawning sites. We used stable isotope ratios (δ¹³C, δ¹⁵N) of blood components (plasma, red blood cells) to investigate variation in isotopic niche breadth (95% prediction ellipse areas) and overlap of the two shearwater species during 2014, 2015 and 2016. Capelin availability varied among years, illustrated by lower peak biomass in 2015 (0.126 g/m²) and 2016 (0.027 g/m²) relative to 2014 (0.254 g/m²). The isotopic niche breadth (plasma) of both shearwater species expanded similarly from 2014 (0.65–0.66‰²) to 2015 (2.22–2.57‰²) and 2016 (1.15–1.42‰²), suggesting the incorporation of alternative prey types into their diet during years of lower prey availability. Isotopic niche overlap between Great and Sooty Shearwaters remained high across years (44–63%), however, providing little evidence for dietary niche partitioning during years of lower prey availability. Findings suggest that both shearwater species are flexible foragers and can modify their diet during the non-breeding season to accommodate fluctuations in prey availability.     

THE MICROSCOPIC AND IMMUNOHISTOLOGIC ANATOMY OF THE ENDOCRINE PANCREAS OF PYGMY AND DWARF SPERM WHALES (KOGIIDAE)

Histologic studies of pancreatic tissues of one pygmy sperm whale, Kiogia breviceps , and one dwarf sperm whale, K. simus , demonstrated rather typical exocrine pancreatic anatomy. Peroxidase-antiperoxidase (PAP) techniques determined that the cell composition of the islets of Langerhans resembled that of other mammals. Within islets, cells secreting insulin (B-cells) and glucagon (A-cells), were clearly demonstrated, but, surprisingly, isolated A- and B-cells were also found among pancreatic acinar cells. PAP techniques demonstrated the presence of neuron-specific enolase within islets, but failed to provide a sufficiently clear reaction to demonstrate the presence of somarostatin-producing D-cells. No positive PAP reaction for serotonin occurred.     

Stable isotope records of sei whale baleens from Chilean Patagonia as archives for feeding and migration behavior

Carbon (δ¹³C) and nitrogen (δ¹⁵N) stable isotope variations in baleen plates of sei whales (Balaenoptera borealis) stranded after a mass mortality event in Chilean Patagonia were investigated to assess potential dietary and migratory patterns. Carbon and nitrogen isotope ratios of seven baleens from six individuals were analyzed. The δ¹³C values ranged from ? 19.1 to ? 15.9‰ and the δ¹⁵N values from 8.7 to 15.4‰. Variations of up to 2.9‰ for δ¹³C and 5.3‰ for δ¹⁵N were observed within one baleen. Carbon and nitrogen isotope records of each baleen were significantly correlated and showed recurring oscillations confirmed by wavelet analyses. Oscillations slightly differed in periodicity indicating variable baleen growth rates between 10.0 and 16.5 cm/year. Food sources of the whales are discussed in terms of available isotope data for potential prey taxa and potential migratory behavior on the basis of latitudinal isotope gradients of particulate organic matter. Cyclicity could be explained by regular migrations of the sei whales from subtropical calving areas to high‐latitude foraging grounds. δ¹⁵N records of baleens differed between individuals eventually pointing to diverse feeding and migratory preferences among sei whale individuals.     

Dietary overlap and seasonality in three species of mormoopid bats from a tropical dry forest

Competing hypotheses explaining species’ use of resources have been advanced. Resource limitations in habitat and/or food are factors that affect assemblages of species. These limitations could drive the evolution of morphological and/or behavioural specialization, permitting the coexistence of closely related species through resource partitioning and niche differentiation. Alternatively, when resources are unlimited, fluctuations in resources availability will cause concomitant shifts in resource use regardless of species identity. Here, we used next‐generation sequencing to test these hypotheses and characterize the diversity, overlap and seasonal variation in the diet of three species of insectivorous bats of the genus Pteronotus. We identified 465 prey (MOTUs) in the guano of 192 individuals. Lepidoptera and Diptera represented the most consumed insect orders. Diet of bats exhibited a moderate level of overlap, with the highest value between Pteronotus parnellii and Pteronotus personatus in the wet season. We found higher dietary overlap between species during the same seasons than within any single species across seasons. This suggests that diets of the three species are driven more by prey availability than by any particular predator‐specific characteristic. P. davyi and P. personatus increased their dietary breadth during the dry season, whereas P. parnellii diet was broader and had the highest effective number of prey species in all seasons. This supports the existence of dietary flexibility in generalist bats and dietary niche overlapping among groups of closely related species in highly seasonal ecosystems. Moreover, the abundance and availability of insect prey may drive the diet of insectivores.