A Cluster-Based Web System Providing Differentiated and Guaranteed Services

In a world where many users rely on the Web for up-to-date personal and business information and transactions, it is fundamental to build Web systems that allow service providers to differentiate user expectations with multi-class Service Level Agreements (SLAs). In this paper we focus on the server components of the Web, by implementing QoS principles in a Web-server cluster that is, an architecture composed by multiple servers and one front-end node called Web switch. We first propose a methodology to determine a set of confident SLAs in a real Web cluster for multiple classes of users and services. We then decide to implement at the Web switch level all mechanisms that transform a best-effort Web cluster into a QoS-enhanced system. We also compare three QoS-aware policies through experimental results in a real test-bed system. We show that the policy implementing all QoS principles allows a Web content provider to guarantee the contractual SLA targets also in severe load conditions. Other algorithms lacking some QoS principles cannot be used for respecting SLA constraints although they provide acceptable performance for some load and system conditions.     

Content-Aware Dispatching Algorithms for Cluster-Based Web Servers

Cluster-based Web servers are leading architectures for highly accessed Web sites. The most common Web cluster architecture consists of replicated server nodes and a Web switch that routes client requests among the nodes. In this paper, we consider content-aware Web switches that can use application level information to assign client requests. We evaluate the performance of some representative state-of-the-art dispatching algorithms for Web switches operating at layer 7 of the OSI protocol stack. Specifically, we consider dispatching algorithms that use only client information as well as the combination of client and server information for load sharing, reference locality or service partitioning. We demonstrate through a wide set of simulation experiments that dispatching policies aiming to improve locality in server caches give best results for traditional Web publishing sites providing static information and some simple database searches. On the other hand, when we consider more recent Web sites providing dynamic and secure services, dispatching policies that aim to share the load are the most effective.     

On-line self-checking of replication consistency for autonomic computing

In this paper we are concerned with the live verification of the consistency of a replicated system, an issue that has not been addressed by the research community so far. We consider the problem of how to enable the system to detect automatically and in production whether the invariants defining the correctness of object replication are violated. This feature could greatly improve the dependability of distributed applications and is necessary for constructing self-managing and self-healing replicated systems. We focus on systems that enforce strongly consistent replication: all replicas of each object must be kept “continuously” in-sync. This replication strategy is appropriate for application domains where correctness guarantees in spite of failures are more important than performance and scalability. We present the design and implementation of a replicated web service capable of self-checking whether all replicas are indeed kept in sync. This check occurs on-line, transparently to clients. We also discuss the performance cost of self-checking in our prototype. Alberto Bartoli is Associate Professor of Computer Engineering at the University of Trieste, Italy. He took a degree in Electrical Engineering in 1989 and a doctorate in Computer Engineering in 1994, both at the University of Pisa, Italy. His research interests are in the area of reliability and fault-tolerance in distributed systems. Giovanni Masarin took a degree in Electronic Engineering in 2004, at the University of Trieste, Italy. He is currently involved in product development at RadioTrevisan, a company specialized in the production of lawful interception equipments.     

AWSCS-A System to Evaluate Different Approaches for the Automatic Composition and Execution of Web Services Flows

This paper proposes a system named AWSCS (Automatic Web Service Composition System) to evaluate different approaches for automatic composition of Web services, based on QoS parameters that are measured at execution time. The AWSCS is a system to implement different approaches for automatic composition of Web services and also to execute the resulting flows from these approaches. Aiming at demonstrating the results of this paper, a scenario was developed, where empirical flows were built to demonstrate the operation of AWSCS, since algorithms for automatic composition are not readily available to test. The results allow us to study the behaviour of running composite Web services, when flows with the same functionality but different problem-solving strategies were compared. Furthermore, we observed that the influence of the load applied on the running system as the type of load submitted to the system is an important factor to define which approach for the Web service composition can achieve the best performance in production.     

Design of user-centric semantic rights model for validation of user-generated content

In these days, the creative user really enjoys creating digital items and sharing their works with other people on the Web. Most users, who create digital contents, want to make secured packages of their works and distribute them with the attachment of valid licenses. Current digital rights management (DRM) systems, however, do not provide the functionality that supports the requirement of the creative users who are considered as just consumers by the current available DRM systems. To make the user-centric DRM functionality possible, we found that license management should be more intelligent to enable users make appropriate licenses for the secured distribution of their created works. In this paper, we define the semantic-based rights expression and management model for the user generated content. Each user created content can have one or more licenses with different types, reproduction, distribution, and usage. Based on our semantic license model and big data analytics, we can support a new business model in which users can sell and buy their created digital items in a secure environment.     

