敲除aceE基因对猪链球菌丙酮酸代谢的影响

【目的】探究缺失编码丙酮酸脱氢酶蛋白的aceE基因对猪链球菌生长特性、三羧酸循环和丙酮酸代谢的影响。【方法】通过测量菌液的OD600值,绘制野生型菌株与aceE基因缺失突变株的生长曲线;利用试剂盒测定三羧酸循环和丙酮酸代谢旁路中乙酰CoA、琥珀酸CoA、延胡索酸、草酰乙酸、丙酮酸、乳酸和ATP的含量,通过荧光定量qRT-PCR确定柠檬酸合酶基因、苹果酸脱氢酶基因、琥珀酸脱氢酶基因、异柠檬酸脱氢酶基因、丙酮酸脱羧酶基因、乳酸脱氢酶基因、乙醇脱氢酶基因和乙醛脱氢酶基因的表达水平。【结果】与野生株相比,菌株ΔaceE在平台期OD600值下降;添加1g/L乙酸盐能够显著提升菌株ΔaceE平台期OD600值。菌株ΔaceE的丙酮酸含量上升,ATP含量下降;三羧酸循环代谢中乙酰CoA、琥珀酸CoA、延胡索酸含量降低;柠檬酸合酶基因和苹果酸脱氢酶基因表达水平上升,琥珀酸脱氢酶基因和异柠檬酸脱氢酶基因表达水平下调;在丙酮酸代谢旁路中丙酮酸脱羧酶基因、乳酸脱氢酶基因、乙醇脱氢酶基因和乙醛脱氢酶基因表达水平上升。【结论】结果显示,菌株ΔaceE三羧酸循环活性降低,虽然能够通过PDH旁路将部分丙酮酸分解为乙...     

光滑球拟酵母中α-酮戊二酸脱氢酶系生理作用解析

[目的]研究α-酮戊二酸脱氢酶系在光滑球拟酵母碳代谢流、能量代谢和氨基酸代谢中的生理作用.[方法]通过敲除光滑球拟酵母中编码α-酮戊二酸脱氢酶系中E1酶的基因kgd1,构建α-酮戊二酸脱氢酶活性缺失菌株T.glabrata kgd1::kan,并考察KGDH缺失引起TCA循环关键酶活性,碳代谢流量以及胞内氨基酸和能荷水平等方面的变化.[结果]光滑球拟酵母中α-酮戊二酸脱氢酶活性的缺失导致:(1)细胞启动乙醛酸途径,通过形成TCA-乙醛酸循环实现TCA循环的正常代谢;(2)胞内NADH/NAD+水平下降33.7%,ATP/ADP水平下降31.8%,而与NADH代谢相关的丙酮酸脱氢酶、异柠檬酸脱氢酶和苹果酸脱氢酶的活性分别提高58.1%、33.3%和32.5%;(3)胞内丙酮酸含量下降50.1%,而胞内琥珀酸、苹果酸和α-酮戊二酸含量则分别增加了172.7%、66.1%和41.1%;(4)丙酮酸族氨基酸含量下降29.3%,而胞内谷氨酸族氨基酸和天冬氨酸族氨基酸含量则提高了34.7%和26.8%.[结论]上述研究结果表明,α-酮戊二酸脱氢酶系在微生物细胞中心碳代谢、能量代谢和氨基酸代谢中发挥着重要作用.     

TCA循环中间产物对酿酒酵母胞内代谢关键酶活性的影响

对酿酒酵母在添加苹果酸、柠檬酸和琥珀酸的混合培养基与其在YEPD培养基中胞内丙酮酸激酶、葡萄糖-6-磷酸脱氢酶、异柠檬酸脱氢酶、苹果酸脱氢酶、乙醇脱氢酶的酶活力差异进行了对比分析。结果表明:添加苹果酸使胞内丙酮酸激酶、异柠檬酸脱氢酶、苹果酸脱氢酶、乙醇脱氢酶的酶活分别下降34.82%、57.23%、39.15%、12.10%;添加柠檬酸使胞内丙酮酸激酶、异柠檬酸脱氢酶、苹果酸脱氢酶的酶活分别下降50.17%、42.20%、48.40%;添加琥珀酸使胞内丙酮酸激酶、葡萄糖-6-磷酸脱氢酶、异柠檬酸脱氢酶、苹果酸脱氢酶、乙醇脱氢酶的酶活分别下降34.16%、34.16%、50.87%、50.87%、12.37%。丙酮酸激酶、异柠檬酸脱氢酶和苹果酸脱氢酶对3种有机酸的耐受性较差,葡萄糖-6-磷酸脱氢酶、乙醇脱氢酶对3种有机酸的耐受具有选择性。     

产丁二酸谷氨酸棒状杆菌基因缺失代谢工程菌株的构建

【目的】提高谷氨酸棒状杆菌(Corynebacterium glutamicum)ATCC13032厌氧条件下的丁二酸产量,并降低发酵产物中副产物的含量。【方法】以谷氨酸棒状杆菌(Corynebacterium glutamicum)ATCC13032为出发菌,首先敲除乳酸形成的关键酶乳酸脱氢酶基因(ldh),构建ldh缺失株谷氨酸棒状杆菌ATCC13032Δldh;然后以缺失株谷氨酸棒状杆菌ATCC13032Δldh为出发菌,敲除该菌的丙酮酸脱氢酶系的E1p酶基因(aceE),构建一株双缺失突变菌株谷氨酸棒状杆菌ATCC13032ΔldhΔaceE。【结果】与供试菌比较,谷氨酸棒状杆菌ATCC13032Δldh的丁二酸产量和转化率分别提高了94.9%和32%,并且主要的副产物乳酸产量由出发菌产量的63.5 g/L降低到很微量的程度。丙酮酸脱氢酶的失活并不能完全消除副产物乙酸的形成,但乙酸的产量较ATCC13032Δldh降低了37.9%,丁二酸的产量略有提高。【结论】该重组菌具有较强的丁二酸生产工业化潜力,并且该研究方法为微生物代谢育种提供参考。     

光滑球拟酵母中α-酮戊二酸脱氢酶系生理作用

摘要：【目的】研究α-酮戊二酸脱氢酶系在光滑球拟酵母碳代谢流、能量代谢和氨基酸代谢中的生理作用。【方法】通过敲除光滑球拟酵母中编码α-酮戊二酸脱氢酶系中E1酶的基因kgd1,构建α-酮戊二酸脱氢酶活性缺失菌株T. glabrata kgd1::kan,并考察KGDH缺失引起TCA循环关键酶活性,碳代谢流量以及胞内氨基酸和能荷水平等方面的变化。【结果】光滑球拟酵母中α-酮戊二酸脱氢酶活性的缺失导致：(1)细胞启动乙醛酸途径,通过形成TCA-乙醛酸循环实现TCA循环的正常代谢;(2)胞内NADH/NAD+水平     

过表达基因elo1和ole1增强光滑球拟酵母Δmed15B菌株的低pH耐受能力

[目的] 研究中介体亚基Med15B（ORF CAGL0H06215g）介导的脂肪酸代谢影响光滑球拟酵母（Candida glabrata）耐受低pH胁迫的生理机制。[方法] 在菌株Δmed15B中过量表达脂肪酸延伸酶基因elo1（ORF CAGL0L08184g）和Δ9去饱和酶基因ole1（ORF CAGL0I00418g）,构建过表达菌株Δmed15B/elo1-ole1,然后与菌株Δmed15B和亲本菌株ATCC55对比分析基因elo1和ole1的表达水平、脂肪酸组分比例、细胞膜完整性和耐受能力在pH 2.0和pH 6.0条件下的差异。[结果] 发现,在pH 2.0条件下过表达菌株Δmed15B/elo1-ole1：（1）基因elo1和ole1表达水平比菌株Δmed15B分别上调了4.1倍和3.3倍,与亲本菌株ATCC55相比分别上调了2.5倍和2.2倍;（2）脂肪酸平均链长延长至17.4,高于菌株Δmed15B的16.8和亲本菌株ATCC55的17.1;不饱和脂肪酸与饱和脂肪酸的比值比菌株Δmed15B和亲本菌株ATCC55分别提高了53.1%和41.5%;（3）碘化丙啶（PI）染色细胞数占总检测细胞数的比例,与菌株Δmed15B和亲本菌株ATCC55比较分别下降了60.8%和37.7%;（4）细胞半抑制pH（胁迫）（IC₅₀）值达到pH 2.3,比菌株Δmed15B的pH 3.7和亲本菌株ATCC55的pH 3.1具有更强的耐受能力。[结论] 在菌株Δmed15B中过表达基因elo1和ole1能通过提高长链脂肪酸和不饱和脂肪酸含量,增强细胞对低pH胁迫的耐受能力。     