Evolution and assessment of colour patterns in stream-resident and anadromous male threespine stickleback Gasterosteus aculeatus from three regions

We compared the colour patterns of free swimming, reproductively active male threespine stickleback Gasterosteus aculeatus of the anadromous and stream ecotypes from three geographically distinct regions. Consistent with the hypothesis of environmentally mediated selection, our results indicate ecologically replicated differences in G. aculeatus coloration between anadromous and stream-resident populations, and that G. aculeatus probably have the visual acuity to discriminate colour pattern differences between anadromous and stream-resident fish.     

Web-Based Chronobiological Analysis

In this paper we describe a computer application that allows users from all over the world to perform chronobiological analyses with popular Internet browsers. Our application is based on the client-server philosophy, and it has been designed so as to minimize the network resources and connections to be used. Presently, our application includes several well-known data analysis techniques, mainly, that known as the cosinor method and those related. All the problems concerning security restrictions are solved, so that the user can have a real interactive chronobiological application.     

Multiple Regenerative Strategies of Short-Lived Species: An Effect on Geographical Distribution, Preference of Human-Made Habitats and Invasive Status

It is expected that plant species with multiple regenerative strategies have a wider ecological amplitude and geographical distribution. However there is still an anxious question why species with multiple regenerative strategies are not more frequent. In the presented work we asked whether short-lived plants with a potential bud bank i) have a wider geographical distribution, ii) occur more frequently in human-made habitats and iii) more frequently possess invasive status in comparison with the short-lived species without this additional regenerative strategy. Results show that short-lived plants with a potential bud bank are i) more widely geographically distributed, ii) under-represented in natural habitats and weakly over-represented in habitats disturbed by human activities and iii) contrary to expectation, less numerous among neophytes than species without a potential bud bank. This suggests that short-lived root-sprouters are more habitat-specialized when compared with such plants without adventitious bud-bank formation, but are more widely geographically distributed. A higher frequency of multiple regeneration strategies seems to be restricted by costs of having this ability in habitats or situations without a disturbance regime.     

BAHD superfamily of acyl-CoA dependent acyltransferases in <Emphasis Type="Italic">Populus</Emphasis> and <Emphasis Type="Italic">Arabidopsis</Emphasis>: bioinformatics and gene expression

Plant acyl-CoA dependent acyltransferases constitute a large specific protein superfamily, named BAHD. Using the conserved sequence motifs of BAHD members, we searched the genome sequences of Populus and Arabidopsis, and identified, respectively, 94- and 61-putative genes. Subsequently, we analyzed the phylogeny, gene structure, and chromosomal distribution of BAHD members of both species; then, we profiled expression patterns of BAHD genes by “in silico” northern- and microarray-analyses based on public databases, and by RT-PCR. While our genomic- and bioinformatic- analyses provided full sets of BAHD superfamily genes, and cleaned up a few existing annotation errors, importantly it led to our recognizing several unique Arabidopsis BAHD genes that inversely overlapped with their neighboring genes on the genome, and disclosing a potential natural anti-sense regulation for gene expressions. Systemic gene-expression profiling of BAHD members revealed distinct tissue-specific/preferential expression patterns, indicating their diverse biological functions. Our study affords a strong knowledge base for understanding BAHD members’ evolutionary relationships and gene functions implicated in plant growth, development and metabolism. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Evaluation of site availability exploitation towards performance optimization in data grids

Data in distributed systems are often replicated into different storage elements in order to facilitate their access. This allows optimizing execution time and bandwidth consumption, ensures load balancing and increases data availability and quality of service. Several replication strategies have then been proposed in the literature. In this work, a new evaluation metric for replication strategies is introduced and experimentally evaluated. This metric, called SAvE, serves to tackle a key feature, although neglected in the literature, which is the ability of a replication strategy to exploit the most available sites in the system. The design of such a metric requires an accurate determination of the availability degree of each site. A new measurement of site availability, denoted SA, is then designed to be integrated into SAvE while overcoming the drawbacks experienced by existing measurements. Extensive experiments are performed using the OptorSim simulator to show the accuracy and the effectiveness of our contributions.     

Contrasting responses of Peromyscus mice of Yosemite National Park to recent climate change

Accurately predicting the response of species to climate change is crucial for the preservation of contemporary species diversity. In the current study, we analyze the response of two congeneric small mammal species (Peromyscus maniculatus and Peromyscus truei) to recent climate change in the region of Yosemite National Park (California, USA). The generalist P. maniculatus did not change its distribution in response to climate change while the specialist P. truei substantially changed its geographic and elevational distribution in the region, expanding into Yosemite. Using molecular genetic techniques we found that a cryptic geographic shift in genetic variation may have occurred within the geographically stable P. maniculatus distribution. Using a combination of morphometric and molecular genetic techniques we confirmed that a P. truei subspecies previously identified as a habitat specialist expanded into new habitat types, suggesting that this subspecies is not in fact a habitat specialist. Instead, we propose that the range of this subspecies is instead limited by climatic variables currently varying in response to contemporary climate change. These results underscore the importance of verifying the natural‐history‐based assumptions used to develop predictive models of species' response to climate change.     