辅助能量物质强化环磷酸腺苷发酵合成机制

微生物代谢过程中,环磷酸腺苷(cAMP)由ATP直接环化形成,强化ATP合成有利于产物的积累。在分批发酵24h添加3g/L-broth丙酮酸钠(辅助能量物质),cAMP浓度达到4. 13g/L,比对照批次提高了24. 4%,发酵性能得到明显改善。对关键酶活性及能量代谢水平的测定结果表明,由于丙酮酸钠的添加,丙酮酸激酶的活性显著下降,而6-磷酸葡萄糖脱氢酶、琥珀腺苷酸合成酶和腺苷酸环化酶等产物合成途径中酶的活性均明显提高;异柠檬酸脱氢酶、琥珀酸脱氢酶和呼吸链脱氢酶等酶活性,以及辅因子NADH/NAD+、ATP/AMP均明显提高。表明添加丙酮酸钠改变了糖酵解和磷酸戊糖途径间的碳流分配,使更多碳流向产物合成途径,同时提高了整体能量代谢水平,更利于ATP的生成,为产物的合成提供了物质和能量基础,进而促进了cAMP的合成与积累。     

磷酸烯醇式丙酮酸羧化酶基因的敲除对于谷氨酸棒杆菌V1生理代谢的影响

【目的】L-缬氨酸生物合成的前体物质是丙酮酸。为了增加磷酸烯醇式丙酮酸向丙酮酸的代谢流向,优化L-缬氨酸前体物质的供应,以一株积累L-缬氨酸的谷氨酸棒杆菌V1(Corynebacterium glutamicum V1)为对象,构建磷酸烯醇式丙酮酸羧化酶(PEPC)基因敲除的重组菌株C.glutamicum V1-Δpepc,并研究pepc敲除后菌株生理特性的改变。【方法】运用交叉PCR方法得到pepc基因内部缺失的同源片段Δpepc,并构建敲除质粒pK18mobsacB-Δpepc。利用同源重组技术获得pepc基因缺陷突变株C.glutamicum V1-Δpepc。采用摇瓶发酵对C.glutamicum V1-Δpepc进行发酵特性的研究。对谷氨酸棒杆菌模式菌株C.glutamicum ATCC 13032、出发菌株C.glutamicum V1和敲除菌株C.glu-tamicum V1-Δpepc的丙酮酸激酶(Pyruvate kinase,PK)、丙酮酸脱氢酶(Pyruvate dehydro-genase,PDH)、丙酮酸羧化酶(Pyruvate carboxylase,PC)分别进行测定和分析。【结果】PCR验证以及PEPC酶活测定都表明筛选到pepc缺陷的突变菌株C.glutamicum V1-Δpepc,摇瓶发酵结果表明,突变菌株C.glutamicum V1-Δpepc不再积累L-缬氨酸而是积累L-精氨酸达到7.48 g/L。酶活测定结果表明出发菌株的PDH和PC酶活均低于模式菌株C.glu-tamicum ATCC13032和重组菌株C.glutamicum V1-Δpepc,出发菌株的PK与PEPC酶活与模式菌株没有较大的差异。【结论】研究表明,通过切断PEPC参与的三羧酸循环的回补途径,增加磷酸烯醇式丙酮酸向丙酮酸的流向使丙酮酸向TCA循环的流量增加,精氨酸的累积量提高。同时,以丙酮酸为前体的L-缬氨酸和丙氨酸的积累量降低。     