Geographic and seasonal variability in feeding behaviour of a small herbivorous rodent

Foraging strategies have traditionally been modelled as a result of food selection in response to one factor, as for instance resource availability, deterrent compounds or nutrients. Thus, a trade-off is assumed between plasticity (generalist strategy) and efficiency (specialist strategy). Nevertheless, several studies have demonstrated that animals cope behaviourally with food supply variation. For instance, desert-dwelling rodents partially compensate for nutritional bottlenecks through diet selection. The aim of our study was to test how foraging behaviour matches spatial and temporal variations in the trophic environment and how modelling hypotheses help us to understand the resultant foraging strategy. Our animal study model was the small cavy Microcavia australis, a widely distributed herbivorous rodent. Fieldwork was carried out in four places, in wet and dry seasons. We found significant differences in plant cover, plant diversity and niche breadth, and diet selection revealed a complex foraging strategy. M. australis shows a behavioural repertoire that exceeds single-criterion categories; therefore, we appeal to theoretical models that consider ecological and physiological perspectives. We classified the small cavy as a facultative specialist displaying a thoroughly opportunistic strategy based on the plasticity of the behavioural phenotype. We finally discuss the evolutionary relevance of our results and propose further investigation avenues.     

敦煌阳关湿地芦苇克隆构件空间拓展策略及其对土壤环境因子的响应

空间拓展是克隆植物响应环境的生态适应和权衡维度,以内陆盐沼湿地典型代表敦煌阳关国家级自然保护区内的芦苇(Phragmites australis)为研究对象,基于水库距离远近和芦苇种群的密度与盖度,设置了近水区(500 m)、过渡区(1500 m)、荒漠区(2500 m)3个不同的采样梯度,研究了环境异质条件下芦苇克隆构件空间拓展策略及其对土壤环境因子的响应。结果表明:(1)芦苇克隆构件在异质环境条件下差异显著,初级根茎条数、根茎节间长、间隔子长、分枝角度呈现"同增同涨"的协同进化关系(P0.01),而与分株数呈现"此消彼长"的权衡关系(P0.01)。(2)且随着种群的密度降低,芦苇在空间拓展过程中呈现从"密集型"转"游击型"的生存策略。(3)冗余分析显示土壤水分、pH值、盐分是克隆构件空间拓展的主要驱动力,其中各层土壤水分、深层土壤pH值和盐分是芦苇空间拓展最重要的环境因子。明晰内陆河湿地芦苇克隆构件空间拓展策略及主要的环境驱动力,能为干旱脆弱敏感区湿地保护和生态恢复提供借鉴意义。     

Low concordance of short‐term and long‐term selection responses in experimental Drosophila populations

Experimental evolution is becoming a popular approach to study the genomic selection response of evolving populations. Computer simulation studies suggest that the accuracy of the signature increases with the duration of the experiment. Since some assumptions of the computer simulations may be violated, it is important to scrutinize the influence of the experimental duration with real data. Here, we use a highly replicated Evolve and Resequence study in Drosophila simulans to compare the selection targets inferred at different time points. At each time point, approximately the same number of SNPs deviates from neutral expectations, but only 10% of the selected haplotype blocks identified from the full data set can be detected after 20 generations. Those haplotype blocks that emerge already after 20 generations differ from the others by being strongly selected at the beginning of the experiment and display a more parallel selection response. Consistent with previous computer simulations, our results demonstrate that only Evolve and Resequence experiments with a sufficient number of generations can characterize complex adaptive architectures.     

Content Delivery Policies in Replicated Web Services: Client-Side vs. Server-Side

Replication of Web Services has an important role among techniques that have been developed in order to meet the demand for faster and more efficient access to the Internet. Replication can be addressed both by a cluster of servers, and by servers geographically distributed in the Internet. In this paper, we focus on geographical replication. Two approaches are commonly used for geographical replication: server-side and client-side. In the client-side approach, the client has a significant role in the policy used to exploit Web Service Replication. In the server-side approach, the client transparently exploits a Replicated Web Service. Both server-side and client-side approaches provide various strategies that can be adopted. An analysis of these strategies, and an overall classification, is presented here. Finally, client-side and server-side approaches are compared, identifying their pros and cons in order to propose the features of an eventual complete approach.     