土壤紧实胁迫对黄瓜根系呼吸代谢的影响

用容重分别为1.20和1.55 g· cm-3的土壤进行盆栽试验,研究了土壤紧实胁迫对‘津春4号'黄瓜根系呼吸代谢的影响.结果表明:土壤紧实胁迫条件下,黄瓜根系中丙酮酸脱羧酶、乙醇脱氢酶和乳酸脱氢酶活性显著提高;无氧呼吸主要产物(乙醇、乙醛和乳酸)含量显著升高;参与有氧呼吸的苹果酸脱氢酶、琥珀酸脱氢酶和异柠檬酸脱氢酶活性显著下降,丙酮酸和琥珀酸含量显著提高,苹果酸含量显著下降.说明在土壤紧实胁迫条件下,黄瓜根系的有氧呼吸受到显著抑制,无氧呼吸过程加强.     

土壤紧实胁迫对黄瓜根系呼吸代谢的影响

用容重分别为1.20和1.55 g·cm^-3的土壤进行盆栽试验,研究了土壤紧实胁迫对‘津春4号’黄瓜根系呼吸代谢的影响.结果表明: 土壤紧实胁迫条件下,黄瓜根系中丙酮酸脱羧酶、乙醇脱氢酶和乳酸脱氢酶活性显著提高;无氧呼吸主要产物(乙醇、乙醛和乳酸)含量显著升高;参与有氧呼吸的苹果酸脱氢酶、琥珀酸脱氢酶和异柠檬酸脱氢酶活性显著下降,丙酮酸和琥珀酸含量显著提高,苹果酸含量显著下降.说明在土壤紧实胁迫条件下,黄瓜根系的有氧呼吸受到显著抑制,无氧呼吸过程加强.     

Metabolic impact of redox cofactor perturbations in Saccharomyces cerevisiae

Redox cofactors play a pivotal role in coupling catabolism with anabolism and energy generation during metabolism. There exists a delicate balance in the intracellular level of these cofactors to ascertain an optimal metabolic output. Therefore, cofactors are emerging to be attractive targets to induce widespread changes in metabolism. We present a detailed analysis of the impact of perturbations in redox cofactors in the cytosol or mitochondria on glucose and energy metabolism in Saccharomyces cerevisiae to aid metabolic engineering decisions that involve cofactor engineering. We enhanced NADH oxidation by introducing NADH oxidase or alternative oxidase, its ATP-mediated conversion to NADPH using NADH kinase as well as the interconversion of NADH and NADPH independent of ATP by the soluble, non-proton-translocating bacterial transhydrogenase. Decreasing cytosolic NADH level lowered glycerol production, while decreasing mitochondrial NADH lowered ethanol production. However, when these reactions were coupled with NADPH production, the metabolic changes were more moderated. The direct consequence of these perturbations could be seen in the shift of the intracellular concentrations of the cofactors. The changes in product profile and intracellular metabolite levels were closely linked to the ATP requirement for biomass synthesis and the efficiency of oxidative phosphorylation, as estimated from a simple stoichiometric model. The results presented here will provide valuable insights for a quantitative understanding and prediction of cellular response to redox-based perturbations for metabolic engineering applications.     

Characterization of carbon metabolism in Opuntia ficus-indica Mill. exhibiting the idling mode of Crassulacean acid metabolism

Upon transfer from well-watered conditions to total drought, long-day-grown cladodes of Opuntia ficus-indica Mill. shift from full Crassulacean acid metabolism (CAM) to CAM-idling. Experiments using ¹⁴C-tracers were conducted in order to characterize the carbon-flow pattern in cladodes under both physiological situations. Tracer was applied by ¹⁴CO₂ fumigations and NaH¹⁴CO₃ injections during the day-night cycle. The results showed that behind the closed stomata, mesophyll cells of CAM-idling plants retained their full capacity to metabolize CO₂ in light and in darkness. Upon the induction of CAM-idling the level of the capacity of phosphoenolpyruvate carboxylase (EC 4.1.1.31) was maintained. By contrast, malate pools decreased, displaying finally only a small or no day-night oscillation. The capacity of NADP-malic enzyme (EC 1.1.1.40) decreased in parallel with the reduction in malate pools. Differences in the labelling patterns, as influenced by the mode of tracer application, are discussed.Abbreviations CAM Crassulacean acid metabolism - PEP-Case phosphoenolpyruvate carboxylase     