Effect of long-term organic and mineral fertilization strategies on rhizosphere microbiota assemblage and performance of lettuce

Long-term agricultural fertilization strategies gradually change soil properties including the associated microbial communities. Cultivated crops recruit beneficial microbes from the surrounding soil environment via root exudates. In this study, we aimed to investigate the effects of long-term fertilization strategies across field sites on the rhizosphere prokaryotic (Bacteria and Archaea) community composition and plant performance. We conducted growth chamber experiments with lettuce (Lactuca sativa L.) cultivated in soils from two long-term field experiments, each of which compared organic versus mineral fertilization strategies. 16S rRNA gene amplicon sequencing revealed the assemblage of a rhizosphere core microbiota shared in all lettuce plants across soils, going beyond differences in community composition depending on field site and fertilization strategies. The enhanced expression of several plant genes with roles in oxidative and biotic stress signalling pathways in lettuce grown in soils with organic indicates an induced physiological status in plants. Lettuce plants grown in soils with different fertilization histories were visibly free of stress symptoms and achieved comparable biomass. This suggests a positive aboveground plant response to belowground plant–microbe interactions in the rhizosphere. Besides effects of fertilization strategy and field site, our results demonstrate the crucial role of the plant in driving rhizosphere microbiota assemblage.     

The Relationship between Therapeutic Alliance and Service User Satisfaction in Mental Health Inpatient Wards and Crisis House Alternatives: A Cross-Sectional Study

Background

Poor service user experiences are often reported on mental health inpatient wards. Crisis houses are an alternative, but evidence is limited. This paper investigates therapeutic alliances in acute wards and crisis houses, exploring how far stronger therapeutic alliance may underlie greater client satisfaction in crisis houses.

Methods and Findings

Mixed methods were used. In the quantitative component, 108 crisis house and 247 acute ward service users responded to measures of satisfaction, therapeutic relationships, informal peer support, recovery and negative events experienced during the admission. Linear regressions were conducted to estimate the association between service setting and measures, and to model the factors associated with satisfaction. Qualitative interviews exploring therapeutic alliances were conducted with service users and staff in each setting and analysed thematically.

Results

We found that therapeutic alliances, service user satisfaction and informal peer support were greater in crisis houses than on acute wards, whilst self-rated recovery and numbers of negative events were lower. Adjusted multivariable analyses suggest that therapeutic relationships, informal peer support and negative experiences related to staff may be important factors in accounting for greater satisfaction in crisis houses. Qualitative results suggest factors that influence therapeutic alliances include service user perceptions of basic human qualities such as kindness and empathy in staff and, at service level, the extent of loss of liberty and autonomy.

Conclusions and Implications

We found that service users experience better therapeutic relationships and higher satisfaction in crisis houses compared to acute wards, although we cannot exclude the possibility that differences in service user characteristics contribute to this. This finding provides some support for the expansion of crisis house provision. Further research is needed to investigate why acute ward service users experience a lack of compassion and humanity from ward staff and how this could be changed.     

Sustainable Cost Models for mHealth at Scale: Modeling Program Data from m4RH Tanzania

Background

There is increasing evidence that mobile phone health interventions (“mHealth”) can improve health behaviors and outcomes and are critically important in low-resource, low-access settings. However, the majority of mHealth programs in developing countries fail to reach scale. One reason may be the challenge of developing financially sustainable programs. The goal of this paper is to explore strategies for mHealth program sustainability and develop cost-recovery models for program implementers using 2014 operational program data from Mobile for Reproductive Health (m4RH), a national text-message (SMS) based health communication service in Tanzania.

Methods

We delineated 2014 m4RH program costs and considered three strategies for cost-recovery for the m4RH program: user pay-for-service, SMS cost reduction, and strategic partnerships. These inputs were used to develop four different cost-recovery scenarios. The four scenarios leveraged strategic partnerships to reduce per-SMS program costs and create per-SMS program revenue and varied the structure for user financial contribution. Finally, we conducted break-even and uncertainty analyses to evaluate the costs and revenues of these models at the 2014 user volume (125,320) and at any possible break-even volume.

Results

In three of four scenarios, costs exceeded revenue by $94,596, $34,443, and $84,571 at the 2014 user volume. However, these costs represented large reductions (54%, 83%, and 58%, respectively) from the 2014 program cost of $203,475. Scenario four, in which the lowest per-SMS rate ($0.01 per SMS) was negotiated and users paid for all m4RH SMS sent or received, achieved a $5,660 profit at the 2014 user volume. A Monte Carlo uncertainty analysis demonstrated that break-even points were driven by user volume rather than variations in program costs.

Conclusions

These results reveal that breaking even was only probable when all SMS costs were transferred to users and the lowest per-SMS cost was negotiated with telecom partners. While this strategy was sustainable for the implementer, a central concern is that health information may not reach those who are too poor to pay, limiting the program’s reach and impact. Incorporating strategies presented here may make mHealth programs more appealing to funders and investors but need further consideration to balance sustainability, scale, and impact.