Enzymes from seeds of Phaseolus vulgaris L.: Hydroxylation of gibberellins A20 and A1 and 2,3-dehydrogenation of gibberellin A20

A time-course study is described relating the enzyme activities for GA₂₀ metabolism with seed development in Phaseolus vulgaris L. Enzyme activity for the 3-hydroxylation of GA₂₀ to GA₁, and for the 2,3-desaturation of GA₂₀ to GA₅, was confined to the cotyledons and showed maximal specific activity at 21 d after anthesis. These enzyme activities co-occurred, together with a much lower level of activity for the 2-hydroxylation of GA₂₀ to GA₂₉. The observed rates of GA₁, GA₅ and GA₂₉ formation from GA₂₀ were constant under a range of incubation conditions. Enzyme activity for the conversion of GA₁ to GA₈ was detected only in embryos of seed from 40 d after anthesis. By deuterium-labelling and analysis of the products by gas chromatography-selected ion monitoring it was shown that 2-hydroxylation of GA₁ to GA₈ and 3-hydroxylation of GA₂₀ to GA₁ occur with retention of configuration and that the conversion of GA₂₀ to GA₅ occurs with loss of the 2- and 3-hydrogens. These results establish that GA₁ is not formed from GA₂₀ via GA₅.Abbreviations GA_n Gibberellin A_n - GC gas chromatography - HPLC high-performance liquid chromatography - MS mass spectrometry - SIM selected-ion monitoring - THO tritiated water     

放线菌中亮氨酸应答调控蛋白的生物学功能及其调控机理

放线菌是一类革兰氏阳性细菌,可产生氨基酸等初级代谢产物和抗生素等次级代谢产物,其广泛用于食品、医药、添加剂及化妆品行业。此外,还有少数放线菌,如分枝杆菌等,是可以引起人和动植物病害的病原菌。亮氨酸应答调控蛋白(Leucine-responsive regulatory protein,Lrp)是一类在氨基酸代谢及其相关代谢过程中的重要转录调控子,能够应答各种氨基酸,参与调控微生物细胞的多个生理过程,例如氨基酸代谢和转运、中心代谢、细菌的持久性和毒力等。本文总结了放线菌Lrp的生物学功能,并综述了放线菌中不同种属Lrp以及天蓝色链霉菌和红色糖多孢菌Lrp调控机理的研究进展。     

Metabolism of [13C1]gibberellin A29 to [13C1]gibberellin-catabolite in maturing seeds of Pisum sativum cv. Progress No. 9

The metabolism of GA₂₉ during seed maturation in Pisum sativum cv. Progress No. 9 was further investigated. [17-¹³C₁]GA₂₉ was metabolised to a GA-catabolite (structure 3), with incorporation of the [¹³C] label from the GA₂₉ substrate into the GA-catabolite being demonstrated by GC-MS. Quantitation of the GA-catabolite using GC-MS was achieved by adding GA-catabolite, labelled with [¹⁸O], to seed extracts as an internal standard. At least 50% conversion of [¹³C₁]GA₂₉ to [¹³C₁]GA-catabolite was demonstrated with the build up of exogenous [¹³C₁]GA-catabolite strictly paralleling the accumulation of native GA-catabolite. These results strongly suggest that conversion of GA₂₉ to the GA-catabolite is a natural metabolic step occurring during the final stages of seed maturation. 25 g per seed of native GA-catabolite was recorded in 37 day old seeds. Some problems encountered in the analysis of extracts containing the GA-catabolite are discussed briefly.Abbreviations BSTFA bis(trifluoromethylsilyl)acetamide - GA_n gibberellin A_n - GC gas chromatography - GC-MS combined gas chromatography-mass spectrometry - Me methyl ester - SICM selected ion current monitoring - TMSi trimethylsilyl ether     

The regulation of carbohydrate metabolism in Klebsiella aerogenes NCTC 418 organisms,growing in chemostat culture

Klebsiella aerogenes NCTC 418 was grown in chemostat cultures (D=0.17 hr^-1; pH 6.8; 35° C) that were, successively, carbon-, sulphate-, ammonia-, and phosphate-limited, and which contained as the sole carbon-substrate first glucose, then glycerol, mannitol and lactate. Quantitative analyses of carbon-substrate used and products formed allowed carbon balances to be constructed and direct comparisons to be made of the effciency of substrate utilization. With all sixteen cultures, carbon recoveries of better than 90% were obtained.Optimum utilization of the carbon substrate was invariably found with the carbon-limited cultures, the sole products being organisms and carbon dioxide. But the extent to which excess substrate was over-utilized varied markedly with both the nature of the growth-limitation and the identity of the carbon-substrate. In general, sulphate-, ammonia-, and phosphate-limited cultures utilized glycerol more efficiently than mannitol, mannitol better than lactate, and glucose least efficiently. Glucose-containing cultures also synthesized some extracellular polysaccharide.When the carbon source was in excess, a range of acidic compounds generally were excreted. Sulphate-limited cultures, growing on glucose, excreted much pyruvate and acetate, whereas similarly-limited cultures growing on glycerol, mannitol or lactate produced only acetate. Ammonialimited cultures invariably excreted 2-oxoglutarate and acetate, whereas phosphate-limited cultures produced gluconic acid, 2-ketogluconic acid and acetate, when growing on glucose, but only acetate when growing on mannitol or lactate.From the rates of substrate and oxygen consumption, and the rates of cell synthesis, yield values for both substrate and oxygen were calculated. These showed different trends, but were similar in being highest under carbon-limitation and substantially lower under all other limitations.The physiological significance of these findings, and the probable nature of the regulatory mechanisms underlying overflow metabolism are discussed.     

Regulators of cell division in plant tissues

6-[³H]Benzylaminopurine was supplied through the transpiration stream to de-rooted Phaseolus vulgaris L. seedlings. The principal metabolite formed was identified as -(6-benzylaminopurin-9-yl)alanine by comparison with the synthetic compound.Abbreviations BAP 6-benzylaminopurine - TLC thin-layer chromatography XXVI=Letham et al. (1978)     

Fasting in the American marten (<Emphasis Type="Italic">Martes americana</Emphasis>): a physiological model of the adaptations of a lean-bodied animal

The American marten (Martes americana) is a boreal forest marten with low body adiposity throughout the year. The aim of this study was to investigate the adaptations of this lean-bodied species to fasting for an ecologically relevant duration (48 h) by exposing eight farm-bred animals to total food deprivation with seven control animals. Selected morphological and hematological parameters, plasma and serum biochemistry, endocrinological variables and liver and white adipose tissue (WAT) enzyme activities were determined. After 48 h without food, the marten were within phase II of fasting with depleted liver and muscle glycogen stores, but with active lipid mobilization indicated by the high lipase activities in several WAT depots. The plasma ghrelin concentrations were higher due to food deprivation, possibly increasing appetite and enhancing foraging behavior. The lower plasma insulin and higher cortisol concentrations could mediate augmented lipolysis and the lower triiodothyronine levels could suppress the metabolic rate. Fasting did not affect the plasma levels of stress-associated catecholamines or variables indicating tissue damage. In general, the adaptations to short-term fasting exhibited some differences compared to the related farm-bred American mink (Mustela vison), an example of which was the better ability of the marten to hydrolyze lipids despite its significantly lower initial fat mass.     

Interrelationships between carbohydrate metabolism and nitrogen assimilation in cultured plant cells

In sycamore cells grown on nitrate as opposed to glutamate there is a higher pentose phosphate pathway carbon flux relative to glycolysis in the early stages of cell growth when nitrate assimilation is most active. The high pentose phosphate pathway activity compared with glycolysis in nitrate grown cells is accompanied by enhanced levels of hexokinase, pyruvate kinase, glucose-6-phosphate de-hydrogenase, 6-phosphogluconate dehydrogenase and transketolase. There is no significant increase in activity of the solely glycolytic enzyme, phosphofructokinase. It is suggested that the increased pentose phosphate pathway activity in nitrate grown cells is correlated with a demand by nitrite assimilation for NADPH.II=Jessup and Fowler, 1976 b